Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843790 | XP_039690245.1 | 93.587 | 499 | 29 | 2 | 1 | 499 | 1 | 496 | 0.0 | 905 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843790 | sp|Q67Y69|WDL7_ARATH | 60.656 | 61 | 24 | 0 | 8 | 68 | 16 | 76 | 2.90e-16 | 84.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843790 | G7K5M5 | 91.211 | 512 | 29 | 3 | 1 | 499 | 1 | 509 | 0.0 | 898 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0108390 | Msa0843790 | 0.816143 | 6.437740e-52 | -8.615850e-47 |
| Msa0689760 | Msa0843790 | 0.806150 | 9.457929e-50 | -8.615850e-47 |
| Msa0710270 | Msa0843790 | 0.803473 | 3.428707e-49 | -8.615850e-47 |
| Msa0716860 | Msa0843790 | 0.808076 | 3.699150e-50 | -8.615850e-47 |
| Msa0795070 | Msa0843790 | 0.800553 | 1.365724e-48 | -8.615850e-47 |
| Msa0804730 | Msa0843790 | 0.801859 | 7.381051e-49 | -8.615850e-47 |
| Msa0133820 | Msa0843790 | 0.804742 | 1.866402e-49 | -8.615850e-47 |
| Msa0144360 | Msa0843790 | 0.802510 | 5.422039e-49 | -8.615850e-47 |
| Msa0165440 | Msa0843790 | 0.801896 | 7.252794e-49 | -8.615850e-47 |
| Msa0187030 | Msa0843790 | 0.810522 | 1.105562e-50 | -8.615850e-47 |
| Msa0369850 | Msa0843790 | 0.800944 | 1.136134e-48 | -8.615850e-47 |
| Msa0403660 | Msa0843790 | 0.812324 | 4.490722e-51 | -8.615850e-47 |
| Msa0410500 | Msa0843790 | 0.812983 | 3.220586e-51 | -8.615850e-47 |
| Msa0411410 | Msa0843790 | 0.803161 | 3.978208e-49 | -8.615850e-47 |
| Msa0479200 | Msa0843790 | 0.801660 | 8.106836e-49 | -8.615850e-47 |
| Msa0363810 | Msa0843790 | 0.803589 | 3.244195e-49 | -8.615850e-47 |
| Msa0483740 | Msa0843790 | 0.818489 | 1.908817e-52 | -8.615850e-47 |
| Msa0513160 | Msa0843790 | 0.803313 | 3.699434e-49 | -8.615850e-47 |
| Msa0557050 | Msa0843790 | 0.803583 | 3.252394e-49 | -8.615850e-47 |
| Msa0576680 | Msa0843790 | 0.805097 | 1.573657e-49 | -8.615850e-47 |
| Msa0581690 | Msa0843790 | 0.809048 | 2.294208e-50 | -8.615850e-47 |
| Msa0843790 | Msa1031930 | 0.801881 | 7.304974e-49 | -8.615850e-47 |
| Msa0843790 | Msa1050910 | 0.800269 | 1.559846e-48 | -8.615850e-47 |
| Msa0843790 | Msa1282500 | 0.813911 | 2.013869e-51 | -8.615850e-47 |
| Msa0843790 | Msa1320820 | 0.811963 | 5.382901e-51 | -8.615850e-47 |
| Msa0843790 | Msa1332000 | 0.807201 | 5.673536e-50 | -8.615850e-47 |
| Msa0843790 | Msa1366300 | 0.805089 | 1.579397e-49 | -8.615850e-47 |
| Msa0843790 | Msa1420250 | 0.801074 | 1.068851e-48 | -8.615850e-47 |
| Msa0843790 | Msa1433220 | 0.805977 | 1.028572e-49 | -8.615850e-47 |
| Msa0843790 | Msa1445190 | 0.800903 | 1.158379e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843790 | MtrunA17_Chr5g0414961 | 91.211 | 512 | 29 | 3 | 1 | 499 | 112 | 620 | 0.0 | 897 |
| Msa0843790 | MtrunA17_Chr3g0123121 | 34.524 | 252 | 124 | 10 | 10 | 244 | 31 | 258 | 6.35e-22 | 99.4 |
| Msa0843790 | MtrunA17_Chr6g0458401 | 67.857 | 56 | 18 | 0 | 7 | 62 | 27 | 82 | 4.53e-19 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843790 | AT1G70100.4 | 37.747 | 506 | 209 | 24 | 6 | 457 | 20 | 473 | 9.77e-58 | 199 |
| Msa0843790 | AT1G70100.3 | 37.945 | 506 | 208 | 24 | 6 | 457 | 20 | 473 | 1.63e-57 | 199 |
| Msa0843790 | AT1G70100.6 | 37.945 | 506 | 208 | 24 | 6 | 457 | 20 | 473 | 1.63e-57 | 199 |
| Msa0843790 | AT1G70100.5 | 37.755 | 490 | 203 | 24 | 6 | 441 | 20 | 461 | 4.42e-55 | 191 |
| Msa0843790 | AT1G70100.1 | 37.755 | 490 | 203 | 24 | 6 | 441 | 20 | 461 | 4.42e-55 | 191 |
| Msa0843790 | AT1G70100.2 | 37.755 | 490 | 203 | 24 | 6 | 441 | 20 | 461 | 4.42e-55 | 191 |
| Msa0843790 | AT1G24160.1 | 47.549 | 204 | 86 | 8 | 6 | 209 | 30 | 212 | 3.49e-38 | 147 |
| Msa0843790 | AT1G24160.2 | 47.549 | 204 | 86 | 8 | 6 | 209 | 30 | 212 | 3.49e-38 | 147 |
| Msa0843790 | AT3G26050.1 | 52.564 | 78 | 37 | 0 | 8 | 85 | 28 | 105 | 1.41e-19 | 92.0 |
| Msa0843790 | AT3G27350.1 | 64.516 | 62 | 21 | 1 | 10 | 70 | 30 | 91 | 2.42e-18 | 85.5 |
| Msa0843790 | AT3G27350.2 | 64.516 | 62 | 21 | 1 | 10 | 70 | 30 | 91 | 7.57e-18 | 85.1 |
| Msa0843790 | AT1G70950.1 | 60.656 | 61 | 24 | 0 | 8 | 68 | 16 | 76 | 2.94e-17 | 84.7 |
| Msa0843790 | AT5G40700.3 | 66.038 | 53 | 18 | 0 | 10 | 62 | 30 | 82 | 7.72e-17 | 80.9 |
| Msa0843790 | AT5G40700.1 | 66.038 | 53 | 18 | 0 | 10 | 62 | 30 | 82 | 1.46e-16 | 80.9 |
| Msa0843790 | AT5G40700.2 | 66.038 | 53 | 18 | 0 | 10 | 62 | 30 | 82 | 1.48e-16 | 80.9 |
| Msa0843790 | AT1G23060.1 | 62.295 | 61 | 23 | 0 | 8 | 68 | 16 | 76 | 3.40e-16 | 80.5 |
| Msa0843790 | AT1G23060.4 | 62.295 | 61 | 23 | 0 | 8 | 68 | 16 | 76 | 3.40e-16 | 80.5 |
| Msa0843790 | AT3G01710.4 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 1.88e-14 | 74.7 |
| Msa0843790 | AT3G01710.1 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 2.23e-14 | 75.5 |
| Msa0843790 | AT3G01710.2 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 2.23e-14 | 75.1 |
| Msa0843790 | AT3G01710.3 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 2.81e-14 | 75.1 |
| Msa0843790 | AT3G27350.3 | 67.347 | 49 | 15 | 1 | 23 | 70 | 3 | 51 | 3.57e-13 | 70.5 |
Find 131 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATGTCTTTCCAACAATTT+TGG | 0.117947 | 5_4:+21666422 | Msa0843790:five_prime_UTR |
| ACTTCTTCCAAATACTTATT+TGG | 0.140230 | 5_4:-21666966 | None:intergenic |
| CACTGGTTTCTTCTTTGTTT+TGG | 0.160966 | 5_4:-21667690 | None:intergenic |
| ATTCTCTCCAAATAAGTATT+TGG | 0.192425 | 5_4:+21666959 | Msa0843790:CDS |
| ATCTGCCGCTTCAACTAAAA+AGG | 0.192462 | 5_4:+21667790 | Msa0843790:CDS |
| ATCTCTCATTATGGATAGTA+TGG | 0.195712 | 5_4:+21667967 | Msa0843790:CDS |
| ACAACTTTGCGGAAAGAAAA+TGG | 0.230318 | 5_4:+21668264 | Msa0843790:CDS |
| CAATCTTGTTCTAGTTAAAT+AGG | 0.230992 | 5_4:+21671575 | Msa0843790:three_prime_UTR |
| AAGCAAACCTTAGATTTCTT+TGG | 0.233076 | 5_4:-21667551 | None:intergenic |
| GAGCCAACAATTCGGCTTTC+CGG | 0.260429 | 5_4:-21667064 | None:intergenic |
| GGAGGAGGAAGTTGCGGTTT+TGG | 0.263005 | 5_4:+21667310 | Msa0843790:CDS |
| AGCCAACAATTCGGCTTTCC+GGG | 0.287622 | 5_4:-21667063 | None:intergenic |
| TTGGCTGGTTAAAATTCTTC+TGG | 0.301994 | 5_4:-21668027 | None:intergenic |
