AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0837630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0837630 MtrunA17_Chr5g0404291 92.390 657 23 1 1 657 1 630 0.0 1135
Msa0837630 MtrunA17_Chr6g0450161 59.253 589 197 7 70 651 48 600 0.0 681
Msa0837630 MtrunA17_Chr4g0039781 57.877 584 212 4 70 650 54 606 0.0 659
Msa0837630 MtrunA17_Chr4g0026631 27.600 250 154 4 370 615 118 344 3.85e-20 93.6
Msa0837630 MtrunA17_Chr2g0321241 27.027 259 162 5 361 615 114 349 7.81e-19 89.7
Msa0837630 MtrunA17_Chr4g0038101 30.415 217 114 8 414 623 758 944 2.97e-18 89.4
Msa0837630 MtrunA17_Chr3g0127431 36.842 152 89 5 413 559 120 269 8.62e-18 86.3
Msa0837630 MtrunA17_Chr7g0264521 30.806 211 113 8 409 611 510 695 7.36e-17 84.7
Msa0837630 MtrunA17_Chr7g0264521 30.049 203 112 7 414 611 242 419 4.11e-16 82.4
Msa0837630 MtrunA17_Chr8g0387641 29.612 206 116 4 414 614 557 738 8.96e-17 84.7
Msa0837630 MtrunA17_Chr3g0116131 30.622 209 110 7 414 614 939 1120 1.17e-16 84.3
Msa0837630 MtrunA17_Chr1g0192151 30.120 249 123 9 394 599 175 415 1.92e-16 82.0
Msa0837630 MtrunA17_Chr1g0180791 30.332 211 114 8 409 611 509 694 2.12e-16 83.2
Msa0837630 MtrunA17_Chr1g0180791 30.049 203 112 7 414 611 241 418 1.48e-15 80.5
Msa0837630 MtrunA17_Chr4g0014731 30.120 249 123 9 394 599 176 416 2.19e-16 82.0
Msa0837630 MtrunA17_Chr1g0204031 30.000 220 115 7 414 627 594 780 4.29e-16 82.4
Msa0837630 MtrunA17_Chr3g0127401 34.416 154 90 4 413 559 117 266 5.16e-16 80.5
Msa0837630 MtrunA17_Chr2g0289231 30.332 211 116 5 401 608 329 511 6.03e-16 81.6
Msa0837630 MtrunA17_Chr5g0397121 31.553 206 112 6 414 614 549 730 8.42e-16 81.6
Msa0837630 MtrunA17_Chr3g0141901 34.211 152 92 5 414 558 172 322 8.61e-16 80.1
Msa0837630 MtrunA17_Chr2g0327121 29.858 211 115 8 409 611 511 696 1.16e-15 80.9
Msa0837630 MtrunA17_Chr2g0327121 30.244 205 112 8 412 611 242 420 7.63e-14 75.1
Msa0837630 MtrunA17_Chr1g0195741 29.187 209 113 7 414 614 975 1156 1.25e-15 81.3
Msa0837630 MtrunA17_Chr4g0004121 27.143 210 118 5 414 612 277 462 2.02e-15 79.7
Msa0837630 MtrunA17_Chr3g0145011 34.211 152 92 5 414 558 175 325 2.05e-15 79.0
Msa0837630 MtrunA17_Chr1g0195731 29.187 209 113 7 414 614 971 1152 2.44e-15 80.1
Msa0837630 MtrunA17_Chr8g0345461 32.075 159 100 5 414 565 201 358 6.18e-15 77.4
Msa0837630 MtrunA17_Chr7g0262801 33.133 166 96 6 414 568 223 384 6.45e-15 77.8
Msa0837630 MtrunA17_Chr1g0200081 32.075 159 100 5 414 565 211 368 7.67e-15 77.4
Msa0837630 MtrunA17_Chr8g0362771 29.208 202 114 6 416 612 274 451 1.07e-14 77.8
Msa0837630 MtrunA17_Chr1g0182711 32.530 166 97 6 414 568 224 385 1.56e-14 76.3
Msa0837630 MtrunA17_Chr3g0108321 34.459 148 83 6 414 551 195 338 1.60e-14 75.9
Msa0837630 MtrunA17_Chr4g0050561 30.698 215 119 9 416 601 194 407 1.63e-14 76.3
Msa0837630 MtrunA17_Chr6g0462581 29.902 204 111 6 414 611 536 713 2.60e-14 76.6
Msa0837630 MtrunA17_Chr1g0202381 27.536 207 118 5 414 614 505 685 8.24e-14 75.1
Msa0837630 MtrunA17_Chr6g0459561 26.699 206 123 4 412 612 415 597 9.46e-14 74.7
Msa0837630 MtrunA17_Chr3g0135721 30.698 215 113 9 416 621 261 448 1.01e-13 74.7
Msa0837630 MtrunA17_Chr3g0135761 30.698 215 113 10 416 621 259 446 1.12e-13 74.3
Msa0837630 MtrunA17_Chr7g0246111 31.915 141 93 2 414 551 247 387 2.17e-13 73.2
Msa0837630 MtrunA17_Chr8g0357301 28.000 225 117 9 416 623 507 703 5.94e-13 72.4
Msa0837630 MtrunA17_Chr2g0277831 29.808 208 110 8 414 611 278 459 3.50e-12 69.7
Msa0837630 MtrunA17_Chr7g0255721 25.806 217 117 7 408 611 715 900 7.43e-12 68.9
Msa0837630 MtrunA17_Chr7g0255721 27.074 229 126 7 394 611 400 598 4.83e-11 66.2
Msa0837630 MtrunA17_Chr7g0255691 29.268 205 115 8 416 601 55 248 9.64e-12 68.2
Msa0837630 MtrunA17_Chr4g0052271 31.034 145 92 4 413 551 153 295 1.06e-11 67.4
Msa0837630 MtrunA17_Chr2g0316851 30.275 218 112 10 414 619 630 819 1.20e-11 68.6
Msa0837630 MtrunA17_Chr3g0086401 29.577 142 95 4 418 555 425 565 1.50e-11 67.8
Msa0837630 MtrunA17_Chr5g0432631 29.108 213 113 9 416 618 266 450 1.61e-11 67.8
Msa0837630 MtrunA17_Chr1g0202371 26.923 208 117 6 414 614 434 613 2.21e-11 67.0
Msa0837630 MtrunA17_Chr8g0388371 28.235 255 141 9 394 631 419 648 3.94e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0837630 AT2G18330.1 67.319 664 175 7 1 654 1 632 0.0 840
Msa0837630 AT4G36580.1 65.356 661 191 6 1 656 1 628 0.0 783
Msa0837630 AT5G16930.1 57.585 646 222 7 25 650 22 635 0.0 727
Msa0837630 AT3G03060.1 61.028 603 190 8 57 650 57 623 0.0 716
Msa0837630 AT1G50140.3 31.797 217 111 8 414 623 748 934 2.89e-19 93.2
Msa0837630 AT1G50140.1 31.797 217 111 8 414 623 748 934 2.89e-19 93.2
Msa0837630 AT1G50140.4 31.797 217 111 8 414 623 748 934 2.89e-19 93.2
Msa0837630 AT1G50140.2 31.797 217 111 8 414 623 726 912 3.48e-19 92.8
Msa0837630 AT1G50140.5 31.797 217 111 8 414 623 726 912 3.48e-19 92.8
Msa0837630 AT3G19740.1 31.944 216 112 8 414 623 738 924 1.54e-18 90.9
Msa0837630 AT2G27600.1 25.600 250 159 4 370 615 120 346 8.43e-18 87.0
Msa0837630 AT4G04180.2 32.843 204 91 6 416 608 357 525 1.92e-17 86.7
Msa0837630 AT4G04180.1 32.843 204 91 6 416 608 362 530 2.12e-17 86.7
Msa0837630 AT5G03340.1 31.905 210 112 9 409 611 508 693 4.55e-17 85.9
Msa0837630 AT5G03340.1 29.557 203 113 7 414 611 240 417 9.50e-15 78.6
Msa0837630 AT1G80350.1 28.708 209 114 5 414 611 271 455 1.00e-16 84.3
Msa0837630 AT3G53230.1 31.280 211 112 9 409 611 509 694 1.06e-16 84.7
Msa0837630 AT3G53230.1 30.049 203 112 7 414 611 241 418 9.93e-16 81.6
Msa0837630 AT1G64110.5 29.665 209 112 5 414 614 552 733 3.29e-16 83.2
Msa0837630 AT1G64110.3 29.665 209 112 5 414 614 552 733 3.29e-16 83.2
Msa0837630 AT1G64110.2 29.665 209 112 5 414 614 554 735 3.32e-16 83.2
Msa0837630 AT1G64110.4 29.665 209 112 5 414 614 554 735 3.32e-16 83.2
Msa0837630 AT1G64110.1 29.665 209 112 5 414 614 549 730 3.67e-16 83.2
Msa0837630 AT1G02890.1 29.187 209 113 7 414 614 978 1159 3.74e-16 83.2
Msa0837630 AT1G53780.2 33.750 160 96 6 414 565 394 551 5.24e-16 82.0
Msa0837630 AT5G53540.1 35.065 154 89 4 413 559 120 269 5.74e-16 80.9
Msa0837630 AT1G45000.1 34.211 152 92 5 414 558 172 322 5.94e-16 80.9
Msa0837630 AT1G53780.3 33.750 160 96 6 414 565 372 529 6.52e-16 82.0
Msa0837630 AT1G53780.1 33.750 160 96 6 414 565 373 530 6.89e-16 81.6
Msa0837630 AT1G53780.4 33.750 160 96 6 414 565 373 530 6.89e-16 81.6
Msa0837630 AT1G09100.1 30.400 250 121 9 394 599 175 415 7.24e-16 80.9
Msa0837630 AT3G09840.1 30.189 212 114 9 409 611 508 694 7.96e-16 82.0
Msa0837630 AT3G09840.1 29.557 203 113 7 414 611 240 417 1.07e-14 78.2
Msa0837630 AT3G05530.1 29.719 249 124 9 394 599 176 416 1.36e-15 80.1
Msa0837630 AT2G26140.1 31.674 221 115 9 416 627 261 454 1.67e-15 80.9
Msa0837630 AT3G27120.1 24.621 264 159 6 357 612 384 615 2.50e-15 80.1
Msa0837630 AT4G02480.1 28.708 209 114 7 414 614 997 1178 3.11e-15 80.5
Msa0837630 AT5G43010.1 33.553 152 93 5 414 558 172 322 3.76e-15 78.6
Msa0837630 AT4G27680.1 36.774 155 85 7 413 559 117 266 3.84e-15 78.6
Msa0837630 AT4G28000.2 33.974 156 91 4 414 561 553 704 4.11e-15 79.7
Msa0837630 AT4G28000.1 33.974 156 91 4 414 561 551 702 4.25e-15 79.7
Msa0837630 AT4G28000.3 33.974 156 91 4 414 561 553 704 4.30e-15 79.7
Msa0837630 AT4G29040.1 33.129 163 95 5 414 566 221 379 9.14e-15 77.4
Msa0837630 AT1G53750.1 32.075 159 100 5 414 565 201 358 1.22e-14 77.0
Msa0837630 AT5G58290.1 33.133 166 96 7 414 568 188 349 1.45e-14 76.6
Msa0837630 AT5G52882.1 33.333 156 92 4 414 561 550 701 1.52e-14 77.8
Msa0837630 AT2G20140.1 34.177 158 90 5 414 561 221 374 1.93e-14 76.6
Msa0837630 AT5G19990.1 30.698 215 119 9 416 601 196 409 1.97e-14 76.3
Msa0837630 AT5G19990.3 30.698 215 119 9 416 601 196 409 1.97e-14 76.3
Msa0837630 AT5G20000.1 30.698 215 119 9 416 601 196 409 2.35e-14 76.3
Msa0837630 AT4G24860.1 28.502 207 117 6 414 614 854 1035 2.51e-14 77.4
Msa0837630 AT4G24860.3 28.502 207 117 6 414 614 852 1033 2.66e-14 77.4
Msa0837630 AT4G24860.4 28.502 207 117 6 414 614 827 1008 3.03e-14 77.0
Msa0837630 AT4G24860.2 28.502 207 117 6 414 614 850 1031 3.24e-14 77.0
Msa0837630 AT5G19990.2 30.556 216 118 10 416 601 138 351 3.27e-14 75.1
Msa0837630 AT2G34560.1 30.198 202 111 7 413 608 134 311 8.41e-14 73.9
