AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1320820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1320820 MtrunA17_Chr8g0352451 95.575 339 11 1 1 335 67 405 0.0 653
Msa1320820 MtrunA17_Chr5g0393371 57.500 320 128 3 1 314 1 318 9.19e-127 369
Msa1320820 MtrunA17_Chr1g0159511 56.051 314 126 3 1 309 1 307 1.28e-114 337
Msa1320820 MtrunA17_Chr1g0159501 48.305 236 106 5 80 309 1 226 6.48e-62 197
Msa1320820 MtrunA17_Chr1g0159491 63.158 76 28 0 1 76 1 76 1.89e-25 97.4
Msa1320820 MtrunA17_Chr4g0010781 55.072 69 31 0 6 74 86 154 1.61e-15 77.0
Msa1320820 MtrunA17_Chr8g0334811 56.164 73 28 2 5 77 13 81 1.34e-14 74.3
Msa1320820 MtrunA17_Chr3g0087741 52.308 65 31 0 7 71 90 154 1.42e-14 74.3
Msa1320820 MtrunA17_Chr7g0269841 43.158 95 47 1 6 93 26 120 9.28e-14 71.2
Msa1320820 MtrunA17_Chr4g0041461 36.283 113 67 3 7 116 73 183 4.12e-13 69.3
Msa1320820 MtrunA17_Chr1g0209551 46.575 73 39 0 8 80 18 90 1.33e-12 68.2
Msa1320820 MtrunA17_Chr5g0414471 43.011 93 44 2 8 91 27 119 2.05e-12 67.8
Msa1320820 MtrunA17_Chr7g0258061 51.562 64 31 0 8 71 24 87 2.45e-12 66.2
Msa1320820 MtrunA17_Chr3g0123861 50.725 69 33 1 7 75 83 150 3.72e-12 67.0
Msa1320820 MtrunA17_Chr2g0322181 54.795 73 29 2 5 77 12 80 1.79e-11 64.7
Msa1320820 MtrunA17_Chr1g0173931 40.000 90 51 1 5 91 37 126 2.38e-11 63.5
Msa1320820 MtrunA17_Chr3g0138471 38.776 98 57 2 7 101 5 102 3.52e-11 63.5
Msa1320820 MtrunA17_Chr2g0333221 40.860 93 47 2 7 92 71 162 6.95e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1320820 AT4G39150.3 68.622 341 101 2 1 335 1 341 1.61e-173 485
Msa1320820 AT4G39150.1 68.622 341 101 2 1 335 1 341 1.61e-173 485
Msa1320820 AT4G39150.2 68.622 341 101 2 1 335 1 341 1.61e-173 485
Msa1320820 AT2G21510.3 67.836 342 103 3 1 335 1 342 4.81e-167 469
Msa1320820 AT2G21510.1 67.836 342 103 3 1 335 1 342 4.81e-167 469
Msa1320820 AT2G21510.2 66.476 349 103 4 1 335 1 349 2.62e-164 462
Msa1320820 AT2G21510.4 66.476 349 103 4 1 335 1 349 2.62e-164 462
Msa1320820 AT2G21510.5 69.497 318 91 2 1 312 1 318 3.02e-160 451
Msa1320820 AT1G21080.3 54.655 333 141 5 1 327 1 329 3.31e-118 347
Msa1320820 AT1G21080.1 54.655 333 141 5 1 327 1 329 3.35e-118 347
Msa1320820 AT1G76700.1 56.563 320 130 5 1 314 1 317 8.72e-118 346
Msa1320820 AT1G77020.1 53.727 322 135 4 1 314 1 316 6.04e-112 330
Msa1320820 AT1G21080.2 51.020 245 111 4 89 327 1 242 3.61e-71 223
Msa1320820 AT5G48030.1 49.315 73 37 0 7 79 95 167 2.74e-14 73.9