| ACTTCTTATCGTGGTCAAAA+AGG | 0.318891 | 5_4:+21669963 | Msa0843790:CDS |
| TATGAGGAAATCTCTCATTA+TGG | 0.319055 | 5_4:+21667958 | Msa0843790:CDS |
| CATCATCATTTGTCTCTTTG+TGG | 0.334602 | 5_4:-21666165 | None:intergenic |
| GACCACGATAAGAAGTTGTT+AGG | 0.334966 | 5_4:-21669956 | None:intergenic |
| GATAGGTTATCCCTGTGAAT+AGG | 0.335244 | 5_4:+21667654 | Msa0843790:intron |
| ATCAGCCCGGTTGGTGATAT+CGG | 0.358999 | 5_4:+21667260 | Msa0843790:CDS |
| TTCTTCTGTGCTACTGATCC+AGG | 0.363303 | 5_4:-21667005 | None:intergenic |
| GGATCATCCAAAGAAATCTA+AGG | 0.365888 | 5_4:+21667544 | Msa0843790:CDS |
| TTCCGCAAAGTTGTAGAAGT+TGG | 0.385654 | 5_4:-21668255 | None:intergenic |
| TTCAGATCAGAAGAAAATAA+TGG | 0.389148 | 5_4:+21667119 | Msa0843790:CDS |
| TTTAGTTTAGTATGCAATAG+TGG | 0.406587 | 5_4:+21671542 | Msa0843790:three_prime_UTR |
| CTAGAAGTAACTTGCCTCCT+AGG | 0.410045 | 5_4:-21667830 | None:intergenic |
| AAGCTACAACCCAAAATTGT+TGG | 0.410245 | 5_4:-21666432 | None:intergenic |
| GGAACTGGATCAGGCTTACT+TGG | 0.415359 | 5_4:-21667908 | None:intergenic |
| ATGATGATGTTACTGTAGTA+AGG | 0.415437 | 5_4:+21666179 | Msa0843790:five_prime_UTR |
| TTCTTGCTTATCGCGTTCCT+CGG | 0.421641 | 5_4:-21667231 | None:intergenic |
| TTGTGAATTTCTTCAAGATA+AGG | 0.433130 | 5_4:+21666454 | Msa0843790:five_prime_UTR |
| ATAGGTTATCCCTGTGAATA+GGG | 0.434793 | 5_4:+21667655 | Msa0843790:intron |
| TTCCTCATAGTACGAGGAAC+TGG | 0.439423 | 5_4:-21667944 | None:intergenic |
| TTCCAACTTCTACAACTTTG+CGG | 0.441167 | 5_4:+21668253 | Msa0843790:CDS |
| AAAGCTAAAGCATGATTTCA+AGG | 0.446740 | 5_4:+21669926 | Msa0843790:CDS |
| TCCATCCTCTCAGCGGTAGC+AGG | 0.446927 | 5_4:-21668831 | None:intergenic |
| CTCCTGCCGATATCACCAAC+CGG | 0.447622 | 5_4:-21667266 | None:intergenic |
| CTTCTCTTGAGCCAACAATT+CGG | 0.451413 | 5_4:-21667072 | None:intergenic |
| TTGCACATGTCTATGAGCTT+AGG | 0.451785 | 5_4:+21667884 | Msa0843790:CDS |
| AGAAGGAGATGGAGAGGGAG+AGG | 0.454029 | 5_4:+21667090 | Msa0843790:CDS |
| GATGTAGGCTTTGAACTTCT+CGG | 0.454715 | 5_4:-21667746 | None:intergenic |
| GGTTCAGTAGTATGAGGAAC+TGG | 0.457148 | 5_4:-21667923 | None:intergenic |
| GGCCCGGAAAGCCGAATTGT+TGG | 0.460858 | 5_4:+21667061 | Msa0843790:CDS |
| CATAGACATGTGCAAAGATC+TGG | 0.461378 | 5_4:-21667876 | None:intergenic |
| CCACCTCAACTGATGAACTT+TGG | 0.468288 | 5_4:-21667340 | None:intergenic |
| AAAATGATTAATCTTGATCA+TGG | 0.470551 | 5_4:+21666385 | Msa0843790:five_prime_UTR |
| CTCAAGAGAAGGAGATGGAG+AGG | 0.471982 | 5_4:+21667084 | Msa0843790:CDS |
| TTGTCTCTTTGTGGTACTTG+AGG | 0.482949 | 5_4:-21666156 | None:intergenic |
| ACCACGATAAGAAGTTGTTA+GGG | 0.483102 | 5_4:-21669955 | None:intergenic |
| GAGAATAAAGAGGTGGAAAG+TGG | 0.486653 | 5_4:+21667362 | Msa0843790:CDS |
| GAGTCATGCGGATGATTTGA+AGG | 0.487910 | 5_4:+21667286 | Msa0843790:CDS |
| TGGAAGTGTTGTACAAACTT+TGG | 0.489754 | 5_4:+21668863 | Msa0843790:CDS |
| GTCGAAATTTGAGATGCCTT+AGG | 0.493805 | 5_4:-21667722 | None:intergenic |
| GCCCGGTTGGTGATATCGGC+AGG | 0.496567 | 5_4:+21667264 | Msa0843790:CDS |
| TTGATAATGATTCACTGTCA+TGG | 0.498358 | 5_4:+21666922 | Msa0843790:CDS |
| GCCTGCTACCGCTGAGAGGA+TGG | 0.498899 | 5_4:+21668830 | Msa0843790:CDS |
| TGAAGATCTGTCTTCTTCTA+CGG | 0.498983 | 5_4:-21668056 | None:intergenic |
| GAAGGAGGAGGAGGAAGTTG+CGG | 0.503678 | 5_4:+21667304 | Msa0843790:CDS |
| TGATAATGATTCACTGTCAT+GGG | 0.504101 | 5_4:+21666923 | Msa0843790:CDS |
| AATGATTATGAGTAAAGTAA+AGG | 0.506528 | 5_4:-21666275 | None:intergenic |
| GTAGTATGAGGAACTGGATC+AGG | 0.506674 | 5_4:-21667917 | None:intergenic |
| AGTGACATTAAATCAGAGAA+AGG | 0.512134 | 5_4:+21668894 | Msa0843790:CDS |
| GGTATAGATCTGAGCGGTAA+TGG | 0.512864 | 5_4:+21667140 | Msa0843790:CDS |
| ATCAGCTCCAACTAAAACAT+TGG | 0.513745 | 5_4:+21667766 | Msa0843790:CDS |
| TTATGAACATTCTGAGGAGT+AGG | 0.514661 | 5_4:+21671606 | Msa0843790:three_prime_UTR |
| GCGTCTCCAAACAAAATTGA+AGG | 0.515742 | 5_4:+21669068 | Msa0843790:CDS |
| GTGACATTAAATCAGAGAAA+GGG | 0.517883 | 5_4:+21668895 | Msa0843790:CDS |
| GAAGGAGATGGAGAGGGAGA+GGG | 0.518011 | 5_4:+21667091 | Msa0843790:CDS |
| GGATGATTTGAAGGAGGAGG+AGG | 0.520239 | 5_4:+21667295 | Msa0843790:CDS |
| TAACGCCTGTGAGACTGATT+CGG | 0.522705 | 5_4:+21667175 | Msa0843790:CDS |
| CAGATCTTCAGTAATAAAGC+AGG | 0.527908 | 5_4:+21668069 | Msa0843790:CDS |
| GTTGAGAAGTGTGCTACACC+TGG | 0.537623 | 5_4:+21666987 | Msa0843790:CDS |
| TCTCTCATTATGGATAGTAT+GGG | 0.541545 | 5_4:+21667968 | Msa0843790:CDS |
| CCAAAGTTCATCAGTTGAGG+TGG | 0.544431 | 5_4:+21667340 | Msa0843790:CDS |
| AGTAACTTGCCTCCTAGGTA+AGG | 0.548527 | 5_4:-21667825 | None:intergenic |
| ATCCTGACAGGCTCCTCCAA+GGG | 0.550707 | 5_4:+21668215 | Msa0843790:intron |
| CTCTCATTATGGATAGTATG+GGG | 0.551989 | 5_4:+21667969 | Msa0843790:CDS |
| TGCGGATGATTTGAAGGAGG+AGG | 0.552581 | 5_4:+21667292 | Msa0843790:CDS |
| TTCTGTATTTCCAACACTCA+AGG | 0.555022 | 5_4:+21667200 | Msa0843790:CDS |
| GAAATTGAAATCAGCCCGGT+TGG | 0.555960 | 5_4:+21667251 | Msa0843790:CDS |
| CGAATTGTTGGCTCAAGAGA+AGG | 0.556667 | 5_4:+21667073 | Msa0843790:CDS |
| AACCAGTTCCTCGTACTATG+AGG | 0.558590 | 5_4:+21667942 | Msa0843790:CDS |
| TCTAGTTCAAACGTCATGGA+AGG | 0.560279 | 5_4:-21671684 | None:intergenic |
| TGATGATGTTACTGTAGTAA+GGG | 0.569285 | 5_4:+21666180 | Msa0843790:five_prime_UTR |
| GAATTCCGAATCAGTCTCAC+AGG | 0.570594 | 5_4:-21667180 | None:intergenic |
| ATTCACTGTCATGGGAGAGA+TGG | 0.571273 | 5_4:+21666931 | Msa0843790:CDS |
| TTACCAAAGTTCATCAGTTG+AGG | 0.572684 | 5_4:+21667337 | Msa0843790:CDS |
| GGAACTGGTTCAGTAGTATG+AGG | 0.573216 | 5_4:-21667929 | None:intergenic |
| ATAAGAAGTTGTTAGGGGTG+TGG | 0.577233 | 5_4:-21669949 | None:intergenic |
| TATCCTGACAGGCTCCTCCA+AGG | 0.579565 | 5_4:+21668214 | Msa0843790:intron |
| GCCGTCGATAGCTGCACAAG+TGG | 0.580175 | 5_4:+21671422 | Msa0843790:exon |
| ACCAGTGGCAGCAAAACCTA+AGG | 0.581842 | 5_4:+21667706 | Msa0843790:CDS |
| TGTGTACAAAGAGACAGAAA+AGG | 0.583777 | 5_4:+21667490 | Msa0843790:CDS |
| GATAGCTGCACAAGTGGTGA+AGG | 0.584660 | 5_4:+21671428 | Msa0843790:exon |
| TGAACATTCTGAGGAGTAGG+AGG | 0.587057 | 5_4:+21671609 | Msa0843790:three_prime_UTR |