Msa0837630 AT2G34560.2 30.198 202 111 7 413 608 143 320 9.40e-14 73.9
Msa0837630 AT2G45500.4 27.723 202 119 6 414 611 115 293 9.84e-14 73.6
Msa0837630 AT2G45500.3 27.723 202 119 6 414 611 115 293 9.84e-14 73.6
Msa0837630 AT1G79560.1 25.714 280 163 12 359 622 472 722 1.02e-13 75.5
Msa0837630 AT1G79560.2 25.714 280 163 12 359 622 472 722 1.23e-13 75.1
Msa0837630 AT2G45500.2 28.358 201 119 6 414 611 248 426 1.24e-13 74.3
Msa0837630 AT1G79560.3 25.714 280 163 12 359 622 472 722 1.30e-13 75.1
Msa0837630 AT2G45500.1 27.723 202 119 6 414 611 252 430 1.37e-13 73.9
Msa0837630 AT5G53170.1 31.628 215 110 9 416 621 396 582 1.39e-13 74.7
Msa0837630 AT2G45500.5 28.358 201 119 6 414 611 258 436 1.85e-13 73.6
Msa0837630 AT5G64580.1 27.059 255 145 10 373 612 307 535 5.08e-13 73.2
Msa0837630 AT3G02450.1 28.936 235 155 9 398 624 349 579 1.02e-12 71.6
Msa0837630 AT3G56690.1 31.788 151 96 5 414 559 417 565 1.62e-12 71.6
Msa0837630 AT2G03670.1 32.558 172 85 8 416 567 57 217 6.79e-12 68.9
Msa0837630 AT1G05910.1 33.962 159 93 8 414 562 414 570 1.99e-11 68.2
Msa0837630 AT1G02890.2 26.087 207 94 5 414 614 978 1131 2.88e-11 67.4
Msa0837630 AT3G15120.2 31.193 218 110 11 414 619 762 951 5.51e-11 66.6
Msa0837630 AT3G15120.1 31.193 218 110 11 414 619 752 941 5.75e-11 66.6
Msa0837630 AT4G23940.1 30.688 189 115 6 394 567 442 629 9.12e-11 65.9
Msa0837630 AT5G42270.1 28.505 214 116 10 416 618 284 471 9.51e-11 65.5

Find 197 sgRNAs with CRISPR-Local

Find 485 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAAATATCTCGTGAATTT+TGG 0.133415 5_4:-11670123 None:intergenic
CCATCCATGTAGATTCTTAT+TGG 0.154162 5_4:-11671371 None:intergenic
GTGGTATTGGCTTGGGGCCT+GGG 0.192712 5_4:+11666356 Msa0837630:CDS
GGAAGGTGAAGAAGAGAAAA+AGG 0.214032 5_4:-11664651 None:intergenic
GGTGGTATTGGCTTGGGGCC+TGG 0.215284 5_4:+11666355 Msa0837630:CDS
GGAAGTAGGCTTTAATTAAA+TGG 0.217490 5_4:+11671181 Msa0837630:three_prime_UTR
ATCATCAATGGCAAAGTTTC+CGG 0.218092 5_4:+11669176 Msa0837630:CDS
CATTGGAGGCTTTAATTAAA+TGG 0.219914 5_4:+11671160 Msa0837630:three_prime_UTR
TTCTGAAAAGCAATGCATTT+AGG 0.223417 5_4:-11670579 None:intergenic
GCAGCTCTTTCTAACGATTC+AGG 0.254697 5_4:-11664761 None:intergenic
GGATCAAAACCGGACTTATT+AGG 0.258219 5_4:-11664740 None:intergenic
AGCGTCCAAGCTGCTGTCTA+TGG 0.258397 5_4:+11670913 Msa0837630:CDS
TGGCCTGGTGGTATTGGCTT+GGG 0.259130 5_4:+11666349 Msa0837630:CDS
TCTGAAAAGCAATGCATTTA+GGG 0.268029 5_4:-11670578 None:intergenic
TAATTCTCCTCACGCTAAAA+AGG 0.268676 5_4:+11664805 Msa0837630:CDS
TTGGGTTGGCCTGGTGGTAT+TGG 0.277724 5_4:+11666343 Msa0837630:CDS
TGGAGGAGATGTTGCACCTC+TGG 0.290956 5_4:+11670085 Msa0837630:CDS
GGGATATATTAATCGGATTC+TGG 0.292072 5_4:+11669131 Msa0837630:CDS
GCAGGATAGGTTGCGTAAAA+TGG 0.292259 5_4:+11665780 Msa0837630:intron
CCTCTGTCAATTGCGTAAAA+AGG 0.294955 5_4:-11666870 None:intergenic
CGCTGCAGCGGCGGTGGCTG+CGG 0.296793 5_4:-11664573 None:intergenic
TACTAAATGCAGGCGGTCTA+AGG 0.335414 5_4:+11668256 Msa0837630:intron
TTGGCCTGGTGGTATTGGCT+TGG 0.347922 5_4:+11666348 Msa0837630:CDS
GCGAGGTTAAACCCTCGGTT+AGG 0.357736 5_4:-11664483 None:intergenic
GTCCGTTGGCGGAGGTGAAT+TGG 0.360727 5_4:-11664672 None:intergenic
CCGATTTGTTATCAGATGAT+TGG 0.361998 5_4:-11664694 None:intergenic
GTTACGATTTGAAGATGAAT+TGG 0.367317 5_4:+11665855 Msa0837630:CDS
TGAAGCCGCTGCAGCGGCGG+TGG 0.370525 5_4:-11664579 None:intergenic
TTTAGCGGCGGACATTGTTT+TGG 0.372118 5_4:-11664534 None:intergenic
GTGATTGAATTCCCACTTCC+AGG 0.372589 5_4:+11670691 Msa0837630:CDS
TTGGACGCTGGCCATGAGTT+TGG 0.375839 5_4:-11670899 None:intergenic
AAGTCTGTTGGGATTCAAAA+TGG 0.381927 5_4:+11669264 Msa0837630:CDS
ACTTTGCCATTGATGATTCC+CGG 0.391919 5_4:-11669170 None:intergenic
TAACATGGGGATATATTAAT+CGG 0.401076 5_4:+11669124 Msa0837630:CDS
GTTGGGATTCAAAATGGTCT+TGG 0.405095 5_4:+11669270 Msa0837630:CDS
TCAACCCACTTGGGTTGGCC+TGG 0.408638 5_4:+11666334 Msa0837630:CDS
CTTAGCTTGAATCTGTTCTT+CGG 0.409283 5_4:-11666764 None:intergenic
GAGGAGAATTATTGATTTCA+CGG 0.411382 5_4:-11664793 None:intergenic
TCATCAATGGCAAAGTTTCC+GGG 0.415540 5_4:+11669177 Msa0837630:CDS
AGATTCGGAGTAAGCGGGAT+TGG 0.419229 5_4:-11664615 None:intergenic
ACATCATCAGCGGTTAAAAC+TGG 0.420416 5_4:+11670999 Msa0837630:CDS
AATTCACGAGATATTTGATT+GGG 0.424190 5_4:+11670127 Msa0837630:CDS
AAAAGAAACTGCTAGAACTA+AGG 0.427392 5_4:+11666822 Msa0837630:CDS
TTTCTCTTTAAGCTCTCTCC+TGG 0.433188 5_4:-11666899 None:intergenic
AAAAGTTGTTACATTTGATC+AGG 0.434557 5_4:-11671043 None:intergenic
CGGGGACAATTCAACCCACT+TGG 0.435013 5_4:+11666324 Msa0837630:CDS
AAATTCACGAGATATTTGAT+TGG 0.443300 5_4:+11670126 Msa0837630:CDS
GCTTTATTAATTACTAGCAT+TGG 0.445402 5_4:+11671143 Msa0837630:three_prime_UTR
CAAAAGACTTCTCTTGCATC+TGG 0.451953 5_4:-11666714 None:intergenic
GGCCTGGTGGTATTGGCTTG+GGG 0.453454 5_4:+11666350 Msa0837630:CDS
ATATATTTGATTTAATAGAC+AGG 0.454169 5_4:-11671286 None:intergenic
TCCTTTAGTAGTCTAACTAC+GGG 0.454293 5_4:+11666305 Msa0837630:intron
TGGGGCAGCCATCATTGATC+CGG 0.455226 5_4:+11669151 Msa0837630:CDS
AGCTATTTCCCTTGCAACCA+TGG 0.456836 5_4:-11669421 None:intergenic
GGATATATTAATCGGATTCT+GGG 0.464287 5_4:+11669132 Msa0837630:CDS
GCGTCCAAGCTGCTGTCTAT+GGG 0.464416 5_4:+11670914 Msa0837630:CDS
TGTTGCACCTCTGGGCCCAC+AGG 0.465792 5_4:+11670094 Msa0837630:CDS
TTCCTTTAGTAGTCTAACTA+CGG 0.467161 5_4:+11666304 Msa0837630:intron
CCAATCATCTGATAACAAAT+CGG 0.468948 5_4:+11664694 Msa0837630:CDS
CGCAGCCACCGCCGCTGCAG+CGG 0.470384 5_4:+11664574 Msa0837630:CDS
TTATCAGATGATTGGTCCGT+TGG 0.472919 5_4:-11664686 None:intergenic
CGTTCCTCCTCTCCTGGAAG+TGG 0.473922 5_4:-11670703 None:intergenic
GTTGTTACATTTGATCAGGC+AGG 0.474235 5_4:-11671039 None:intergenic
ATCAAACACGAAGGCCCATC+AGG 0.475312 5_4:+11669350 Msa0837630:CDS
TTAGGTTCTTCCGCCGGCGG+CGG 0.476994 5_4:-11664722 None:intergenic
TTAAGACGTTCCTCCTCTCC+TGG 0.477110 5_4:-11670709 None:intergenic
TGGGCGTCCTGACTGCGCCT+TGG 0.477986 5_4:+11670933 Msa0837630:CDS
GGAGGAGATGTTGCACCTCT+GGG 0.478550 5_4:+11670086 Msa0837630:CDS
CCATATAGCACGAAAAGAAC+AGG 0.479211 5_4:-11671223 None:intergenic
TAACGATTCAGGATCAAAAC+CGG 0.479681 5_4:-11664750 None:intergenic
GCAGAACCAGAGGCAGGCTC+AGG 0.485076 5_4:+11665831 Msa0837630:CDS
TAGAGAAATTGTTGATTACA+AGG 0.489498 5_4:+11670969 Msa0837630:CDS
TTATTAATTACTAGCATTGG+AGG 0.490000 5_4:+11671146 Msa0837630:three_prime_UTR
TCAGATGATTGGTCCGTTGG+CGG 0.494933 5_4:-11664683 None:intergenic
CGAGGTTAAACCCTCGGTTA+GGG 0.496298 5_4:-11664482 None:intergenic
TGGCAAAGTTTCCGGGATCA+AGG 0.500494 5_4:+11669184 Msa0837630:CDS
CCAATAAGAATCTACATGGA+TGG 0.501536 5_4:+11671371 Msa0837630:three_prime_UTR
TAAATTATAGTACCTTGGCC+AGG 0.502510 5_4:+11669235 Msa0837630:CDS
ATAGACAGCAGCTTGGACGC+TGG 0.503895 5_4:-11670911 None:intergenic
ACGAAAGGAGCAGGCAAGAA+AGG 0.504520 5_4:+11666738 Msa0837630:CDS
AAGGGAAATAGCTAGAAAAT+CGG 0.506778 5_4:+11669431 Msa0837630:CDS
ATCAGAAGACGTGCTGAAAG+AGG 0.511170 5_4:+11670837 Msa0837630:CDS
GGCTTTAATTAAATGGAAGT+AGG 0.511469 5_4:+11671167 Msa0837630:three_prime_UTR
AAGAAAGATTCGGAGTAAGC+GGG 0.513304 5_4:-11664620 None:intergenic
GTAACACCTGAGCCTGCCTC+TGG 0.515556 5_4:-11665837 None:intergenic
AATTGTTGATTACAAGGTGG+TGG 0.517550 5_4:+11670975 Msa0837630:CDS
ATTTCTACGCTCTCAAGACC+TGG 0.518217 5_4:-11671255 None:intergenic
TTGGATTATGCAATGATGAC+TGG 0.518345 5_4:+11670065 Msa0837630:CDS
GGAGATTGAAGCCGCTGCAG+CGG 0.525281 5_4:-11664585 None:intergenic
CAATAAGAATCTACATGGAT+GGG 0.525288 5_4:+11671372 Msa0837630:three_prime_UTR
GGAGCTACTGCATTAGCTGC+AGG 0.526485 5_4:+11668321 Msa0837630:CDS
GGCCCCAAGCCAATACCACC+AGG 0.528348 5_4:-11666352 None:intergenic
ACGAAAAGAACAGGTTCTGC+TGG 0.529735 5_4:-11671214 None:intergenic
TAAGGATATTATTGACCGAT+AGG 0.530872 5_4:+11668274 Msa0837630:CDS
TTAGAATCCAAGGCGCAGTC+AGG 0.531612 5_4:-11670940 None:intergenic
ACAATTCAACCCACTTGGGT+TGG 0.532169 5_4:+11666329 Msa0837630:CDS
TTCCAATTCACCTCCGCCAA+CGG 0.532959 5_4:+11664670 Msa0837630:CDS
GTTACGAAACGGTGCCTGAT+GGG 0.535510 5_4:-11669364 None:intergenic
CAGCGGCGGTGGCTGCGGCG+AGG 0.535814 5_4:-11664568 None:intergenic
GGTGGCTGCGGCGAGGCATG+AGG 0.536582 5_4:-11664561 None:intergenic
