AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0483740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0483740 MtrunA17_Chr5g0405801 89.698 796 43 6 1 759 1 794 0.0 1419
Msa0483740 MtrunA17_Chr1g0156861 69.598 796 200 8 1 759 1 791 0.0 1094
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0483740 AT2G17790.1 67.965 796 209 8 1 759 1 787 0.0 1054
Msa0483740 AT1G75850.1 67.213 793 218 7 3 759 4 790 0.0 1047
Msa0483740 AT3G51310.1 65.700 793 222 10 7 759 4 786 0.0 991
Msa0483740 AT1G75850.2 69.929 562 151 3 211 759 1 557 0.0 786

Find 184 sgRNAs with CRISPR-Local

Find 727 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCAATTGCATTGCTTAATT+TGG 0.084194 3_4:-490598 None:intergenic
AATTTAATTAATAGCCAATT+TGG 0.112187 3_4:+486310 Msa0483740:five_prime_UTR
AGGCTTGCTGTCGGGCTTTC+TGG 0.122684 3_4:+489320 Msa0483740:CDS
CTGCTTTGAATTGTCTTCTT+TGG 0.167989 3_4:+497522 Msa0483740:three_prime_UTR
TATGCCTTAAGCGGGCTTTA+AGG 0.189667 3_4:+497045 Msa0483740:CDS
TTGAAAGCCTTTCCATTAAC+TGG 0.202513 3_4:-490518 None:intergenic
TGTTCATTTCTGTGAAATTT+TGG 0.207828 3_4:-488600 None:intergenic
CTGGTCTGCAGGGGCCTTCC+CGG 0.210811 3_4:+489339 Msa0483740:CDS
CAAAGGTATACACAGATTTA+TGG 0.217403 3_4:+497752 Msa0483740:three_prime_UTR
GACAGTACTATCCCAGTTAA+TGG 0.262602 3_4:+490506 Msa0483740:CDS
CATTCATAATTAACTCAATT+AGG 0.271218 3_4:-497294 None:intergenic
ATTTAATTAATAGCCAATTT+GGG 0.274260 3_4:+486311 Msa0483740:five_prime_UTR
AGCATTGTTTGAACTGATAA+AGG 0.285330 3_4:+494174 Msa0483740:CDS
TGCAATCCATCAAGTAGAAT+TGG 0.299727 3_4:-489733 None:intergenic
TGATCCAGAAGAGATGTTTA+AGG 0.306305 3_4:+494474 Msa0483740:CDS
AGTCAAGAAGAAAATCCTTT+TGG 0.307658 3_4:+495376 Msa0483740:CDS
CCTTGACGTTCCAACTAATA+AGG 0.309908 3_4:+494002 Msa0483740:CDS
GTTGGCCCAATTCTACTTGA+TGG 0.310066 3_4:+489727 Msa0483740:CDS
TATGCTTGCTCACATTTGTT+TGG 0.312574 3_4:+496317 Msa0483740:CDS
CACAGAAATGAACAAACTTT+GGG 0.324886 3_4:+488609 Msa0483740:CDS
ACAGCTATCCATTTGATAAT+AGG 0.329025 3_4:+496088 Msa0483740:CDS
GATCATCATTATAAAACATT+TGG 0.340860 3_4:-494456 None:intergenic
TCACAGAAATGAACAAACTT+TGG 0.345532 3_4:+488608 Msa0483740:CDS
GGGCGCTTACCCTCAACTTC+AGG 0.349713 3_4:+489808 Msa0483740:CDS
AAGCCCGCTTAAGGCATAAT+AGG 0.353896 3_4:-497040 None:intergenic
TGTCGGGCTTTCTGGTCTGC+AGG 0.367999 3_4:+489328 Msa0483740:CDS
GGATCATCACATGAGCAAAT+TGG 0.377606 3_4:-497494 None:intergenic
CTCACCTTAAACATCTCTTC+TGG 0.378777 3_4:-494478 None:intergenic
ATGCTTGCTCACATTTGTTT+GGG 0.380066 3_4:+496318 Msa0483740:CDS
AGTTACAGTTGCTGCTATCC+AGG 0.385834 3_4:+497270 Msa0483740:CDS
TCCTGCTAAGGATGTTCTTA+AGG 0.387412 3_4:+487999 Msa0483740:CDS
CAAACTCTTGATGTGCTGTT+GGG 0.388585 3_4:+489788 Msa0483740:CDS
ATGTCTTCGGTGTTGAGAAC+AGG 0.390066 3_4:+496128 Msa0483740:CDS
TTCCTCGCCGCCGGCATCGC+CGG 0.392272 3_4:+486520 Msa0483740:CDS
TAAGAATAAGAATATGCTTA+TGG 0.400405 3_4:-486370 None:intergenic
AACACAAACTTGTGGTTTCA+CGG 0.401490 3_4:-497552 None:intergenic
AAGCTCGTAAAGATCAATAA+TGG 0.401737 3_4:-486994 None:intergenic
AGACAATTCAAAGCAGTTGC+TGG 0.402550 3_4:-497515 None:intergenic
GCATTGTTTGAACTGATAAA+GGG 0.403489 3_4:+494175 Msa0483740:CDS
AAAGCATCTGCCGATGGATC+TGG 0.409395 3_4:-497340 None:intergenic
TCCAAATTAAGCAATGCAAT+TGG 0.414365 3_4:+490597 Msa0483740:CDS
GTTTGCAAATGGTACTCATC+AGG 0.414564 3_4:-489770 None:intergenic
CAGCCTGACATGCCCACTGC+TGG 0.415024 3_4:+493464 Msa0483740:CDS
CAGACCATCGAGACTCTGTT+AGG 0.417291 3_4:+495719 Msa0483740:intron
CTGAGTTGAGGCTTGCTGTC+GGG 0.419435 3_4:+489312 Msa0483740:CDS
GAGGAACTTCTCTTCATCTT+CGG 0.420874 3_4:-486503 None:intergenic
TCCACATGTCAAACCTTGAT+TGG 0.421015 3_4:-497433 None:intergenic
CAATCCTTAAAGCCCGCTTA+AGG 0.421497 3_4:-497049 None:intergenic
CTGTTGAAGTCCGGCGATGC+CGG 0.421693 3_4:-486530 None:intergenic
TTTCTCGTTTCTCCTTCTCC+CGG 0.421907 3_4:-489358 None:intergenic
GCAAACTCTTGATGTGCTGT+TGG 0.425162 3_4:+489787 Msa0483740:CDS
TGGTCTGCAGGGGCCTTCCC+GGG 0.427856 3_4:+489340 Msa0483740:CDS
GCAAAATGTTGCCGGCGTGC+TGG 0.429765 3_4:-487019 None:intergenic
TTGGGTGCGGATGCAGCATC+AGG 0.431226 3_4:+488627 Msa0483740:CDS
ACTCCAGCAGTGGGCATGTC+AGG 0.434101 3_4:-493467 None:intergenic
CGTTTCTCCTTCTCCCGGGA+AGG 0.438675 3_4:-489353 None:intergenic
CAATCGCGGCAAAATGTTGC+CGG 0.441838 3_4:-487027 None:intergenic
TGCAAATGCTGCACAACAAA+TGG 0.444033 3_4:+497070 Msa0483740:CDS
CGAGACTCTGTTAGGTGTCC+TGG 0.448133 3_4:+495727 Msa0483740:CDS
GTTGCCATGACCTTATTAGT+TGG 0.450360 3_4:-494012 None:intergenic
TTCAAACTACCCTCGTGTAA+TGG 0.463333 3_4:+493975 Msa0483740:CDS
ACAGTGAAAGGCAGACGCTT+TGG 0.463935 3_4:-494703 None:intergenic
GTCGGGCTTTCTGGTCTGCA+GGG 0.464275 3_4:+489329 Msa0483740:CDS
GAAGAGTTCCTATTATCAAA+TGG 0.465787 3_4:-496096 None:intergenic
TCATGTTCTCAGTCAGATAG+AGG 0.467619 3_4:+489530 Msa0483740:CDS
TTTACTGTCTACAGTTGGTC+AGG 0.469598 3_4:+495332 Msa0483740:intron
TCAGCATAATCTAGTCGATC+GGG 0.469613 3_4:-493536 None:intergenic
TGAGAAATATGAACCAATCA+AGG 0.471525 3_4:+497420 Msa0483740:CDS
AAGCATATTCTTATTCTTAG+CGG 0.478257 3_4:+486374 Msa0483740:five_prime_UTR
TATCTTTACTTCTTTGAGAA+GGG 0.481938 3_4:+497238 Msa0483740:CDS
CTTCAAAGGATGCATGTCTT+CGG 0.482111 3_4:+496115 Msa0483740:CDS
GCAATCCATCAAGTAGAATT+GGG 0.487567 3_4:-489732 None:intergenic
GCAGGGGCCTTCCCGGGAGA+AGG 0.490072 3_4:+489346 Msa0483740:CDS
TTTACCTGCTCAAGTACTCT+AGG 0.496535 3_4:-489588 None:intergenic
ACTGATAAAGGGGCTTATCA+AGG 0.497046 3_4:+494186 Msa0483740:CDS
AATGAAGAGCATTACTGATC+CGG 0.499744 3_4:-497114 None:intergenic
GATAGCTGTGACCTGTGCTC+TGG 0.502526 3_4:-496074 None:intergenic
ATTCTACATGCACCGTGCAT+TGG 0.505624 3_4:+486558 Msa0483740:CDS
TTTAAAGAAGAAAACATAAG+AGG 0.507523 3_4:-494730 None:intergenic
TGCGCGCATTTGATCAATTG+AGG 0.507817 3_4:+486928 Msa0483740:CDS
GTATCTTTACTTCTTTGAGA+AGG 0.508035 3_4:+497237 Msa0483740:CDS
CCGACAGCAAGCCTCAACTC+AGG 0.510046 3_4:-489311 None:intergenic
TAATTAACTCAATTAGGCCC+TGG 0.511873 3_4:-497288 None:intergenic
CCTGAGTTGAGGCTTGCTGT+CGG 0.512700 3_4:+489311 Msa0483740:CDS
ACTGAAATGACCTCTTCATC+AGG 0.513627 3_4:-494223 None:intergenic
TCCTTAAGAACATCCTTAGC+AGG 0.514144 3_4:-488000 None:intergenic
TAGCAGCAACTGTAACTTGT+GGG 0.515070 3_4:-497264 None:intergenic
ATTTGATCAATTGAGGAAGC+TGG 0.517144 3_4:+486935 Msa0483740:CDS
GCAAAACGGGAGAAATTAAG+AGG 0.520084 3_4:+486345 Msa0483740:five_prime_UTR
TTCTCGTTTCTCCTTCTCCC+GGG 0.525927 3_4:-489357 None:intergenic
ACTTTAACTCACAAGGCCAC+AGG 0.526213 3_4:+496154 Msa0483740:CDS
GAATGAATTCTGTTGAAGTC+CGG 0.528606 3_4:-486539 None:intergenic
GGAGAAGGAGAAACGAGAAA+AGG 0.529242 3_4:+489361 Msa0483740:CDS
TGAAAGCCTTTCCATTAACT+GGG 0.530830 3_4:-490517 None:intergenic
AGATTATGCTGATCAAGTCT+TGG 0.535438 3_4:+493547 Msa0483740:CDS
GAAGAGAAGTTCCTCGCCGC+CGG 0.535875 3_4:+486511 Msa0483740:CDS
ATGTCATTATATTTCTCTAG+TGG 0.538353 3_4:-493934 None:intergenic
TTTAATTAATAGCCAATTTG+GGG 0.539337 3_4:+486312 Msa0483740:five_prime_UTR
GATCATGATAACATGAAAGA+TGG 0.539688 3_4:+496346 Msa0483740:CDS
GTGAGGAAGCACATACTGAC+TGG 0.539810 3_4:+494676 Msa0483740:CDS
GCACATCAAGAGTTTGCAAA+TGG 0.543783 3_4:-489781 None:intergenic
GTGTTTGTTATGTTACACTT+TGG 0.544738 3_4:+497470 Msa0483740:three_prime_UTR
AGGGTAGTTTGAAAGCTTCA+AGG 0.545666 3_4:-493965 None:intergenic
AAACAAAAGGGTGGTACAGT+TGG 0.548365 3_4:+497397 Msa0483740:CDS
GTCCGGCGATGCCGGCGGCG+AGG 0.550071 3_4:-486522 None:intergenic
GTTGATGCATCATCTCCAAA+AGG 0.553449 3_4:-495391 None:intergenic
GTTCCCTAACCTGAAGTTGA+GGG 0.556360 3_4:-489817 None:intergenic
CACTGCAACTCCAGATCCAT+CGG 0.556884 3_4:+497330 Msa0483740:CDS
ATAAGAGGTGGAACAGTGAA+AGG 0.559617 3_4:-494715 None:intergenic
ATCGAAGGAAGCTCCTGCTA+AGG 0.560242 3_4:+487987 Msa0483740:CDS
CGTGAATTGCAAAGATGAGT+TGG 0.561375 3_4:+489709 Msa0483740:CDS
AGGTATCTCCTCTGTACAGT+AGG 0.562543 3_4:+487949 Msa0483740:intron
CACAACTGCAATGCTAACTC+TGG 0.562797 3_4:-495752 None:intergenic
TGATAATAGGAACTCTTCAA+AGG 0.563619 3_4:+496101 Msa0483740:CDS
AATGCAGCACGAGGTAGCAC+CGG 0.565115 3_4:+497095 Msa0483740:CDS
GAAGCTGGAGATGTTCTTCG+AGG 0.574256 3_4:+486950 Msa0483740:CDS
AGGTAAAATTGAGGACAAGA+AGG 0.574526 3_4:+493879 Msa0483740:CDS
ATCGAAGTTGAGAACTTCGC+CGG 0.575166 3_4:+486459 Msa0483740:five_prime_UTR
GGCTTATCAAGGATTCTGAC+GGG 0.575698 3_4:+494197 Msa0483740:CDS
AGTCCTATTATGCCTTAAGC+GGG 0.575988 3_4:+497037 Msa0483740:CDS
CCTTATTAGTTGGAACGTCA+AGG 0.577662 3_4:-494002 None:intergenic
CTCTGGCAAAGGTAAAATTG+AGG 0.578328 3_4:+493870 Msa0483740:CDS
ATCAGCATAATCTAGTCGAT+CGG 0.578728 3_4:-493537 None:intergenic
GGCTGCAAATGACTGTGAGT+TGG 0.580108 3_4:+495871 Msa0483740:intron
GCAATGCTAACTCTGGTGCC+AGG 0.580206 3_4:-495745 None:intergenic
TTGAAGTCCGGCGATGCCGG+CGG 0.582299 3_4:-486527 None:intergenic
TGTCTTCGGTGTTGAGAACA+GGG 0.583710 3_4:+496129 Msa0483740:CDS
TTTGCAAATGGTACTCATCA+GGG 0.584013 3_4:-489769 None:intergenic
CAACATCTTTGTACATCTCA+AGG 0.584038 3_4:-489560 None:intergenic
CTTTAACTCACAAGGCCACA+GGG 0.584542 3_4:+496155 Msa0483740:CDS
TAAAGTTACAACTCCAGCAG+TGG 0.587524 3_4:-493477 None:intergenic
AAAGAAGAAAACATAAGAGG+TGG 0.590024 3_4:-494727 None:intergenic
CATTGTTTGAACTGATAAAG+GGG 0.590196 3_4:+494176 Msa0483740:CDS