| GAGAGGATGGAGAAAAGAAG+TGG | 0.591130 | 5_4:+21668843 | Msa0843790:CDS |
| GTCTCATAGTATGTGTTCAA+AGG | 0.592643 | 5_4:+21671493 | Msa0843790:three_prime_UTR |
| TGAGGTGGAGAATAAAGAGG+TGG | 0.606003 | 5_4:+21667355 | Msa0843790:CDS |
| ACCACTTGTGCAGCTATCGA+CGG | 0.610344 | 5_4:-21671423 | None:intergenic |
| TCTTAATTATGAACATTCTG+AGG | 0.611268 | 5_4:+21671600 | Msa0843790:three_prime_UTR |
| GATCTGAGCGGTAATGGTAA+CGG | 0.615279 | 5_4:+21667146 | Msa0843790:CDS |
| GTTGGCTCAAGAGAAGGAGA+TGG | 0.615563 | 5_4:+21667079 | Msa0843790:CDS |
| CTTTGCGGAAAGAAAATGGA+AGG | 0.615877 | 5_4:+21668268 | Msa0843790:CDS |
| GGTACAACTACCTTGAGTGT+TGG | 0.618926 | 5_4:-21667210 | None:intergenic |
| GAGGCAAGTTACTTCTAGTG+TGG | 0.620877 | 5_4:+21667835 | Msa0843790:CDS |
| TCAAGAGAAGGAGATGGAGA+GGG | 0.629762 | 5_4:+21667085 | Msa0843790:CDS |
| CGTTGAAGCTGAAGATGTGA+AGG | 0.632249 | 5_4:+21667454 | Msa0843790:CDS |
| AGTTGAGGTGGAGAATAAAG+AGG | 0.632776 | 5_4:+21667352 | Msa0843790:CDS |
| TAAATCAGAGAAAGGGAAAG+CGG | 0.634535 | 5_4:+21668902 | Msa0843790:CDS |
| GCAAGAAATTGAAATCAGCC+CGG | 0.634918 | 5_4:+21667247 | Msa0843790:CDS |
| ATTACAAGAAGATTGCGGCC+CGG | 0.636848 | 5_4:+21667045 | Msa0843790:CDS |
| TCCTGACAGGCTCCTCCAAG+GGG | 0.640441 | 5_4:+21668216 | Msa0843790:intron |
| TCCTGCCGATATCACCAACC+GGG | 0.642989 | 5_4:-21667265 | None:intergenic |
| CAAAACAAAGAAGAAACCAG+TGG | 0.646612 | 5_4:+21667691 | Msa0843790:CDS |
| GAAATCCGCAGTCCTTACCT+AGG | 0.647614 | 5_4:+21667813 | Msa0843790:CDS |
| CCCCTAACAACTTCTTATCG+TGG | 0.648364 | 5_4:+21669954 | Msa0843790:CDS |
| ATCCGCAGTCCTTACCTAGG+AGG | 0.650233 | 5_4:+21667816 | Msa0843790:CDS |
| CAAGTGGTGAAGGTAAAGAG+AGG | 0.661353 | 5_4:+21671438 | Msa0843790:three_prime_UTR |
| AGCTCATTACAAGAAGATTG+CGG | 0.664583 | 5_4:+21667040 | Msa0843790:CDS |
| CCACGATAAGAAGTTGTTAG+GGG | 0.668169 | 5_4:-21669954 | None:intergenic |
| ATAGGCCTGCTACCGCTGAG+AGG | 0.670892 | 5_4:+21668826 | Msa0843790:intron |
| GAGGTGGAAAGTGGATCACA+TGG | 0.674354 | 5_4:+21667371 | Msa0843790:CDS |
| TGATATCGGCAGGAGTCATG+CGG | 0.677640 | 5_4:+21667274 | Msa0843790:CDS |
| TCTCATTATGGATAGTATGG+GGG | 0.688469 | 5_4:+21667970 | Msa0843790:CDS |
| TGAATAGAAGTCAAACACAC+CGG | 0.691837 | 5_4:+21671467 | Msa0843790:three_prime_UTR |
| CACTCAAGGTAGTTGTACCG+AGG | 0.698782 | 5_4:+21667214 | Msa0843790:CDS |
| TCATGCGGATGATTTGAAGG+AGG | 0.701389 | 5_4:+21667289 | Msa0843790:CDS |
| ACACATACTATGAGACACAC+CGG | 0.709641 | 5_4:-21671486 | None:intergenic |
| AGAGATTTCCTCATAGTACG+AGG | 0.729557 | 5_4:-21667950 | None:intergenic |
| TGCCTCCTAGGTAAGGACTG+CGG | 0.746167 | 5_4:-21667818 | None:intergenic |
| CCTGACAGGCTCCTCCAAGG+GGG | 0.748791 | 5_4:+21668217 | Msa0843790:intron |
| AATAATGGTATAGATCTGAG+CGG | 0.762921 | 5_4:+21667134 | Msa0843790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATAATGTTAAATTTTTTAA+AGG | + | chr5_4:21667604-21667623 | Msa0843790:intron | 10.0% |
| !!! | AATTAATTTTTTTTGTGAAT+AGG | + | chr5_4:21668808-21668827 | Msa0843790:intron | 10.0% |
| !!! | AATATATTTTTGTAATGTTT+CGG | + | chr5_4:21669369-21669388 | Msa0843790:intron | 10.0% |
| !! | TCAAAAAAAAAAAAATTTGA+GGG | - | chr5_4:21670642-21670661 | None:intergenic | 10.0% |
| !!! | ACAAATAAAATATTTCTTTT+CGG | + | chr5_4:21670944-21670963 | Msa0843790:intron | 10.0% |
| !! | AAACAACAAAAATAAGAAAT+GGG | - | chr5_4:21666484-21666503 | None:intergenic | 15.0% |
| !! | AAAACAACAAAAATAAGAAA+TGG | - | chr5_4:21666485-21666504 | None:intergenic | 15.0% |
| !!! | GTAAAAATGTTGTTTTTTTT+TGG | + | chr5_4:21666676-21666695 | Msa0843790:intron | 15.0% |
| !!! | ATACCAAAAAGTTATTTTTA+AGG | - | chr5_4:21670103-21670122 | None:intergenic | 15.0% |
| !! | TTCTTAGAAAATTATTTAGA+TGG | - | chr5_4:21670605-21670624 | None:intergenic | 15.0% |
| !! | CTCAAAAAAAAAAAAATTTG+AGG | - | chr5_4:21670643-21670662 | None:intergenic | 15.0% |
| !!! | CTCAAATTTTTTTTTTTTTG+AGG | + | chr5_4:21670641-21670660 | Msa0843790:intron | 15.0% |
| !! | AAATCATGTTTGATATATAT+TGG | + | chr5_4:21670974-21670993 | Msa0843790:intron | 15.0% |
| !! | AAGATATTGTTAAAATATGA+GGG | - | chr5_4:21671008-21671027 | None:intergenic | 15.0% |
| !! | TAAGATATTGTTAAAATATG+AGG | - | chr5_4:21671009-21671028 | None:intergenic | 15.0% |
| !! | TTTACATAATGAACATTATT+TGG | - | chr5_4:21671102-21671121 | None:intergenic | 15.0% |
| !! | AATGATTATGAGTAAAGTAA+AGG | - | chr5_4:21666278-21666297 | None:intergenic | 20.0% |
| !! | AAAATGATTAATCTTGATCA+TGG | + | chr5_4:21666385-21666404 | Msa0843790:five_prime_UTR | 20.0% |
| !!! | CAAACATTTTAATAAACACA+TGG | - | chr5_4:21666649-21666668 | None:intergenic | 20.0% |
| !!! | ATTGTTGTTTGATTCTAAAA+AGG | + | chr5_4:21666703-21666722 | Msa0843790:intron | 20.0% |
| !!! | TATTTGATTACCGTTTATTT+TGG | + | chr5_4:21667632-21667651 | Msa0843790:intron | 20.0% |
| !! | CAATTTATATATAGATTCCT+TGG | - | chr5_4:21668462-21668481 | None:intergenic | 20.0% |
| !!! | TCTATTTTGATGAAATTGTA+TGG | + | chr5_4:21668785-21668804 | Msa0843790:intron | 20.0% |
| !! | GATGAAAGAAAAAAATAGTT+TGG | - | chr5_4:21668990-21669009 | None:intergenic | 20.0% |
| !!! | GTCATTTTAATAGAAAATCA+CGG | - | chr5_4:21669108-21669127 | None:intergenic | 20.0% |
| !!! | TGATTTTCTATTAAAATGAC+TGG | + | chr5_4:21669108-21669127 | Msa0843790:intron | 20.0% |
| !!! | GATTTTTTTTAAAATCGACT+TGG | + | chr5_4:21669285-21669304 | Msa0843790:intron | 20.0% |
| !!! | TAATGTTTCGGTTTAATTTA+GGG | + | chr5_4:21669381-21669400 | Msa0843790:intron | 20.0% |
| !!! | TAAGTGTCATTCAATAATAA+CGG | + | chr5_4:21669450-21669469 | Msa0843790:intron | 20.0% |
| !!! | TTTCTAGCTTTATAAATTCA+TGG | - | chr5_4:21669570-21669589 | None:intergenic | 20.0% |
| !! | CTATAAACTAAATACATGAT+TGG | - | chr5_4:21669806-21669825 | None:intergenic | 20.0% |
| !!! | TCATGTATTTAGTTTATAGA+AGG | + | chr5_4:21669807-21669826 | Msa0843790:intron | 20.0% |
| !!! | CATGTATTTAGTTTATAGAA+GGG | + | chr5_4:21669808-21669827 | Msa0843790:intron | 20.0% |
| !!! | CAACCTTAAAAATAACTTTT+TGG | + | chr5_4:21670097-21670116 | Msa0843790:intron | 20.0% |