Msa1320820 AT1G59980.1 43.011 93 44 2 8 91 25 117 9.08e-14 72.0
Msa1320820 AT1G59980.2 43.011 93 44 2 8 91 25 117 9.26e-14 72.0
Msa1320820 AT1G71000.2 49.254 67 30 1 6 68 8 74 1.45e-13 68.2
Msa1320820 AT1G71000.1 49.254 67 30 1 6 68 8 74 7.78e-13 66.2
Msa1320820 AT2G22360.1 43.956 91 44 2 7 91 87 176 5.04e-12 67.0
Msa1320820 AT2G42750.1 33.628 113 70 3 7 116 77 187 9.65e-12 65.9
Msa1320820 AT1G68370.1 46.575 73 39 0 8 80 19 91 9.92e-12 65.9
Msa1320820 AT5G22060.1 45.745 94 42 3 5 93 13 102 1.74e-11 65.1
Msa1320820 AT3G62600.1 38.835 103 53 1 6 98 26 128 1.77e-11 64.7
Msa1320820 AT4G39960.1 41.489 94 48 2 4 91 83 175 2.01e-11 65.1
Msa1320820 AT4G39960.2 41.489 94 48 2 4 91 83 175 2.01e-11 65.1
Msa1320820 AT1G28210.3 47.619 63 33 0 7 69 49 111 2.51e-11 64.7
Msa1320820 AT1G28210.1 47.619 63 33 0 7 69 49 111 2.57e-11 64.7
Msa1320820 AT1G28210.2 47.619 63 33 0 7 69 49 111 2.87e-11 64.7
Msa1320820 AT1G80030.2 42.553 94 46 2 7 93 76 168 4.73e-11 63.9
Msa1320820 AT1G80030.3 42.553 94 46 2 7 93 76 168 4.73e-11 63.9
Msa1320820 AT1G80030.1 42.553 94 46 2 7 93 76 168 4.73e-11 63.9
Msa1320820 AT1G80030.4 42.553 94 46 2 7 93 76 168 5.07e-11 63.9
Msa1320820 AT5G25530.2 47.887 71 36 1 7 76 5 75 6.32e-11 63.2
Msa1320820 AT1G24120.1 34.058 138 71 4 8 131 22 153 7.04e-11 63.5
Msa1320820 AT3G17830.1 45.000 80 39 2 1 78 58 134 7.73e-11 63.5

Find 85 sgRNAs with CRISPR-Local

Find 591 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTATGAACGTCCCCTTCT+TGG 0.203191 8_4:-25658484 Msa1320820:CDS
ATGGACCCTACAACTGTATT+TGG 0.220684 8_4:-25660560 Msa1320820:CDS
CCGTCACTTGTGACTTTATA+CGG 0.231978 8_4:+25658436 None:intergenic
ATCATGTTCTTGTGGCCTTC+TGG 0.240195 8_4:-25657475 Msa1320820:three_prime_UTR
GCCCAATGAAATAGGAATTT+AGG 0.268447 8_4:+25657239 None:intergenic
TTTCACTTTGACTTGTGAAT+TGG 0.282563 8_4:-25657351 Msa1320820:three_prime_UTR
ATGCCATGATTAATTCCTTA+TGG 0.294708 8_4:-25658215 Msa1320820:CDS
CTTGTTCAGTTTGCTCAGTA+TGG 0.296516 8_4:-25657513 Msa1320820:three_prime_UTR
TCCCAACTGTTTCAATGCTT+TGG 0.299675 8_4:+25657766 None:intergenic
TCCTCTCAATTTCTTAAAGT+TGG 0.302103 8_4:-25665298 Msa1320820:five_prime_UTR
ATCCTAAATTCCTATTTCAT+TGG 0.303658 8_4:-25657241 Msa1320820:three_prime_UTR
TATCCTCTGCCCAATGAAAT+AGG 0.304180 8_4:+25657231 None:intergenic
GAGAAGAAGAATTTACAAAA+TGG 0.335589 8_4:-25660230 Msa1320820:CDS
CGTTTGCAACCATTTGTTGA+TGG 0.347187 8_4:-25660255 Msa1320820:CDS