TCTAAACAACTTAGAATCCA+AGG 0.537151 5_4:-11670950 None:intergenic
GATTGAAGCCGCTGCAGCGG+CGG 0.537340 5_4:-11664582 None:intergenic
CTGGTAAAACCATGGTTGCA+AGG 0.539901 5_4:+11669412 Msa0837630:CDS
ACCCACTTGGGTTGGCCTGG+TGG 0.541309 5_4:+11666337 Msa0837630:CDS
GGGGAAACGGAAGAAAGATT+CGG 0.545817 5_4:-11664630 None:intergenic
ATTGATCCGGGAATCATCAA+TGG 0.548688 5_4:+11669164 Msa0837630:CDS
GAGAAGGTGCAAAAGTAACA+TGG 0.549009 5_4:+11669109 Msa0837630:intron
ATTGCACTATCAAGATCTCC+TGG 0.549278 5_4:-11670649 None:intergenic
TATGAACTTATTCAGACTCA+AGG 0.552591 5_4:+11665034 Msa0837630:CDS
TGGTAAAACCATGGTTGCAA+GGG 0.552621 5_4:+11669413 Msa0837630:CDS
CACTATTCTTCTCTGCAATG+AGG 0.552659 5_4:-11669310 None:intergenic
CGGTTAAAACTGGCAGCTGA+AGG 0.552692 5_4:+11671009 Msa0837630:CDS
AAATTGCTTATGACTGTTGG+TGG 0.554190 5_4:+11668300 Msa0837630:CDS
AATTCCAATAAGAATCTACA+TGG 0.554214 5_4:+11671367 Msa0837630:three_prime_UTR
CATAAGCAATTTGTCCCTAT+CGG 0.554433 5_4:-11668289 None:intergenic
GCTATATGGAGCAAGAAGCC+AGG 0.555247 5_4:+11671237 Msa0837630:three_prime_UTR
GACAAATTGCTTATGACTGT+TGG 0.555889 5_4:+11668297 Msa0837630:CDS
CAAATCGGATTCACCGCCGC+CGG 0.558661 5_4:+11664709 Msa0837630:CDS
TGATGAAAGTAATGGCTCCA+AGG 0.561353 5_4:+11670765 Msa0837630:CDS
GCGGAAGAACCTAATAAGTC+CGG 0.562387 5_4:+11664731 Msa0837630:CDS
TGTTACGAAACGGTGCCTGA+TGG 0.563042 5_4:-11669365 None:intergenic
GATGATTGGTCCGTTGGCGG+AGG 0.565434 5_4:-11664680 None:intergenic
GGGGCAGCCATCATTGATCC+GGG 0.565807 5_4:+11669152 Msa0837630:CDS
AGAGCTTAAAGAGAAACTGC+AGG 0.566021 5_4:+11666906 Msa0837630:CDS
AATTGACAGAGGAGCAAACC+AGG 0.568575 5_4:+11666881 Msa0837630:CDS
TCGAGGAGGAGCACACTCCC+AGG 0.569529 5_4:-11666373 None:intergenic
GAGGCATGAGGTTAATTTAG+CGG 0.570051 5_4:-11664549 None:intergenic
TGAATTCCCACTTCCAGGAG+AGG 0.571138 5_4:+11670696 Msa0837630:CDS
AAATTATAGTACCTTGGCCA+GGG 0.573385 5_4:+11669236 Msa0837630:CDS
ATCGGATTCACCGCCGCCGG+CGG 0.574610 5_4:+11664712 Msa0837630:CDS
ACAAGAGCAGAACCAGAGGC+AGG 0.574938 5_4:+11665825 Msa0837630:CDS
AAGAATAGTGCATTTAGCAC+GGG 0.575516 5_4:+11669323 Msa0837630:CDS
AGTAGGCTTTAATTAAATGG+AGG 0.578235 5_4:+11671184 Msa0837630:three_prime_UTR
TGAGACATGATCCTTGATCC+CGG 0.580633 5_4:-11669195 None:intergenic
TTGTTACATTTGATCAGGCA+GGG 0.581064 5_4:-11671038 None:intergenic
GATGATTCCCGGATCAATGA+TGG 0.583159 5_4:-11669159 None:intergenic
GACTTATTAGGTTCTTCCGC+CGG 0.585293 5_4:-11664728 None:intergenic
TTATTAGGTTCTTCCGCCGG+CGG 0.586592 5_4:-11664725 None:intergenic
GATGAAAGTAATGGCTCCAA+GGG 0.587048 5_4:+11670766 Msa0837630:CDS
AGAAGGTGCAAAAGTAACAT+GGG 0.587485 5_4:+11669110 Msa0837630:CDS
GGGGACAATTCAACCCACTT+GGG 0.588447 5_4:+11666325 Msa0837630:CDS
GGAAATGGAGGTTCAGAGCA+TGG 0.588594 5_4:-11664507 None:intergenic
ATGGCGCGAGGTTAAACCCT+CGG 0.588829 5_4:-11664488 None:intergenic
ACTGCAAGACTTACTCGCAA+AGG 0.589810 5_4:-11670202 None:intergenic
GAAGAATAGTGCATTTAGCA+CGG 0.591453 5_4:+11669322 Msa0837630:CDS
AAGGCGACATAATGTTGAGT+TGG 0.592330 5_4:+11666690 Msa0837630:CDS
TATCTATGTGATGAAAGTAA+TGG 0.594084 5_4:+11670757 Msa0837630:CDS
GACGCCCATAGACAGCAGCT+TGG 0.595340 5_4:-11670918 None:intergenic
AAGGATATTATTGACCGATA+GGG 0.595741 5_4:+11668275 Msa0837630:CDS
GCTAAAACTTGCTATCTATG+TGG 0.597443 5_4:-11671122 None:intergenic
TCCGCTAAAACCCTAACCGA+GGG 0.598068 5_4:+11664472 Msa0837630:five_prime_UTR
TGTGACTCAGCAACAGAAAG+CGG 0.598417 5_4:+11666792 Msa0837630:CDS
TATATTTGATTTAATAGACA+GGG 0.605568 5_4:-11671285 None:intergenic
GTAACAGCCTGTGGGCCCAG+AGG 0.607222 5_4:-11670101 None:intergenic
ACTATTCTTCTCTGCAATGA+GGG 0.612707 5_4:-11669309 None:intergenic
ATTGGCAAGGAAAAGAATGC+AGG 0.613656 5_4:+11665873 Msa0837630:CDS
AGACAGATCATGAAGATCAA+AGG 0.614020 5_4:+11666671 Msa0837630:intron
GTTCCTCCTCTCCTGGAAGT+GGG 0.614170 5_4:-11670702 None:intergenic
GATATATTAATCGGATTCTG+GGG 0.614964 5_4:+11669133 Msa0837630:CDS
GAGCTTAAAGAGAAACTGCA+GGG 0.615293 5_4:+11666907 Msa0837630:CDS
CCGTGAGATAGCCAAACTCA+TGG 0.617257 5_4:+11670888 Msa0837630:CDS
GTGGCTCATAAAATGCATCT+CGG 0.618782 5_4:-11671103 None:intergenic
TACCACCAGGCCAACCCAAG+TGG 0.619285 5_4:-11666339 None:intergenic
GAAGAAAGATTCGGAGTAAG+CGG 0.621085 5_4:-11664621 None:intergenic
GAGGCTGCCAAGAAAACAGA+GGG 0.621185 5_4:+11670856 Msa0837630:CDS
ATGAAAGTAATGGCTCCAAG+GGG 0.622020 5_4:+11670767 Msa0837630:CDS
TGGGCCAAGAAATCTAAAAG+AGG 0.624957 5_4:+11670146 Msa0837630:CDS
TTAAAACTGGCAGCTGAAGG+CGG 0.625915 5_4:+11671012 Msa0837630:CDS
TGGGAGTGTGCTCCTCCTCG+AGG 0.627689 5_4:+11666375 Msa0837630:CDS
GATTTGAAGATGAATTGGCA+AGG 0.629069 5_4:+11665860 Msa0837630:CDS
AGAAATTGTTGATTACAAGG+TGG 0.629900 5_4:+11670972 Msa0837630:CDS
ATTCCCACTTCCAGGAGAGG+AGG 0.632531 5_4:+11670699 Msa0837630:CDS
TAATACAAGAGCAGAACCAG+AGG 0.634859 5_4:+11665821 Msa0837630:CDS
TTCCGCTAAAACCCTAACCG+AGG 0.635470 5_4:+11664471 Msa0837630:five_prime_UTR
GAAAGTAATGGCTCCAAGGG+GGG 0.640631 5_4:+11670769 Msa0837630:CDS
ACCACCAGGCCAACCCAAGT+GGG 0.642479 5_4:-11666338 None:intergenic
TCCTGGGACTGGTAAAACCA+TGG 0.642535 5_4:+11669404 Msa0837630:CDS
CCATGAGTTTGGCTATCTCA+CGG 0.651212 5_4:-11670888 None:intergenic
GTGCTTGCGACAAACAGACC+AGG 0.654798 5_4:+11670631 Msa0837630:CDS
GTTGGCGGAGGTGAATTGGA+AGG 0.655956 5_4:-11664668 None:intergenic
GCATGAGGTTAATTTAGCGG+CGG 0.664313 5_4:-11664546 None:intergenic
GTAAGCGGGATTGGATTGCG+AGG 0.674674 5_4:-11664606 None:intergenic
TAGAACTAAGGAAATTGCAG+AGG 0.681183 5_4:+11666834 Msa0837630:CDS
GAAGGTGCAAAAGTAACATG+GGG 0.683865 5_4:+11669111 Msa0837630:CDS
AGCTTAAAGAGAAACTGCAG+GGG 0.691731 5_4:+11666908 Msa0837630:CDS
GATTATGCAATGATGACTGG+AGG 0.692793 5_4:+11670068 Msa0837630:CDS
GAGGTTCAGAGCATGGCGCG+AGG 0.693110 5_4:-11664500 None:intergenic
CCTTTAGTAGTCTAACTACG+GGG 0.696328 5_4:+11666306 Msa0837630:intron
TGAAAGTAATGGCTCCAAGG+GGG 0.703197 5_4:+11670768 Msa0837630:CDS
TCGAACCTGAGACCTCGAGG+AGG 0.712524 5_4:-11666387 None:intergenic
CTGCAGGAGTATATACGACG+AGG 0.718330 5_4:+11668337 Msa0837630:CDS
AGAGGCTGCCAAGAAAACAG+AGG 0.724261 5_4:+11670855 Msa0837630:CDS
AGGTGGTGGAACATCATCAG+CGG 0.727680 5_4:+11670989 Msa0837630:CDS
ACGGGCAACATCAAACACGA+AGG 0.729516 5_4:+11669341 Msa0837630:CDS
GCTTAAAGAGAAACTGCAGG+GGG 0.740481 5_4:+11666909 Msa0837630:CDS
TTACATTTGATCAGGCAGGG+AGG 0.742646 5_4:-11671035 None:intergenic
AGGCTGCCAAGAAAACAGAG+GGG 0.806659 5_4:+11670857 Msa0837630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATGATAACAAAATATA+AGG - chr5_4:11665613-11665632 None:intergenic 10.0%
!! AATTTATGTATATTGAAAAT+AGG - chr5_4:11667124-11667143 None:intergenic 10.0%
!!! ATTATTTTTCAAATTTAAAG+TGG + chr5_4:11667351-11667370 Msa0837630:intron 10.0%
!!! TGTTTTTTAAACATTTTTAT+GGG - chr5_4:11668784-11668803 None:intergenic 10.0%
!!! TTGTTTTTTAAACATTTTTA+TGG - chr5_4:11668785-11668804 None:intergenic 10.0%
!! ATTTAAATATTATTTGCAAA+TGG - chr5_4:11669062-11669081 None:intergenic 10.0%
!!! TTCTAAAATAATATATCTAA+AGG - chr5_4:11669754-11669773 None:intergenic 10.0%
!!! TTTATTAATTTTACTATCAA+TGG - chr5_4:11669832-11669851 None:intergenic 10.0%
!!! TAAAAATTTTACAAAGTTGT+CGG - chr5_4:11665554-11665573 None:intergenic 15.0%
!!! AATTCACTTTTTCAATAAAA+AGG - chr5_4:11665926-11665945 None:intergenic 15.0%
!!! TGTTTCTAAAACAAAATTTA+AGG - chr5_4:11666174-11666193 None:intergenic 15.0%
!! CTTCTTAAAAAAAAAAACTA+CGG + chr5_4:11666445-11666464 Msa0837630:intron 15.0%
!! TTCTTAAAAAAAAAAACTAC+GGG + chr5_4:11666446-11666465 Msa0837630:intron 15.0%
!! GAAAAATAATTGAATTGTTA+AGG - chr5_4:11667341-11667360 None:intergenic 15.0%
!! GAAAAATATATCAATAGTAA+TGG - chr5_4:11667451-11667470 None:intergenic 15.0%
!!! GTTTTTTAAACATTTTTATG+GGG - chr5_4:11668783-11668802 None:intergenic 15.0%
!!! AGATATATTATTTTAGAACT+TGG + chr5_4:11669756-11669775 Msa0837630:intron 15.0%
!!! TATATTTGATTTAATAGACA+GGG - chr5_4:11671288-11671307 None:intergenic 15.0%
!!! ATATATTTGATTTAATAGAC+AGG - chr5_4:11671289-11671308 None:intergenic 15.0%
!!! TATTGTTTTGTGATGTATTT+TGG + chr5_4:11664932-11664951 Msa0837630:intron 20.0%
!! TTGAAACAGAAAAATTAGAA+AGG - chr5_4:11665580-11665599 None:intergenic 20.0%
!!! CATTATAGTTTTAACAATGT+TGG + chr5_4:11666010-11666029 Msa0837630:intron 20.0%