| !!! | TTTCATCATTATTTCTAGTA+TGG | - | chr5_4:21670342-21670361 | None:intergenic | 20.0% |
| !!! | GAAAATTTTACCACTTTTTA+GGG | - | chr5_4:21670407-21670426 | None:intergenic | 20.0% |
| !!! | TGAAAATTTTACCACTTTTT+AGG | - | chr5_4:21670408-21670427 | None:intergenic | 20.0% |
| !! | TTCAGAATAGACATAAAAAT+GGG | - | chr5_4:21670486-21670505 | None:intergenic | 20.0% |
| !! | ATTCAGAATAGACATAAAAA+TGG | - | chr5_4:21670487-21670506 | None:intergenic | 20.0% |
| !!! | GACTTTTACTTAATAATAGA+GGG | - | chr5_4:21670679-21670698 | None:intergenic | 20.0% |
| !! | TAGATGCAACATTATTAATA+TGG | - | chr5_4:21671055-21671074 | None:intergenic | 20.0% |
| !! | TTAATAATGTTGCATCTAAA+AGG | + | chr5_4:21671057-21671076 | Msa0843790:intron | 20.0% |
| !! | TAATAATGTTGCATCTAAAA+GGG | + | chr5_4:21671058-21671077 | Msa0843790:intron | 20.0% |
| !!! | TGAGTTTGTAAATTTGATTT+TGG | - | chr5_4:21671204-21671223 | None:intergenic | 20.0% |
| !!! | TTTGCATATAAGTTGAATTT+AGG | - | chr5_4:21671249-21671268 | None:intergenic | 20.0% |
| ! | ATATAAAAAACATGTGCATG+TGG | - | chr5_4:21666248-21666267 | None:intergenic | 25.0% |
| !! | TATGTCTTTCCAACAATTTT+GGG | + | chr5_4:21666423-21666442 | Msa0843790:five_prime_UTR | 25.0% |
| ! | TTGTGAATTTCTTCAAGATA+AGG | + | chr5_4:21666454-21666473 | Msa0843790:five_prime_UTR | 25.0% |
| !!! | TGTAAATCTGTTTTGTTCTT+AGG | + | chr5_4:21666540-21666559 | Msa0843790:intron | 25.0% |
| !!! | ATTGTTGTTGTTTGATTAGA+TGG | + | chr5_4:21666745-21666764 | Msa0843790:intron | 25.0% |
| !!! | TTGTTGTTGTTTGATTAGAT+GGG | + | chr5_4:21666746-21666765 | Msa0843790:intron | 25.0% |
| !!! | NNNNNNGTGTCTGTTTCTTT+TGG | + | chr5_4:21666894-21666913 | Msa0843790:intron | 25.0% |
| ! | ATTCTCTCCAAATAAGTATT+TGG | + | chr5_4:21666959-21666978 | Msa0843790:CDS | 25.0% |
| ! | ACTTCTTCCAAATACTTATT+TGG | - | chr5_4:21666969-21666988 | None:intergenic | 25.0% |
| ! | TTCAGATCAGAAGAAAATAA+TGG | + | chr5_4:21667119-21667138 | Msa0843790:CDS | 25.0% |
| ! | TGAAGAAAAAGATGTGAAAT+TGG | + | chr5_4:21667523-21667542 | Msa0843790:CDS | 25.0% |
| !!! | GGTTTGCTTTATTTCATATT+TGG | + | chr5_4:21667565-21667584 | Msa0843790:intron | 25.0% |
| ! | GATAACCTATCCAAAATAAA+CGG | - | chr5_4:21667645-21667664 | None:intergenic | 25.0% |
| !!! | TTTTTTACATATATCCTGAC+AGG | + | chr5_4:21668203-21668222 | Msa0843790:intron | 25.0% |
| ! | TGGAAGGTAAATTATTGAAT+TGG | + | chr5_4:21668284-21668303 | Msa0843790:intron | 25.0% |
| !!! | TGGCACTTTTATTGTTTTAT+AGG | + | chr5_4:21668304-21668323 | Msa0843790:intron | 25.0% |
| !!! | AAGAAGGTTTTTTAATCGTA+TGG | + | chr5_4:21668394-21668413 | Msa0843790:intron | 25.0% |
| ! | GTACAATACATTTCATCTAA+AGG | - | chr5_4:21668563-21668582 | None:intergenic | 25.0% |
| ! | AATGTATTGTACTTCGTAAA+CGG | + | chr5_4:21668571-21668590 | Msa0843790:intron | 25.0% |
| ! | CAATTCAATACTTAACACAA+TGG | - | chr5_4:21668609-21668628 | None:intergenic | 25.0% |
| !!! | TCTGATTTAATGTCACTTTT+CGG | - | chr5_4:21668891-21668910 | None:intergenic | 25.0% |
| !! | CTTTCAATTTTAAACATCAC+AGG | - | chr5_4:21668939-21668958 | None:intergenic | 25.0% |
| ! | AGAAGAAAACTACAAATAAG+GGG | - | chr5_4:21668965-21668984 | None:intergenic | 25.0% |
| ! | CAGAAGAAAACTACAAATAA+GGG | - | chr5_4:21668966-21668985 | None:intergenic | 25.0% |
| ! | TCAGAAGAAAACTACAAATA+AGG | - | chr5_4:21668967-21668986 | None:intergenic | 25.0% |
| !!! | TTTTTCCTCTATTTTTCTTG+AGG | - | chr5_4:21669022-21669041 | None:intergenic | 25.0% |
| !!! | GAGATGATATTTTGAAAGAT+AGG | + | chr5_4:21669191-21669210 | Msa0843790:intron | 25.0% |
| ! | TCAATGATACTTATTGTGTT+TGG | + | chr5_4:21669226-21669245 | Msa0843790:intron | 25.0% |
| ! | CAATGATACTTATTGTGTTT+GGG | + | chr5_4:21669227-21669246 | Msa0843790:intron | 25.0% |
| ! | AATGATACTTATTGTGTTTG+GGG | + | chr5_4:21669228-21669247 | Msa0843790:intron | 25.0% |
| !! | GTAATGTTTCGGTTTAATTT+AGG | + | chr5_4:21669380-21669399 | Msa0843790:intron | 25.0% |
| ! | AATAGATTCTAATGTGAAGT+TGG | + | chr5_4:21669484-21669503 | Msa0843790:intron | 25.0% |
| ! | ATAGATTCTAATGTGAAGTT+GGG | + | chr5_4:21669485-21669504 | Msa0843790:intron | 25.0% |
| !! | TTTATAGCTTTTGCTTAACA+TGG | + | chr5_4:21669509-21669528 | Msa0843790:intron | 25.0% |
| ! | GAATTTATAAAGCTAGAAAC+TGG | + | chr5_4:21669571-21669590 | Msa0843790:intron | 25.0% |
| !!! | AAACTACTTTTCATCACTTT+TGG | + | chr5_4:21669667-21669686 | Msa0843790:intron | 25.0% |
| ! | TTCTATATTCACATCTGAAA+TGG | + | chr5_4:21670043-21670062 | Msa0843790:intron | 25.0% |
| ! | ATTATCAGTTGTTAAACACA+AGG | - | chr5_4:21670210-21670229 | None:intergenic | 25.0% |
| ! | TGTGTTTAACAACTGATAAT+TGG | + | chr5_4:21670210-21670229 | Msa0843790:intron | 25.0% |
| ! | TACAGTTAAACAAGAATTGT+AGG | + | chr5_4:21670372-21670391 | Msa0843790:intron | 25.0% |
| ! | GATTATTATACCCTAAAAAG+TGG | + | chr5_4:21670394-21670413 | Msa0843790:intron | 25.0% |
| !! | TGGTAAAATTTTCATATGAG+AGG | + | chr5_4:21670414-21670433 | Msa0843790:intron | 25.0% |
| !! | GGTAAAATTTTCATATGAGA+GGG | + | chr5_4:21670415-21670434 | Msa0843790:intron | 25.0% |
| !! | CGACTTTTACTTAATAATAG+AGG | - | chr5_4:21670680-21670699 | None:intergenic | 25.0% |
| ! | ATTATTAAGTAAAAGTCGCA+TGG | + | chr5_4:21670682-21670701 | Msa0843790:intron | 25.0% |
| ! | TTATTAAGTAAAAGTCGCAT+GGG | + | chr5_4:21670683-21670702 | Msa0843790:intron | 25.0% |
| !!! | GGTCTTATTAATTAAGGATT+GGG | + | chr5_4:21670704-21670723 | Msa0843790:intron | 25.0% |
| !!! | GAACTTGTTTTTTATTTCGT+CGG | - | chr5_4:21670731-21670750 | None:intergenic | 25.0% |
| ! | ATTATTGAGTGAAATTCATG+TGG | - | chr5_4:21670753-21670772 | None:intergenic | 25.0% |
| ! | ACATTATGATAACAAGATCA+TGG | - | chr5_4:21670922-21670941 | None:intergenic | 25.0% |
| !! | AAAATATTTCTTTTCGGCAA+AGG | + | chr5_4:21670950-21670969 | Msa0843790:intron | 25.0% |
| !!! | ATTTGATTTTGGTTGAACTT+TGG | - | chr5_4:21671193-21671212 | None:intergenic | 25.0% |
| ! | TCAACTTATATGCAAAATCT+AGG | + | chr5_4:21671253-21671272 | Msa0843790:intron | 25.0% |
| !! | TTTAGTTTAGTATGCAATAG+TGG | + | chr5_4:21671542-21671561 | Msa0843790:three_prime_UTR | 25.0% |