AAGAGCTTGGAAAGGATATT+CGG 0.361247 8_4:-25658506 Msa1320820:CDS
TTACAATAGAAGAAAGAAAC+AGG 0.363609 8_4:+25657433 None:intergenic
AAGGTGAACATGTGGAAATC+CGG 0.365725 8_4:-25657084 None:intergenic
TCACAAGTGACGGCAGCTTC+AGG 0.368911 8_4:-25658426 Msa1320820:intron
CCGAGACACCAGAACGTCTT+TGG 0.391989 8_4:+25657790 None:intergenic
TCCTAAATTCCTATTTCATT+GGG 0.392333 8_4:-25657240 Msa1320820:three_prime_UTR
ATCTGCTGCAGATATCAAAA+AGG 0.400557 8_4:-25665057 Msa1320820:CDS
CCAAAGACGTTCTGGTGTCT+CGG 0.400902 8_4:-25657790 Msa1320820:CDS
CGTTGTCGTTTGAAAGTACT+AGG 0.412075 8_4:+25665358 None:intergenic
TAGGTAGCTGTTTGAACATA+AGG 0.416583 8_4:+25665377 None:intergenic
TCATATGCTTCACGCTTCTC+AGG 0.426988 8_4:+25663511 None:intergenic
ATACGGATCCACAAGAAATC+TGG 0.427181 8_4:-25665327 Msa1320820:five_prime_UTR
AGCATTCCAAATACAGTTGT+AGG 0.431003 8_4:+25660554 None:intergenic
CTGGGTTGCTTCGAAAATCC+TGG 0.431892 8_4:-25665253 Msa1320820:intron
ACTGCTTACTATGATACATT+AGG 0.437505 8_4:-25665095 Msa1320820:CDS
TCTTCTCGGCCATCAACAAA+TGG 0.447880 8_4:+25660246 None:intergenic
CTTACATGCAGAATGGACTA+TGG 0.450476 8_4:+25657325 None:intergenic
GCTGCTTGGTGAGGCCTACC+AGG 0.462884 8_4:-25663545 Msa1320820:CDS
TGCATACGAACTTGAGGCTC+CGG 0.463592 8_4:+25660449 None:intergenic
AGAAGAAGAATTTACAAAAT+GGG 0.464479 8_4:-25660229 Msa1320820:CDS
CAAAGACGTTCTGGTGTCTC+GGG 0.475363 8_4:-25657789 Msa1320820:CDS
AGGTGAACATGTGGAAATCC+GGG 0.479299 8_4:-25657083 None:intergenic
TCTGCAGCCTTGGGATCCCC+AGG 0.481072 8_4:+25663784 None:intergenic
GGCCAAAGCATTGAAACAGT+TGG 0.482739 8_4:-25657768 Msa1320820:CDS
AAGTGTGTCCAAAGACGTTC+TGG 0.485022 8_4:-25657798 Msa1320820:CDS
GCTCGTAATCTTTCAAAAGC+TGG 0.485258 8_4:-25660195 Msa1320820:intron
TTGGGCAGAGGATATGTAGA+TGG 0.487217 8_4:-25657222 Msa1320820:three_prime_UTR
TCGGACCCACTCGGCCAAGA+AGG 0.488488 8_4:+25658470 None:intergenic
AATGACATTAATCTTCCATA+AGG 0.489818 8_4:+25658200 None:intergenic
GCCAAAGCATTGAAACAGTT+GGG 0.490202 8_4:-25657767 Msa1320820:CDS
AATGACAAGCAGGTGGAAGC+TGG 0.494158 8_4:-25657553 Msa1320820:CDS
AAGAGAACAGAAGCTGATAT+CGG 0.494342 8_4:-25660289 Msa1320820:CDS
GAAAGCTCTTGAAGATAAGA+AGG 0.500121 8_4:-25658238 Msa1320820:CDS
TTATACGGTGTCCTTTGTCT+CGG 0.503645 8_4:+25658451 None:intergenic
CGTCCCCTTCTTGGCCGAGT+GGG 0.504973 8_4:-25658475 Msa1320820:CDS
CGAAAAGCAGCAAAAGAGCT+TGG 0.510724 8_4:-25658519 Msa1320820:CDS