!!! TTCTAAAACAAAATTTAAGG+TGG - chr5_4:11666171-11666190 None:intergenic 20.0%
!! TCTTAAAAAAAAAAACTACG+GGG + chr5_4:11666447-11666466 Msa0837630:intron 20.0%
!! ACACTTAGTTAAATGATTTA+TGG + chr5_4:11666513-11666532 Msa0837630:intron 20.0%
!! TAATATGATCTTCATATATG+AGG - chr5_4:11667029-11667048 None:intergenic 20.0%
!! TAAACCCATTAATTATGATT+CGG + chr5_4:11667166-11667185 Msa0837630:intron 20.0%
!! CTGGTAATATTTACTAAAAT+TGG + chr5_4:11667657-11667676 Msa0837630:intron 20.0%
!!! AGTAGTTTATTGATTGAAAA+GGG - chr5_4:11668860-11668879 None:intergenic 20.0%
!!! AAGTAGTTTATTGATTGAAA+AGG - chr5_4:11668861-11668880 None:intergenic 20.0%
!!! AGTTTTAAATTATAGTACCT+TGG + chr5_4:11669230-11669249 Msa0837630:CDS 20.0%
!! TAATATGCGATATGAATAAA+TGG + chr5_4:11669619-11669638 Msa0837630:intron 20.0%
!! AGAAAAATTGAAATAGTCAA+AGG - chr5_4:11670037-11670056 None:intergenic 20.0%
!!! ACTATTTCAATTTTTCTGTA+AGG + chr5_4:11670040-11670059 Msa0837630:intron 20.0%
!!! CTATTTCAATTTTTCTGTAA+GGG + chr5_4:11670041-11670060 Msa0837630:intron 20.0%
!! GAAAATATTGTAATCCTATT+AGG - chr5_4:11670424-11670443 None:intergenic 20.0%
!!! ATCTTTTATGGTAATTTTCT+GGG - chr5_4:11670815-11670834 None:intergenic 20.0%
!!! AATCTTTTATGGTAATTTTC+TGG - chr5_4:11670816-11670835 None:intergenic 20.0%
!! TAAAAAGAATATGCTTTCAT+GGG - chr5_4:11671075-11671094 None:intergenic 20.0%
!! TTAAAAAGAATATGCTTTCA+TGG - chr5_4:11671076-11671095 None:intergenic 20.0%
! TCAAGCTAAAATTAAAGACT+TGG + chr5_4:11665462-11665481 Msa0837630:intron 25.0%
!! GTATAGTCATGTTTAAAGTT+TGG + chr5_4:11665484-11665503 Msa0837630:intron 25.0%
! AACAAAATATAAGGATAGCT+TGG - chr5_4:11665604-11665623 None:intergenic 25.0%
!!! TCAATTTGTTATTGCACTTA+TGG - chr5_4:11665662-11665681 None:intergenic 25.0%
!! TCATTTCTTTATTGCTCTTT+TGG + chr5_4:11666108-11666127 Msa0837630:intron 25.0%
!! ATTTATCTCCTTTCTTTTCT+TGG + chr5_4:11666242-11666261 Msa0837630:intron 25.0%
! AATGATTAATAGAGACAAAC+CGG - chr5_4:11667058-11667077 None:intergenic 25.0%
! TCATTCTATACTACTAATGA+AGG + chr5_4:11667073-11667092 Msa0837630:intron 25.0%
! CATTCTATACTACTAATGAA+GGG + chr5_4:11667074-11667093 Msa0837630:intron 25.0%
! ATTCTATACTACTAATGAAG+GGG + chr5_4:11667075-11667094 Msa0837630:intron 25.0%
! TAATCCCCATATTTAAATAG+CGG + chr5_4:11667211-11667230 Msa0837630:intron 25.0%
! ATAACCGCTATTTAAATATG+GGG - chr5_4:11667218-11667237 None:intergenic 25.0%
! CATAACCGCTATTTAAATAT+GGG - chr5_4:11667219-11667238 None:intergenic 25.0%
! AAAGTTAGTTCCTTAAACTA+TGG - chr5_4:11667290-11667309 None:intergenic 25.0%
! ATAGTTTAAGGAACTAACTT+TGG + chr5_4:11667289-11667308 Msa0837630:intron 25.0%
! GGATAAATTTGTACAGAAAA+AGG - chr5_4:11667320-11667339 None:intergenic 25.0%
!! ATTTTTCCTATGTGTAAAAG+TGG + chr5_4:11667387-11667406 Msa0837630:intron 25.0%
!!! TAATAACCACTTTTACACAT+AGG - chr5_4:11667396-11667415 None:intergenic 25.0%
! AGTGGTTATTACATAATAAG+AGG + chr5_4:11667405-11667424 Msa0837630:intron 25.0%
! GTGGTTATTACATAATAAGA+GGG + chr5_4:11667406-11667425 Msa0837630:intron 25.0%
! AAGATTTAATCAATACAACC+TGG + chr5_4:11667699-11667718 Msa0837630:intron 25.0%
! AGATTTAATCAATACAACCT+GGG + chr5_4:11667700-11667719 Msa0837630:intron 25.0%
! CCAAAACTCAAAAACAAATA+TGG - chr5_4:11667837-11667856 None:intergenic 25.0%
!!! CCATATTTGTTTTTGAGTTT+TGG + chr5_4:11667834-11667853 Msa0837630:intron 25.0%
! ATATCAGACTACAAATTTGT+TGG + chr5_4:11668026-11668045 Msa0837630:intron 25.0%
!!! AAATGTTGTTTCTATACTAG+AGG + chr5_4:11668052-11668071 Msa0837630:intron 25.0%
! AACATAACAAGTGTAATGTT+TGG - chr5_4:11668465-11668484 None:intergenic 25.0%
! TGAATACTAAGCAAATGTAT+TGG + chr5_4:11668594-11668613 Msa0837630:intron 25.0%
! GAATACTAAGCAAATGTATT+GGG + chr5_4:11668595-11668614 Msa0837630:intron 25.0%
!!! AGTTTATTGATAACGAACTT+GGG - chr5_4:11668992-11669011 None:intergenic 25.0%
!!! TAGTTTATTGATAACGAACT+TGG - chr5_4:11668993-11669012 None:intergenic 25.0%
! TAACATGGGGATATATTAAT+CGG + chr5_4:11669124-11669143 Msa0837630:CDS 25.0%
!! TAAAAAAGCATGTTACGAAA+CGG - chr5_4:11669378-11669397 None:intergenic 25.0%
!!! TTTCGTAACATGCTTTTTTA+TGG + chr5_4:11669378-11669397 Msa0837630:CDS 25.0%
!!! TTCGTAACATGCTTTTTTAT+GGG + chr5_4:11669379-11669398 Msa0837630:CDS 25.0%
!!! TTACATGTGACTTTTTTTGT+TGG + chr5_4:11669515-11669534 Msa0837630:intron 25.0%
! GATAAATCAAATCCATTTGT+AGG - chr5_4:11669697-11669716 None:intergenic 25.0%
!! CTAAAGTGAAAAAGTCATTT+TGG + chr5_4:11669784-11669803 Msa0837630:intron 25.0%
! GTCAATGATAAGAAAATCAA+CGG - chr5_4:11669915-11669934 None:intergenic 25.0%
!! TACTTTATTTGCAGAAATTG+AGG + chr5_4:11669992-11670011 Msa0837630:intron 25.0%
!! ATCAAATATCTCGTGAATTT+TGG - chr5_4:11670126-11670145 None:intergenic 25.0%
! AAATTCACGAGATATTTGAT+TGG + chr5_4:11670126-11670145 Msa0837630:CDS 25.0%
! AATTCACGAGATATTTGATT+GGG + chr5_4:11670127-11670146 Msa0837630:CDS 25.0%
! CTATTAGGTTTCATATAACA+GGG - chr5_4:11670409-11670428 None:intergenic 25.0%
!!! TGATCATTTTGATTCAATTC+AGG + chr5_4:11670518-11670537 Msa0837630:intron 25.0%
! TATCTATGTGATGAAAGTAA+TGG + chr5_4:11670757-11670776 Msa0837630:CDS 25.0%
!! TCTTTTATGGTAATTTTCTG+GGG - chr5_4:11670814-11670833 None:intergenic 25.0%
!! GTCTTCTGATAAATCTTTTA+TGG - chr5_4:11670827-11670846 None:intergenic 25.0%
!! TAGAGAAATTGTTGATTACA+AGG + chr5_4:11670969-11670988 Msa0837630:CDS 25.0%
! AAAAGTTGTTACATTTGATC+AGG - chr5_4:11671046-11671065 None:intergenic 25.0%
!! GCTTTATTAATTACTAGCAT+TGG + chr5_4:11671143-11671162 Msa0837630:three_prime_UTR 25.0%
!! TTATTAATTACTAGCATTGG+AGG + chr5_4:11671146-11671165 Msa0837630:three_prime_UTR 25.0%
! AATTCCAATAAGAATCTACA+TGG + chr5_4:11671367-11671386 Msa0837630:three_prime_UTR 25.0%
!!! CATTGTTTTGGTATTGGAAA+TGG - chr5_4:11664525-11664544 None:intergenic 30.0%
CCAATCATCTGATAACAAAT+CGG + chr5_4:11664694-11664713 Msa0837630:CDS 30.0%
!! GAGGAGAATTATTGATTTCA+CGG - chr5_4:11664796-11664815 None:intergenic 30.0%
!! TAAAAAACCTTTTTAGCGTG+AGG - chr5_4:11664815-11664834 None:intergenic 30.0%
ATAATGCGTGTTTATTGCAT+TGG + chr5_4:11664896-11664915 Msa0837630:intron 30.0%
!!! GTATTTTGGTGTTGTATTTC+AGG + chr5_4:11664946-11664965 Msa0837630:intron 30.0%
TATGAACTTATTCAGACTCA+AGG + chr5_4:11665034-11665053 Msa0837630:CDS 30.0%
!!! TTTCAAGTTGTTTTCTAAGC+TGG + chr5_4:11665089-11665108 Msa0837630:intron 30.0%
! ATCTACTCACATAAGTTTTG+TGG + chr5_4:11665176-11665195 Msa0837630:intron 30.0%
!! TAAGTTTTGTGGAGAACTTA+TGG + chr5_4:11665187-11665206 Msa0837630:intron 30.0%
!! TGTTTCTGTATTTGCTATCT+TGG - chr5_4:11665269-11665288 None:intergenic 30.0%
! TAAGTTTTGCTTATCCAAAC+AGG + chr5_4:11665340-11665359 Msa0837630:intron 30.0%
! AAGTTTTGCTTATCCAAACA+GGG + chr5_4:11665341-11665360 Msa0837630:intron 30.0%
AAAGTTTGGTCAGAATTCAA+CGG + chr5_4:11665498-11665517 Msa0837630:intron 30.0%
TGACAATGATCAGATGATAT+TGG + chr5_4:11665679-11665698 Msa0837630:intron 30.0%
ATCCTGCAATGAAATAGATT+TGG - chr5_4:11665767-11665786 None:intergenic 30.0%
AATCTATTTCATTGCAGGAT+AGG + chr5_4:11665767-11665786 Msa0837630:intron 30.0%
GTTACGATTTGAAGATGAAT+TGG + chr5_4:11665855-11665874 Msa0837630:CDS 30.0%
TATGAACTTAGATAATCCCA+TGG + chr5_4:11666201-11666220 Msa0837630:intron 30.0%
TTTGAAAGCCAAGAAAAGAA+AGG - chr5_4:11666253-11666272 None:intergenic 30.0%
TTCCTTTAGTAGTCTAACTA+CGG + chr5_4:11666304-11666323 Msa0837630:intron 30.0%
CTAAACTAACCCACTTAAAT+TGG - chr5_4:11666425-11666444 None:intergenic 30.0%
TTCATAGAGTAATCTAACTG+TGG + chr5_4:11666543-11666562 Msa0837630:intron 30.0%
TCATAGAGTAATCTAACTGT+GGG + chr5_4:11666544-11666563 Msa0837630:intron 30.0%
!! AGAGAAGCTTAATTTGCATA+AGG - chr5_4:11666591-11666610 None:intergenic 30.0%
CAAATGGAAAATTGTGGATA+AGG - chr5_4:11666650-11666669 None:intergenic 30.0%
AAAAGAAACTGCTAGAACTA+AGG + chr5_4:11666822-11666841 Msa0837630:CDS 30.0%
!!! GCTACTTTTAGTCATATTGA+AGG + chr5_4:11666961-11666980 Msa0837630:CDS 30.0%
!! CAAAGGATGTTTTTATCAGT+TGG - chr5_4:11666991-11667010 None:intergenic 30.0%
CAACTGATAAAAACATCCTT+TGG + chr5_4:11666989-11667008 Msa0837630:intron 30.0%
GAAGATCATATTATGTGTAC+CGG + chr5_4:11667036-11667055 Msa0837630:intron 30.0%
TTCTATACTACTAATGAAGG+GGG + chr5_4:11667076-11667095 Msa0837630:intron 30.0%