TACGAGCTTGTCCAGCACGC+CGG 0.590451 3_4:+487008 Msa0483740:CDS
TTATGCTGCTTCAAGTGCAG+AGG 0.591369 3_4:+490542 Msa0483740:CDS
CGTTCCAACTAATAAGGTCA+TGG 0.594538 3_4:+494008 Msa0483740:CDS
ATCTGTATACATCAAATCGA+AGG 0.594866 3_4:+487972 Msa0483740:CDS
CGACAGCAAGCCTCAACTCA+GGG 0.595611 3_4:-489310 None:intergenic
GCTTCCTAGAGTACTTGAGC+AGG 0.596217 3_4:+489584 Msa0483740:CDS
ATACCAGGATTCCAGAGCAC+AGG 0.596376 3_4:+496063 Msa0483740:intron
CAGGGATACTTTAACTCACA+AGG 0.597480 3_4:+496147 Msa0483740:CDS
TACTATCCCAGTTAATGGAA+AGG 0.598378 3_4:+490511 Msa0483740:CDS
AATTGTTATACAGGTCATAG+AGG 0.598940 3_4:+493439 Msa0483740:intron
GAGTCCTATTATGCCTTAAG+CGG 0.599450 3_4:+497036 Msa0483740:intron
GGGCTTATCAAGGATTCTGA+CGG 0.602860 3_4:+494196 Msa0483740:CDS
TCGGGCTTTCTGGTCTGCAG+GGG 0.603686 3_4:+489330 Msa0483740:CDS
TGACGGGACTCCTGATGAAG+AGG 0.605204 3_4:+494213 Msa0483740:CDS
CAAAGTTCGTAGTATTTGTG+AGG 0.605691 3_4:-486790 None:intergenic
GTTACAGTTGCTGCTATCCA+GGG 0.605864 3_4:+497271 Msa0483740:CDS
AAATGAACAAACTTTGGGTG+CGG 0.606382 3_4:+488614 Msa0483740:CDS
AGTTCCCTAACCTGAAGTTG+AGG 0.609828 3_4:-489818 None:intergenic
ATTAAGCAATGCAATTGGCA+AGG 0.614576 3_4:+490602 Msa0483740:CDS
GACACCTAACAGAGTCTCGA+TGG 0.616245 3_4:-495723 None:intergenic
TCTTAGCTGACCCTGAGTTG+AGG 0.619517 3_4:+489300 Msa0483740:intron
ATTATTCTAGTTGTGCACAA+AGG 0.620310 3_4:+497735 Msa0483740:three_prime_UTR
CTGTATATAGCGCATAGTAG+TGG 0.620971 3_4:-497368 None:intergenic
CATGTTCTCAGTCAGATAGA+GGG 0.621850 3_4:+489531 Msa0483740:CDS
GCTAAGAAAGCATCTGCCGA+TGG 0.622652 3_4:-497346 None:intergenic
ATATCATGAACACAAACTTG+TGG 0.623862 3_4:-497560 None:intergenic
ACGGAGGAGTTACCAATGCA+CGG 0.624713 3_4:-486570 None:intergenic
AGGAGAAACGAGAAAAGGAG+AGG 0.627935 3_4:+489366 Msa0483740:CDS
AAAGTTACAACTCCAGCAGT+GGG 0.628281 3_4:-493476 None:intergenic
GGATGAAGATGATTTCAAAG+AGG 0.628375 3_4:+494408 Msa0483740:CDS
ACCAATCAAGGTTTGACATG+TGG 0.632076 3_4:+497432 Msa0483740:exon
GTTGTGCTTGCAATGTGCTG+AGG 0.641551 3_4:+495769 Msa0483740:CDS
TTAATTAATAGCCAATTTGG+GGG 0.645092 3_4:+486313 Msa0483740:five_prime_UTR
ATAACATGAAAGATGGAGAG+AGG 0.651839 3_4:+496353 Msa0483740:CDS
CAGTTGGTCAGGCAGTTGCA+AGG 0.652495 3_4:+495343 Msa0483740:intron
TGCAGATCATTGAAACTGTG+AGG 0.652814 3_4:+494659 Msa0483740:intron
TTCGAGGAAGAGACTCGTCG+TGG 0.654957 3_4:+486966 Msa0483740:CDS
AATAACACATACCTTGTCAG+AGG 0.659815 3_4:-494079 None:intergenic
CCGGAGAAAATGATGCTCGA+CGG 0.665622 3_4:+486478 Msa0483740:exon
ATAGCAGCAACTGTAACTTG+TGG 0.666553 3_4:-497265 None:intergenic
ACGCATTTCTACCTCTGACA+AGG 0.688272 3_4:+494068 Msa0483740:CDS
CATAATCTAGTCGATCGGGG+TGG 0.695269 3_4:-493532 None:intergenic
CAAATGGCAAATGCAGCACG+AGG 0.695757 3_4:+497086 Msa0483740:CDS
CAGCATAATCTAGTCGATCG+GGG 0.697857 3_4:-493535 None:intergenic
TCAAGGAATTCCATTACACG+AGG 0.703879 3_4:-493985 None:intergenic
AGGAAGCACATACTGACTGG+AGG 0.706279 3_4:+494679 Msa0483740:CDS
TCTAGCGCCACTTACAATCG+CGG 0.707563 3_4:-487041 None:intergenic
GAATTCAATAATCACCCCTG+TGG 0.722096 3_4:-496170 None:intergenic
TTTAACTCACAAGGCCACAG+GGG 0.727627 3_4:+496156 Msa0483740:CDS
ATACAGATCCTACTGTACAG+AGG 0.740473 3_4:-487957 None:intergenic
CAAGGAATTCCATTACACGA+GGG 0.748600 3_4:-493984 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAACTTAGAAAAAAAA+AGG - chr3_4:488392-488411 None:intergenic 10.0%
!! ATAAAATTGTAATAGATATT+TGG - chr3_4:490406-490425 None:intergenic 10.0%
!!! TTCAAATTTTTAATATAAAC+TGG + chr3_4:492300-492319 Msa0483740:intron 10.0%
!!! TCAAATTTTTAATATAAACT+GGG + chr3_4:492301-492320 Msa0483740:intron 10.0%
!! AAAAAATGATTAGAAAAAAA+TGG - chr3_4:492743-492762 None:intergenic 10.0%
!!! ATTAACATTTTAAATAAAAC+AGG - chr3_4:492947-492966 None:intergenic 10.0%
!!! TTATTGATTATTTTCATTTA+AGG + chr3_4:493770-493789 Msa0483740:intron 10.0%
!! GATAATTAATGATTAATTTA+AGG + chr3_4:494935-494954 Msa0483740:intron 10.0%
!! AAATATTAAATTATTTCACT+GGG - chr3_4:495297-495316 None:intergenic 10.0%
!! TAAATATTAAATTATTTCAC+TGG - chr3_4:495298-495317 None:intergenic 10.0%
!! TTATAAATAAATAAAAGAAC+CGG - chr3_4:495474-495493 None:intergenic 10.0%
!!! TTTTTCATGATAAAAATTTA+TGG + chr3_4:496007-496026 Msa0483740:intron 10.0%
!! AATTTAATTAATAGCCAATT+TGG + chr3_4:486310-486329 Msa0483740:five_prime_UTR 15.0%
!! ATTTAATTAATAGCCAATTT+GGG + chr3_4:486311-486330 Msa0483740:five_prime_UTR 15.0%
!!! GATATTTTATGATTATGATT+AGG + chr3_4:487929-487948 Msa0483740:intron 15.0%
!!! ATTAATTAACAAGTTTTCAT+TGG + chr3_4:490020-490039 Msa0483740:intron 15.0%
!!! ACAAATTTAGAATTATTGAA+TGG - chr3_4:490119-490138 None:intergenic 15.0%
!!! TATTGATATTTATGCTTTTA+AGG + chr3_4:490241-490260 Msa0483740:intron 15.0%
!! TAAATAGAGCTTATAAATAT+TGG + chr3_4:491190-491209 Msa0483740:intron 15.0%
!! ATCTAGTATTAGTATAAATA+TGG - chr3_4:491325-491344 None:intergenic 15.0%
!! ATCTAGTATTAGTATAAATA+TGG - chr3_4:491325-491344 None:intergenic 15.0%
!! ATATTCCAAAACTATAATAA+TGG - chr3_4:492512-492531 None:intergenic 15.0%
!! AATGAAATAAATAATGTCAA+AGG - chr3_4:493652-493671 None:intergenic 15.0%
!! TTATTTATTTCATTAACTCA+TGG + chr3_4:493658-493677 Msa0483740:intron 15.0%
!! TTAAGGTTATAATTAGTATA+AGG + chr3_4:494952-494971 Msa0483740:intron 15.0%
!! TTAATTATTTATACGCAATT+AGG - chr3_4:495516-495535 None:intergenic 15.0%
!!! ATTTTTATCATGAAAAAAAG+AGG - chr3_4:496004-496023 None:intergenic 15.0%
!! TTTAATTAATAGCCAATTTG+GGG + chr3_4:486312-486331 Msa0483740:five_prime_UTR 20.0%
!! TAAGAATAAGAATATGCTTA+TGG - chr3_4:486373-486392 None:intergenic 20.0%
!!! TTTTTTAACTGTTTGTTCAA+CGG - chr3_4:486429-486448 None:intergenic 20.0%
!! CTGAACAGTTTATATAATAA+AGG - chr3_4:487085-487104 None:intergenic 20.0%
!! ATTATATAAACTGTTCAGAT+AGG + chr3_4:487087-487106 Msa0483740:intron 20.0%
!!! CTATTTAGAGATATTTTTAC+CGG + chr3_4:487128-487147 Msa0483740:intron 20.0%
!!! AAATATTTGTTTTTACCAAC+CGG - chr3_4:487150-487169 None:intergenic 20.0%
!!! TCAAAAATCAATCTAGAATT+AGG - chr3_4:487223-487242 None:intergenic 20.0%
!! ATTTACTAAATAGTATATCG+CGG - chr3_4:487371-487390 None:intergenic 20.0%
!! AGTGAGATAATAAATTAGTT+TGG - chr3_4:488297-488316 None:intergenic 20.0%
!! TATTGGAGTCATTATAATAT+TGG + chr3_4:488349-488368 Msa0483740:intron 20.0%
!! AAAAAAAAAGGAAATGAAGA+GGG - chr3_4:488380-488399 None:intergenic 20.0%
!! AATTTAGTAACTTCTGTTAA+TGG - chr3_4:488779-488798 None:intergenic 20.0%
!! TATATTAAAATACAACAAGC+TGG - chr3_4:488868-488887 None:intergenic 20.0%
!! TCAGTTTATTAGATCTATTT+AGG + chr3_4:489138-489157 Msa0483740:intron 20.0%
!! TTTATCCTTGATACATTATT+AGG + chr3_4:489494-489513 Msa0483740:intron 20.0%
!!! CATTTTTTAAATACTACTTC+TGG + chr3_4:489843-489862 Msa0483740:intron 20.0%
!!! GTATTTTTAGCAAAATTTTG+GGG - chr3_4:490094-490113 None:intergenic 20.0%
!!! CGTATTTTTAGCAAAATTTT+GGG - chr3_4:490095-490114 None:intergenic 20.0%
!!! ACGTATTTTTAGCAAAATTT+TGG - chr3_4:490096-490115 None:intergenic 20.0%
!!! GCTTTGTTTTAATATCAAAT+AGG - chr3_4:491296-491315 None:intergenic 20.0%
!! TTCCTAATAGTTACTAATTA+TGG + chr3_4:491397-491416 Msa0483740:intron 20.0%
!! TTCCATAATTAGTAACTATT+AGG - chr3_4:491402-491421 None:intergenic 20.0%
!! AACTCGAAAATAGTTTATTT+CGG - chr3_4:491614-491633 None:intergenic 20.0%
!!! AAATAAACTATTTTCGAGTT+AGG + chr3_4:491614-491633 Msa0483740:intron 20.0%
!!! TTATTAAAAATAGTTGGTGA+GGG - chr3_4:492132-492151 None:intergenic 20.0%
!! AGAGAGTTATTAAAAATAGT+TGG - chr3_4:492138-492157 None:intergenic 20.0%
!! TTATTAATGTGTTAATTGTG+TGG + chr3_4:492197-492216 Msa0483740:intron 20.0%
!! AAAATGGAGAAAACAAAAAA+AGG - chr3_4:492727-492746 None:intergenic 20.0%
!!! ATTCAAAGCATTATGAAAAA+TGG + chr3_4:494042-494061 Msa0483740:CDS 20.0%
!! GTACAACATTTGATTATTTA+AGG - chr3_4:494304-494323 None:intergenic 20.0%
!! TTGTACATTTCAATTAAAGT+AGG + chr3_4:494318-494337 Msa0483740:intron 20.0%
!! GATCATCATTATAAAACATT+TGG - chr3_4:494459-494478 None:intergenic 20.0%
!! TTTAAAGAAGAAAACATAAG+AGG - chr3_4:494733-494752 None:intergenic 20.0%
!!! TCTTATGTTTTCTTCTTTAA+AGG + chr3_4:494732-494751 Msa0483740:CDS 20.0%
!! TCATTCATTGAAGTTTAAAA+TGG - chr3_4:495028-495047 None:intergenic 20.0%
!!! ATTTTAAACTTCAATGAATG+AGG + chr3_4:495027-495046 Msa0483740:intron 20.0%
!!! TCATATTTTTTTTTATGCTG+TGG + chr3_4:495192-495211 Msa0483740:intron 20.0%
!! ATCAAAAAAAATCATAGACA+CGG - chr3_4:495222-495241 None:intergenic 20.0%
!! TTAATTGTTTACTAATATCG+AGG + chr3_4:495532-495551 Msa0483740:intron 20.0%
!!! TTATGTGTAATTGATTTGAT+TGG + chr3_4:495661-495680 Msa0483740:intron 20.0%
!!! ATTTATTTTTTCTTCCGTTA+AGG + chr3_4:495850-495869 Msa0483740:intron 20.0%
!! CATTCATAATTAACTCAATT+AGG - chr3_4:497297-497316 None:intergenic 20.0%
!!! ATGTTAATTTTGTAGAGAAA+AGG - chr3_4:497673-497692 None:intergenic 20.0%
!!! TTTTTGTTCGTATTTTTTAG+CGG + chr3_4:497808-497827 Msa0483740:three_prime_UTR 20.0%
! TTAATTAATAGCCAATTTGG+GGG + chr3_4:486313-486332 Msa0483740:five_prime_UTR 25.0%
! AAGCATATTCTTATTCTTAG+CGG + chr3_4:486374-486393 Msa0483740:five_prime_UTR 25.0%
! TCTTTGAATTTCAATCGATT+TGG + chr3_4:486662-486681 Msa0483740:intron 25.0%
! CGGTAAAAATATCTCTAAAT+AGG - chr3_4:487130-487149 None:intergenic 25.0%
!!! TCTAGATTGATTTTTGAACA+CGG + chr3_4:487226-487245 Msa0483740:intron 25.0%