GAAGATTGCCAGATTTCTTG+TGG 0.511168 8_4:+25665319 None:intergenic
CTTCCATAAGGAATTAATCA+TGG 0.512807 8_4:+25658212 None:intergenic
TTTAGCATCTATAGAAGTTG+AGG 0.524735 8_4:-25660480 Msa1320820:CDS
AGAACGTCTTTGGACACACT+TGG 0.530750 8_4:+25657800 None:intergenic
ATTCCTATTTCATTGGGCAG+AGG 0.536939 8_4:-25657234 Msa1320820:three_prime_UTR
TTGAGTTGATCATGTTCTTG+TGG 0.540154 8_4:-25657483 Msa1320820:three_prime_UTR
TCCTTTGTCTCGGACCCACT+CGG 0.542401 8_4:+25658461 None:intergenic
CTAGAAACTTACATGCAGAA+TGG 0.552941 8_4:+25657318 None:intergenic
CATCAACAAATGGTTGCAAA+CGG 0.554325 8_4:+25660256 None:intergenic
TACAGTTGTAGGGTCCATCA+TGG 0.554550 8_4:+25660565 None:intergenic
TCCAACTTTAAGAAATTGAG+AGG 0.558155 8_4:+25665297 None:intergenic
GAGCTCAAGAAGCTAAATCA+AGG 0.558223 8_4:-25658285 Msa1320820:CDS
GCCGAGTGGGTCCGAGACAA+AGG 0.559832 8_4:-25658462 Msa1320820:CDS
TCTCAGGATCGCTTAAAACC+TGG 0.564099 8_4:+25663527 None:intergenic
AGAAGTTGAGGAAGATTCAC+CGG 0.567208 8_4:-25660468 Msa1320820:CDS
GCATTCCAAATACAGTTGTA+GGG 0.573160 8_4:+25660555 None:intergenic
GGACCCACTCGGCCAAGAAG+GGG 0.573409 8_4:+25658472 None:intergenic
GAGGCCATGCTACATACAAT+CGG 0.573820 8_4:-25658555 Msa1320820:CDS
TGGATGGACATTCTGTGGAT+TGG 0.576617 8_4:-25657202 Msa1320820:three_prime_UTR
ACGCCGAGAAAATGACAAGC+AGG 0.587293 8_4:-25657563 Msa1320820:CDS
AAATTTCATTTAGAGCCAGA+AGG 0.589267 8_4:+25657460 None:intergenic
GCAGAGGATATGTAGATGGA+TGG 0.590954 8_4:-25657218 Msa1320820:three_prime_UTR
TCTATACCAGCTGCTTGGTG+AGG 0.596878 8_4:-25663554 Msa1320820:intron
TGGTATCTATACCAGCTGCT+TGG 0.606086 8_4:-25663559 Msa1320820:intron
AATGAAATAGGAATTTAGGA+TGG 0.610963 8_4:+25657243 None:intergenic
CCGTATAAAGTCACAAGTGA+CGG 0.619727 8_4:-25658436 Msa1320820:CDS
AGCAGCAAAAGAGCTTGGAA+AGG 0.622250 8_4:-25658514 Msa1320820:CDS
ACGTCCCCTTCTTGGCCGAG+TGG 0.626832 8_4:-25658476 Msa1320820:CDS
TGAACAAGATGATTATGATG+AGG 0.639505 8_4:+25657528 None:intergenic
GGTGAACATGTGGAAATCCG+GGG 0.648954 8_4:-25657082 None:intergenic
ATAACCGATTGTATGTAGCA+TGG 0.649437 8_4:+25658551 None:intergenic
CCGAGAAAATGACAAGCAGG+TGG 0.650064 8_4:-25657560 Msa1320820:CDS
AGGATCGCTTAAAACCTGGT+AGG 0.657593 8_4:+25663531 None:intergenic
GTAGATGGATGGACATTCTG+TGG 0.660797 8_4:-25657207 Msa1320820:three_prime_UTR
TACAATAGAAGAAAGAAACA+GGG 0.692547 8_4:+25657434 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTAACAATAAACTTAAA+TGG - chr8_4:25657698-25657717 Msa1320820:intron 10.0%