GCAACCGAATCATAATTAAT+GGG - chr5_4:11667173-11667192 None:intergenic 30.0%
AGCAACCGAATCATAATTAA+TGG - chr5_4:11667174-11667193 None:intergenic 30.0%
CCATAACCGCTATTTAAATA+TGG - chr5_4:11667220-11667239 None:intergenic 30.0%
CCATATTTAAATAGCGGTTA+TGG + chr5_4:11667217-11667236 Msa0837630:intron 30.0%
ATATCACGTACCATAGTTTA+AGG + chr5_4:11667277-11667296 Msa0837630:intron 30.0%
TTTAAGGAACTAACTTTGGT+CGG + chr5_4:11667293-11667312 Msa0837630:intron 30.0%
AGGGAATGCTATTAACTTAT+TGG + chr5_4:11667425-11667444 Msa0837630:intron 30.0%
TTGTGTATGTGGATATTACT+TGG - chr5_4:11667473-11667492 None:intergenic 30.0%
TGCATATCTTCTGTTTGTAT+AGG + chr5_4:11667624-11667643 Msa0837630:intron 30.0%
GCATATCTTCTGTTTGTATA+GGG + chr5_4:11667625-11667644 Msa0837630:intron 30.0%
TTCATGATTGTTTGACTAGT+AGG + chr5_4:11667768-11667787 Msa0837630:intron 30.0%
AAACAAATATGGTTCGTAAG+TGG - chr5_4:11667826-11667845 None:intergenic 30.0%
TTGCAAGGTTAAAATGTTGT+TGG + chr5_4:11667895-11667914 Msa0837630:intron 30.0%
! AAAATAGTTGATACACAACG+AGG - chr5_4:11667962-11667981 None:intergenic 30.0%
CACATATCGCATAAAAACAA+CGG - chr5_4:11668131-11668150 None:intergenic 30.0%
TTTAGTACAGTGTTGTCAAA+TGG + chr5_4:11668152-11668171 Msa0837630:intron 30.0%
TAAGGATATTATTGACCGAT+AGG + chr5_4:11668274-11668293 Msa0837630:CDS 30.0%
AAGGATATTATTGACCGATA+GGG + chr5_4:11668275-11668294 Msa0837630:CDS 30.0%
TCAAAATGAAATGCACTAAG+AGG - chr5_4:11668379-11668398 None:intergenic 30.0%
! AGTGCATTTCATTTTGAACT+TGG + chr5_4:11668382-11668401 Msa0837630:intron 30.0%
CTACTACAAAAGACATTCAA+TGG - chr5_4:11668515-11668534 None:intergenic 30.0%
! TGAATGTCTTTTGTAGTAGT+TGG + chr5_4:11668516-11668535 Msa0837630:intron 30.0%
! GATACAACTATTTTGCAATC+AGG - chr5_4:11668542-11668561 None:intergenic 30.0%
AGTAACATTCACAATGTCTA+TGG + chr5_4:11668625-11668644 Msa0837630:intron 30.0%
CTTACTTAAACTCCTTGATT+CGG - chr5_4:11668663-11668682 None:intergenic 30.0%
! TAAACATTTTTATGGGGTCT+AGG - chr5_4:11668777-11668796 None:intergenic 30.0%
! AGTTTATTGATTGAAAAGGG+AGG - chr5_4:11668857-11668876 None:intergenic 30.0%
GGATATATTAATCGGATTCT+GGG + chr5_4:11669132-11669151 Msa0837630:CDS 30.0%
GATATATTAATCGGATTCTG+GGG + chr5_4:11669133-11669152 Msa0837630:CDS 30.0%
AAGGGAAATAGCTAGAAAAT+CGG + chr5_4:11669431-11669450 Msa0837630:CDS 30.0%
TATTCATATCGCATATTACC+AGG - chr5_4:11669617-11669636 None:intergenic 30.0%
ATATATCTAAAGGAAGTCCA+TGG - chr5_4:11669744-11669763 None:intergenic 30.0%
!! AAGTGAAAAAGTCATTTTGG+AGG + chr5_4:11669787-11669806 Msa0837630:intron 30.0%
ATTTAGTGCCTCACTTTAAA+GGG - chr5_4:11669950-11669969 None:intergenic 30.0%
! TCAATTTTTCTGTAAGGGTT+TGG + chr5_4:11670046-11670065 Msa0837630:intron 30.0%
! AGCGCTGCTTTAATATTATT+TGG + chr5_4:11670273-11670292 Msa0837630:intron 30.0%
TTCTCACATTTAGATCAACT+TGG - chr5_4:11670300-11670319 None:intergenic 30.0%
TAAAATTGTAGACGTCTACA+TGG + chr5_4:11670329-11670348 Msa0837630:intron 30.0%
CCTATTAGGTTTCATATAAC+AGG - chr5_4:11670410-11670429 None:intergenic 30.0%
CCTGTTATATGAAACCTAAT+AGG + chr5_4:11670407-11670426 Msa0837630:intron 30.0%
TCTGAAAAGCAATGCATTTA+GGG - chr5_4:11670581-11670600 None:intergenic 30.0%
! TTCTGAAAAGCAATGCATTT+AGG - chr5_4:11670582-11670601 None:intergenic 30.0%
TCTAAACAACTTAGAATCCA+AGG - chr5_4:11670953-11670972 None:intergenic 30.0%
! AGAAATTGTTGATTACAAGG+TGG + chr5_4:11670972-11670991 Msa0837630:CDS 30.0%
! CAAATGTAACAACTTTTACG+TGG + chr5_4:11671049-11671068 Msa0837630:three_prime_UTR 30.0%
! CATTGGAGGCTTTAATTAAA+TGG + chr5_4:11671160-11671179 Msa0837630:three_prime_UTR 30.0%
! GGCTTTAATTAAATGGAAGT+AGG + chr5_4:11671167-11671186 Msa0837630:three_prime_UTR 30.0%
! GGAAGTAGGCTTTAATTAAA+TGG + chr5_4:11671181-11671200 Msa0837630:three_prime_UTR 30.0%
! AGTAGGCTTTAATTAAATGG+AGG + chr5_4:11671184-11671203 Msa0837630:three_prime_UTR 30.0%
CAATAAGAATCTACATGGAT+GGG + chr5_4:11671372-11671391 Msa0837630:three_prime_UTR 30.0%
!!! TGTTTTGGTATTGGAAATGG+AGG - chr5_4:11664522-11664541 None:intergenic 35.0%
AAGAAGAGAAAAAGGGGAAA+CGG - chr5_4:11664646-11664665 None:intergenic 35.0%
AAGGTGAAGAAGAGAAAAAG+GGG - chr5_4:11664652-11664671 None:intergenic 35.0%
GAAGGTGAAGAAGAGAAAAA+GGG - chr5_4:11664653-11664672 None:intergenic 35.0%
!! CCGATTTGTTATCAGATGAT+TGG - chr5_4:11664697-11664716 None:intergenic 35.0%
TAACGATTCAGGATCAAAAC+CGG - chr5_4:11664753-11664772 None:intergenic 35.0%
TAATTCTCCTCACGCTAAAA+AGG + chr5_4:11664805-11664824 Msa0837630:CDS 35.0%
CGTGTTTATTGCATTGGAAA+TGG + chr5_4:11664902-11664921 Msa0837630:intron 35.0%
TTCAACGGAAAACTAGCAAA+TGG + chr5_4:11665513-11665532 Msa0837630:intron 35.0%
TCAACGGAAAACTAGCAAAT+GGG + chr5_4:11665514-11665533 Msa0837630:intron 35.0%
TGCCAAATCTATTTCATTGC+AGG + chr5_4:11665762-11665781 Msa0837630:intron 35.0%
GATTTGAAGATGAATTGGCA+AGG + chr5_4:11665860-11665879 Msa0837630:CDS 35.0%
TTAGAGACATTGTTCTTCCA+TGG + chr5_4:11665979-11665998 Msa0837630:intron 35.0%
ACTATAATGACTTCTTGCCA+TGG - chr5_4:11665999-11666018 None:intergenic 35.0%
CTGAGCTTGATCTTATCATA+TGG + chr5_4:11666069-11666088 Msa0837630:intron 35.0%
TCCTTTAGTAGTCTAACTAC+GGG + chr5_4:11666305-11666324 Msa0837630:intron 35.0%
GAAGAAAGTGGATAGATTTC+AGG - chr5_4:11666479-11666498 None:intergenic 35.0%
AATCTATCCACTTTCTTCTC+TGG + chr5_4:11666481-11666500 Msa0837630:intron 35.0%
ATCTATCCACTTTCTTCTCT+GGG + chr5_4:11666482-11666501 Msa0837630:intron 35.0%
TGTCTGCAAATGGAAAATTG+TGG - chr5_4:11666656-11666675 None:intergenic 35.0%
AGACAGATCATGAAGATCAA+AGG + chr5_4:11666671-11666690 Msa0837630:intron 35.0%
! AGAGAAGTCTTTTGTACGAA+AGG + chr5_4:11666723-11666742 Msa0837630:CDS 35.0%
! CTTAGCTTGAATCTGTTCTT+CGG - chr5_4:11666767-11666786 None:intergenic 35.0%
TAGAACTAAGGAAATTGCAG+AGG + chr5_4:11666834-11666853 Msa0837630:CDS 35.0%
GGCAAAAATAGTTTCTCCAA+AGG - chr5_4:11667008-11667027 None:intergenic 35.0%
AATAGCGGTTATGGAATGAA+TGG + chr5_4:11667226-11667245 Msa0837630:intron 35.0%
ACAGTCTATTCTTGTGTATG+TGG - chr5_4:11667484-11667503 None:intergenic 35.0%
GTTGATATAATTTCCAGCGA+TGG - chr5_4:11667595-11667614 None:intergenic 35.0%
AAAAGCAAGCTTATAAACCC+AGG - chr5_4:11667720-11667739 None:intergenic 35.0%
! TTTTCACTGAGAGTAGATGA+CGG + chr5_4:11667978-11667997 Msa0837630:intron 35.0%
! CAGTTTGTTCAAATTCTGCT+AGG - chr5_4:11668206-11668225 None:intergenic 35.0%
CATAAGCAATTTGTCCCTAT+CGG - chr5_4:11668292-11668311 None:intergenic 35.0%
GACAAATTGCTTATGACTGT+TGG + chr5_4:11668297-11668316 Msa0837630:CDS 35.0%
AAATTGCTTATGACTGTTGG+TGG + chr5_4:11668300-11668319 Msa0837630:CDS 35.0%
! GTATCTAGAATGCGTAATAG+CGG + chr5_4:11668557-11668576 Msa0837630:intron 35.0%
! AATGCGTAATAGCGGTTTTA+TGG + chr5_4:11668565-11668584 Msa0837630:intron 35.0%
CGAATCAAGGAGTTTAAGTA+AGG + chr5_4:11668661-11668680 Msa0837630:intron 35.0%
!! TTGATAATGGGCATGGAAAT+TGG - chr5_4:11668744-11668763 None:intergenic 35.0%
!! GGAATGAAAGGGTTGATAAT+GGG - chr5_4:11668756-11668775 None:intergenic 35.0%
!! AGGAATGAAAGGGTTGATAA+TGG - chr5_4:11668757-11668776 None:intergenic 35.0%
! TTATTGATTGAAAAGGGAGG+AGG - chr5_4:11668854-11668873 None:intergenic 35.0%
!! TATTGATAACGAACTTGGGT+TGG - chr5_4:11668988-11669007 None:intergenic 35.0%
ACTTTCTATTTCCACAGAGA+AGG + chr5_4:11669093-11669112 Msa0837630:intron 35.0%
! AGAAGGTGCAAAAGTAACAT+GGG + chr5_4:11669110-11669129 Msa0837630:CDS 35.0%
GGGATATATTAATCGGATTC+TGG + chr5_4:11669131-11669150 Msa0837630:CDS 35.0%
ATCATCAATGGCAAAGTTTC+CGG + chr5_4:11669176-11669195 Msa0837630:CDS 35.0%
TAAATTATAGTACCTTGGCC+AGG + chr5_4:11669235-11669254 Msa0837630:CDS 35.0%
AAATTATAGTACCTTGGCCA+GGG + chr5_4:11669236-11669255 Msa0837630:CDS 35.0%
AAGTCTGTTGGGATTCAAAA+TGG + chr5_4:11669264-11669283 Msa0837630:CDS 35.0%
ACTATTCTTCTCTGCAATGA+GGG - chr5_4:11669312-11669331 None:intergenic 35.0%
GAAGAATAGTGCATTTAGCA+CGG + chr5_4:11669322-11669341 Msa0837630:CDS 35.0%
AAGAATAGTGCATTTAGCAC+GGG + chr5_4:11669323-11669342 Msa0837630:CDS 35.0%
! CTCACTTTAAAGGGAAAAGT+GGG - chr5_4:11669941-11669960 None:intergenic 35.0%
GATTTAGTGCCTCACTTTAA+AGG - chr5_4:11669951-11669970 None:intergenic 35.0%
! ACTGATAGTGAAACGTGATA+TGG - chr5_4:11669973-11669992 None:intergenic 35.0%