| !! | CAATCTTGTTCTAGTTAAAT+AGG | + | chr5_4:21671575-21671594 | Msa0843790:three_prime_UTR | 25.0% |
| ! | TCTTAATTATGAACATTCTG+AGG | + | chr5_4:21671600-21671619 | Msa0843790:three_prime_UTR | 25.0% |
| ! | ATGATGATGTTACTGTAGTA+AGG | + | chr5_4:21666179-21666198 | Msa0843790:five_prime_UTR | 30.0% |
| ! | TGATGATGTTACTGTAGTAA+GGG | + | chr5_4:21666180-21666199 | Msa0843790:five_prime_UTR | 30.0% |
| TGTAGTAAGGGAAAAAAAGA+AGG | + | chr5_4:21666192-21666211 | Msa0843790:five_prime_UTR | 30.0% | |
| GTAGTAAGGGAAAAAAAGAA+GGG | + | chr5_4:21666193-21666212 | Msa0843790:five_prime_UTR | 30.0% | |
| ! | CTATGTCTTTCCAACAATTT+TGG | + | chr5_4:21666422-21666441 | Msa0843790:five_prime_UTR | 30.0% |
| !! | AATCTGTTTTGTTCTTAGGT+TGG | + | chr5_4:21666544-21666563 | Msa0843790:intron | 30.0% |
| !! | TTGATAATGATTCACTGTCA+TGG | + | chr5_4:21666922-21666941 | Msa0843790:CDS | 30.0% |
| ! | TGATAATGATTCACTGTCAT+GGG | + | chr5_4:21666923-21666942 | Msa0843790:CDS | 30.0% |
| AATAATGGTATAGATCTGAG+CGG | + | chr5_4:21667134-21667153 | Msa0843790:CDS | 30.0% | |
| AAGCAAACCTTAGATTTCTT+TGG | - | chr5_4:21667554-21667573 | None:intergenic | 30.0% | |
| !!! | GATTACCGTTTATTTTGGAT+AGG | + | chr5_4:21667637-21667656 | Msa0843790:intron | 30.0% |
| ! | CATTATTTTCCCTATTCACA+GGG | - | chr5_4:21667667-21667686 | None:intergenic | 30.0% |
| !!! | ATTTCCCTTTTTAGTTGAAG+CGG | - | chr5_4:21667798-21667817 | None:intergenic | 30.0% |
| TATGAGGAAATCTCTCATTA+TGG | + | chr5_4:21667958-21667977 | Msa0843790:CDS | 30.0% | |
| ATCTCTCATTATGGATAGTA+TGG | + | chr5_4:21667967-21667986 | Msa0843790:CDS | 30.0% | |
| TCTCTCATTATGGATAGTAT+GGG | + | chr5_4:21667968-21667987 | Msa0843790:CDS | 30.0% | |
| TCAGTAATAAAGCAGGTAAT+TGG | + | chr5_4:21668076-21668095 | Msa0843790:intron | 30.0% | |
| ATAACTGCAGTTCATTGTTA+TGG | + | chr5_4:21668111-21668130 | Msa0843790:intron | 30.0% | |
| GTTATGGATGGTGATAAATT+TGG | + | chr5_4:21668127-21668146 | Msa0843790:intron | 30.0% | |
| TCTTAACAACACATTGAAGA+AGG | + | chr5_4:21668378-21668397 | Msa0843790:intron | 30.0% | |
| !!! | TTTTGTTTCTAGCTTCCTTT+TGG | + | chr5_4:21668426-21668445 | Msa0843790:intron | 30.0% |
| TCTTATCATATGCTTTGTCA+AGG | - | chr5_4:21668740-21668759 | None:intergenic | 30.0% | |
| !!! | TGATTTAATGTCACTTTTCG+GGG | - | chr5_4:21668889-21668908 | None:intergenic | 30.0% |
| !!! | CTGATTTAATGTCACTTTTC+GGG | - | chr5_4:21668890-21668909 | None:intergenic | 30.0% |
| AGTGACATTAAATCAGAGAA+AGG | + | chr5_4:21668894-21668913 | Msa0843790:CDS | 30.0% | |
| GTGACATTAAATCAGAGAAA+GGG | + | chr5_4:21668895-21668914 | Msa0843790:CDS | 30.0% | |
| GAAGAAAACTACAAATAAGG+GGG | - | chr5_4:21668964-21668983 | None:intergenic | 30.0% | |
| GGAAAAACCTAATACAAAAG+TGG | + | chr5_4:21669035-21669054 | Msa0843790:CDS | 30.0% | |
| !! | CTTTCTACCACTTTTGTATT+AGG | - | chr5_4:21669045-21669064 | None:intergenic | 30.0% |
| !! | AGAGTACCTTCAATTTTGTT+TGG | - | chr5_4:21669077-21669096 | None:intergenic | 30.0% |
| TAATAGAAAATCACGGAATG+AGG | - | chr5_4:21669101-21669120 | None:intergenic | 30.0% | |
| !! | TGATATTTTGAAAGATAGGC+AGG | + | chr5_4:21669195-21669214 | Msa0843790:intron | 30.0% |
| !! | GATATTTTGAAAGATAGGCA+GGG | + | chr5_4:21669196-21669215 | Msa0843790:intron | 30.0% |
| ATGATACTTATTGTGTTTGG+GGG | + | chr5_4:21669229-21669248 | Msa0843790:intron | 30.0% | |
| ! | ACTTGGTTAAAACTGTGTTT+TGG | + | chr5_4:21669302-21669321 | Msa0843790:intron | 30.0% |
| TTTCGTAAAGAACGAATGTT+TGG | - | chr5_4:21669736-21669755 | None:intergenic | 30.0% | |
| AAAGCTAAAGCATGATTTCA+AGG | + | chr5_4:21669926-21669945 | Msa0843790:CDS | 30.0% | |
| ! | GGAAAGTTATATGTTGCTTA+AGG | + | chr5_4:21670064-21670083 | Msa0843790:intron | 30.0% |
| AACAACTGATAATTGGAGTT+TGG | + | chr5_4:21670217-21670236 | Msa0843790:intron | 30.0% | |
| ! | TTGGTGATAGTAATCAAGTT+AGG | + | chr5_4:21670236-21670255 | Msa0843790:intron | 30.0% |
| TGGTGATAGTAATCAAGTTA+GGG | + | chr5_4:21670237-21670256 | Msa0843790:intron | 30.0% | |
| ! | TATCTCTCAGTATTCAAGTT+TGG | + | chr5_4:21670446-21670465 | Msa0843790:intron | 30.0% |
| GAATAGACATAAAAATGGGA+GGG | - | chr5_4:21670482-21670501 | None:intergenic | 30.0% | |
| AGAATAGACATAAAAATGGG+AGG | - | chr5_4:21670483-21670502 | None:intergenic | 30.0% | |
| !! | GGGTCTTATTAATTAAGGAT+TGG | + | chr5_4:21670703-21670722 | Msa0843790:intron | 30.0% |
| ! | TATGCTTTTAGTGATAGTCT+AGG | - | chr5_4:21670829-21670848 | None:intergenic | 30.0% |
| ! | TAGACTATCACTAAAAGCAT+AGG | + | chr5_4:21670828-21670847 | Msa0843790:intron | 30.0% |
| ! | CTAAAAGCATAGGTTGAATA+TGG | + | chr5_4:21670838-21670857 | Msa0843790:intron | 30.0% |
| ! | TGAATATGGTTTGGAATATG+TGG | + | chr5_4:21670852-21670871 | Msa0843790:intron | 30.0% |
| ! | TAAGTTGAATTTAGGAAACC+TGG | - | chr5_4:21671241-21671260 | None:intergenic | 30.0% |
| TTCATTGTCCTTACACTTAA+TGG | + | chr5_4:21671292-21671311 | Msa0843790:intron | 30.0% | |
| !!! | ATTTTCTAGTTCAAACGTCA+TGG | - | chr5_4:21671691-21671710 | None:intergenic | 30.0% |
| CATCATCATTTGTCTCTTTG+TGG | - | chr5_4:21666168-21666187 | None:intergenic | 35.0% | |
| AAGCTACAACCCAAAATTGT+TGG | - | chr5_4:21666435-21666454 | None:intergenic | 35.0% | |
| AGCTCATTACAAGAAGATTG+CGG | + | chr5_4:21667040-21667059 | Msa0843790:CDS | 35.0% | |
| TTCTGTATTTCCAACACTCA+AGG | + | chr5_4:21667200-21667219 | Msa0843790:CDS | 35.0% | |
| TTACCAAAGTTCATCAGTTG+AGG | + | chr5_4:21667337-21667356 | Msa0843790:CDS | 35.0% | |
| ! | TTTATGCACACGTCTTTTTC+AGG | - | chr5_4:21667416-21667435 | None:intergenic | 35.0% |
| TGTGTACAAAGAGACAGAAA+AGG | + | chr5_4:21667490-21667509 | Msa0843790:CDS | 35.0% | |
| GGATCATCCAAAGAAATCTA+AGG | + | chr5_4:21667544-21667563 | Msa0843790:CDS | 35.0% | |
| ATAGGTTATCCCTGTGAATA+GGG | + | chr5_4:21667655-21667674 | Msa0843790:intron | 35.0% | |
| ! | GCATTATTTTCCCTATTCAC+AGG | - | chr5_4:21667668-21667687 | None:intergenic | 35.0% |
| !!! | CACTGGTTTCTTCTTTGTTT+TGG | - | chr5_4:21667693-21667712 | None:intergenic | 35.0% |
| CAAAACAAAGAAGAAACCAG+TGG | + | chr5_4:21667691-21667710 | Msa0843790:CDS | 35.0% | |