!! TATTAACAATAAACTTAAAT+GGG - chr8_4:25657699-25657718 Msa1320820:intron 10.0%
!! TTAATAAAATCTAGTAATAT+TGG + chr8_4:25658767-25658786 None:intergenic 10.0%
!!! CAAAAAAAAATATTTTTATG+AGG + chr8_4:25659586-25659605 None:intergenic 10.0%
!!! ATTTTTTTGCATAATTTTAG+AGG - chr8_4:25657317-25657336 Msa1320820:three_prime_UTR 15.0%
!! TTTGATATGACAAAATTAAA+GGG + chr8_4:25657484-25657503 None:intergenic 15.0%
!!! TTTTGATATGACAAAATTAA+AGG + chr8_4:25657485-25657504 None:intergenic 15.0%
!!! TTAATTTTGTCATATCAAAA+AGG - chr8_4:25657485-25657504 Msa1320820:three_prime_UTR 15.0%
!!! TAATTGAAGATTTTCAATTT+AGG + chr8_4:25658290-25658309 None:intergenic 15.0%
!!! AAAAATATTTTTATGAGGTT+GGG + chr8_4:25659581-25659600 None:intergenic 15.0%
!!! AAAAAATATTTTTATGAGGT+TGG + chr8_4:25659582-25659601 None:intergenic 15.0%
!! GCATAAAAATAATACATATT+GGG + chr8_4:25663303-25663322 None:intergenic 15.0%
!! AGCATAAAAATAATACATAT+TGG + chr8_4:25663304-25663323 None:intergenic 15.0%
!! AATATGTAAATGATGTTATT+AGG - chr8_4:25663347-25663366 Msa1320820:intron 15.0%
!!! TTTTATAGCTTATTTAGAAA+AGG + chr8_4:25663491-25663510 None:intergenic 15.0%
!! TAGAATAAATACTTGAATTA+TGG + chr8_4:25664510-25664529 None:intergenic 15.0%
!!! AAAGCTATATTACTTTTAAT+TGG - chr8_4:25665089-25665108 Msa1320820:CDS 15.0%
!!! TTTTTTCATTTTTACCTTCT+GGG - chr8_4:25657204-25657223 Msa1320820:three_prime_UTR 20.0%
!! CGATATATATCATATATGAA+TGG + chr8_4:25657280-25657299 None:intergenic 20.0%
!! TGATTTGATATCACAAAAAA+TGG - chr8_4:25657349-25657368 Msa1320820:three_prime_UTR 20.0%
!! CAATCTATGACAAAATTAAA+GGG + chr8_4:25657551-25657570 None:intergenic 20.0%
!! TCAATCTATGACAAAATTAA+AGG + chr8_4:25657552-25657571 None:intergenic 20.0%
!!! AAGTTATAAAGTGTTAGATT+TGG - chr8_4:25657604-25657623 Msa1320820:intron 20.0%
!!! ATTTGGAGAACTTTTTAAAT+GGG - chr8_4:25657621-25657640 Msa1320820:intron 20.0%
!! ATAGTATATGTCATACAATT+TGG - chr8_4:25658233-25658252 Msa1320820:CDS 20.0%
!!! TACATTAGTTTTTTTTGCAA+TGG - chr8_4:25658308-25658327 Msa1320820:CDS 20.0%
!! TCTTCTAAATTAAAGAAAGT+CGG + chr8_4:25658545-25658564 None:intergenic 20.0%
!!! TCAATATACTTTTCTAAGTT+TGG - chr8_4:25658896-25658915 Msa1320820:intron 20.0%
!! TGATATCAGGTATTTAAATT+GGG + chr8_4:25659340-25659359 None:intergenic 20.0%
!!! ATATTTTTTTTTGTTGTTGC+TGG - chr8_4:25659593-25659612 Msa1320820:intron 20.0%
!!! TTGTTATAATCATGATTTTG+CGG - chr8_4:25659693-25659712 Msa1320820:intron 20.0%