TTGGATTATGCAATGATGAC+TGG + chr5_4:11670065-11670084 Msa0837630:CDS 35.0%
TCCTTATCTGTAGTAACAAG+TGG + chr5_4:11670444-11670463 Msa0837630:intron 35.0%
!! AATGCATTGCTTTTCAGAAC+TGG + chr5_4:11670583-11670602 Msa0837630:CDS 35.0%
! AATTGTTGATTACAAGGTGG+TGG + chr5_4:11670975-11670994 Msa0837630:CDS 35.0%
TTGTTACATTTGATCAGGCA+GGG - chr5_4:11671041-11671060 None:intergenic 35.0%
!! GCTAAAACTTGCTATCTATG+TGG - chr5_4:11671125-11671144 None:intergenic 35.0%
CCATCCATGTAGATTCTTAT+TGG - chr5_4:11671374-11671393 None:intergenic 35.0%
CCAATAAGAATCTACATGGA+TGG + chr5_4:11671371-11671390 Msa0837630:three_prime_UTR 35.0%
GAGGCATGAGGTTAATTTAG+CGG - chr5_4:11664552-11664571 None:intergenic 40.0%
AAGAAAGATTCGGAGTAAGC+GGG - chr5_4:11664623-11664642 None:intergenic 40.0%
GAAGAAAGATTCGGAGTAAG+CGG - chr5_4:11664624-11664643 None:intergenic 40.0%
GGAAGGTGAAGAAGAGAAAA+AGG - chr5_4:11664654-11664673 None:intergenic 40.0%
! TTATCAGATGATTGGTCCGT+TGG - chr5_4:11664689-11664708 None:intergenic 40.0%
GGATCAAAACCGGACTTATT+AGG - chr5_4:11664743-11664762 None:intergenic 40.0%
!! TTTTCTAAGCTGGTGACGAT+AGG + chr5_4:11665099-11665118 Msa0837630:intron 40.0%
TAGGTTGCTCGTGAATTGTT+TGG + chr5_4:11665118-11665137 Msa0837630:intron 40.0%
AGGTTGCTCGTGAATTGTTT+GGG + chr5_4:11665119-11665138 Msa0837630:intron 40.0%
CAACGGAAAACTAGCAAATG+GGG + chr5_4:11665515-11665534 Msa0837630:intron 40.0%
TTATTGCACTTATGGCCTAG+GGG - chr5_4:11665654-11665673 None:intergenic 40.0%
GTTATTGCACTTATGGCCTA+GGG - chr5_4:11665655-11665674 None:intergenic 40.0%
TGTTATTGCACTTATGGCCT+AGG - chr5_4:11665656-11665675 None:intergenic 40.0%
TAATACAAGAGCAGAACCAG+AGG + chr5_4:11665821-11665840 Msa0837630:CDS 40.0%
ATTGGCAAGGAAAAGAATGC+AGG + chr5_4:11665873-11665892 Msa0837630:CDS 40.0%
CAGCAATTGTCAAGAACCAT+GGG - chr5_4:11666220-11666239 None:intergenic 40.0%
TCAGCAATTGTCAAGAACCA+TGG - chr5_4:11666221-11666240 None:intergenic 40.0%
CCTTTAGTAGTCTAACTACG+GGG + chr5_4:11666306-11666325 Msa0837630:intron 40.0%
!! TCTTCGGTGCCAATTTAAGT+GGG + chr5_4:11666413-11666432 Msa0837630:intron 40.0%
CTTCATGATCTGTCTGCAAA+TGG - chr5_4:11666666-11666685 None:intergenic 40.0%
AAGGCGACATAATGTTGAGT+TGG + chr5_4:11666690-11666709 Msa0837630:CDS 40.0%
CAAAAGACTTCTCTTGCATC+TGG - chr5_4:11666717-11666736 None:intergenic 40.0%
CCTCTGTCAATTGCGTAAAA+AGG - chr5_4:11666873-11666892 None:intergenic 40.0%
! CCTTTTTACGCAATTGACAG+AGG + chr5_4:11666870-11666889 Msa0837630:CDS 40.0%
TTTCTCTTTAAGCTCTCTCC+TGG - chr5_4:11666902-11666921 None:intergenic 40.0%
AGAGCTTAAAGAGAAACTGC+AGG + chr5_4:11666906-11666925 Msa0837630:CDS 40.0%
GAGCTTAAAGAGAAACTGCA+GGG + chr5_4:11666907-11666926 Msa0837630:CDS 40.0%
AGCTTAAAGAGAAACTGCAG+GGG + chr5_4:11666908-11666927 Msa0837630:CDS 40.0%
! AGGGGGATACATAGTTCTTT+TGG + chr5_4:11667093-11667112 Msa0837630:intron 40.0%
TATGTAGACGCAAACATGGA+AGG - chr5_4:11667550-11667569 None:intergenic 40.0%
CAGATATGTAGACGCAAACA+TGG - chr5_4:11667554-11667573 None:intergenic 40.0%
CATGTTTGCGTCTACATATC+TGG + chr5_4:11667552-11667571 Msa0837630:intron 40.0%
TCTTCTGTAATTTCCATCGC+TGG + chr5_4:11667579-11667598 Msa0837630:intron 40.0%
TTGTATAGGGAAAGTCTTGC+TGG + chr5_4:11667638-11667657 Msa0837630:intron 40.0%
TGTTTGACTAGTAGGACTTG+TGG + chr5_4:11667776-11667795 Msa0837630:intron 40.0%
TAGTAGGACTTGTGGTTGAT+TGG + chr5_4:11667784-11667803 Msa0837630:intron 40.0%
ATATGGTTCGTAAGTGGCAT+GGG - chr5_4:11667820-11667839 None:intergenic 40.0%
AATATGGTTCGTAAGTGGCA+TGG - chr5_4:11667821-11667840 None:intergenic 40.0%
! TTTGGTTTCTTTCGTTGCCT+AGG + chr5_4:11667852-11667871 Msa0837630:intron 40.0%
CTAGTTGTTACATGCTTGCA+AGG + chr5_4:11667880-11667899 Msa0837630:intron 40.0%
AGTACAGTGTTGTCAAATGG+TGG + chr5_4:11668155-11668174 Msa0837630:intron 40.0%
GTTCAAATTCTGCTAGGCTA+CGG - chr5_4:11668200-11668219 None:intergenic 40.0%
CACTGAGTTTGAAAGTCTGT+TGG + chr5_4:11668414-11668433 Msa0837630:intron 40.0%
CAAGTGTAATGTTTGGCAGA+AGG - chr5_4:11668458-11668477 None:intergenic 40.0%
TCTATGTTACGCCACAGAAA+AGG + chr5_4:11668700-11668719 Msa0837630:intron 40.0%
TATGGGGTCTAGGAATGAAA+GGG - chr5_4:11668767-11668786 None:intergenic 40.0%
TTATGGGGTCTAGGAATGAA+AGG - chr5_4:11668768-11668787 None:intergenic 40.0%
! ATTCTCACCGGTGTCAATTT+AGG - chr5_4:11668914-11668933 None:intergenic 40.0%
!! TTACTTTTGCACCTTCTCTG+TGG - chr5_4:11669107-11669126 None:intergenic 40.0%
! GAGAAGGTGCAAAAGTAACA+TGG + chr5_4:11669109-11669128 Msa0837630:intron 40.0%
! GAAGGTGCAAAAGTAACATG+GGG + chr5_4:11669111-11669130 Msa0837630:CDS 40.0%
ATTGATCCGGGAATCATCAA+TGG + chr5_4:11669164-11669183 Msa0837630:CDS 40.0%
! ACTTTGCCATTGATGATTCC+CGG - chr5_4:11669173-11669192 None:intergenic 40.0%
TCATCAATGGCAAAGTTTCC+GGG + chr5_4:11669177-11669196 Msa0837630:CDS 40.0%
CCAGGGAAAAAAAGTCTGTT+GGG + chr5_4:11669253-11669272 Msa0837630:CDS 40.0%
GTTGGGATTCAAAATGGTCT+TGG + chr5_4:11669270-11669289 Msa0837630:CDS 40.0%
CACTATTCTTCTCTGCAATG+AGG - chr5_4:11669313-11669332 None:intergenic 40.0%
TGGTAAAACCATGGTTGCAA+GGG + chr5_4:11669413-11669432 Msa0837630:CDS 40.0%
! TTGAGTTTGTACCGACAAGT+TGG + chr5_4:11669583-11669602 Msa0837630:intron 40.0%
AGGAATTCATGCCAACTTGT+CGG - chr5_4:11669597-11669616 None:intergenic 40.0%
!! CTGTTTCTGCTATTAAGCCA+TGG + chr5_4:11669724-11669743 Msa0837630:intron 40.0%
! CCTCACTTTAAAGGGAAAAG+TGG - chr5_4:11669942-11669961 None:intergenic 40.0%
!!! CCACTTTTCCCTTTAAAGTG+AGG + chr5_4:11669939-11669958 Msa0837630:intron 40.0%
GATTATGCAATGATGACTGG+AGG + chr5_4:11670068-11670087 Msa0837630:CDS 40.0%
!! GAATTTTGGTAACAGCCTGT+GGG - chr5_4:11670112-11670131 None:intergenic 40.0%
!! TGAATTTTGGTAACAGCCTG+TGG - chr5_4:11670113-11670132 None:intergenic 40.0%
TGGGCCAAGAAATCTAAAAG+AGG + chr5_4:11670146-11670165 Msa0837630:CDS 40.0%
! CAGGCCTCTTTTAGATTTCT+TGG - chr5_4:11670153-11670172 None:intergenic 40.0%
CCTCGTCAATAAAAAGCAAC+AGG - chr5_4:11670172-11670191 None:intergenic 40.0%
!!! CCTGTTGCTTTTTATTGACG+AGG + chr5_4:11670169-11670188 Msa0837630:CDS 40.0%
ATATTAAAGCAGCGCTACTC+AGG - chr5_4:11670269-11670288 None:intergenic 40.0%
! GCCACTTGTTACTACAGATA+AGG - chr5_4:11670448-11670467 None:intergenic 40.0%
ATTGCACTATCAAGATCTCC+TGG - chr5_4:11670652-11670671 None:intergenic 40.0%
TGATGAAAGTAATGGCTCCA+AGG + chr5_4:11670765-11670784 Msa0837630:CDS 40.0%
GATGAAAGTAATGGCTCCAA+GGG + chr5_4:11670766-11670785 Msa0837630:CDS 40.0%
ATGAAAGTAATGGCTCCAAG+GGG + chr5_4:11670767-11670786 Msa0837630:CDS 40.0%
CTTCATAAATAATCCCCCCT+TGG - chr5_4:11670785-11670804 None:intergenic 40.0%
! AGAAAACCCCTCTGTTTTCT+TGG - chr5_4:11670866-11670885 None:intergenic 40.0%
! AAGAAAACAGAGGGGTTTTC+TGG + chr5_4:11670865-11670884 Msa0837630:CDS 40.0%
ACATCATCAGCGGTTAAAAC+TGG + chr5_4:11670999-11671018 Msa0837630:CDS 40.0%
GTTGTTACATTTGATCAGGC+AGG - chr5_4:11671042-11671061 None:intergenic 40.0%
GTGGCTCATAAAATGCATCT+CGG - chr5_4:11671106-11671125 None:intergenic 40.0%
CCATATAGCACGAAAAGAAC+AGG - chr5_4:11671226-11671245 None:intergenic 40.0%
! CCTGTTCTTTTCGTGCTATA+TGG + chr5_4:11671223-11671242 Msa0837630:three_prime_UTR 40.0%
!!! GGCGGACATTGTTTTGGTAT+TGG - chr5_4:11664531-11664550 None:intergenic 45.0%
! TTTAGCGGCGGACATTGTTT+TGG - chr5_4:11664537-11664556 None:intergenic 45.0%
GCATGAGGTTAATTTAGCGG+CGG - chr5_4:11664549-11664568 None:intergenic 45.0%
GGGGAAACGGAAGAAAGATT+CGG - chr5_4:11664633-11664652 None:intergenic 45.0%
GACTTATTAGGTTCTTCCGC+CGG - chr5_4:11664731-11664750 None:intergenic 45.0%
GCGGAAGAACCTAATAAGTC+CGG + chr5_4:11664731-11664750 Msa0837630:CDS 45.0%
GCAGCTCTTTCTAACGATTC+AGG - chr5_4:11664764-11664783 None:intergenic 45.0%
GAAGTGACTATGACCCTGTT+TGG - chr5_4:11665357-11665376 None:intergenic 45.0%
TATTGCACTTATGGCCTAGG+GGG - chr5_4:11665653-11665672 None:intergenic 45.0%
GCAGGATAGGTTGCGTAAAA+TGG + chr5_4:11665780-11665799 Msa0837630:intron 45.0%
AAGGAAAAGAATGCAGGTGC+AGG + chr5_4:11665879-11665898 Msa0837630:intron 45.0%
CCCCGTAGTTAGACTACTAA+AGG - chr5_4:11666309-11666328 None:intergenic 45.0%
ACAATTCAACCCACTTGGGT+TGG + chr5_4:11666329-11666348 Msa0837630:CDS 45.0%
GTCTCAGGTTCGATTCTCTT+CGG + chr5_4:11666397-11666416 Msa0837630:intron 45.0%