!!! GAATTTTAAGAATCCACTAT+CGG + chr3_4:487427-487446 Msa0483740:intron 25.0%
! TTGTACTAAATAGTGTATCA+TGG - chr3_4:487610-487629 None:intergenic 25.0%
! ATCAGTAACATTAATTACAC+CGG - chr3_4:487767-487786 None:intergenic 25.0%
!! AAACAAGAAGCATACTAAAT+AGG - chr3_4:487907-487926 None:intergenic 25.0%
! GATATAACTAAAAGAAGAGA+TGG - chr3_4:488247-488266 None:intergenic 25.0%
!!! TCTCTTCTTTTAGTTATATC+TGG + chr3_4:488247-488266 Msa0483740:intron 25.0%
! AAAAAAAAGGAAATGAAGAG+GGG - chr3_4:488379-488398 None:intergenic 25.0%
! GAAAAAAAAAGGAAATGAAG+AGG - chr3_4:488381-488400 None:intergenic 25.0%
!! TGTTCATTTCTGTGAAATTT+TGG - chr3_4:488603-488622 None:intergenic 25.0%
! TACTAAATTGAACTGTCATT+TGG + chr3_4:488790-488809 Msa0483740:intron 25.0%
! TTCTTAAAAACGTAACAGTT+TGG + chr3_4:489114-489133 Msa0483740:intron 25.0%
!! TTTTTAAATACTACTTCTGG+AGG + chr3_4:489846-489865 Msa0483740:intron 25.0%
! TCGAAAATTAGAGAAAGTAA+AGG + chr3_4:489985-490004 Msa0483740:intron 25.0%
! GTAAAAAAATCTGCAAATGA+AGG - chr3_4:490190-490209 None:intergenic 25.0%
! TTTCATGTTATGTTATGATC+TGG + chr3_4:490218-490237 Msa0483740:intron 25.0%
!!! ACTTTAACTTCTAAAGTAAC+AGG - chr3_4:490338-490357 None:intergenic 25.0%
!!! TTTTATTTTGCAAATCCAGT+AGG + chr3_4:490420-490439 Msa0483740:intron 25.0%
! TCACTTAAAAATTTCCTGTT+GGG - chr3_4:490814-490833 None:intergenic 25.0%
! ATCACTTAAAAATTTCCTGT+TGG - chr3_4:490815-490834 None:intergenic 25.0%
!!! TTGCTTGTTCTTCTATTTTT+AGG + chr3_4:490901-490920 Msa0483740:intron 25.0%
!! TTTAGGATTGATGAAATTGT+AGG + chr3_4:490918-490937 Msa0483740:intron 25.0%
! TTAGGATTGATGAAATTGTA+GGG + chr3_4:490919-490938 Msa0483740:intron 25.0%
! TATACCCAATAAGAACAAAA+CGG + chr3_4:491251-491270 Msa0483740:intron 25.0%
!!! TTATCCGTTTTGTTCTTATT+GGG - chr3_4:491258-491277 None:intergenic 25.0%
!!! ATTATCCGTTTTGTTCTTAT+TGG - chr3_4:491259-491278 None:intergenic 25.0%
! TGATCTTGGATGTTTATTTA+TGG + chr3_4:491578-491597 Msa0483740:intron 25.0%
! GATCTTGGATGTTTATTTAT+GGG + chr3_4:491579-491598 Msa0483740:intron 25.0%
! ACTCGAAAATAGTTTATTTC+GGG - chr3_4:491613-491632 None:intergenic 25.0%
!!! AGTTAATTTGTTTCTGTCTT+AGG + chr3_4:491825-491844 Msa0483740:intron 25.0%
!!! GTTAATTTGTTTCTGTCTTA+GGG + chr3_4:491826-491845 Msa0483740:intron 25.0%
!!! TTAATTTGTTTCTGTCTTAG+GGG + chr3_4:491827-491846 Msa0483740:intron 25.0%
! AAAATTGGGTTTCATAAAAG+TGG + chr3_4:492018-492037 Msa0483740:intron 25.0%
!! GTTATTAAAAATAGTTGGTG+AGG - chr3_4:492133-492152 None:intergenic 25.0%
! TGTGTGGAATTTATCAAATT+TGG + chr3_4:492213-492232 Msa0483740:intron 25.0%
! GTGTGGAATTTATCAAATTT+GGG + chr3_4:492214-492233 Msa0483740:intron 25.0%
!! AACTATAATAATGGAGGAAA+TGG - chr3_4:492503-492522 None:intergenic 25.0%
!! TTCCTCCATTATTATAGTTT+TGG + chr3_4:492504-492523 Msa0483740:intron 25.0%
! TTCCAAAACTATAATAATGG+AGG - chr3_4:492509-492528 None:intergenic 25.0%
!! TGAAGTTTGTAAATGTTTTG+GGG - chr3_4:492581-492600 None:intergenic 25.0%
!! CTGAAGTTTGTAAATGTTTT+GGG - chr3_4:492582-492601 None:intergenic 25.0%
!! ACTGAAGTTTGTAAATGTTT+TGG - chr3_4:492583-492602 None:intergenic 25.0%
! ACATTTACAAACTTCAGTAA+TGG + chr3_4:492585-492604 Msa0483740:intron 25.0%
!!! GCTCTGTTTTTTATTAACAT+TGG + chr3_4:492766-492785 Msa0483740:intron 25.0%
!!! CTGTTTTTTATTAACATTGG+TGG + chr3_4:492769-492788 Msa0483740:intron 25.0%
!!! TTTTATTAACATTGGTGGTT+TGG + chr3_4:492774-492793 Msa0483740:intron 25.0%
!! TTTATTAACATTGGTGGTTT+GGG + chr3_4:492775-492794 Msa0483740:intron 25.0%
!! TCCTTTTCTTTATCTATACT+GGG - chr3_4:492821-492840 None:intergenic 25.0%
!! ATCCTTTTCTTTATCTATAC+TGG - chr3_4:492822-492841 None:intergenic 25.0%
!! ATGTGTTTTCAAAGTGTAAT+TGG + chr3_4:492965-492984 Msa0483740:intron 25.0%
! AAATTGTGATTCTTAAGATC+AGG - chr3_4:493050-493069 None:intergenic 25.0%
!!! AATCACAATTTTGACAACAT+TGG + chr3_4:493059-493078 Msa0483740:intron 25.0%
! TATTTATGTCTATGCATATG+TGG + chr3_4:493151-493170 Msa0483740:intron 25.0%
! GAATCTTCAATAAGTTAACA+TGG - chr3_4:493603-493622 None:intergenic 25.0%
! ATGTCATTATATTTCTCTAG+TGG - chr3_4:493937-493956 None:intergenic 25.0%
!!! GTATGTGTTATTTTACTTTC+TGG + chr3_4:494090-494109 Msa0483740:intron 25.0%
!!! AGCTTTTTTTTAACAAAGCT+TGG + chr3_4:494135-494154 Msa0483740:intron 25.0%
!!! GAGAAAGTATCACAAAAATA+AGG - chr3_4:494354-494373 None:intergenic 25.0%
!! ACTTTTGCTTAACATTTGAA+TGG + chr3_4:494623-494642 Msa0483740:intron 25.0%
!! CTTTTGCTTAACATTTGAAT+GGG + chr3_4:494624-494643 Msa0483740:intron 25.0%
!!! TGTTTTCTTCTTTAAAGGTT+TGG + chr3_4:494737-494756 Msa0483740:intron 25.0%
!! TTACATTGTTTGTTGCTTAA+TGG + chr3_4:494802-494821 Msa0483740:intron 25.0%
! TCAAAAAAAATCATAGACAC+GGG - chr3_4:495221-495240 None:intergenic 25.0%
!! AAAAGCTGAAAGATTTTCTT+TGG - chr3_4:495421-495440 None:intergenic 25.0%
! TTATTTATACGCAATTAGGT+TGG - chr3_4:495512-495531 None:intergenic 25.0%
! GTAAAAAATTCATATGCAAC+AGG - chr3_4:495899-495918 None:intergenic 25.0%
!!! TGAATTCTTTTATTTAGCAG+TGG + chr3_4:496186-496205 Msa0483740:intron 25.0%
!! TAGGAAATCTTAAACTTTTC+AGG + chr3_4:496407-496426 Msa0483740:intron 25.0%
! TCTACAACTATAGGATTATT+TGG - chr3_4:496542-496561 None:intergenic 25.0%
!! TAGGAAATCTTAAACTTTTC+AGG + chr3_4:496407-496426 Msa0483740:intron 25.0%
! AAAATGGTATAGACAACAAT+AGG - chr3_4:496745-496764 None:intergenic 25.0%
!!! TTGTTGTCTATACCATTTTT+CGG + chr3_4:496746-496765 Msa0483740:intron 25.0%
! TCAAAGTTTGAAAAGGAATA+TGG + chr3_4:496937-496956 Msa0483740:intron 25.0%
!! TATCTTTACTTCTTTGAGAA+GGG + chr3_4:497238-497257 Msa0483740:CDS 25.0%
! TATACAGTTCCAAAAACAAA+AGG + chr3_4:497384-497403 Msa0483740:CDS 25.0%
! ATACAGTTCCAAAAACAAAA+GGG + chr3_4:497385-497404 Msa0483740:CDS 25.0%
! AAAAAGTTGATTCACTCGTA+AGG - chr3_4:486265-486284 None:intergenic 30.0%
AGAATAAGGTTAGGGTTTAA+CGG - chr3_4:486592-486611 None:intergenic 30.0%
AAGAAGAGAGAATAAGGTTA+GGG - chr3_4:486600-486619 None:intergenic 30.0%
GAAATGAAGAAGAGAGAATA+AGG - chr3_4:486606-486625 None:intergenic 30.0%
ACGAATCGGAAAATGAAAAT+CGG - chr3_4:486690-486709 None:intergenic 30.0%
ACAAATTCACAAGATGAAAG+TGG - chr3_4:486841-486860 None:intergenic 30.0%
AAGCTCGTAAAGATCAATAA+TGG - chr3_4:486997-487016 None:intergenic 30.0%
!! TTAGAGATATTTTTACCGGT+TGG + chr3_4:487132-487151 Msa0483740:intron 30.0%
! ACTAATTTTCACTGTTGTGT+CGG - chr3_4:487174-487193 None:intergenic 30.0%
AGAATTAGGAAAAACGTACT+CGG - chr3_4:487209-487228 None:intergenic 30.0%
! CAATCTAAAGCTAAGTGATT+AGG - chr3_4:487281-487300 None:intergenic 30.0%
! TATTTTGTCAACGTGAATGA+CGG + chr3_4:487507-487526 Msa0483740:intron 30.0%
TCAGTAACATTAATTACACC+GGG - chr3_4:487766-487785 None:intergenic 30.0%
AATTAATGTTACTGATGCCT+TGG + chr3_4:487771-487790 Msa0483740:intron 30.0%
! GCATATGTTATATGTCCTTT+TGG + chr3_4:487793-487812 Msa0483740:intron 30.0%
TTCTCCTCAAAAAATAGCAT+GGG - chr3_4:487829-487848 None:intergenic 30.0%
!!! ATGCTATTTTTTGAGGAGAA+GGG + chr3_4:487829-487848 Msa0483740:intron 30.0%
ATCTGTATACATCAAATCGA+AGG + chr3_4:487972-487991 Msa0483740:CDS 30.0%
TTATCTTTCTCAAGTTAGCA+AGG + chr3_4:488080-488099 Msa0483740:intron 30.0%
TGATCAACGTTGTAAACTAT+TGG + chr3_4:488332-488351 Msa0483740:intron 30.0%
! TCTACATTTGTCTTGATGAT+TGG + chr3_4:488463-488482 Msa0483740:intron 30.0%
! CTACATTTGTCTTGATGATT+GGG + chr3_4:488464-488483 Msa0483740:intron 30.0%
TTAAGATTGAACCTGATATG+TGG + chr3_4:488516-488535 Msa0483740:intron 30.0%
TCACAGAAATGAACAAACTT+TGG + chr3_4:488608-488627 Msa0483740:CDS 30.0%
CACAGAAATGAACAAACTTT+GGG + chr3_4:488609-488628 Msa0483740:CDS 30.0%
!!! TTTTTTCATGAACCATGAAC+AGG - chr3_4:488710-488729 None:intergenic 30.0%
! ATTGAACTGTCATTTGGTAA+TGG + chr3_4:488796-488815 Msa0483740:intron 30.0%
ATAATAGTTGCATGTCATGA+AGG + chr3_4:489227-489246 Msa0483740:intron 30.0%
TAATAGTTGCATGTCATGAA+GGG + chr3_4:489228-489247 Msa0483740:intron 30.0%
CATGATCAAATGCTTATAGA+AGG + chr3_4:489458-489477 Msa0483740:intron 30.0%
TCCTTGATACATTATTAGGT+TGG + chr3_4:489498-489517 Msa0483740:intron 30.0%
CCTTGATACATTATTAGGTT+GGG + chr3_4:489499-489518 Msa0483740:intron 30.0%
AGACATTTCCACTTTCTAAT+CGG + chr3_4:489649-489668 Msa0483740:intron 30.0%
TTCCGTATCCTCAATTATAT+TGG + chr3_4:489680-489699 Msa0483740:intron 30.0%
GTCCAATATAATTGAGGATA+CGG - chr3_4:489685-489704 None:intergenic 30.0%
TATCCTCAATTATATTGGAC+AGG + chr3_4:489685-489704 Msa0483740:intron 30.0%
! GAAAAAGCATACACGTATAA+AGG - chr3_4:489875-489894 None:intergenic 30.0%
! TGAATGAAATCTCACTGTTT+TGG - chr3_4:489903-489922 None:intergenic 30.0%
CAAATGAAGGTGACAAAATA+TGG - chr3_4:490177-490196 None:intergenic 30.0%
!! CTTTTAAGGACTATTGATGA+TGG + chr3_4:490255-490274 Msa0483740:intron 30.0%
TCCAAATTAAGCAATGCAAT+TGG + chr3_4:490597-490616 Msa0483740:CDS 30.0%
!! CTTTTTGATTCGATAGATCT+TGG + chr3_4:490629-490648 Msa0483740:intron 30.0%
! CTATATATGTTTTCAGTCCA+TGG - chr3_4:490664-490683 None:intergenic 30.0%
! ATGAATGCTTCATGACTTTT+AGG - chr3_4:490704-490723 None:intergenic 30.0%
! TAAAAGTCATGAAGCATTCA+TGG + chr3_4:490703-490722 Msa0483740:intron 30.0%
! AAAGTCTATCAATTAGTCTC+GGG - chr3_4:490761-490780 None:intergenic 30.0%
! GAAAGTCTATCAATTAGTCT+CGG - chr3_4:490762-490781 None:intergenic 30.0%