| ATCAGCTCCAACTAAAACAT+TGG | + | chr5_4:21667766-21667785 | Msa0843790:CDS | 35.0% | |
| CTCTCATTATGGATAGTATG+GGG | + | chr5_4:21667969-21667988 | Msa0843790:CDS | 35.0% | |
| TCTCATTATGGATAGTATGG+GGG | + | chr5_4:21667970-21667989 | Msa0843790:CDS | 35.0% | |
| ! | TTGGCTGGTTAAAATTCTTC+TGG | - | chr5_4:21668030-21668049 | None:intergenic | 35.0% |
| ! | TCTTCTTCTACGGAAGTTTT+TGG | - | chr5_4:21668049-21668068 | None:intergenic | 35.0% |
| TGAAGATCTGTCTTCTTCTA+CGG | - | chr5_4:21668059-21668078 | None:intergenic | 35.0% | |
| CAGATCTTCAGTAATAAAGC+AGG | + | chr5_4:21668069-21668088 | Msa0843790:CDS | 35.0% | |
| TTCCAACTTCTACAACTTTG+CGG | + | chr5_4:21668253-21668272 | Msa0843790:CDS | 35.0% | |
| ACAACTTTGCGGAAAGAAAA+TGG | + | chr5_4:21668264-21668283 | Msa0843790:CDS | 35.0% | |
| CAAGTCGCAAATGATATTGT+TGG | - | chr5_4:21668528-21668547 | None:intergenic | 35.0% | |
| ! | AATTGAATCTGCTTGCTAGT+TGG | + | chr5_4:21668687-21668706 | Msa0843790:intron | 35.0% |
| ATATGCTTTGTCAAGGAAAG+AGG | - | chr5_4:21668733-21668752 | None:intergenic | 35.0% | |
| !! | TGGAAGTGTTGTACAAACTT+TGG | + | chr5_4:21668863-21668882 | Msa0843790:CDS | 35.0% |
| TAAATCAGAGAAAGGGAAAG+CGG | + | chr5_4:21668902-21668921 | Msa0843790:CDS | 35.0% | |
| TCAGTCCTCAAGAAAAATAG+AGG | + | chr5_4:21669014-21669033 | Msa0843790:intron | 35.0% | |
| CATTTCCTATATTCCTGTGT+TGG | + | chr5_4:21669131-21669150 | Msa0843790:intron | 35.0% | |
| GGAGACATAAAAGTGATTGT+AGG | + | chr5_4:21669402-21669421 | Msa0843790:intron | 35.0% | |
| ! | AAAAGTGATTGTAGGAGCAT+AGG | + | chr5_4:21669410-21669429 | Msa0843790:intron | 35.0% |
| !! | TAGGAGCATAGGATTGATTT+TGG | + | chr5_4:21669421-21669440 | Msa0843790:intron | 35.0% |
| ATTGAACCATACAGTGTGTT+TGG | - | chr5_4:21669641-21669660 | None:intergenic | 35.0% | |
| !! | ATACATGATTGGTTTCACAG+TGG | - | chr5_4:21669795-21669814 | None:intergenic | 35.0% |
| AGTTTATAGAAGGGCTGATA+TGG | + | chr5_4:21669817-21669836 | Msa0843790:intron | 35.0% | |
| GTTTATAGAAGGGCTGATAT+GGG | + | chr5_4:21669818-21669837 | Msa0843790:intron | 35.0% | |
| TGACTAACATATCTCAACAC+AGG | + | chr5_4:21669881-21669900 | Msa0843790:intron | 35.0% | |
| ACCACGATAAGAAGTTGTTA+GGG | - | chr5_4:21669958-21669977 | None:intergenic | 35.0% | |
| ACTTCTTATCGTGGTCAAAA+AGG | + | chr5_4:21669963-21669982 | Msa0843790:CDS | 35.0% | |
| ! | TCAGTATTCAAGTTTGGAAG+AGG | + | chr5_4:21670452-21670471 | Msa0843790:intron | 35.0% |
| GGTTTGATAAGAAATAGCAG+AGG | - | chr5_4:21670584-21670603 | None:intergenic | 35.0% | |
| !! | CGCATGGGTCTTATTAATTA+AGG | + | chr5_4:21670698-21670717 | Msa0843790:intron | 35.0% |
| ! | AGCATAGGTTGAATATGGTT+TGG | + | chr5_4:21670843-21670862 | Msa0843790:intron | 35.0% |
| !!! | AGAGTGAGTTGATTGACTTT+TGG | - | chr5_4:21671147-21671166 | None:intergenic | 35.0% |
| ! | ATGCAAAATCTAGGTCTTGT+TGG | + | chr5_4:21671262-21671281 | Msa0843790:intron | 35.0% |
| TCACATTGTACTCCATTCTA+AGG | + | chr5_4:21671323-21671342 | Msa0843790:intron | 35.0% | |
| AACACAATAAGGCCTTAGAA+TGG | - | chr5_4:21671338-21671357 | None:intergenic | 35.0% | |
| GAACTCAATGGAACACAATA+AGG | - | chr5_4:21671349-21671368 | None:intergenic | 35.0% | |
| ! | TTTTCATGACTACTCTTGCA+GGG | + | chr5_4:21671382-21671401 | Msa0843790:intron | 35.0% |
| TGAATAGAAGTCAAACACAC+CGG | + | chr5_4:21671467-21671486 | Msa0843790:three_prime_UTR | 35.0% | |
| GTCTCATAGTATGTGTTCAA+AGG | + | chr5_4:21671493-21671512 | Msa0843790:three_prime_UTR | 35.0% | |
| ! | TTATGAACATTCTGAGGAGT+AGG | + | chr5_4:21671606-21671625 | Msa0843790:three_prime_UTR | 35.0% |
| TTGTCTCTTTGTGGTACTTG+AGG | - | chr5_4:21666159-21666178 | None:intergenic | 40.0% | |
| CTTCTCTTGAGCCAACAATT+CGG | - | chr5_4:21667075-21667094 | None:intergenic | 40.0% | |
| GCAAGAAATTGAAATCAGCC+CGG | + | chr5_4:21667247-21667266 | Msa0843790:CDS | 40.0% | |
| AGTTGAGGTGGAGAATAAAG+AGG | + | chr5_4:21667352-21667371 | Msa0843790:CDS | 40.0% | |
| GAGAATAAAGAGGTGGAAAG+TGG | + | chr5_4:21667362-21667381 | Msa0843790:CDS | 40.0% | |
| GATAGGTTATCCCTGTGAAT+AGG | + | chr5_4:21667654-21667673 | Msa0843790:intron | 40.0% | |
| ! | GTCGAAATTTGAGATGCCTT+AGG | - | chr5_4:21667725-21667744 | None:intergenic | 40.0% |
| !! | GATGTAGGCTTTGAACTTCT+CGG | - | chr5_4:21667749-21667768 | None:intergenic | 40.0% |
| !!! | GTTTTAGTTGGAGCTGATGT+AGG | - | chr5_4:21667764-21667783 | None:intergenic | 40.0% |
| !!! | GCAGATGCCAATGTTTTAGT+TGG | - | chr5_4:21667776-21667795 | None:intergenic | 40.0% |
| ! | ATCTGCCGCTTCAACTAAAA+AGG | + | chr5_4:21667790-21667809 | Msa0843790:CDS | 40.0% |
| ! | TCTGCCGCTTCAACTAAAAA+GGG | + | chr5_4:21667791-21667810 | Msa0843790:CDS | 40.0% |
| CATAGACATGTGCAAAGATC+TGG | - | chr5_4:21667879-21667898 | None:intergenic | 40.0% | |
| TTGCACATGTCTATGAGCTT+AGG | + | chr5_4:21667884-21667903 | Msa0843790:CDS | 40.0% | |
| AGAGATTTCCTCATAGTACG+AGG | - | chr5_4:21667953-21667972 | None:intergenic | 40.0% | |
| TATGGATAGTATGGGGGATA+AGG | + | chr5_4:21667976-21667995 | Msa0843790:CDS | 40.0% | |
| CTGCAGTTCATTGTTATGGA+TGG | + | chr5_4:21668115-21668134 | Msa0843790:intron | 40.0% | |
| TTCCGCAAAGTTGTAGAAGT+TGG | - | chr5_4:21668258-21668277 | None:intergenic | 40.0% | |
| CTTTGCGGAAAGAAAATGGA+AGG | + | chr5_4:21668268-21668287 | Msa0843790:CDS | 40.0% | |
| CTTGGTTGAAGTTCTCCAAA+AGG | - | chr5_4:21668444-21668463 | None:intergenic | 40.0% | |
| !! | CTTTTGGAGAACTTCAACCA+AGG | + | chr5_4:21668442-21668461 | Msa0843790:intron | 40.0% |
| GCGTCTCCAAACAAAATTGA+AGG | + | chr5_4:21669068-21669087 | Msa0843790:CDS | 40.0% | |
| TGAAGCCAACACAGGAATAT+AGG | - | chr5_4:21669139-21669158 | None:intergenic | 40.0% | |
| CGAAATCCAAACACACTGTA+TGG | + | chr5_4:21669632-21669651 | Msa0843790:intron | 40.0% | |
| !! | CATCACTTTTGGTCGAATTG+AGG | + | chr5_4:21669678-21669697 | Msa0843790:intron | 40.0% |
| ! | CTTTTGGTCGAATTGAGGTT+TGG | + | chr5_4:21669683-21669702 | Msa0843790:intron | 40.0% |
| CTAACATATCTCAACACAGG+AGG | + | chr5_4:21669884-21669903 | Msa0843790:intron | 40.0% | |
| ATAAGAAGTTGTTAGGGGTG+TGG | - | chr5_4:21669952-21669971 | None:intergenic | 40.0% | |