!!! TGTATGTATATATGATTTTG+AGG + chr8_4:25659742-25659761 None:intergenic 20.0%
!! TGAAATTTAGTAAGATTACT+TGG + chr8_4:25659896-25659915 None:intergenic 20.0%
!! AAATTAAGAAAGACCTTATA+TGG - chr8_4:25660356-25660375 Msa1320820:intron 20.0%
!! TAGATGATATAATCATTGTT+GGG - chr8_4:25660493-25660512 Msa1320820:CDS 20.0%
!!! AAGTTGTACTAAATTTTAGT+TGG + chr8_4:25660783-25660802 None:intergenic 20.0%
!! TTATGAATTAACTAGCAAAA+AGG - chr8_4:25661054-25661073 Msa1320820:intron 20.0%
!! CGTTAATTATAGTAGAATTT+GGG - chr8_4:25661088-25661107 Msa1320820:intron 20.0%
!! TTACCAACTAATTAACTATT+GGG + chr8_4:25661629-25661648 None:intergenic 20.0%
!! TTTACCAACTAATTAACTAT+TGG + chr8_4:25661630-25661649 None:intergenic 20.0%
!!! ATTTTTATGAACATTTTGCA+AGG - chr8_4:25661707-25661726 Msa1320820:intron 20.0%
!!! ATAATTCTGGAAAATACAAT+TGG + chr8_4:25661770-25661789 None:intergenic 20.0%
!! TTATTGCAAGAATATAATTC+TGG + chr8_4:25661783-25661802 None:intergenic 20.0%
!!! ATTTTGTAAATTCTTCTTCT+CGG + chr8_4:25662246-25662265 None:intergenic 20.0%
!! AGAAGAAGAATTTACAAAAT+GGG - chr8_4:25662246-25662265 Msa1320820:intron 20.0%
!! GAAAAATTCCATTTATTATC+TGG + chr8_4:25662591-25662610 None:intergenic 20.0%
!! ATATCTTGAAAATAGTAAGA+AGG - chr8_4:25663044-25663063 Msa1320820:intron 20.0%
!! TCCAATTTCTAAATATGATT+GGG + chr8_4:25663254-25663273 None:intergenic 20.0%
!! TTCCAATTTCTAAATATGAT+TGG + chr8_4:25663255-25663274 None:intergenic 20.0%
!! ATCATATTTAGAAATTGGAA+CGG - chr8_4:25663255-25663274 Msa1320820:intron 20.0%
!! TTCTTGTAGTTATTACATTT+AGG - chr8_4:25663412-25663431 Msa1320820:intron 20.0%
!!! ATCCAGAAATTTTAATAAGT+GGG - chr8_4:25663607-25663626 Msa1320820:intron 20.0%
!! AAATATGTATGATAAAATCC+TGG + chr8_4:25663778-25663797 None:intergenic 20.0%
!! TAAGATGTTAACAAAATTCA+AGG + chr8_4:25663880-25663899 None:intergenic 20.0%
!!! CAAAATGAAATTTTTCAAGT+AGG + chr8_4:25664429-25664448 None:intergenic 20.0%
!!! AAATCCATGTTTTTGAATTA+AGG + chr8_4:25664452-25664471 None:intergenic 20.0%
!! GAATTCAAGGTTTAAAAAAA+TGG + chr8_4:25664477-25664496 None:intergenic 20.0%
!!! TTTTTTAAACCTTGAATTCA+TGG - chr8_4:25664478-25664497 Msa1320820:intron 20.0%
!! TATTTATTCTACAAACAACT+TGG - chr8_4:25664519-25664538 Msa1320820:intron 20.0%
!! TCTAATATTAAATTATGCTC+CGG + chr8_4:25664586-25664605 None:intergenic 20.0%
!!! GGCTATATTTCAATTTTTTT+AGG - chr8_4:25665336-25665355 Msa1320820:five_prime_UTR 20.0%