! GCAATGTTGTACTATTTCTT+TGG - chr3_4:490885-490904 None:intergenic 30.0%
TTGATCTCATATTGGACTTT+GGG - chr3_4:491053-491072 None:intergenic 30.0%
TTTGATCTCATATTGGACTT+TGG - chr3_4:491054-491073 None:intergenic 30.0%
TAATCCACATCTTTAGATGA+GGG - chr3_4:491172-491191 None:intergenic 30.0%
TTAATCCACATCTTTAGATG+AGG - chr3_4:491173-491192 None:intergenic 30.0%
! ACAGTTTTTACCGTATATGT+TGG + chr3_4:491213-491232 Msa0483740:intron 30.0%
GTGAGAAAATTATTCCTAAG+AGG + chr3_4:491446-491465 Msa0483740:intron 30.0%
TGAAATCTTAGCAAGATTGA+AGG + chr3_4:491517-491536 Msa0483740:intron 30.0%
GAAATCTTAGCAAGATTGAA+GGG + chr3_4:491518-491537 Msa0483740:intron 30.0%
GACCTTTAATGTATTTGAAC+CGG + chr3_4:491935-491954 Msa0483740:intron 30.0%
! ACCGATATATGTCTTATTGA+AGG + chr3_4:492330-492349 Msa0483740:intron 30.0%
GCCTTCAATAAGACATATAT+CGG - chr3_4:492334-492353 None:intergenic 30.0%
AAAGCATGACATTAAATGAG+TGG + chr3_4:492539-492558 Msa0483740:intron 30.0%
!! AAGTTTGTAAATGTTTTGGG+GGG - chr3_4:492579-492598 None:intergenic 30.0%
!! GAAGTTTGTAAATGTTTTGG+GGG - chr3_4:492580-492599 None:intergenic 30.0%
AATAAAGATGATCTTGACTC+TGG + chr3_4:492629-492648 Msa0483740:intron 30.0%
! GTTTTCAAAGTGTAATTGGT+TGG + chr3_4:492969-492988 Msa0483740:intron 30.0%
!! GTATTTTAAGCCCCATAAAA+TGG - chr3_4:493192-493211 None:intergenic 30.0%
GAATTCCTCAATTGTTATAC+AGG + chr3_4:493430-493449 Msa0483740:intron 30.0%
TATGACCTGTATAACAATTG+AGG - chr3_4:493438-493457 None:intergenic 30.0%
AATTGTTATACAGGTCATAG+AGG + chr3_4:493439-493458 Msa0483740:intron 30.0%
ACAAAGCTTGGTTTATTTGT+AGG + chr3_4:494147-494166 Msa0483740:intron 30.0%
AGCATTGTTTGAACTGATAA+AGG + chr3_4:494174-494193 Msa0483740:CDS 30.0%
GCATTGTTTGAACTGATAAA+GGG + chr3_4:494175-494194 Msa0483740:CDS 30.0%
CATTGTTTGAACTGATAAAG+GGG + chr3_4:494176-494195 Msa0483740:CDS 30.0%
GCATTGTAAAAAAATAGCTG+TGG - chr3_4:494250-494269 None:intergenic 30.0%
! TATTTAAGGTGCCATGTAAT+GGG - chr3_4:494290-494309 None:intergenic 30.0%
! TTATTTAAGGTGCCATGTAA+TGG - chr3_4:494291-494310 None:intergenic 30.0%
TAAAAGGGACAGGAAAAAAT+GGG - chr3_4:494385-494404 None:intergenic 30.0%
TCATCTTCATCCAACTAAAA+GGG - chr3_4:494400-494419 None:intergenic 30.0%
ATCATCTTCATCCAACTAAA+AGG - chr3_4:494401-494420 None:intergenic 30.0%
AAAGAAGAAAACATAAGAGG+TGG - chr3_4:494730-494749 None:intergenic 30.0%
! ACAGTGTAAAATAGAAGCAT+CGG - chr3_4:494781-494800 None:intergenic 30.0%
!! TAATGGTGAATTGATAATGC+TGG + chr3_4:494819-494838 Msa0483740:intron 30.0%
!!! ACGATACTAGTTTTGCATTT+TGG + chr3_4:494863-494882 Msa0483740:intron 30.0%
!! TTGGCTTAGTTTTTATCTTG+CGG + chr3_4:494882-494901 Msa0483740:intron 30.0%
!! TGCAAGCTTGATTTAATTTG+TGG + chr3_4:494986-495005 Msa0483740:intron 30.0%
AAGTTCATCTGAATGAGAAA+TGG - chr3_4:495138-495157 None:intergenic 30.0%
TGAGTCATATGATTGATGTT+AGG + chr3_4:495164-495183 Msa0483740:intron 30.0%
CAAAAAAAATCATAGACACG+GGG - chr3_4:495220-495239 None:intergenic 30.0%
! AGTCAAGAAGAAAATCCTTT+TGG + chr3_4:495376-495395 Msa0483740:CDS 30.0%
! AATCTTTCAGCTTTTGAATC+AGG + chr3_4:495426-495445 Msa0483740:CDS 30.0%
!! AGATTTGTTGGTACAATAAC+TGG + chr3_4:495561-495580 Msa0483740:intron 30.0%
GTTCTTTGTTAGTGATCAAT+CGG + chr3_4:495623-495642 Msa0483740:intron 30.0%
! ACAGCTATCCATTTGATAAT+AGG + chr3_4:496088-496107 Msa0483740:CDS 30.0%
GAAGAGTTCCTATTATCAAA+TGG - chr3_4:496099-496118 None:intergenic 30.0%
TGATAATAGGAACTCTTCAA+AGG + chr3_4:496101-496120 Msa0483740:CDS 30.0%
CTGAATACTATACGATGAAA+AGG - chr3_4:496259-496278 None:intergenic 30.0%
GATCATGATAACATGAAAGA+TGG + chr3_4:496346-496365 Msa0483740:CDS 30.0%
TTTCTATTGATATAGCGTCT+AGG + chr3_4:496388-496407 Msa0483740:intron 30.0%
TGTTCAACTAAAGAGAATCT+AGG - chr3_4:496483-496502 None:intergenic 30.0%
AATCCTATAGTTGTAGATAG+AGG + chr3_4:496545-496564 Msa0483740:intron 30.0%
AAACCTCTATCTACAACTAT+AGG - chr3_4:496551-496570 None:intergenic 30.0%
TTTCTATTGATATAGCGTCT+AGG + chr3_4:496388-496407 Msa0483740:intron 30.0%
TGTTCAACTAAAGAGAATCT+AGG - chr3_4:496483-496502 None:intergenic 30.0%
TAGACAACAATAGGATCATT+TGG - chr3_4:496736-496755 None:intergenic 30.0%
AGTATTTCCAACTTATGATC+AGG - chr3_4:496880-496899 None:intergenic 30.0%
! TGATCATAAGTTGGAAATAC+TGG + chr3_4:496879-496898 Msa0483740:intron 30.0%
! GATCATAAGTTGGAAATACT+GGG + chr3_4:496880-496899 Msa0483740:intron 30.0%
ATCTGTCTCAAAGTTTGAAA+AGG + chr3_4:496930-496949 Msa0483740:intron 30.0%
AACATCTATAATCCTAAGCT+AGG + chr3_4:497159-497178 Msa0483740:intron 30.0%
ACATCTATAATCCTAAGCTA+GGG + chr3_4:497160-497179 Msa0483740:intron 30.0%
TTTGCTTCTCAACAGTAAAT+TGG + chr3_4:497192-497211 Msa0483740:intron 30.0%
TCAACAGTAAATTGGAATGA+TGG + chr3_4:497200-497219 Msa0483740:intron 30.0%
! GTATCTTTACTTCTTTGAGA+AGG + chr3_4:497237-497256 Msa0483740:CDS 30.0%
TGAGAAATATGAACCAATCA+AGG + chr3_4:497420-497439 Msa0483740:CDS 30.0%
!! GTGTTTGTTATGTTACACTT+TGG + chr3_4:497470-497489 Msa0483740:three_prime_UTR 30.0%
ATATCATGAACACAAACTTG+TGG - chr3_4:497563-497582 None:intergenic 30.0%
! ATTATTCTAGTTGTGCACAA+AGG + chr3_4:497735-497754 Msa0483740:three_prime_UTR 30.0%
! CAAAGGTATACACAGATTTA+TGG + chr3_4:497752-497771 Msa0483740:three_prime_UTR 30.0%
GAATGAATTCTGTTGAAGTC+CGG - chr3_4:486542-486561 None:intergenic 35.0%
GAAGAAGAGAGAATAAGGTT+AGG - chr3_4:486601-486620 None:intergenic 35.0%
CAAAGTTCGTAGTATTTGTG+AGG - chr3_4:486793-486812 None:intergenic 35.0%
ATTTGATCAATTGAGGAAGC+TGG + chr3_4:486935-486954 Msa0483740:CDS 35.0%
! ATGCTATAGTAGCACTTTTG+CGG + chr3_4:487400-487419 Msa0483740:intron 35.0%
ATGACGGCGTTGTTAAATAA+CGG + chr3_4:487523-487542 Msa0483740:intron 35.0%
! GTGTTATCGAATATCGATTG+TGG - chr3_4:487702-487721 None:intergenic 35.0%
CAATCGATATTCGATAACAC+TGG + chr3_4:487702-487721 Msa0483740:intron 35.0%
AGGACATATAACATATGCCA+AGG - chr3_4:487791-487810 None:intergenic 35.0%
CTTCTCCTCAAAAAATAGCA+TGG - chr3_4:487830-487849 None:intergenic 35.0%
!!! CATGCTATTTTTTGAGGAGA+AGG + chr3_4:487828-487847 Msa0483740:intron 35.0%
AGTTAGCAAGGATAAATTGC+CGG + chr3_4:488092-488111 Msa0483740:intron 35.0%
AAGGATAAATTGCCGGATAT+TGG + chr3_4:488099-488118 Msa0483740:intron 35.0%
AAAGAAGAGATGGTCTGAAA+GGG - chr3_4:488237-488256 None:intergenic 35.0%
AAAAGAAGAGATGGTCTGAA+AGG - chr3_4:488238-488257 None:intergenic 35.0%
AAATGAACAAACTTTGGGTG+CGG + chr3_4:488614-488633 Msa0483740:CDS 35.0%
ATTGTTGATGCTCTCATGTT+TGG + chr3_4:488669-488688 Msa0483740:intron 35.0%
AGTAACTTCTGTTAATGGCT+TGG - chr3_4:488774-488793 None:intergenic 35.0%
!! ACTGTCATTTGGTAATGGTT+TGG + chr3_4:488801-488820 Msa0483740:intron 35.0%
!! CTGTCATTTGGTAATGGTTT+GGG + chr3_4:488802-488821 Msa0483740:intron 35.0%
! AAATACAACAAGCTGGTTCA+GGG - chr3_4:488861-488880 None:intergenic 35.0%
! AAAATACAACAAGCTGGTTC+AGG - chr3_4:488862-488881 None:intergenic 35.0%
!! ACTAAATCAGTTTGCTAGTG+TGG + chr3_4:488913-488932 Msa0483740:intron 35.0%
!! GCTTCACTTTAAGATCAGTT+TGG + chr3_4:489091-489110 Msa0483740:intron 35.0%
CTATTATGACGACATGCATA+AGG - chr3_4:489214-489233 None:intergenic 35.0%
CCCAACCTAATAATGTATCA+AGG - chr3_4:489502-489521 None:intergenic 35.0%
CAACATCTTTGTACATCTCA+AGG - chr3_4:489563-489582 None:intergenic 35.0%
CCATTTATCCGATTAGAAAG+TGG - chr3_4:489660-489679 None:intergenic 35.0%
CCACTTTCTAATCGGATAAA+TGG + chr3_4:489657-489676 Msa0483740:intron 35.0%
GCAATCCATCAAGTAGAATT+GGG - chr3_4:489735-489754 None:intergenic 35.0%
TGCAATCCATCAAGTAGAAT+TGG - chr3_4:489736-489755 None:intergenic 35.0%
TTTGCAAATGGTACTCATCA+GGG - chr3_4:489772-489791 None:intergenic 35.0%
TGAGATTTCATTCATCCAAG+AGG + chr3_4:489909-489928 Msa0483740:intron 35.0%
GAGATTTCATTCATCCAAGA+GGG + chr3_4:489910-489929 Msa0483740:intron 35.0%
! TCTTCAAGTTCTAACTGTAC+AGG - chr3_4:490054-490073 None:intergenic 35.0%
GTGACAAAATATGGTTATGC+TGG - chr3_4:490168-490187 None:intergenic 35.0%
TACTATCCCAGTTAATGGAA+AGG + chr3_4:490511-490530 Msa0483740:CDS 35.0%
TGAAAGCCTTTCCATTAACT+GGG - chr3_4:490520-490539 None:intergenic 35.0%
TTGAAAGCCTTTCCATTAAC+TGG - chr3_4:490521-490540 None:intergenic 35.0%
GCCAATTGCATTGCTTAATT+TGG - chr3_4:490601-490620 None:intergenic 35.0%
ATTAAGCAATGCAATTGGCA+AGG + chr3_4:490602-490621 Msa0483740:CDS 35.0%
GACTAATTGATAGACTTTCC+AGG + chr3_4:490763-490782 Msa0483740:intron 35.0%
CTATATTGAAGCCATACGTT+GGG - chr3_4:490973-490992 None:intergenic 35.0%
ATCCTTCTAGACGATTATGT+GGG + chr3_4:491016-491035 Msa0483740:intron 35.0%
! GATCAGCTTTGATCTCATAT+TGG - chr3_4:491061-491080 None:intergenic 35.0%
! CTGATCCTTGATTAGTTGTT+GGG + chr3_4:491075-491094 Msa0483740:intron 35.0%
!!! TACCGTATATGTTGGTTTTG+TGG + chr3_4:491221-491240 Msa0483740:intron 35.0%
CTCCACAAAACCAACATATA+CGG - chr3_4:491226-491245 None:intergenic 35.0%
! TTGTCTTTTTCTGTACAGCA+TGG + chr3_4:491663-491682 Msa0483740:intron 35.0%
! TGTCTTTTTCTGTACAGCAT+GGG + chr3_4:491664-491683 Msa0483740:intron 35.0%
!!! GACCATTTTTTTGCTTTCTC+TGG + chr3_4:491711-491730 Msa0483740:intron 35.0%
GACCAGAGAAAGCAAAAAAA+TGG - chr3_4:491716-491735 None:intergenic 35.0%
! GAGATGATAATGTCAATTGC+TGG + chr3_4:491758-491777 Msa0483740:intron 35.0%
TATTTGAACCGGCCAAAATT+CGG + chr3_4:491946-491965 Msa0483740:intron 35.0%
! AAACCCAATTTTCTGTGAAC+CGG - chr3_4:492010-492029 None:intergenic 35.0%