| CCACGATAAGAAGTTGTTAG+GGG | - | chr5_4:21669957-21669976 | None:intergenic | 40.0% | |
| GACCACGATAAGAAGTTGTT+AGG | - | chr5_4:21669959-21669978 | None:intergenic | 40.0% | |
| ATCAAAAAGTCGCGCAGAAA+AGG | + | chr5_4:21669986-21670005 | Msa0843790:CDS | 40.0% | |
| AATCAAGTTAGGGAGACCTA+TGG | + | chr5_4:21670247-21670266 | Msa0843790:intron | 40.0% | |
| ATCAAGTTAGGGAGACCTAT+GGG | + | chr5_4:21670248-21670267 | Msa0843790:intron | 40.0% | |
| ATAACCAAAACAAGACAGCC+AGG | - | chr5_4:21670275-21670294 | None:intergenic | 40.0% | |
| ! | GTATTCAAGTTTGGAAGAGG+TGG | + | chr5_4:21670455-21670474 | Msa0843790:intron | 40.0% |
| !! | CGTGTGACATTTTGACATGA+GGG | - | chr5_4:21670529-21670548 | None:intergenic | 40.0% |
| !! | TCGTGTGACATTTTGACATG+AGG | - | chr5_4:21670530-21670549 | None:intergenic | 40.0% |
| !! | AGGTTGATAGCATTGCTTAG+GGG | - | chr5_4:21670564-21670583 | None:intergenic | 40.0% |
| !! | GAGGTTGATAGCATTGCTTA+GGG | - | chr5_4:21670565-21670584 | None:intergenic | 40.0% |
| !! | AGAGGTTGATAGCATTGCTT+AGG | - | chr5_4:21670566-21670585 | None:intergenic | 40.0% |
| GGAATATGTGGTGACATGTT+TGG | + | chr5_4:21670864-21670883 | Msa0843790:intron | 40.0% | |
| CTCAAATCCAAACATACACC+AGG | + | chr5_4:21671220-21671239 | Msa0843790:intron | 40.0% | |
| TAGGAAACCTGGTGTATGTT+TGG | - | chr5_4:21671230-21671249 | None:intergenic | 40.0% | |
| ACTGTCGACCATTAAGTGTA+AGG | - | chr5_4:21671303-21671322 | None:intergenic | 40.0% | |
| AGGACATTGTCAGAACTCAA+TGG | - | chr5_4:21671361-21671380 | None:intergenic | 40.0% | |
| GCAAGAGTAGTCATGAAAAC+AGG | - | chr5_4:21671381-21671400 | None:intergenic | 40.0% | |
| ! | GTTTTCATGACTACTCTTGC+AGG | + | chr5_4:21671381-21671400 | Msa0843790:intron | 40.0% |
| ACACATACTATGAGACACAC+CGG | - | chr5_4:21671489-21671508 | None:intergenic | 40.0% | |
| ! | TCTAGTTCAAACGTCATGGA+AGG | - | chr5_4:21671687-21671706 | None:intergenic | 40.0% |
| ATTCACTGTCATGGGAGAGA+TGG | + | chr5_4:21666931-21666950 | Msa0843790:CDS | 45.0% | |
| ! | TTCTTCTGTGCTACTGATCC+AGG | - | chr5_4:21667008-21667027 | None:intergenic | 45.0% |
| ATTACAAGAAGATTGCGGCC+CGG | + | chr5_4:21667045-21667064 | Msa0843790:CDS | 45.0% | |
| !! | CGAATTGTTGGCTCAAGAGA+AGG | + | chr5_4:21667073-21667092 | Msa0843790:CDS | 45.0% |
| TCAAGAGAAGGAGATGGAGA+GGG | + | chr5_4:21667085-21667104 | Msa0843790:CDS | 45.0% | |
| GGTATAGATCTGAGCGGTAA+TGG | + | chr5_4:21667140-21667159 | Msa0843790:CDS | 45.0% | |
| ! | GATCTGAGCGGTAATGGTAA+CGG | + | chr5_4:21667146-21667165 | Msa0843790:CDS | 45.0% |
| TAACGCCTGTGAGACTGATT+CGG | + | chr5_4:21667175-21667194 | Msa0843790:CDS | 45.0% | |
| GAATTCCGAATCAGTCTCAC+AGG | - | chr5_4:21667183-21667202 | None:intergenic | 45.0% | |
| GGTACAACTACCTTGAGTGT+TGG | - | chr5_4:21667213-21667232 | None:intergenic | 45.0% | |
| TTCTTGCTTATCGCGTTCCT+CGG | - | chr5_4:21667234-21667253 | None:intergenic | 45.0% | |
| GAAATTGAAATCAGCCCGGT+TGG | + | chr5_4:21667251-21667270 | Msa0843790:CDS | 45.0% | |
| GAGTCATGCGGATGATTTGA+AGG | + | chr5_4:21667286-21667305 | Msa0843790:CDS | 45.0% | |
| TCATGCGGATGATTTGAAGG+AGG | + | chr5_4:21667289-21667308 | Msa0843790:CDS | 45.0% | |
| CCACCTCAACTGATGAACTT+TGG | - | chr5_4:21667343-21667362 | None:intergenic | 45.0% | |
| CCAAAGTTCATCAGTTGAGG+TGG | + | chr5_4:21667340-21667359 | Msa0843790:CDS | 45.0% | |
| TGAGGTGGAGAATAAAGAGG+TGG | + | chr5_4:21667355-21667374 | Msa0843790:CDS | 45.0% | |
| CGTTGAAGCTGAAGATGTGA+AGG | + | chr5_4:21667454-21667473 | Msa0843790:CDS | 45.0% | |
| ! | AGTAACTTGCCTCCTAGGTA+AGG | - | chr5_4:21667828-21667847 | None:intergenic | 45.0% |
| ! | CTAGAAGTAACTTGCCTCCT+AGG | - | chr5_4:21667833-21667852 | None:intergenic | 45.0% |
| GAGGCAAGTTACTTCTAGTG+TGG | + | chr5_4:21667835-21667854 | Msa0843790:CDS | 45.0% | |
| GTAGTATGAGGAACTGGATC+AGG | - | chr5_4:21667920-21667939 | None:intergenic | 45.0% | |
| GGTTCAGTAGTATGAGGAAC+TGG | - | chr5_4:21667926-21667945 | None:intergenic | 45.0% | |
| ! | GGAACTGGTTCAGTAGTATG+AGG | - | chr5_4:21667932-21667951 | None:intergenic | 45.0% |
| AACCAGTTCCTCGTACTATG+AGG | + | chr5_4:21667942-21667961 | Msa0843790:CDS | 45.0% | |
| TTCCTCATAGTACGAGGAAC+TGG | - | chr5_4:21667947-21667966 | None:intergenic | 45.0% | |
| !!! | CTTCTACGGAAGTTTTTGGC+TGG | - | chr5_4:21668045-21668064 | None:intergenic | 45.0% |
| ! | TCTTTTCTCCATCCTCTCAG+CGG | - | chr5_4:21668841-21668860 | None:intergenic | 45.0% |
| GAGAGGATGGAGAAAAGAAG+TGG | + | chr5_4:21668843-21668862 | Msa0843790:CDS | 45.0% | |
| CACTTAAGTGAAGCCAACAC+AGG | - | chr5_4:21669147-21669166 | None:intergenic | 45.0% | |
| GGCTGATATGGGATATGAGT+TGG | + | chr5_4:21669829-21669848 | Msa0843790:intron | 45.0% | |
| CTCAACACAGGAGGAAAAAG+AGG | + | chr5_4:21669893-21669912 | Msa0843790:intron | 45.0% | |
| CCCCTAACAACTTCTTATCG+TGG | + | chr5_4:21669954-21669973 | Msa0843790:CDS | 45.0% | |
| ACCACCAACACATGCTCATT+TGG | - | chr5_4:21670319-21670338 | None:intergenic | 45.0% | |
| GATAGCATTGCTTAGGGGAA+TGG | - | chr5_4:21670559-21670578 | None:intergenic | 45.0% | |
| !! | ATCTAGGTCTTGTTGGCTTC+TGG | + | chr5_4:21671269-21671288 | Msa0843790:intron | 45.0% |
| CAAGTGGTGAAGGTAAAGAG+AGG | + | chr5_4:21671438-21671457 | Msa0843790:three_prime_UTR | 45.0% | |
| ! | TGAACATTCTGAGGAGTAGG+AGG | + | chr5_4:21671609-21671628 | Msa0843790:three_prime_UTR | 45.0% |
| ! | GTTGAGAAGTGTGCTACACC+TGG | + | chr5_4:21666987-21667006 | Msa0843790:CDS | 50.0% |
| AGCCAACAATTCGGCTTTCC+GGG | - | chr5_4:21667066-21667085 | None:intergenic | 50.0% | |
| GAGCCAACAATTCGGCTTTC+CGG | - | chr5_4:21667067-21667086 | None:intergenic | 50.0% | |
| ! | GTTGGCTCAAGAGAAGGAGA+TGG | + | chr5_4:21667079-21667098 | Msa0843790:CDS | 50.0% |
| CTCAAGAGAAGGAGATGGAG+AGG | + | chr5_4:21667084-21667103 | Msa0843790:CDS | 50.0% | |
| CACTCAAGGTAGTTGTACCG+AGG | + | chr5_4:21667214-21667233 | Msa0843790:CDS | 50.0% | |
| !! | ATCAGCCCGGTTGGTGATAT+CGG | + | chr5_4:21667260-21667279 | Msa0843790:CDS | 50.0% |
| TGATATCGGCAGGAGTCATG+CGG | + | chr5_4:21667274-21667293 | Msa0843790:CDS | 50.0% | |