!! CTCTTCGGTGCCAATTTAAG+TGG + chr5_4:11666412-11666431 Msa0837630:intron 45.0%
TGAACACCCAGAGAAGAAAG+TGG - chr5_4:11666491-11666510 None:intergenic 45.0%
! GTCTTTTGTACGAAAGGAGC+AGG + chr5_4:11666729-11666748 Msa0837630:CDS 45.0%
TGTGACTCAGCAACAGAAAG+CGG + chr5_4:11666792-11666811 Msa0837630:CDS 45.0%
AATTGACAGAGGAGCAAACC+AGG + chr5_4:11666881-11666900 Msa0837630:CDS 45.0%
GCTTAAAGAGAAACTGCAGG+GGG + chr5_4:11666909-11666928 Msa0837630:CDS 45.0%
TGCAGGGGGAAAGAGATAAA+TGG + chr5_4:11666923-11666942 Msa0837630:CDS 45.0%
!!! GTGAGTGGTGTCATGAGTTT+TGG - chr5_4:11667525-11667544 None:intergenic 45.0%
TGTAACAACTAGCAACGCCT+AGG - chr5_4:11667872-11667891 None:intergenic 45.0%
! CGGCTGCTTGCACTTTTATT+TGG + chr5_4:11667998-11668017 Msa0837630:intron 45.0%
TACTAAATGCAGGCGGTCTA+AGG + chr5_4:11668256-11668275 Msa0837630:intron 45.0%
!! TCACTACAAGTGCCGAATCA+AGG + chr5_4:11668648-11668667 Msa0837630:intron 45.0%
! AGTAGCGACAACCTTTTCTG+TGG - chr5_4:11668714-11668733 None:intergenic 45.0%
!! GAAAGGGTTGATAATGGGCA+TGG - chr5_4:11668751-11668770 None:intergenic 45.0%
TGATTGAAAAGGGAGGAGGA+GGG - chr5_4:11668850-11668869 None:intergenic 45.0%
TTGATTGAAAAGGGAGGAGG+AGG - chr5_4:11668851-11668870 None:intergenic 45.0%
TAGCCCACCTAAATTGACAC+CGG + chr5_4:11668904-11668923 Msa0837630:intron 45.0%
! TCACCGGTGTCAATTTAGGT+GGG - chr5_4:11668910-11668929 None:intergenic 45.0%
GATGATTCCCGGATCAATGA+TGG - chr5_4:11669162-11669181 None:intergenic 45.0%
TGAGACATGATCCTTGATCC+CGG - chr5_4:11669198-11669217 None:intergenic 45.0%
!!! AGACTTTTTTTCCCTGGCCA+AGG - chr5_4:11669250-11669269 None:intergenic 45.0%
GCCAGGGAAAAAAAGTCTGT+TGG + chr5_4:11669252-11669271 Msa0837630:CDS 45.0%
!!! CCCAACAGACTTTTTTTCCC+TGG - chr5_4:11669256-11669275 None:intergenic 45.0%
!!! ATGCTTTTTTATGGGCCTCC+TGG + chr5_4:11669387-11669406 Msa0837630:CDS 45.0%
!!! TGCTTTTTTATGGGCCTCCT+GGG + chr5_4:11669388-11669407 Msa0837630:CDS 45.0%
CTGGTAAAACCATGGTTGCA+AGG + chr5_4:11669412-11669431 Msa0837630:CDS 45.0%
! AGCTATTTCCCTTGCAACCA+TGG - chr5_4:11669424-11669443 None:intergenic 45.0%
! GACAAGTTGGCATGAATTCC+TGG + chr5_4:11669596-11669615 Msa0837630:intron 45.0%
TTGACACTGCTGCCTACAAA+TGG + chr5_4:11669682-11669701 Msa0837630:intron 45.0%
ACTGCAAGACTTACTCGCAA+AGG - chr5_4:11670205-11670224 None:intergenic 45.0%
GTGATTGAATTCCCACTTCC+AGG + chr5_4:11670691-11670710 Msa0837630:CDS 45.0%
TGAAAGTAATGGCTCCAAGG+GGG + chr5_4:11670768-11670787 Msa0837630:CDS 45.0%
ATCAGAAGACGTGCTGAAAG+AGG + chr5_4:11670837-11670856 Msa0837630:CDS 45.0%
CCATGAGTTTGGCTATCTCA+CGG - chr5_4:11670891-11670910 None:intergenic 45.0%
TTAAAACTGGCAGCTGAAGG+CGG + chr5_4:11671012-11671031 Msa0837630:CDS 45.0%
TTACATTTGATCAGGCAGGG+AGG - chr5_4:11671038-11671057 None:intergenic 45.0%
ACGAAAAGAACAGGTTCTGC+TGG - chr5_4:11671217-11671236 None:intergenic 45.0%
ATTTCTACGCTCTCAAGACC+TGG - chr5_4:11671258-11671277 None:intergenic 45.0%
!!! TTTTTAATTATCATTTTTTT+TGG + chr5_4:11664829-11664848 Msa0837630:intron 5.0%
!!! ATAATTTAAAACTTTATTTT+TGG - chr5_4:11669223-11669242 None:intergenic 5.0%
TTCCGCTAAAACCCTAACCG+AGG + chr5_4:11664471-11664490 Msa0837630:five_prime_UTR 50.0%
TCCGCTAAAACCCTAACCGA+GGG + chr5_4:11664472-11664491 Msa0837630:five_prime_UTR 50.0%
!! ACCCTCGGTTAGGGTTTTAG+CGG - chr5_4:11664476-11664495 None:intergenic 50.0%
CGAGGTTAAACCCTCGGTTA+GGG - chr5_4:11664485-11664504 None:intergenic 50.0%
GGAAATGGAGGTTCAGAGCA+TGG - chr5_4:11664510-11664529 None:intergenic 50.0%
AGATTCGGAGTAAGCGGGAT+TGG - chr5_4:11664618-11664637 None:intergenic 50.0%
TTCCAATTCACCTCCGCCAA+CGG + chr5_4:11664670-11664689 Msa0837630:CDS 50.0%
! TCAGATGATTGGTCCGTTGG+CGG - chr5_4:11664686-11664705 None:intergenic 50.0%
TTATTAGGTTCTTCCGCCGG+CGG - chr5_4:11664728-11664747 None:intergenic 50.0%
ATCATCATCATCCTCCCCCT+AGG + chr5_4:11665636-11665655 Msa0837630:intron 50.0%
GGGGACAATTCAACCCACTT+GGG + chr5_4:11666325-11666344 Msa0837630:CDS 50.0%
ACGAAAGGAGCAGGCAAGAA+AGG + chr5_4:11666738-11666757 Msa0837630:CDS 50.0%
CAAACATGGAAGGACGTGAG+TGG - chr5_4:11667540-11667559 None:intergenic 50.0%
CACCGCTCTCTACTAAATGC+AGG + chr5_4:11668246-11668265 Msa0837630:intron 50.0%
CGCCTGCATTTAGTAGAGAG+CGG - chr5_4:11668251-11668270 None:intergenic 50.0%
CGCTCTCTACTAAATGCAGG+CGG + chr5_4:11668249-11668268 Msa0837630:intron 50.0%
! CTGCAGGAGTATATACGACG+AGG + chr5_4:11668337-11668356 Msa0837630:CDS 50.0%
ATTGAAAAGGGAGGAGGAGG+GGG - chr5_4:11668848-11668867 None:intergenic 50.0%
GATTGAAAAGGGAGGAGGAG+GGG - chr5_4:11668849-11668868 None:intergenic 50.0%
! CTCACCGGTGTCAATTTAGG+TGG - chr5_4:11668911-11668930 None:intergenic 50.0%
CTCTCAGGTTCGATTCTCAC+CGG - chr5_4:11668926-11668945 None:intergenic 50.0%
TGAGAATCGAACCTGAGAGG+AGG + chr5_4:11668927-11668946 Msa0837630:intron 50.0%
!! TGGCCTAGTGGTATTGGCTT+GGG - chr5_4:11668968-11668987 None:intergenic 50.0%
!! TTGGCCTAGTGGTATTGGCT+TGG - chr5_4:11668969-11668988 None:intergenic 50.0%
!! TTGGGTTGGCCTAGTGGTAT+TGG - chr5_4:11668974-11668993 None:intergenic 50.0%
TGGCAAAGTTTCCGGGATCA+AGG + chr5_4:11669184-11669203 Msa0837630:CDS 50.0%
ACGGGCAACATCAAACACGA+AGG + chr5_4:11669341-11669360 Msa0837630:CDS 50.0%
ATCAAACACGAAGGCCCATC+AGG + chr5_4:11669350-11669369 Msa0837630:CDS 50.0%
GTTACGAAACGGTGCCTGAT+GGG - chr5_4:11669367-11669386 None:intergenic 50.0%
TGTTACGAAACGGTGCCTGA+TGG - chr5_4:11669368-11669387 None:intergenic 50.0%
!! ATGGTTTTACCAGTCCCAGG+AGG - chr5_4:11669405-11669424 None:intergenic 50.0%
! TCCTGGGACTGGTAAAACCA+TGG + chr5_4:11669404-11669423 Msa0837630:CDS 50.0%
!! ACCATGGTTTTACCAGTCCC+AGG - chr5_4:11669408-11669427 None:intergenic 50.0%
TGAATTCCCACTTCCAGGAG+AGG + chr5_4:11670696-11670715 Msa0837630:CDS 50.0%
TTAAGACGTTCCTCCTCTCC+TGG - chr5_4:11670712-11670731 None:intergenic 50.0%
GAAAGTAATGGCTCCAAGGG+GGG + chr5_4:11670769-11670788 Msa0837630:CDS 50.0%
AGAGGCTGCCAAGAAAACAG+AGG + chr5_4:11670855-11670874 Msa0837630:CDS 50.0%
GAGGCTGCCAAGAAAACAGA+GGG + chr5_4:11670856-11670875 Msa0837630:CDS 50.0%
AGGCTGCCAAGAAAACAGAG+GGG + chr5_4:11670857-11670876 Msa0837630:CDS 50.0%
CCGTGAGATAGCCAAACTCA+TGG + chr5_4:11670888-11670907 Msa0837630:CDS 50.0%
TTAGAATCCAAGGCGCAGTC+AGG - chr5_4:11670943-11670962 None:intergenic 50.0%
!! AGGTGGTGGAACATCATCAG+CGG + chr5_4:11670989-11671008 Msa0837630:CDS 50.0%
CGGTTAAAACTGGCAGCTGA+AGG + chr5_4:11671009-11671028 Msa0837630:CDS 50.0%
GCTATATGGAGCAAGAAGCC+AGG + chr5_4:11671237-11671256 Msa0837630:three_prime_UTR 50.0%
GCGAGGTTAAACCCTCGGTT+AGG - chr5_4:11664486-11664505 None:intergenic 55.0%
ATGGCGCGAGGTTAAACCCT+CGG - chr5_4:11664491-11664510 None:intergenic 55.0%
GTAAGCGGGATTGGATTGCG+AGG - chr5_4:11664609-11664628 None:intergenic 55.0%
GTTGGCGGAGGTGAATTGGA+AGG - chr5_4:11664671-11664690 None:intergenic 55.0%
ACAAGAGCAGAACCAGAGGC+AGG + chr5_4:11665825-11665844 Msa0837630:CDS 55.0%
CGGGGACAATTCAACCCACT+TGG + chr5_4:11666324-11666343 Msa0837630:CDS 55.0%
!! TTGGGTTGGCCTGGTGGTAT+TGG + chr5_4:11666343-11666362 Msa0837630:CDS 55.0%
!! TTGGCCTGGTGGTATTGGCT+TGG + chr5_4:11666348-11666367 Msa0837630:CDS 55.0%
!! TGGCCTGGTGGTATTGGCTT+GGG + chr5_4:11666349-11666368 Msa0837630:CDS 55.0%
GAATCGAACCTGAGACCTCG+AGG - chr5_4:11666393-11666412 None:intergenic 55.0%
!! GAGAGCGGTGTCATCAATCG+CGG - chr5_4:11668236-11668255 None:intergenic 55.0%
GGAGCTACTGCATTAGCTGC+AGG + chr5_4:11668321-11668340 Msa0837630:CDS 55.0%
CGGTGAGAATCGAACCTGAG+AGG + chr5_4:11668924-11668943 Msa0837630:intron 55.0%
!! GTGGTATTGGCTTGGGACCT+GGG - chr5_4:11668961-11668980 None:intergenic 55.0%
!! AGTGGTATTGGCTTGGGACC+TGG - chr5_4:11668962-11668981 None:intergenic 55.0%
GGTCCCAAGCCAATACCACT+AGG + chr5_4:11668962-11668981 Msa0837630:intron 55.0%
!! ACGAACTTGGGTTGGCCTAG+TGG - chr5_4:11668980-11668999 None:intergenic 55.0%
TGGGGCAGCCATCATTGATC+CGG + chr5_4:11669151-11669170 Msa0837630:CDS 55.0%
! TTTTATGGGCCTCCTGGGAC+TGG + chr5_4:11669393-11669412 Msa0837630:CDS 55.0%
TGGAGGAGATGTTGCACCTC+TGG + chr5_4:11670085-11670104 Msa0837630:CDS 55.0%
GGAGGAGATGTTGCACCTCT+GGG + chr5_4:11670086-11670105 Msa0837630:CDS 55.0%
GTGCTTGCGACAAACAGACC+AGG + chr5_4:11670631-11670650 Msa0837630:CDS 55.0%