! TCAGTAATGGAGAGAATGAA+TGG + chr3_4:492598-492617 Msa0483740:intron 35.0%
CTAATCAGTGTTTCAAAACC+GGG - chr3_4:492668-492687 None:intergenic 35.0%
CCTAATCAGTGTTTCAAAAC+CGG - chr3_4:492669-492688 None:intergenic 35.0%
!!! CGGTTTTGAAACACTGATTA+GGG + chr3_4:492667-492686 Msa0483740:intron 35.0%
!!! GGTTTTGAAACACTGATTAG+GGG + chr3_4:492668-492687 Msa0483740:intron 35.0%
GCCCAGTATAGATAAAGAAA+AGG + chr3_4:492817-492836 Msa0483740:intron 35.0%
CAAAGTGTAATTGGTTGGAT+AGG + chr3_4:492974-492993 Msa0483740:intron 35.0%
TGATTCTTAAGATCAGGAGA+GGG - chr3_4:493044-493063 None:intergenic 35.0%
! TCTATGCATATGTGGATTGT+GGG + chr3_4:493159-493178 Msa0483740:intron 35.0%
! TGGGTGGTATTCCATTTTAT+GGG + chr3_4:493178-493197 Msa0483740:intron 35.0%
AAACAGAGCACAAAAGAAAG+AGG - chr3_4:493235-493254 None:intergenic 35.0%
ATCAGCATAATCTAGTCGAT+CGG - chr3_4:493540-493559 None:intergenic 35.0%
AGATTATGCTGATCAAGTCT+TGG + chr3_4:493547-493566 Msa0483740:CDS 35.0%
! CTGACTGTGTATACTTGTTA+GGG + chr3_4:493829-493848 Msa0483740:intron 35.0%
AGGTAAAATTGAGGACAAGA+AGG + chr3_4:493879-493898 Msa0483740:CDS 35.0%
AATAACACATACCTTGTCAG+AGG - chr3_4:494082-494101 None:intergenic 35.0%
ATGGGAGAAGTCAAAACAAT+AGG - chr3_4:494272-494291 None:intergenic 35.0%
!!! TTTTGACTTCTCCCATTACA+TGG + chr3_4:494276-494295 Msa0483740:intron 35.0%
CTAAAAGGGACAGGAAAAAA+TGG - chr3_4:494386-494405 None:intergenic 35.0%
! TTTTTCCTGTCCCTTTTAGT+TGG + chr3_4:494387-494406 Msa0483740:intron 35.0%
GGATGAAGATGATTTCAAAG+AGG + chr3_4:494408-494427 Msa0483740:CDS 35.0%
TGATCCAGAAGAGATGTTTA+AGG + chr3_4:494474-494493 Msa0483740:CDS 35.0%
!! AAGCATCGGACTAATCAAAA+TGG - chr3_4:494767-494786 None:intergenic 35.0%
TGTACTTTACTGTCTACAGT+TGG + chr3_4:495327-495346 Msa0483740:intron 35.0%
TATGCTTGTATAAAGAACGC+CGG + chr3_4:495452-495471 Msa0483740:intron 35.0%
TCGAGGATTTGAAGATTTGT+TGG + chr3_4:495549-495568 Msa0483740:intron 35.0%
TTGTTGGTACAATAACTGGT+AGG + chr3_4:495565-495584 Msa0483740:intron 35.0%
!! CTGAGGTACTGGAATATATT+TGG + chr3_4:495786-495805 Msa0483740:intron 35.0%
TGGAATTTGTAGGGGTTATA+TGG - chr3_4:495966-495985 None:intergenic 35.0%
! AAAAGAGGATTTTGTGTGTG+AGG - chr3_4:495989-496008 None:intergenic 35.0%
! CACATTTGTGTTGTTATACC+AGG + chr3_4:496048-496067 Msa0483740:intron 35.0%
TATGCTTGCTCACATTTGTT+TGG + chr3_4:496317-496336 Msa0483740:CDS 35.0%
ATGCTTGCTCACATTTGTTT+GGG + chr3_4:496318-496337 Msa0483740:CDS 35.0%
ATAACATGAAAGATGGAGAG+AGG + chr3_4:496353-496372 Msa0483740:CDS 35.0%
CTTACAAACAGAGCAATTCA+AGG - chr3_4:496444-496463 None:intergenic 35.0%
CTTTAGTTGTTGCCGAAAAA+TGG - chr3_4:496761-496780 None:intergenic 35.0%
TTCACTACTTCACTTTCATG+AGG - chr3_4:496833-496852 None:intergenic 35.0%
! CAACTTATGATCAGGTTTTG+TGG - chr3_4:496872-496891 None:intergenic 35.0%
CACAAAACCTGATCATAAGT+TGG + chr3_4:496870-496889 Msa0483740:intron 35.0%
TGGGCAAGAAAAAAGAAAGA+AGG + chr3_4:496899-496918 Msa0483740:intron 35.0%
GGGCAAGAAAAAAGAAAGAA+GGG + chr3_4:496900-496919 Msa0483740:intron 35.0%
!! AATGAAGAGCATTACTGATC+CGG - chr3_4:497117-497136 None:intergenic 35.0%
AAGAAAAACAACCCTAGCTT+AGG - chr3_4:497174-497193 None:intergenic 35.0%
!! AATGATGGTGTGTTTTTGCA+AGG + chr3_4:497215-497234 Msa0483740:intron 35.0%
TAATTAACTCAATTAGGCCC+TGG - chr3_4:497291-497310 None:intergenic 35.0%
! CTGCTTTGAATTGTCTTCTT+TGG + chr3_4:497522-497541 Msa0483740:three_prime_UTR 35.0%
AACACAAACTTGTGGTTTCA+CGG - chr3_4:497555-497574 None:intergenic 35.0%
CAGCAAAAACATGTTCAGTT+TGG + chr3_4:497590-497609 Msa0483740:three_prime_UTR 35.0%
GCAAAACGGGAGAAATTAAG+AGG + chr3_4:486345-486364 Msa0483740:five_prime_UTR 40.0%
GAGGAACTTCTCTTCATCTT+CGG - chr3_4:486506-486525 None:intergenic 40.0%
ATAAGGTTAGGGTTTAACGG+AGG - chr3_4:486589-486608 None:intergenic 40.0%
!! TTCATTTTCCGATTCGTTGC+AGG + chr3_4:486693-486712 Msa0483740:intron 40.0%
CTCTACAGCATAGCAGAATT+CGG + chr3_4:487329-487348 Msa0483740:intron 40.0%
AGTATATCGCGGAACAATAG+TGG - chr3_4:487360-487379 None:intergenic 40.0%
CAATCCAATGTTGTCAATCG+CGG - chr3_4:487486-487505 None:intergenic 40.0%
TCCATAGTGATGTTGCATAG+CGG + chr3_4:487561-487580 Msa0483740:intron 40.0%
TTGTGGATCACAGGAAATAG+CGG - chr3_4:487685-487704 None:intergenic 40.0%
! GAATATCGATTGTGGATCAC+AGG - chr3_4:487694-487713 None:intergenic 40.0%
TATTCGATAACACTGGTGCA+TGG + chr3_4:487709-487728 Msa0483740:intron 40.0%
ATGGGAGCTTCATAACCAAA+AGG - chr3_4:487811-487830 None:intergenic 40.0%
!!! AGCTCCCATGCTATTTTTTG+AGG + chr3_4:487822-487841 Msa0483740:intron 40.0%
ATACAGATCCTACTGTACAG+AGG - chr3_4:487960-487979 None:intergenic 40.0%
TCCTGCTAAGGATGTTCTTA+AGG + chr3_4:487999-488018 Msa0483740:CDS 40.0%
TCCTTAAGAACATCCTTAGC+AGG - chr3_4:488003-488022 None:intergenic 40.0%
TCGTACTCAGAACCAATATC+CGG - chr3_4:488114-488133 None:intergenic 40.0%
!! GATATTGGTTCTGAGTACGA+GGG + chr3_4:488114-488133 Msa0483740:intron 40.0%
!! ATATTGGTTCTGAGTACGAG+GGG + chr3_4:488115-488134 Msa0483740:intron 40.0%
TTATCCTCCACTTCTGTTTG+TGG + chr3_4:488162-488181 Msa0483740:intron 40.0%
CAAGAAACCACAAACAGAAG+TGG - chr3_4:488172-488191 None:intergenic 40.0%
AGTTTGGATGTCTTCAGATC+CGG - chr3_4:488281-488300 None:intergenic 40.0%
CAGTGTTTGAATTGCAGAGA+CGG - chr3_4:488438-488457 None:intergenic 40.0%
AGAGTAGACATCCACATATC+AGG - chr3_4:488530-488549 None:intergenic 40.0%
ATGTCTACTCTGACAACTGT+AGG + chr3_4:488539-488558 Msa0483740:intron 40.0%
TGTCTACTCTGACAACTGTA+GGG + chr3_4:488540-488559 Msa0483740:intron 40.0%
GTGCAGTTTACAGTTCAGTT+TGG - chr3_4:488733-488752 None:intergenic 40.0%
ACACTCTTAGGAATCCAGTT+TGG + chr3_4:488831-488850 Msa0483740:intron 40.0%
ATCTACCTTGTCTTTGCTGA+AGG + chr3_4:488968-488987 Msa0483740:intron 40.0%
CATCACTTTATGGTTGGGTT+TGG + chr3_4:489046-489065 Msa0483740:intron 40.0%
GAGTTCAGCTTAGTTCAGTT+TGG + chr3_4:489160-489179 Msa0483740:intron 40.0%
TATGACGACATGCATAAGGT+TGG - chr3_4:489210-489229 None:intergenic 40.0%
TAGTGAAGCAAACCAGTTAC+AGG - chr3_4:489423-489442 None:intergenic 40.0%
!! ACTGGTTTGCTTCACTATGA+TGG + chr3_4:489426-489445 Msa0483740:intron 40.0%
TCATGTTCTCAGTCAGATAG+AGG + chr3_4:489530-489549 Msa0483740:CDS 40.0%
CATGTTCTCAGTCAGATAGA+GGG + chr3_4:489531-489550 Msa0483740:CDS 40.0%
TTTACCTGCTCAAGTACTCT+AGG - chr3_4:489591-489610 None:intergenic 40.0%
CGACCTGTCCAATATAATTG+AGG - chr3_4:489691-489710 None:intergenic 40.0%
CGTGAATTGCAAAGATGAGT+TGG + chr3_4:489709-489728 Msa0483740:CDS 40.0%
GTTTGCAAATGGTACTCATC+AGG - chr3_4:489773-489792 None:intergenic 40.0%
GCACATCAAGAGTTTGCAAA+TGG - chr3_4:489784-489803 None:intergenic 40.0%
! CAAACTCTTGATGTGCTGTT+GGG + chr3_4:489788-489807 Msa0483740:CDS 40.0%
! TTACCCTCAACTTCAGGTTA+GGG + chr3_4:489814-489833 Msa0483740:intron 40.0%
TTTGTTCTTCAGAACCCTCT+TGG - chr3_4:489927-489946 None:intergenic 40.0%
TGCATTCTTTGACTGCTAGT+TGG + chr3_4:490310-490329 Msa0483740:intron 40.0%
TTTACTAGCAGTCAACTAGC+AGG - chr3_4:490363-490382 None:intergenic 40.0%
TGCTAGTTGACTGCTAGTAA+AGG + chr3_4:490362-490381 Msa0483740:intron 40.0%
AACTGAGTGACAATACCTAC+TGG - chr3_4:490438-490457 None:intergenic 40.0%
GACAGTACTATCCCAGTTAA+TGG + chr3_4:490506-490525 Msa0483740:CDS 40.0%
! CAAGTTGACTATGTACTTCC+TGG - chr3_4:490784-490803 None:intergenic 40.0%
! CAACTTGTTTACTTCCCAAC+AGG + chr3_4:490797-490816 Msa0483740:intron 40.0%
GCTATATTGAAGCCATACGT+TGG - chr3_4:490974-490993 None:intergenic 40.0%
CATAATCGTCTAGAAGGATG+AGG - chr3_4:491015-491034 None:intergenic 40.0%
CATCCTTCTAGACGATTATG+TGG + chr3_4:491015-491034 Msa0483740:intron 40.0%
TCCTTCTAGACGATTATGTG+GGG + chr3_4:491017-491036 Msa0483740:intron 40.0%
! GCTGATCCTTGATTAGTTGT+TGG + chr3_4:491074-491093 Msa0483740:intron 40.0%
ATCTTTAGATGAGGGACTTG+AGG - chr3_4:491164-491183 None:intergenic 40.0%
AAGTCCCTCATCTAAAGATG+TGG + chr3_4:491165-491184 Msa0483740:intron 40.0%
TCCTAAGAGGTCATGTATCA+AGG + chr3_4:491459-491478 Msa0483740:intron 40.0%
ACCTTGATACATGACCTCTT+AGG - chr3_4:491463-491482 None:intergenic 40.0%
! AGCACGATTTTGTGTGATCT+TGG + chr3_4:491564-491583 Msa0483740:intron 40.0%
AAAAGACAACCGCACAAAGA+TGG - chr3_4:491652-491671 None:intergenic 40.0%
! GGCCGGTTCAAATACATTAA+AGG - chr3_4:491940-491959 None:intergenic 40.0%
TTGTCCGGTTCACAGAAAAT+TGG + chr3_4:492003-492022 Msa0483740:intron 40.0%
TGTCCGGTTCACAGAAAATT+GGG + chr3_4:492004-492023 Msa0483740:intron 40.0%
GTGTCACAAATTGACGCATT+TGG - chr3_4:492368-492387 None:intergenic 40.0%
! GGAGAGCATAGAAAATAGAG+AGG - chr3_4:492482-492501 None:intergenic 40.0%
!!! CCGGTTTTGAAACACTGATT+AGG + chr3_4:492666-492685 Msa0483740:intron 40.0%
! GAAACACTGATTAGGGGTAT+TGG + chr3_4:492674-492693 Msa0483740:intron 40.0%
!! ACTGATTAGGGGTATTGGTT+TGG + chr3_4:492679-492698 Msa0483740:intron 40.0%
!! CTGATTAGGGGTATTGGTTT+GGG + chr3_4:492680-492699 Msa0483740:intron 40.0%
TTATCTATACTGGGCCTTCA+TGG - chr3_4:492812-492831 None:intergenic 40.0%
GTGATTCTTAAGATCAGGAG+AGG - chr3_4:493045-493064 None:intergenic 40.0%
! GTCTATGCATATGTGGATTG+TGG + chr3_4:493158-493177 Msa0483740:intron 40.0%
! GTGGGTGGTATTCCATTTTA+TGG + chr3_4:493177-493196 Msa0483740:intron 40.0%
! GGGTGGTATTCCATTTTATG+GGG + chr3_4:493179-493198 Msa0483740:intron 40.0%