| TGCGGATGATTTGAAGGAGG+AGG | + | chr5_4:21667292-21667311 | Msa0843790:CDS | 50.0% | |
| GGATGATTTGAAGGAGGAGG+AGG | + | chr5_4:21667295-21667314 | Msa0843790:CDS | 50.0% | |
| GAGGTGGAAAGTGGATCACA+TGG | + | chr5_4:21667371-21667390 | Msa0843790:CDS | 50.0% | |
| ACCAGTGGCAGCAAAACCTA+AGG | + | chr5_4:21667706-21667725 | Msa0843790:CDS | 50.0% | |
| GAAATCCGCAGTCCTTACCT+AGG | + | chr5_4:21667813-21667832 | Msa0843790:CDS | 50.0% | |
| GGAACTGGATCAGGCTTACT+TGG | - | chr5_4:21667911-21667930 | None:intergenic | 50.0% | |
| TCAGAGAAAGGGAAAGCGGT+AGG | + | chr5_4:21668906-21668925 | Msa0843790:intron | 50.0% | |
| CCAACACATGCTCATTTGGC+AGG | - | chr5_4:21670315-21670334 | None:intergenic | 50.0% | |
| CCTGCCAAATGAGCATGTGT+TGG | + | chr5_4:21670312-21670331 | Msa0843790:intron | 50.0% | |
| GCCAAATGAGCATGTGTTGG+TGG | + | chr5_4:21670315-21670334 | Msa0843790:intron | 50.0% | |
| ACCACTTGTGCAGCTATCGA+CGG | - | chr5_4:21671426-21671445 | None:intergenic | 50.0% | |
| GATAGCTGCACAAGTGGTGA+AGG | + | chr5_4:21671428-21671447 | Msa0843790:exon | 50.0% | |
| ! | CATTCTGAGGAGTAGGAGGA+AGG | + | chr5_4:21671613-21671632 | Msa0843790:intron | 50.0% |
| AGAAGGAGATGGAGAGGGAG+AGG | + | chr5_4:21667090-21667109 | Msa0843790:CDS | 55.0% | |
| GAAGGAGATGGAGAGGGAGA+GGG | + | chr5_4:21667091-21667110 | Msa0843790:CDS | 55.0% | |
| TCCTGCCGATATCACCAACC+GGG | - | chr5_4:21667268-21667287 | None:intergenic | 55.0% | |
| CTCCTGCCGATATCACCAAC+CGG | - | chr5_4:21667269-21667288 | None:intergenic | 55.0% | |
| GAAGGAGGAGGAGGAAGTTG+CGG | + | chr5_4:21667304-21667323 | Msa0843790:CDS | 55.0% | |
| ! | GGAGGAGGAAGTTGCGGTTT+TGG | + | chr5_4:21667310-21667329 | Msa0843790:CDS | 55.0% |
| ! | GCCTTAGGTTTTGCTGCCAC+TGG | - | chr5_4:21667710-21667729 | None:intergenic | 55.0% |
| ATCCGCAGTCCTTACCTAGG+AGG | + | chr5_4:21667816-21667835 | Msa0843790:CDS | 55.0% | |
| TGCCTCCTAGGTAAGGACTG+CGG | - | chr5_4:21667821-21667840 | None:intergenic | 55.0% | |
| TATCCTGACAGGCTCCTCCA+AGG | + | chr5_4:21668214-21668233 | Msa0843790:intron | 55.0% | |
| ATCCTGACAGGCTCCTCCAA+GGG | + | chr5_4:21668215-21668234 | Msa0843790:intron | 55.0% | |
| TTAGGGAGACCTATGGGACC+TGG | + | chr5_4:21670254-21670273 | Msa0843790:intron | 55.0% | |
| ACAAGACAGCCAGGTCCCAT+AGG | - | chr5_4:21670266-21670285 | None:intergenic | 55.0% | |
| !!! | GGGACCTGGCTGTCTTGTTT+TGG | + | chr5_4:21670268-21670287 | Msa0843790:intron | 55.0% |
| GGCCCGGAAAGCCGAATTGT+TGG | + | chr5_4:21667061-21667080 | Msa0843790:CDS | 60.0% | |
| TCCTGACAGGCTCCTCCAAG+GGG | + | chr5_4:21668216-21668235 | Msa0843790:intron | 60.0% | |
| ATAGGCCTGCTACCGCTGAG+AGG | + | chr5_4:21668826-21668845 | Msa0843790:intron | 60.0% | |
| TCCATCCTCTCAGCGGTAGC+AGG | - | chr5_4:21668834-21668853 | None:intergenic | 60.0% | |
| GCCGTCGATAGCTGCACAAG+TGG | + | chr5_4:21671422-21671441 | Msa0843790:exon | 60.0% | |
| !! | GCCCGGTTGGTGATATCGGC+AGG | + | chr5_4:21667264-21667283 | Msa0843790:CDS | 65.0% |
| CCTGACAGGCTCCTCCAAGG+GGG | + | chr5_4:21668217-21668236 | Msa0843790:intron | 65.0% | |
| TTCGACGCAGTCCCCCTTGG+AGG | - | chr5_4:21668231-21668250 | None:intergenic | 65.0% | |
| TCCAAGGGGGACTGCGTCGA+AGG | + | chr5_4:21668230-21668249 | Msa0843790:CDS | 65.0% | |
| ACCTTCGACGCAGTCCCCCT+TGG | - | chr5_4:21668234-21668253 | None:intergenic | 65.0% | |
| GCCTGCTACCGCTGAGAGGA+TGG | + | chr5_4:21668830-21668849 | Msa0843790:CDS | 65.0% | |
| CCCCCTTGGAGGAGCCTGTC+AGG | - | chr5_4:21668220-21668239 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 21666134 | 21671761 | 21666134 | ID=Msa0843790;Name=Msa0843790 |
| chr5_4 | mRNA | 21666134 | 21671761 | 21666134 | ID=Msa0843790-mRNA-1;Parent=Msa0843790;Name=Msa0843790-mRNA-1;_AED=0.03;_eAED=0.03;_QI=342|1|1|1|0.66|0.5|10|307|499 |
| chr5_4 | exon | 21666134 | 21666475 | 21666134 | ID=Msa0843790-mRNA-1:exon:8909;Parent=Msa0843790-mRNA-1 |
| chr5_4 | exon | 21666764 | 21666799 | 21666764 | ID=Msa0843790-mRNA-1:exon:8910;Parent=Msa0843790-mRNA-1 |
| chr5_4 | exon | 21666900 | 21667565 | 21666900 | ID=Msa0843790-mRNA-1:exon:8911;Parent=Msa0843790-mRNA-1 |
| chr5_4 | exon | 21667659 | 21668090 | 21667659 | ID=Msa0843790-mRNA-1:exon:8912;Parent=Msa0843790-mRNA-1 |
| chr5_4 | exon | 21668225 | 21668289 | 21668225 | ID=Msa0843790-mRNA-1:exon:8913;Parent=Msa0843790-mRNA-1 |
| chr5_4 | exon | 21668830 | 21668923 | 21668830 | ID=Msa0843790-mRNA-1:exon:8914;Parent=Msa0843790-mRNA-1 |
| chr5_4 | exon | 21669018 | 21669089 | 21669018 | ID=Msa0843790-mRNA-1:exon:8915;Parent=Msa0843790-mRNA-1 |
| chr5_4 | exon | 21669903 | 21670007 | 21669903 | ID=Msa0843790-mRNA-1:exon:8916;Parent=Msa0843790-mRNA-1 |
| chr5_4 | exon | 21671403 | 21671629 | 21671403 | ID=Msa0843790-mRNA-1:exon:8917;Parent=Msa0843790-mRNA-1 |
| chr5_4 | exon | 21671652 | 21671761 | 21671652 | ID=Msa0843790-mRNA-1:exon:8918;Parent=Msa0843790-mRNA-1 |
| chr5_4 | five_prime_UTR | 21666134 | 21666475 | 21666134 | ID=Msa0843790-mRNA-1:five_prime_utr;Parent=Msa0843790-mRNA-1 |
| chr5_4 | CDS | 21666764 | 21666799 | 21666764 | ID=Msa0843790-mRNA-1:cds;Parent=Msa0843790-mRNA-1 |
| chr5_4 | CDS | 21666900 | 21667565 | 21666900 | ID=Msa0843790-mRNA-1:cds;Parent=Msa0843790-mRNA-1 |
| chr5_4 | CDS | 21667659 | 21668090 | 21667659 | ID=Msa0843790-mRNA-1:cds;Parent=Msa0843790-mRNA-1 |
| chr5_4 | CDS | 21668225 | 21668289 | 21668225 | ID=Msa0843790-mRNA-1:cds;Parent=Msa0843790-mRNA-1 |
| chr5_4 | CDS | 21668830 | 21668923 | 21668830 | ID=Msa0843790-mRNA-1:cds;Parent=Msa0843790-mRNA-1 |
| chr5_4 | CDS | 21669018 | 21669089 | 21669018 | ID=Msa0843790-mRNA-1:cds;Parent=Msa0843790-mRNA-1 |
| chr5_4 | CDS | 21669903 | 21670007 | 21669903 | ID=Msa0843790-mRNA-1:cds;Parent=Msa0843790-mRNA-1 |
| chr5_4 | CDS | 21671403 | 21671432 | 21671403 | ID=Msa0843790-mRNA-1:cds;Parent=Msa0843790-mRNA-1 |
| chr5_4 | three_prime_UTR | 21671433 | 21671629 | 21671433 | ID=Msa0843790-mRNA-1:three_prime_utr;Parent=Msa0843790-mRNA-1 |
| chr5_4 | three_prime_UTR | 21671652 | 21671761 | 21671652 | ID=Msa0843790-mRNA-1:three_prime_utr;Parent=Msa0843790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