!!! CTTTTTTCATTTTTACCTTC+TGG - chr8_4:25657203-25657222 Msa1320820:three_prime_UTR 25.0%
! CAAAAAGGCTTATTATGTTA+AGG - chr8_4:25657433-25657452 Msa1320820:three_prime_UTR 25.0%
! CAAAAAGGCTTATTATGTTA+AGG - chr8_4:25657433-25657452 Msa1320820:three_prime_UTR 25.0%
!! GATTTGGAGAACTTTTTAAA+TGG - chr8_4:25657620-25657639 Msa1320820:intron 25.0%
! TGTTAATAAAGTTCAGTTGA+TGG + chr8_4:25657687-25657706 None:intergenic 25.0%
!!! TTCAAAAAAGTGTTCAATTG+TGG - chr8_4:25657735-25657754 Msa1320820:intron 25.0%
! GTTAATAATGTTCAAATTCG+TGG - chr8_4:25657757-25657776 Msa1320820:CDS 25.0%
!!! GTATCTATTTTGATACTTCT+AGG + chr8_4:25657870-25657889 None:intergenic 25.0%
!! CTTTTTATACTTTCAGTTAC+AGG + chr8_4:25657914-25657933 None:intergenic 25.0%
! GCAAACTAGATCAATAATTA+TGG + chr8_4:25658045-25658064 None:intergenic 25.0%
!!! TTCTTCTACTTACTTTTGAT+CGG - chr8_4:25658175-25658194 Msa1320820:intron 25.0%
! TACTATTTCAACGACTAAAT+TGG + chr8_4:25658219-25658238 None:intergenic 25.0%
!!! GAGAATGTTGTTATTTTCAA+GGG + chr8_4:25658259-25658278 None:intergenic 25.0%
!!! TGAGAATGTTGTTATTTTCA+AGG + chr8_4:25658260-25658279 None:intergenic 25.0%
!! TAGAATTTCGTTAGTTTCAA+GGG - chr8_4:25658403-25658422 Msa1320820:intron 25.0%
! AGTGCAATCTTCTAAATAAT+GGG + chr8_4:25658452-25658471 None:intergenic 25.0%
! AAGTGCAATCTTCTAAATAA+TGG + chr8_4:25658453-25658472 None:intergenic 25.0%
! TCAGAAACAGTAATAAATGT+AGG - chr8_4:25658821-25658840 Msa1320820:intron 25.0%
! CAGAAACAGTAATAAATGTA+GGG - chr8_4:25658822-25658841 Msa1320820:intron 25.0%
!! ACAGTGAATATTGCATATTT+TGG + chr8_4:25659170-25659189 None:intergenic 25.0%
!!! AAGCTTTAAAAGTGTTACTT+AGG + chr8_4:25659272-25659291 None:intergenic 25.0%
! CTGATATCAGGTATTTAAAT+TGG + chr8_4:25659341-25659360 None:intergenic 25.0%
!!! TATATTTTACAGGCCATTTT+CGG + chr8_4:25659377-25659396 None:intergenic 25.0%
! AAAATGGCCTGTAAAATATA+GGG - chr8_4:25659377-25659396 Msa1320820:intron 25.0%
! ATTGAAACAAACACTATGTT+GGG + chr8_4:25659548-25659567 None:intergenic 25.0%
! TATTGAAACAAACACTATGT+TGG + chr8_4:25659549-25659568 None:intergenic 25.0%
! TACTTGGTATGATTAGTATT+TGG + chr8_4:25659880-25659899 None:intergenic 25.0%
! AAAAAAATATGACATGCAAG+AGG - chr8_4:25659962-25659981 Msa1320820:intron 25.0%
!! ACCAAAGTATTCATTATAAG+GGG + chr8_4:25660123-25660142 None:intergenic 25.0%
!! GACCAAAGTATTCATTATAA+GGG + chr8_4:25660124-25660143 None:intergenic 25.0%
!! TGACCAAAGTATTCATTATA+AGG + chr8_4:25660125-25660144 None:intergenic 25.0%