AAAGTTACAACTCCAGCAGT+GGG - chr3_4:493479-493498 None:intergenic 40.0%
TAAAGTTACAACTCCAGCAG+TGG - chr3_4:493480-493499 None:intergenic 40.0%
TCAGCATAATCTAGTCGATC+GGG - chr3_4:493539-493558 None:intergenic 40.0%
TAAGGAAGCAGACTTACTCT+TGG + chr3_4:493788-493807 Msa0483740:intron 40.0%
!! ACACAGTCAGGCATTGTTTT+TGG - chr3_4:493819-493838 None:intergenic 40.0%
CCTAACAAGTATACACAGTC+AGG - chr3_4:493831-493850 None:intergenic 40.0%
CCTGACTGTGTATACTTGTT+AGG + chr3_4:493828-493847 Msa0483740:intron 40.0%
GCATGTGTGAAAAATCTCTC+TGG + chr3_4:493853-493872 Msa0483740:CDS 40.0%
GTGAAAAATCTCTCTGGCAA+AGG + chr3_4:493859-493878 Msa0483740:CDS 40.0%
CTCTGGCAAAGGTAAAATTG+AGG + chr3_4:493870-493889 Msa0483740:CDS 40.0%
AGGGTAGTTTGAAAGCTTCA+AGG - chr3_4:493968-493987 None:intergenic 40.0%
TTCAAACTACCCTCGTGTAA+TGG + chr3_4:493975-493994 Msa0483740:CDS 40.0%
CAAGGAATTCCATTACACGA+GGG - chr3_4:493987-494006 None:intergenic 40.0%
TCAAGGAATTCCATTACACG+AGG - chr3_4:493988-494007 None:intergenic 40.0%
CCTTATTAGTTGGAACGTCA+AGG - chr3_4:494005-494024 None:intergenic 40.0%
CCTTGACGTTCCAACTAATA+AGG + chr3_4:494002-494021 Msa0483740:CDS 40.0%
CGTTCCAACTAATAAGGTCA+TGG + chr3_4:494008-494027 Msa0483740:CDS 40.0%
GTTGCCATGACCTTATTAGT+TGG - chr3_4:494015-494034 None:intergenic 40.0%
ACTGATAAAGGGGCTTATCA+AGG + chr3_4:494186-494205 Msa0483740:CDS 40.0%
ACTGAAATGACCTCTTCATC+AGG - chr3_4:494226-494245 None:intergenic 40.0%
TTCATCCAACTAAAAGGGAC+AGG - chr3_4:494395-494414 None:intergenic 40.0%
CTCACCTTAAACATCTCTTC+TGG - chr3_4:494481-494500 None:intergenic 40.0%
! GAGATGTTTAAGGTGAGTTG+TGG + chr3_4:494484-494503 Msa0483740:intron 40.0%
TCATAGTTTACGCCCTATTC+AGG + chr3_4:494568-494587 Msa0483740:intron 40.0%
CATAGTTTACGCCCTATTCA+GGG + chr3_4:494569-494588 Msa0483740:intron 40.0%
TGCAGATCATTGAAACTGTG+AGG + chr3_4:494659-494678 Msa0483740:intron 40.0%
ATAAGAGGTGGAACAGTGAA+AGG - chr3_4:494718-494737 None:intergenic 40.0%
!! TGGTGAATTGATAATGCTGG+CGG + chr3_4:494822-494841 Msa0483740:intron 40.0%
ACTTCAATGAATGAGGCAAC+TGG + chr3_4:495034-495053 Msa0483740:intron 40.0%
CTTCAATGAATGAGGCAACT+GGG + chr3_4:495035-495054 Msa0483740:intron 40.0%
! TGTTTCTATTTCCAGCTGAC+AGG + chr3_4:495096-495115 Msa0483740:intron 40.0%
CTGTAGAAAAAGACAAGCAG+CGG - chr3_4:495272-495291 None:intergenic 40.0%
TTTACTGTCTACAGTTGGTC+AGG + chr3_4:495332-495351 Msa0483740:intron 40.0%
GTTGATGCATCATCTCCAAA+AGG - chr3_4:495394-495413 None:intergenic 40.0%
ACAGTCATTTGCAGCCTTAA+CGG - chr3_4:495867-495886 None:intergenic 40.0%
TGTGTGAGGTGGAATTTGTA+GGG - chr3_4:495975-495994 None:intergenic 40.0%
CTTCAAAGGATGCATGTCTT+CGG + chr3_4:496115-496134 Msa0483740:CDS 40.0%
CAGGGATACTTTAACTCACA+AGG + chr3_4:496147-496166 Msa0483740:CDS 40.0%
GAATTCAATAATCACCCCTG+TGG - chr3_4:496173-496192 None:intergenic 40.0%
CTCACAAACAGAGCAATTCA+AGG - chr3_4:496636-496655 None:intergenic 40.0%
CTTGAATTGCTCTGTTTGTG+AGG + chr3_4:496634-496653 Msa0483740:intron 40.0%
CTTAAGGCATAATAGGACTC+TGG - chr3_4:497036-497055 None:intergenic 40.0%
GAGTCCTATTATGCCTTAAG+CGG + chr3_4:497036-497055 Msa0483740:intron 40.0%
AGTCCTATTATGCCTTAAGC+GGG + chr3_4:497037-497056 Msa0483740:CDS 40.0%
TGCAAATGCTGCACAACAAA+TGG + chr3_4:497070-497089 Msa0483740:CDS 40.0%
! TAGCAGCAACTGTAACTTGT+GGG - chr3_4:497267-497286 None:intergenic 40.0%
ATAGCAGCAACTGTAACTTG+TGG - chr3_4:497268-497287 None:intergenic 40.0%
CTGTATATAGCGCATAGTAG+TGG - chr3_4:497371-497390 None:intergenic 40.0%
CAGTTCCAAAAACAAAAGGG+TGG + chr3_4:497388-497407 Msa0483740:CDS 40.0%
!!! CTGTACCACCCTTTTGTTTT+TGG - chr3_4:497396-497415 None:intergenic 40.0%
AAACAAAAGGGTGGTACAGT+TGG + chr3_4:497397-497416 Msa0483740:CDS 40.0%
ACCAATCAAGGTTTGACATG+TGG + chr3_4:497432-497451 Msa0483740:exon 40.0%
TCCACATGTCAAACCTTGAT+TGG - chr3_4:497436-497455 None:intergenic 40.0%
GGATCATCACATGAGCAAAT+TGG - chr3_4:497497-497516 None:intergenic 40.0%
AGACAATTCAAAGCAGTTGC+TGG - chr3_4:497518-497537 None:intergenic 40.0%
!!! GCTGTTTTTGACCCCCAAAT+TGG - chr3_4:486327-486346 None:intergenic 45.0%
GGGGGTCAAAAACAGCAAAA+CGG + chr3_4:486331-486350 Msa0483740:five_prime_UTR 45.0%
GGGGTCAAAAACAGCAAAAC+GGG + chr3_4:486332-486351 Msa0483740:five_prime_UTR 45.0%
ATCGAAGTTGAGAACTTCGC+CGG + chr3_4:486459-486478 Msa0483740:five_prime_UTR 45.0%
ATTCTACATGCACCGTGCAT+TGG + chr3_4:486558-486577 Msa0483740:CDS 45.0%
GTTCGAATCCTGCAACGAAT+CGG - chr3_4:486704-486723 None:intergenic 45.0%
TGCGCGCATTTGATCAATTG+AGG + chr3_4:486928-486947 Msa0483740:CDS 45.0%
! CATTTTGCCGCGATTGTAAG+TGG + chr3_4:487034-487053 Msa0483740:intron 45.0%
CGAATTCTGCTATGCTGTAG+AGG - chr3_4:487331-487350 None:intergenic 45.0%
! ATAGTAGCACTTTTGCGGAG+CGG + chr3_4:487405-487424 Msa0483740:intron 45.0%
ATGTTGTCAATCGCCGATAG+TGG - chr3_4:487443-487462 None:intergenic 45.0%
CTATCGGCGATTGACAACAT+TGG + chr3_4:487443-487462 Msa0483740:intron 45.0%
CCATAGTGATGTTGCATAGC+GGG + chr3_4:487562-487581 Msa0483740:intron 45.0%
ACTTGCTCAGAAACTGATCC+CGG + chr3_4:487745-487764 Msa0483740:intron 45.0%
AGGTATCTCCTCTGTACAGT+AGG + chr3_4:487949-487968 Msa0483740:intron 45.0%
GATCTTGTAGAGATGTGTCG+TGG + chr3_4:488021-488040 Msa0483740:intron 45.0%
!! GGATATTGGTTCTGAGTACG+AGG + chr3_4:488113-488132 Msa0483740:intron 45.0%
GAAACCACAAACAGAAGTGG+AGG - chr3_4:488169-488188 None:intergenic 45.0%
TGCATGTCTAGTCCTGTTCA+TGG + chr3_4:488695-488714 Msa0483740:intron 45.0%
TTTGGGAACTGCACACTCTT+AGG + chr3_4:488819-488838 Msa0483740:intron 45.0%
CAGTTCGCTGCATCACTTTA+TGG + chr3_4:489036-489055 Msa0483740:intron 45.0%
TCGCTGCATCACTTTATGGT+TGG + chr3_4:489040-489059 Msa0483740:intron 45.0%
CGCTGCATCACTTTATGGTT+GGG + chr3_4:489041-489060 Msa0483740:intron 45.0%
! GCATAAGGTTGGTCATGGTT+TGG - chr3_4:489199-489218 None:intergenic 45.0%
! GACATGCATAAGGTTGGTCA+TGG - chr3_4:489204-489223 None:intergenic 45.0%
! GTCATGAAGGGCATGATTTC+TGG + chr3_4:489240-489259 Msa0483740:intron 45.0%
TTTCTCGTTTCTCCTTCTCC+CGG - chr3_4:489361-489380 None:intergenic 45.0%
GGAGAAGGAGAAACGAGAAA+AGG + chr3_4:489361-489380 Msa0483740:CDS 45.0%
AGGAGAAACGAGAAAAGGAG+AGG + chr3_4:489366-489385 Msa0483740:CDS 45.0%
TAATACCCGAAGCCTGTAAC+TGG + chr3_4:489408-489427 Msa0483740:intron 45.0%
AGCAAACCAGTTACAGGCTT+CGG - chr3_4:489417-489436 None:intergenic 45.0%
GTTGGCCCAATTCTACTTGA+TGG + chr3_4:489727-489746 Msa0483740:CDS 45.0%
GCAAACTCTTGATGTGCTGT+TGG + chr3_4:489787-489806 Msa0483740:CDS 45.0%
! CTTACCCTCAACTTCAGGTT+AGG + chr3_4:489813-489832 Msa0483740:intron 45.0%
GTTCCCTAACCTGAAGTTGA+GGG - chr3_4:489820-489839 None:intergenic 45.0%
AGTTCCCTAACCTGAAGTTG+AGG - chr3_4:489821-489840 None:intergenic 45.0%
!! ATTTTGGGGATGCCAAATGC+AGG - chr3_4:490080-490099 None:intergenic 45.0%
GTCTATCCATATCCCACAGA+TGG + chr3_4:490139-490158 Msa0483740:intron 45.0%
!! TTATGCTGGCTTCCATCTGT+GGG - chr3_4:490154-490173 None:intergenic 45.0%
! TTATGCTGCTTCAAGTGCAG+AGG + chr3_4:490542-490561 Msa0483740:CDS 45.0%
TGCTTCCACCTGCAAAAACT+CGG - chr3_4:490574-490593 None:intergenic 45.0%
GATCTTGGAAACTACAGCCA+TGG + chr3_4:490644-490663 Msa0483740:intron 45.0%
CTAGAGAAAAGCCCAACGTA+TGG + chr3_4:490959-490978 Msa0483740:intron 45.0%
ACCCCACATAATCGTCTAGA+AGG - chr3_4:491021-491040 None:intergenic 45.0%
!! ATCGTGCTATTTCACGATCC+AGG - chr3_4:491552-491571 None:intergenic 45.0%
TCTATGCAGCCATCTTTGTG+CGG + chr3_4:491640-491659 Msa0483740:intron 45.0%
TCGCAATGCCTTCGAAGAAT+GGG + chr3_4:491734-491753 Msa0483740:intron 45.0%
TCAATTGCTGGTGCAGCTAA+TGG + chr3_4:491770-491789 Msa0483740:intron 45.0%
TGCAGCTAATGGAATCTGCT+AGG + chr3_4:491781-491800 Msa0483740:intron 45.0%
!!! AGGGGCAGTGTTTTAAAACC+CGG + chr3_4:491845-491864 Msa0483740:intron 45.0%
TCTAATGCCCTGACCAAATC+GGG - chr3_4:491917-491936 None:intergenic 45.0%
GTCTAATGCCCTGACCAAAT+CGG - chr3_4:491918-491937 None:intergenic 45.0%
GTGAACCGGTAAGAATTGTC+CGG + chr3_4:491988-492007 Msa0483740:intron 45.0%
GTGAACCGGACAATTCTTAC+CGG - chr3_4:491996-492015 None:intergenic 45.0%
TACGTGAAACTCAGTGCATG+CGG - chr3_4:492060-492079 None:intergenic 45.0%
AATTGACGCATTTGGACACC+AGG - chr3_4:492360-492379 None:intergenic 45.0%
CGCTGATATCGGCAGTAATT+TGG - chr3_4:492425-492444 None:intergenic 45.0%
AGTGTTTCAAAACCGGGTCA+AGG - chr3_4:492662-492681 None:intergenic 45.0%
! ATGCATATGTGGATTGTGGG+TGG + chr3_4:493162-493181 Msa0483740:intron 45.0%
CAGCATAATCTAGTCGATCG+GGG - chr3_4:493538-493557 None:intergenic 45.0%
ACGCATTTCTACCTCTGACA+AGG + chr3_4:494068-494087 Msa0483740:CDS 45.0%
TCTGGTCTAACCTCTACGTT+TGG + chr3_4:494108-494127 Msa0483740:intron 45.0%
AAAGCTCACACCAAACGTAG+AGG - chr3_4:494121-494140 None:intergenic 45.0%
GGGCTTATCAAGGATTCTGA+CGG + chr3_4:494196-494215 Msa0483740:CDS 45.0%
GGCTTATCAAGGATTCTGAC+GGG + chr3_4:494197-494216 Msa0483740:CDS 45.0%
CACAACTGCAATGCTAACTC+TGG - chr3_4:495755-495774 None:intergenic 45.0%
GTGTGAGGTGGAATTTGTAG+GGG - chr3_4:495974-495993 None:intergenic 45.0%
GTGTGTGAGGTGGAATTTGT+AGG - chr3_4:495976-495995 None:intergenic 45.0%
! AGAGGATTTTGTGTGTGAGG+TGG - chr3_4:495986-496005 None:intergenic 45.0%
!! ATGTCTTCGGTGTTGAGAAC+AGG + chr3_4:496128-496147 Msa0483740:CDS 45.0%
!! TGTCTTCGGTGTTGAGAACA+GGG + chr3_4:496129-496148 Msa0483740:CDS 45.0%