ATTCCCACTTCCAGGAGAGG+AGG + chr5_4:11670699-11670718 Msa0837630:CDS 55.0%
GTTCCTCCTCTCCTGGAAGT+GGG - chr5_4:11670705-11670724 None:intergenic 55.0%
TTGGACGCTGGCCATGAGTT+TGG - chr5_4:11670902-11670921 None:intergenic 55.0%
ATAGACAGCAGCTTGGACGC+TGG - chr5_4:11670914-11670933 None:intergenic 55.0%
AGCGTCCAAGCTGCTGTCTA+TGG + chr5_4:11670913-11670932 Msa0837630:CDS 55.0%
GCGTCCAAGCTGCTGTCTAT+GGG + chr5_4:11670914-11670933 Msa0837630:CDS 55.0%
GGAGATTGAAGCCGCTGCAG+CGG - chr5_4:11664588-11664607 None:intergenic 60.0%
GTCCGTTGGCGGAGGTGAAT+TGG - chr5_4:11664675-11664694 None:intergenic 60.0%
! GATGATTGGTCCGTTGGCGG+AGG - chr5_4:11664683-11664702 None:intergenic 60.0%
CAAATCGGATTCACCGCCGC+CGG + chr5_4:11664709-11664728 Msa0837630:CDS 60.0%
TGCACTTATGGCCTAGGGGG+AGG - chr5_4:11665650-11665669 None:intergenic 60.0%
GTAACACCTGAGCCTGCCTC+TGG - chr5_4:11665840-11665859 None:intergenic 60.0%
!! TCAACCCACTTGGGTTGGCC+TGG + chr5_4:11666334-11666353 Msa0837630:CDS 60.0%
ACCACCAGGCCAACCCAAGT+GGG - chr5_4:11666341-11666360 None:intergenic 60.0%
TACCACCAGGCCAACCCAAG+TGG - chr5_4:11666342-11666361 None:intergenic 60.0%
!! GGCCTGGTGGTATTGGCTTG+GGG + chr5_4:11666350-11666369 Msa0837630:CDS 60.0%
!! GTGGTATTGGCTTGGGGCCT+GGG + chr5_4:11666356-11666375 Msa0837630:CDS 60.0%
TCGAACCTGAGACCTCGAGG+AGG - chr5_4:11666390-11666409 None:intergenic 60.0%
GGGGCAGCCATCATTGATCC+GGG + chr5_4:11669152-11669171 Msa0837630:CDS 60.0%
CGTTCCTCCTCTCCTGGAAG+TGG - chr5_4:11670706-11670725 None:intergenic 60.0%
GACGCCCATAGACAGCAGCT+TGG - chr5_4:11670921-11670940 None:intergenic 60.0%
GAGGTTCAGAGCATGGCGCG+AGG - chr5_4:11664503-11664522 None:intergenic 65.0%
GATTGAAGCCGCTGCAGCGG+CGG - chr5_4:11664585-11664604 None:intergenic 65.0%
TTAGGTTCTTCCGCCGGCGG+CGG - chr5_4:11664725-11664744 None:intergenic 65.0%
GCAGAACCAGAGGCAGGCTC+AGG + chr5_4:11665831-11665850 Msa0837630:CDS 65.0%
!! ACCCACTTGGGTTGGCCTGG+TGG + chr5_4:11666337-11666356 Msa0837630:CDS 65.0%
GGCCCCAAGCCAATACCACC+AGG - chr5_4:11666355-11666374 None:intergenic 65.0%
!! GGTGGTATTGGCTTGGGGCC+TGG + chr5_4:11666355-11666374 Msa0837630:CDS 65.0%
! TCGAGGAGGAGCACACTCCC+AGG - chr5_4:11666376-11666395 None:intergenic 65.0%
! TGGGAGTGTGCTCCTCCTCG+AGG + chr5_4:11666375-11666394 Msa0837630:CDS 65.0%
GTGCTCCTCCTCGAGGTCTC+AGG + chr5_4:11666382-11666401 Msa0837630:intron 65.0%
GAAAAGGGAGGAGGAGGGGG+AGG - chr5_4:11668845-11668864 None:intergenic 65.0%
! GGGAGTGTGCTCCTCCTCTC+AGG - chr5_4:11668941-11668960 None:intergenic 65.0%
! GAGAGGAGGAGCACACTCCC+AGG + chr5_4:11668941-11668960 Msa0837630:intron 65.0%
TGTTGCACCTCTGGGCCCAC+AGG + chr5_4:11670094-11670113 Msa0837630:CDS 65.0%
GTAACAGCCTGTGGGCCCAG+AGG - chr5_4:11670104-11670123 None:intergenic 65.0%
ATCGGATTCACCGCCGCCGG+CGG + chr5_4:11664712-11664731 Msa0837630:CDS 70.0%
TGGGCGTCCTGACTGCGCCT+TGG + chr5_4:11670933-11670952 Msa0837630:CDS 70.0%
GGTGGCTGCGGCGAGGCATG+AGG - chr5_4:11664564-11664583 None:intergenic 75.0%
TGAAGCCGCTGCAGCGGCGG+TGG - chr5_4:11664582-11664601 None:intergenic 75.0%
! CGCTGCAGCGGCGGTGGCTG+CGG - chr5_4:11664576-11664595 None:intergenic 80.0%
! CGCAGCCACCGCCGCTGCAG+CGG + chr5_4:11664574-11664593 Msa0837630:CDS 80.0%
! CAGCGGCGGTGGCTGCGGCG+AGG - chr5_4:11664571-11664590 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 11664446 11671420 11664446 ID=Msa0837630;Name=Msa0837630
chr5_4 mRNA 11664446 11671420 11664446 ID=Msa0837630-mRNA-1;Parent=Msa0837630;Name=Msa0837630-mRNA-1;_AED=0.14;_eAED=0.14;_QI=96|0.75|0.88|0.88|1|1|9|373|657
chr5_4 exon 11664446 11664826 11664446 ID=Msa0837630-mRNA-1:exon:5061;Parent=Msa0837630-mRNA-1
chr5_4 exon 11664968 11665063 11664968 ID=Msa0837630-mRNA-1:exon:5062;Parent=Msa0837630-mRNA-1
chr5_4 exon 11665784 11665894 11665784 ID=Msa0837630-mRNA-1:exon:5063;Parent=Msa0837630-mRNA-1
chr5_4 exon 11666316 11666396 11666316 ID=Msa0837630-mRNA-1:exon:5064;Parent=Msa0837630-mRNA-1
chr5_4 exon 11666673 11666982 11666673 ID=Msa0837630-mRNA-1:exon:5065;Parent=Msa0837630-mRNA-1
chr5_4 exon 11668268 11668358 11668268 ID=Msa0837630-mRNA-1:exon:5066;Parent=Msa0837630-mRNA-1
chr5_4 exon 11669110 11669452 11669110 ID=Msa0837630-mRNA-1:exon:5067;Parent=Msa0837630-mRNA-1
chr5_4 exon 11670062 11670210 11670062 ID=Msa0837630-mRNA-1:exon:5068;Parent=Msa0837630-mRNA-1
chr5_4 exon 11670540 11671420 11670540 ID=Msa0837630-mRNA-1:exon:5069;Parent=Msa0837630-mRNA-1
chr5_4 five_prime_UTR 11664446 11664541 11664446 ID=Msa0837630-mRNA-1:five_prime_utr;Parent=Msa0837630-mRNA-1
chr5_4 CDS 11664542 11664826 11664542 ID=Msa0837630-mRNA-1:cds;Parent=Msa0837630-mRNA-1
chr5_4 CDS 11664968 11665063 11664968 ID=Msa0837630-mRNA-1:cds;Parent=Msa0837630-mRNA-1
chr5_4 CDS 11665784 11665894 11665784 ID=Msa0837630-mRNA-1:cds;Parent=Msa0837630-mRNA-1
chr5_4 CDS 11666316 11666396 11666316 ID=Msa0837630-mRNA-1:cds;Parent=Msa0837630-mRNA-1
chr5_4 CDS 11666673 11666982 11666673 ID=Msa0837630-mRNA-1:cds;Parent=Msa0837630-mRNA-1
chr5_4 CDS 11668268 11668358 11668268 ID=Msa0837630-mRNA-1:cds;Parent=Msa0837630-mRNA-1
chr5_4 CDS 11669110 11669452 11669110 ID=Msa0837630-mRNA-1:cds;Parent=Msa0837630-mRNA-1
chr5_4 CDS 11670062 11670210 11670062 ID=Msa0837630-mRNA-1:cds;Parent=Msa0837630-mRNA-1
chr5_4 CDS 11670540 11671047 11670540 ID=Msa0837630-mRNA-1:cds;Parent=Msa0837630-mRNA-1
chr5_4 three_prime_UTR 11671048 11671420 11671048 ID=Msa0837630-mRNA-1:three_prime_utr;Parent=Msa0837630-mRNA-1
Gene Sequence

>Msa0837630

ATGTCCGCCGCTAAATTAACCTCATGCCTCGCCGCAGCCACCGCCGCTGCAGCGGCTTCAATCTCCTCGCAATCCAATCCCGCTTACTCCGAATCTTTCTTCCGTTTCCCCTTTTTCTCTTCTTCACCTTCCAATTCACCTCCGCCAACGGACCAATCATCTGATAACAAATCGGATTCACCGCCGCCGGCGGAAGAACCTAATAAGTCCGGTTTTGATCCTGAATCGTTAGAAAGAGCTGCTAAAGCTCTCCGTGAAATCAATAATTCTCCTCACGCTAAAAAGGTGTTTGATTTAATGCGTAAACAAGAACAATCTCGTCTTGCTGAGTTAGATGCTGAAAAAGTTAATTATGAACTTATTCAGACTCAAGGAGATATTGATAGGTTGCGTAAAATGGCTGAAGAACAACGAAATCTAATACAAGAGCAGAACCAGAGGCAGGCTCAGGTGTTACGATTTGAAGATGAATTGGCAAGGAAAAGAATGCAGTCTAACTACGGGGACAATTCAACCCACTTGGGTTGGCCTGGTGGTATTGGCTTGGGGCCTGGGAGTGTGCTCCTCCTCGAGACAGATCATGAAGATCAAAGGCGACATAATGTTGAGTTGGTCCAGATGCAAGAGAAGTCTTTTGTACGAAAGGAGCAGGCAAGAAAGGATTCCGAAGAACAGATTCAAGCTAAGAAACGTGTGACTCAGCAACAGAAAGCGGAAATAGAAAAAGAAACTGCTAGAACTAAGGAAATTGCAGAGGCTGAAAAACGAATCCTTTTTACGCAATTGACAGAGGAGCAAACCAGGAGAGAGCTTAAAGAGAAACTGCAGGGGGAAAGAGATAAATGGATTGCTTCAATTAATGCTACTTTTAGTCATATTGAAGGCGGTCTAAGGATATTATTGACCGATAGGGACAAATTGCTTATGACTGTTGGTGGAGCTACTGCATTAGCTGCAGGAGTATATACGACGAGAGAAGGTGCAAAAGTAACATGGGGATATATTAATCGGATTCTGGGGCAGCCATCATTGATCCGGGAATCATCAATGGCAAAGTTTCCGGGATCAAGGATCATGTCTCAAGCCAAAAATAAAGTTTTAAATTATAGTACCTTGGCCAGGGAAAAAAAGTCTGTTGGGATTCAAAATGGTCTTGGAAATGTAATCTTGCATCCCTCATTGCAGAGAAGAATAGTGCATTTAGCACGGGCAACATCAAACACGAAGGCCCATCAGGCACCGTTTCGTAACATGCTTTTTTATGGGCCTCCTGGGACTGGTAAAACCATGGTTGCAAGGGAAATAGCTAGAAAATCGGGTTTGGATTATGCAATGATGACTGGAGGAGATGTTGCACCTCTGGGCCCACAGGCTGTTACCAAAATTCACGAGATATTTGATTGGGCCAAGAAATCTAAAAGAGGCCTGTTGCTTTTTATTGACGAGGCAGATGCTTTCCTTTGCGAGCGTAATAGCTCACACATGAGTGAAGCTCAACGAAGTGCCCTAAATGCATTGCTTTTCAGAACTGGTGATCAGTCTAGAGACATAGTACTTGTGCTTGCGACAAACAGACCAGGAGATCTTGATAGTGCAATTACTGATCGCATTGATGAAGTGATTGAATTCCCACTTCCAGGAGAGGAGGAACGTCTTAAGTTATTGAATCTCTATTTGAACAAGTATCTATGTGATGAAAGTAATGGCTCCAAGGGGGGATTATTTATGAAGAAGCAGCCCCAGAAAATTACCATAAAAGATTTATCAGAAGACGTGCTGAAAGAGGCTGCCAAGAAAACAGAGGGGTTTTCTGGCCGTGAGATAGCCAAACTCATGGCCAGCGTCCAAGCTGCTGTCTATGGGCGTCCTGACTGCGCCTTGGATTCTAAGTTGTTTAGAGAAATTGTTGATTACAAGGTGGTGGAACATCATCAGCGGTTAAAACTGGCAGCTGAAGGCGGCCTCCCTGCCTGA
Protein sequence

>Msa0837630

MSAAKLTSCLAAATAAAAASISSQSNPAYSESFFRFPFFSSSPSNSPPPTDQSSDNKSDSPPPAEEPNKSGFDPESLERAAKALREINNSPHAKKVFDLMRKQEQSRLAELDAEKVNYELIQTQGDIDRLRKMAEEQRNLIQEQNQRQAQVLRFEDELARKRMQSNYGDNSTHLGWPGGIGLGPGSVLLLETDHEDQRRHNVELVQMQEKSFVRKEQARKDSEEQIQAKKRVTQQQKAEIEKETARTKEIAEAEKRILFTQLTEEQTRRELKEKLQGERDKWIASINATFSHIEGGLRILLTDRDKLLMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSRIMSQAKNKVLNYSTLAREKKSVGIQNGLGNVILHPSLQRRIVHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSKRGLLLFIDEADAFLCERNSSHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPGEEERLKLLNLYLNKYLCDESNGSKGGLFMKKQPQKITIKDLSEDVLKEAAKKTEGFSGREIAKLMASVQAAVYGRPDCALDSKLFREIVDYKVVEHHQRLKLAAEGGLPA*