ACTTTAACTCACAAGGCCAC+AGG + chr3_4:496154-496173 Msa0483740:CDS 45.0%
CTTTAACTCACAAGGCCACA+GGG + chr3_4:496155-496174 Msa0483740:CDS 45.0%
TTTAACTCACAAGGCCACAG+GGG + chr3_4:496156-496175 Msa0483740:CDS 45.0%
! TACACAGCTCTGCATTGATC+TGG - chr3_4:496299-496318 None:intergenic 45.0%
TTTCATGAGGATAGCAGCGT+TGG - chr3_4:496820-496839 None:intergenic 45.0%
AAGCCCGCTTAAGGCATAAT+AGG - chr3_4:497043-497062 None:intergenic 45.0%
! TATGCCTTAAGCGGGCTTTA+AGG + chr3_4:497045-497064 Msa0483740:CDS 45.0%
CAATCCTTAAAGCCCGCTTA+AGG - chr3_4:497052-497071 None:intergenic 45.0%
AGTTACAGTTGCTGCTATCC+AGG + chr3_4:497270-497289 Msa0483740:CDS 45.0%
GTTACAGTTGCTGCTATCCA+GGG + chr3_4:497271-497290 Msa0483740:CDS 45.0%
! CCGTCGAGCATCATTTTCTC+CGG - chr3_4:486481-486500 None:intergenic 50.0%
CCGGAGAAAATGATGCTCGA+CGG + chr3_4:486478-486497 Msa0483740:exon 50.0%
ACGGAGGAGTTACCAATGCA+CGG - chr3_4:486573-486592 None:intergenic 50.0%
CGATAATCGTGAATCGCGAG+TGG - chr3_4:486628-486647 None:intergenic 50.0%
GAAGCTGGAGATGTTCTTCG+AGG + chr3_4:486950-486969 Msa0483740:CDS 50.0%
CAATCGCGGCAAAATGTTGC+CGG - chr3_4:487030-487049 None:intergenic 50.0%
TCTAGCGCCACTTACAATCG+CGG - chr3_4:487044-487063 None:intergenic 50.0%
TGAGCCGCGATTGACAACAT+TGG + chr3_4:487479-487498 Msa0483740:intron 50.0%
CCCGCTATGCAACATCACTA+TGG - chr3_4:487565-487584 None:intergenic 50.0%
ATCGAAGGAAGCTCCTGCTA+AGG + chr3_4:487987-488006 Msa0483740:CDS 50.0%
GGCATTCAGAATCCTGTTCG+TGG + chr3_4:488042-488061 Msa0483740:intron 50.0%
CTGAGAAAGAGTCCACGAAC+AGG - chr3_4:488057-488076 None:intergenic 50.0%
GTTATATCTGGACTGCCAGC+CGG + chr3_4:488259-488278 Msa0483740:intron 50.0%
CACTGCCTTCAGCAAAGACA+AGG - chr3_4:488976-488995 None:intergenic 50.0%
ATCTGCCAACTATGCAGCAC+TGG - chr3_4:489002-489021 None:intergenic 50.0%
!! GGCATGATTTCTGGTCATGC+AGG + chr3_4:489249-489268 Msa0483740:intron 50.0%
TCTTAGCTGACCCTGAGTTG+AGG + chr3_4:489300-489319 Msa0483740:intron 50.0%
TTCTCGTTTCTCCTTCTCCC+GGG - chr3_4:489360-489379 None:intergenic 50.0%
GCAAACCAGTTACAGGCTTC+GGG - chr3_4:489416-489435 None:intergenic 50.0%
! GCTTCCTAGAGTACTTGAGC+AGG + chr3_4:489584-489603 Msa0483740:CDS 50.0%
!! ACTTGAAGAGCGCCTGCATT+TGG + chr3_4:490065-490084 Msa0483740:intron 50.0%
TGGCTTCCATCTGTGGGATA+TGG - chr3_4:490148-490167 None:intergenic 50.0%
!! GTTATGCTGGCTTCCATCTG+TGG - chr3_4:490155-490174 None:intergenic 50.0%
! GGTTTTGCCCGAGTTTTTGC+AGG + chr3_4:490563-490582 Msa0483740:CDS 50.0%
! TTTGCCCGAGTTTTTGCAGG+TGG + chr3_4:490566-490585 Msa0483740:CDS 50.0%
GCTTCCACCTGCAAAAACTC+GGG - chr3_4:490573-490592 None:intergenic 50.0%
GTCTCGGGTTATATGTGTGC+TGG - chr3_4:490746-490765 None:intergenic 50.0%
GGTGGCCCAACAACTAATCA+AGG - chr3_4:491083-491102 None:intergenic 50.0%
TTGGGCCACCTGTATTGTCT+TGG + chr3_4:491093-491112 Msa0483740:intron 50.0%
CAGTGCCAAGACAATACAGG+TGG - chr3_4:491101-491120 None:intergenic 50.0%
CACCTGTATTGTCTTGGCAC+TGG + chr3_4:491099-491118 Msa0483740:intron 50.0%
CTCCAGTGCCAAGACAATAC+AGG - chr3_4:491104-491123 None:intergenic 50.0%
GATTGAAGGGAAACCACTCC+TGG + chr3_4:491531-491550 Msa0483740:intron 50.0%
! GCTATTTCACGATCCAGGAG+TGG - chr3_4:491547-491566 None:intergenic 50.0%
GTCGCAATGCCTTCGAAGAA+TGG + chr3_4:491733-491752 Msa0483740:intron 50.0%
CGCAATGCCTTCGAAGAATG+GGG + chr3_4:491735-491754 Msa0483740:intron 50.0%
GCAATGCCTTCGAAGAATGG+GGG + chr3_4:491736-491755 Msa0483740:intron 50.0%
TCATCTCCCCCATTCTTCGA+AGG - chr3_4:491745-491764 None:intergenic 50.0%
!!! GGGGCAGTGTTTTAAAACCC+GGG + chr3_4:491846-491865 Msa0483740:intron 50.0%
!!! CAGTGTTTTAAAACCCGGGC+TGG + chr3_4:491850-491869 Msa0483740:intron 50.0%
!!! GTTTTAAAACCCGGGCTGGA+TGG + chr3_4:491854-491873 Msa0483740:intron 50.0%
TGAACCGGCCAAAATTCGGA+TGG + chr3_4:491950-491969 Msa0483740:intron 50.0%
! TGACCGGTCCATCCGAATTT+TGG - chr3_4:491961-491980 None:intergenic 50.0%
!! CCGGTTCACGCAATTTTGAC+CGG - chr3_4:491977-491996 None:intergenic 50.0%
CCGGTCAAAATTGCGTGAAC+CGG + chr3_4:491974-491993 Msa0483740:intron 50.0%
ACGTGAAACTCAGTGCATGC+GGG - chr3_4:492059-492078 None:intergenic 50.0%
!! AGTTGGTGAGGGCGTAAACT+GGG - chr3_4:492121-492140 None:intergenic 50.0%
!! TAGTTGGTGAGGGCGTAAAC+TGG - chr3_4:492122-492141 None:intergenic 50.0%
! TGTCTTATTGAAGGCGTGCC+TGG + chr3_4:492339-492358 Msa0483740:intron 50.0%
CGACACTGACACGCTGATAT+CGG - chr3_4:492436-492455 None:intergenic 50.0%
AGTGTCGTGTCAGTGGCATA+GGG + chr3_4:492449-492468 Msa0483740:intron 50.0%
GGGCTGAGTTCTATCCATGA+AGG + chr3_4:492795-492814 Msa0483740:intron 50.0%
CATAATCTAGTCGATCGGGG+TGG - chr3_4:493535-493554 None:intergenic 50.0%
AGTTTACGCCCTATTCAGGG+AGG + chr3_4:494572-494591 Msa0483740:intron 50.0%
GTTTACGCCCTATTCAGGGA+GGG + chr3_4:494573-494592 Msa0483740:intron 50.0%
TTTACGCCCTATTCAGGGAG+GGG + chr3_4:494574-494593 Msa0483740:intron 50.0%
TAAACCCCCCTCCCTGAATA+GGG - chr3_4:494583-494602 None:intergenic 50.0%
ATAAACCCCCCTCCCTGAAT+AGG - chr3_4:494584-494603 None:intergenic 50.0%
! GTGAGGAAGCACATACTGAC+TGG + chr3_4:494676-494695 Msa0483740:CDS 50.0%
! AGGAAGCACATACTGACTGG+AGG + chr3_4:494679-494698 Msa0483740:CDS 50.0%
ACAGTGAAAGGCAGACGCTT+TGG - chr3_4:494706-494725 None:intergenic 50.0%
AATGCTGGCGGCAATGACAT+AGG + chr3_4:494834-494853 Msa0483740:intron 50.0%
CCAATATGACTCCTGTCAGC+TGG - chr3_4:495110-495129 None:intergenic 50.0%
CCAGCTGACAGGAGTCATAT+TGG + chr3_4:495107-495126 Msa0483740:intron 50.0%
CAGACCATCGAGACTCTGTT+AGG + chr3_4:495719-495738 Msa0483740:intron 50.0%
GACACCTAACAGAGTCTCGA+TGG - chr3_4:495726-495745 None:intergenic 50.0%
GTTGTGCTTGCAATGTGCTG+AGG + chr3_4:495769-495788 Msa0483740:CDS 50.0%
CTTGCAATGTGCTGAGGTAC+TGG + chr3_4:495775-495794 Msa0483740:intron 50.0%
GGCTGCAAATGACTGTGAGT+TGG + chr3_4:495871-495890 Msa0483740:intron 50.0%
ATACCAGGATTCCAGAGCAC+AGG + chr3_4:496063-496082 Msa0483740:intron 50.0%
CAAATGGCAAATGCAGCACG+AGG + chr3_4:497086-497105 Msa0483740:CDS 50.0%
CACTGCAACTCCAGATCCAT+CGG + chr3_4:497330-497349 Msa0483740:CDS 50.0%
! AAAGCATCTGCCGATGGATC+TGG - chr3_4:497343-497362 None:intergenic 50.0%
!! GCTAAGAAAGCATCTGCCGA+TGG - chr3_4:497349-497368 None:intergenic 50.0%
TTCGAGGAAGAGACTCGTCG+TGG + chr3_4:486966-486985 Msa0483740:CDS 55.0%
TGGATGTCTTCAGATCCGGC+TGG - chr3_4:488277-488296 None:intergenic 55.0%
TGGTTCAGGGCTCACCAAAC+TGG - chr3_4:488848-488867 None:intergenic 55.0%
TGCAGCCAGTGCTGCATAGT+TGG + chr3_4:488994-489013 Msa0483740:intron 55.0%
CGACAGCAAGCCTCAACTCA+GGG - chr3_4:489313-489332 None:intergenic 55.0%
!! CCTGAGTTGAGGCTTGCTGT+CGG + chr3_4:489311-489330 Msa0483740:CDS 55.0%
!! CTGAGTTGAGGCTTGCTGTC+GGG + chr3_4:489312-489331 Msa0483740:CDS 55.0%
! TGGCACTGGAGCGAATACCT+TGG + chr3_4:491113-491132 Msa0483740:intron 55.0%
! GGCACTGGAGCGAATACCTT+GGG + chr3_4:491114-491133 Msa0483740:intron 55.0%
GAGCGAATACCTTGGGCATG+AGG + chr3_4:491121-491140 Msa0483740:intron 55.0%
CGAATACCTTGGGCATGAGG+AGG + chr3_4:491124-491143 Msa0483740:intron 55.0%
ACAGCATGGGCGAATGTCTG+TGG + chr3_4:491677-491696 Msa0483740:intron 55.0%
! GTCTGGTTTCCAGTTCGCTC+TGG - chr3_4:491889-491908 None:intergenic 55.0%
AACCAGACCCATGCCCGATT+TGG + chr3_4:491901-491920 Msa0483740:intron 55.0%
!! ACCCATGCCCGATTTGGTCA+GGG + chr3_4:491907-491926 Msa0483740:intron 55.0%
!! CGGTCCATCCGAATTTTGGC+CGG - chr3_4:491957-491976 None:intergenic 55.0%
CGGCCAAAATTCGGATGGAC+CGG + chr3_4:491955-491974 Msa0483740:intron 55.0%
GGCGTAAACTGGGGTGGATA+TGG - chr3_4:492111-492130 None:intergenic 55.0%
! GTTGGTGAGGGCGTAAACTG+GGG - chr3_4:492120-492139 None:intergenic 55.0%
CAGTGTCGTGTCAGTGGCAT+AGG + chr3_4:492448-492467 Msa0483740:intron 55.0%
CGTGTCAGTGGCATAGGGTT+TGG + chr3_4:492454-492473 Msa0483740:intron 55.0%
TCTGGCATAGTGCCTTGACC+CGG + chr3_4:492647-492666 Msa0483740:intron 55.0%
GGATCCCTCTCTCACGTGAA+CGG - chr3_4:492706-492725 None:intergenic 55.0%
TGACGGGACTCCTGATGAAG+AGG + chr3_4:494213-494232 Msa0483740:CDS 55.0%
TTACGCCCTATTCAGGGAGG+GGG + chr3_4:494575-494594 Msa0483740:intron 55.0%
CTGGCGGCAATGACATAGGA+TGG + chr3_4:494838-494857 Msa0483740:intron 55.0%
CAGTTGGTCAGGCAGTTGCA+AGG + chr3_4:495343-495362 Msa0483740:intron 55.0%
CGAGACTCTGTTAGGTGTCC+TGG + chr3_4:495727-495746 Msa0483740:CDS 55.0%
GCAATGCTAACTCTGGTGCC+AGG - chr3_4:495748-495767 None:intergenic 55.0%
!! TGACCTGTGCTCTGGAATCC+TGG - chr3_4:496069-496088 None:intergenic 55.0%
GATAGCTGTGACCTGTGCTC+TGG - chr3_4:496077-496096 None:intergenic 55.0%
AATGCAGCACGAGGTAGCAC+CGG + chr3_4:497095-497114 Msa0483740:CDS 55.0%
GAAGAGAAGTTCCTCGCCGC+CGG + chr3_4:486511-486530 Msa0483740:CDS 60.0%
CTGTTGAAGTCCGGCGATGC+CGG - chr3_4:486533-486552 None:intergenic 60.0%
TACGAGCTTGTCCAGCACGC+CGG + chr3_4:487008-487027 Msa0483740:CDS 60.0%
GCAAAATGTTGCCGGCGTGC+TGG - chr3_4:487022-487041 None:intergenic 60.0%
TTGGGTGCGGATGCAGCATC+AGG + chr3_4:488627-488646 Msa0483740:CDS 60.0%
GTGCGGATGCAGCATCAGGT+TGG + chr3_4:488631-488650 Msa0483740:intron 60.0%
CCGACAGCAAGCCTCAACTC+AGG - chr3_4:489314-489333 None:intergenic 60.0%
!! AGGCTTGCTGTCGGGCTTTC+TGG + chr3_4:489320-489339 Msa0483740:CDS 60.0%
! TGTCGGGCTTTCTGGTCTGC+AGG + chr3_4:489328-489347 Msa0483740:CDS 60.0%
! GTCGGGCTTTCTGGTCTGCA+GGG + chr3_4:489329-489348 Msa0483740:CDS 60.0%
! TCGGGCTTTCTGGTCTGCAG+GGG + chr3_4:489330-489349 Msa0483740:CDS 60.0%
CGTTTCTCCTTCTCCCGGGA+AGG - chr3_4:489356-489375 None:intergenic 60.0%
GGGCGCTTACCCTCAACTTC+AGG + chr3_4:489808-489827 Msa0483740:CDS 60.0%
ACTACGCCTCCTCATGCCCA+AGG - chr3_4:491133-491152 None:intergenic 60.0%
! GGCATGAGGAGGCGTAGTAG+AGG + chr3_4:491135-491154 Msa0483740:intron 60.0%
! ACCCGGGCTGGATGGTTGAA+CGG + chr3_4:491862-491881 Msa0483740:intron 60.0%
TTGAACGGGCCAGAGCGAAC+TGG + chr3_4:491877-491896 Msa0483740:intron 60.0%
GACCAAATCGGGCATGGGTC+TGG - chr3_4:491906-491925 None:intergenic 60.0%
!! GACCCATGCCCGATTTGGTC+AGG + chr3_4:491906-491925 Msa0483740:intron 60.0%
GCCCTGACCAAATCGGGCAT+GGG - chr3_4:491911-491930 None:intergenic 60.0%
TGCCCTGACCAAATCGGGCA+TGG - chr3_4:491912-491931 None:intergenic 60.0%
GCGTGTCAGTGTCGTGTCAG+TGG + chr3_4:492442-492461 Msa0483740:intron 60.0%
TTGGGCCGTTCACGTGAGAG+AGG + chr3_4:492698-492717 Msa0483740:intron 60.0%
TGGGCCGTTCACGTGAGAGA+GGG + chr3_4:492699-492718 Msa0483740:intron 60.0%
ACTCCAGCAGTGGGCATGTC+AGG - chr3_4:493470-493489 None:intergenic 60.0%
TACGCCCTATTCAGGGAGGG+GGG + chr3_4:494576-494595 Msa0483740:intron 60.0%
TTGAAGTCCGGCGATGCCGG+CGG - chr3_4:486530-486549 None:intergenic 65.0%
CCCGTTCAACCATCCAGCCC+GGG - chr3_4:491866-491885 None:intergenic 65.0%
! CCCGGGCTGGATGGTTGAAC+GGG + chr3_4:491863-491882 Msa0483740:intron 65.0%
GCCCGTTCAACCATCCAGCC+CGG - chr3_4:491867-491886 None:intergenic 65.0%
! GGTGAGGGCGTAAACTGGGG+TGG - chr3_4:492117-492136 None:intergenic 65.0%
CAGCCTGACATGCCCACTGC+TGG + chr3_4:493464-493483 Msa0483740:CDS 65.0%
CTGGTCTGCAGGGGCCTTCC+CGG + chr3_4:489339-489358 Msa0483740:CDS 70.0%
TGGTCTGCAGGGGCCTTCCC+GGG + chr3_4:489340-489359 Msa0483740:CDS 70.0%
TTCCTCGCCGCCGGCATCGC+CGG + chr3_4:486520-486539 Msa0483740:CDS 75.0%
GCAGGGGCCTTCCCGGGAGA+AGG + chr3_4:489346-489365 Msa0483740:CDS 75.0%
! GTCCGGCGATGCCGGCGGCG+AGG - chr3_4:486525-486544 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 486247 497838 486247 ID=Msa0483740;Name=Msa0483740
chr3_4 mRNA 486247 497838 486247 ID=Msa0483740-mRNA-1;Parent=Msa0483740;Name=Msa0483740-mRNA-1;_AED=0.16;_eAED=0.16;_QI=240|0.85|0.85|1|0.85|0.85|21|391|759
chr3_4 exon 486247 486579 486247 ID=Msa0483740-mRNA-1:exon:131;Parent=Msa0483740-mRNA-1
chr3_4 exon 486715 486811 486715 ID=Msa0483740-mRNA-1:exon:132;Parent=Msa0483740-mRNA-1
chr3_4 exon 486925 487048 486925 ID=Msa0483740-mRNA-1:exon:133;Parent=Msa0483740-mRNA-1
chr3_4 exon 487951 488026 487951 ID=Msa0483740-mRNA-1:exon:134;Parent=Msa0483740-mRNA-1
chr3_4 exon 488561 488648 488561 ID=Msa0483740-mRNA-1:exon:135;Parent=Msa0483740-mRNA-1
chr3_4 exon 489306 489406 489306 ID=Msa0483740-mRNA-1:exon:136;Parent=Msa0483740-mRNA-1
chr3_4 exon 489516 489605 489516 ID=Msa0483740-mRNA-1:exon:137;Parent=Msa0483740-mRNA-1
chr3_4 exon 489707 489829 489707 ID=Msa0483740-mRNA-1:exon:138;Parent=Msa0483740-mRNA-1
chr3_4 exon 490489 490623 490489 ID=Msa0483740-mRNA-1:exon:139;Parent=Msa0483740-mRNA-1
chr3_4 exon 493452 493568 493452 ID=Msa0483740-mRNA-1:exon:140;Parent=Msa0483740-mRNA-1
chr3_4 exon 493850 494089 493850 ID=Msa0483740-mRNA-1:exon:141;Parent=Msa0483740-mRNA-1
chr3_4 exon 494169 494234 494169 ID=Msa0483740-mRNA-1:exon:142;Parent=Msa0483740-mRNA-1
chr3_4 exon 494406 494495 494406 ID=Msa0483740-mRNA-1:exon:143;Parent=Msa0483740-mRNA-1
chr3_4 exon 494664 494753 494664 ID=Msa0483740-mRNA-1:exon:144;Parent=Msa0483740-mRNA-1
chr3_4 exon 495346 495447 495346 ID=Msa0483740-mRNA-1:exon:145;Parent=Msa0483740-mRNA-1
chr3_4 exon 495722 495790 495722 ID=Msa0483740-mRNA-1:exon:146;Parent=Msa0483740-mRNA-1
chr3_4 exon 495872 495952 495872 ID=Msa0483740-mRNA-1:exon:147;Parent=Msa0483740-mRNA-1
chr3_4 exon 496070 496177 496070 ID=Msa0483740-mRNA-1:exon:148;Parent=Msa0483740-mRNA-1
chr3_4 exon 496310 496374 496310 ID=Msa0483740-mRNA-1:exon:149;Parent=Msa0483740-mRNA-1
chr3_4 exon 497037 497150 497037 ID=Msa0483740-mRNA-1:exon:150;Parent=Msa0483740-mRNA-1
chr3_4 exon 497237 497838 497237 ID=Msa0483740-mRNA-1:exon:151;Parent=Msa0483740-mRNA-1
chr3_4 five_prime_UTR 486247 486486 486247 ID=Msa0483740-mRNA-1:five_prime_utr;Parent=Msa0483740-mRNA-1
chr3_4 CDS 486487 486579 486487 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 486715 486811 486715 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 486925 487048 486925 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 487951 488026 487951 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 488561 488648 488561 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 489306 489406 489306 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 489516 489605 489516 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 489707 489829 489707 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 490489 490623 490489 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 493452 493568 493452 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 493850 494089 493850 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 494169 494234 494169 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 494406 494495 494406 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 494664 494753 494664 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 495346 495447 495346 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 495722 495790 495722 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 495872 495952 495872 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 496070 496177 496070 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 496310 496374 496310 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 497037 497150 497037 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 CDS 497237 497447 497237 ID=Msa0483740-mRNA-1:cds;Parent=Msa0483740-mRNA-1
chr3_4 three_prime_UTR 497448 497838 497448 ID=Msa0483740-mRNA-1:three_prime_utr;Parent=Msa0483740-mRNA-1
Gene Sequence

>Msa0483740

ATGATGCTCGACGGAACCGAAGATGAAGAGAAGTTCCTCGCCGCCGGCATCGCCGGACTTCAACAGAATTCATTCTACATGCACCGTGCATTGGATTCGAACAATCTCAGAGATGCTTTGAAATATTCTGCTCAGATGCTTTCTGAACTTCGCACTTCTAAGCTTTCTCCTCACAAATACTACGAACTTTATATGCGCGCATTTGATCAATTGAGGAAGCTGGAGATGTTCTTCGAGGAAGAGACTCGTCGTGGTTGCTCCATTATTGATCTTTACGAGCTTGTCCAGCACGCCGGCAACATTTTGCCGCGATTGTATCTCCTCTGTACAGTAGGATCTGTATACATCAAATCGAAGGAAGCTCCTGCTAAGGATGTTCTTAAGGATCTTGGATGCAGATACTGTATCAGATGCTGTAGAGTTTGTACTCCAAAATTTCACAGAAATGAACAAACTTTGGGTGCGGATGCAGCATCAGCTGACCCTGAGTTGAGGCTTGCTGTCGGGCTTTCTGGTCTGCAGGGGCCTTCCCGGGAGAAGGAGAAACGAGAAAAGGAGAGGAACGAGCTGCGAGATCTTGTTGGGAAGAATCTTCATGTTCTCAGTCAGATAGAGGGTGTTGACCTTGAGATGTACAAAGATGTTGTGCTTCCTAGAGTACTTGAGCAGGTCGTGAATTGCAAAGATGAGTTGGCCCAATTCTACTTGATGGATTGCATAATTCAAGTCTTCCCTGATGAGTACCATTTGCAAACTCTTGATGTGCTGTTGGGCGCTTACCCTCAACTTCAGTCATCTGTTGACATCAAGACAGTACTATCCCAGTTAATGGAAAGGCTTTCAAATTATGCTGCTTCAAGTGCAGAGGTTTTGCCCGAGTTTTTGCAGGTGGAAGCATTTTCCAAATTAAGCAATGCAATTGGCAAGGTCATAGAGGCACAGCCTGACATGCCCACTGCTGGAGTTGTAACTTTATATTCATCTCTTCTTACTTTCACTCTTCATGTCCACCCCGATCGACTAGATTATGCTGATCAAGTCTTGGGAGCATGTGTGAAAAATCTCTCTGGCAAAGGTAAAATTGAGGACAAGAAGGCAACGAAGCAAATTGTTGCTTTATTAAGTGCTCCACTAGAGAAATATAATGACATTATGACTGCCTTGAAGCTTTCAAACTACCCTCGTGTAATGGAATTCCTTGACGTTCCAACTAATAAGGTCATGGCAACTGTTATTATTCAAAGCATTATGAAAAATGGAACACGCATTTCTACCTCTGACAAGGTTGAAGCATTGTTTGAACTGATAAAGGGGCTTATCAAGGATTCTGACGGGACTCCTGATGAAGAGTTGGATGAAGATGATTTCAAAGAGGAGCAGAATTCTGTTGCACGTCTGATCCAAATGTTTTATAATGATGATCCAGAAGAGATGTTTAAGATCATTGAAACTGTGAGGAAGCACATACTGACTGGAGGACCAAAGCGTCTGCCTTTCACTGTTCCACCTCTTATGTTTTCTTCTTTAAAGTTGGTCAGGCAGTTGCAAGGTCAAAGTCAAAGTCAAGAAGAAAATCCTTTTGGAGATGATGCATCAACATCACCAAAGAAAATCTTTCAGCTTTTGAATCAGACCATCGAGACTCTGTTAGGTGTCCTGGCACCAGAGTTAGCATTGCAGTTGTGCTTGCAATGTGCTGAGGCTGCAAATGACTGTGAGTTGGAACCTGTTGCATATGAATTTTTTACTCAAGCTTATATTCTATACGAAGAAGAAATTTCTGATTCCAGAGCACAGGTCACAGCTATCCATTTGATAATAGGAACTCTTCAAAGGATGCATGTCTTCGGTGTTGAGAACAGGGATACTTTAACTCACAAGGCCACAGGGAGCTGTGTATGCTTGCTCACATTTGTTTGGGTTGATGATCATGATAACATGAAAGATGGAGAGAGAGTCCTATTATGCCTTAAGCGGGCTTTAAGGATTGCAAATGCTGCACAACAAATGGCAAATGCAGCACGAGGTAGCACCGGATCAGTAATGCTCTTCATTGAGATTTTGAACAAGTATCTTTACTTCTTTGAGAAGGGAAACCCACAAGTTACAGTTGCTGCTATCCAGGGCCTAATTGAGTTAATTATGAATGAAATGCAAAGTGACACTGCAACTCCAGATCCATCGGCAGATGCTTTCTTAGCCACTACTATGCGCTATATACAGTTCCAAAAACAAAAGGGTGGTACAGTTGGTGAGAAATATGAACCAATCAAGGTTTGA
Protein sequence

>Msa0483740

MMLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLGCRYCIRCCRVCTPKFHRNEQTLGADAASADPELRLAVGLSGLQGPSREKEKREKERNELRDLVGKNLHVLSQIEGVDLEMYKDVVLPRVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQSSVDIKTVLSQLMERLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQPDMPTAGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKNLSGKGKIEDKKATKQIVALLSAPLEKYNDIMTALKLSNYPRVMEFLDVPTNKVMATVIIQSIMKNGTRISTSDKVEALFELIKGLIKDSDGTPDEELDEDDFKEEQNSVARLIQMFYNDDPEEMFKIIETVRKHILTGGPKRLPFTVPPLMFSSLKLVRQLQGQSQSQEENPFGDDASTSPKKIFQLLNQTIETLLGVLAPELALQLCLQCAEAANDCELEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGSCVCLLTFVWVDDHDNMKDGERVLLCLKRALRIANAAQQMANAARGSTGSVMLFIEILNKYLYFFEKGNPQVTVAAIQGLIELIMNEMQSDTATPDPSADAFLATTMRYIQFQKQKGGTVGEKYEPIKV*