! ATAGCAAATCAATGTCAATA+TGG - chr8_4:25660146-25660165 Msa1320820:intron 25.0%
! TAGCAAATCAATGTCAATAT+GGG - chr8_4:25660147-25660166 Msa1320820:intron 25.0%
!! TGCATTTATTATTTGAGACT+TGG - chr8_4:25660269-25660288 Msa1320820:CDS 25.0%
! GTAGATGATATAATCATTGT+TGG - chr8_4:25660492-25660511 Msa1320820:CDS 25.0%
! TAGTTGAAGATAAAGAACTT+GGG - chr8_4:25660561-25660580 Msa1320820:CDS 25.0%
!! GTAAAGGACATAATTCTTTT+GGG + chr8_4:25660646-25660665 None:intergenic 25.0%
!! AGTAAAGGACATAATTCTTT+TGG + chr8_4:25660647-25660666 None:intergenic 25.0%
! ATTATGTCCTTTACTTCTTA+AGG - chr8_4:25660652-25660671 Msa1320820:intron 25.0%
! AGAATTGACTAAGGAAAATT+TGG + chr8_4:25660733-25660752 None:intergenic 25.0%
!! AAATTTTCCTTAGTCAATTC+TGG - chr8_4:25660732-25660751 Msa1320820:intron 25.0%
! TATCAAATAAAGACCTGAAT+AGG - chr8_4:25660832-25660851 Msa1320820:intron 25.0%
! AACCAAATGAACCAAAATTT+AGG + chr8_4:25660922-25660941 None:intergenic 25.0%
!!! TACTTTTCCTTCTAAAGTTT+AGG - chr8_4:25661027-25661046 Msa1320820:intron 25.0%
! TAAACTTCCTAAACTTTAGA+AGG + chr8_4:25661037-25661056 None:intergenic 25.0%
! GCGTTAATTATAGTAGAATT+TGG - chr8_4:25661087-25661106 Msa1320820:intron 25.0%
! AATTATAGTAGAATTTGGGA+AGG - chr8_4:25661092-25661111 Msa1320820:intron 25.0%
! ATTATAGTAGAATTTGGGAA+GGG - chr8_4:25661093-25661112 Msa1320820:intron 25.0%
!! TCTAAATAGCTACGTTTTTA+AGG + chr8_4:25661189-25661208 None:intergenic 25.0%
!!! TAATTAGTTGGTAAATTGTC+AGG - chr8_4:25661635-25661654 Msa1320820:intron 25.0%
!!! GAATTTTTCGAAGAGTATAT+TGG - chr8_4:25661954-25661973 Msa1320820:intron 25.0%
! GAGAAGAAGAATTTACAAAA+TGG - chr8_4:25662245-25662264 Msa1320820:intron 25.0%
! ACTGTTGTATTATTGAATGA+TGG - chr8_4:25662332-25662351 Msa1320820:intron 25.0%
! TTCTTCATCCAGATAATAAA+TGG - chr8_4:25662580-25662599 Msa1320820:intron 25.0%
! TATTAGGATTCTTATTGTGT+TGG - chr8_4:25662774-25662793 Msa1320820:intron 25.0%
! ATTAGGATTCTTATTGTGTT+GGG - chr8_4:25662775-25662794 Msa1320820:intron 25.0%
! CATAAAAATCACTCAACATT+GGG + chr8_4:25662854-25662873 None:intergenic 25.0%
! ACATAAAAATCACTCAACAT+TGG + chr8_4:25662855-25662874 None:intergenic 25.0%
! AGTTAATACATTGACATGTA+TGG + chr8_4:25662930-25662949 None:intergenic 25.0%
!!! AAATTTTGATCTAATCTCAC+CGG - chr8_4:25662964-25662983 Msa1320820:intron 25.0%
! AAACAGACCTTCTATATAAT+TGG + chr8_4:25662996-25663015 None:intergenic 25.0%
!! TTATATAGAAGGTCTGTTTT+TGG - chr8_4:25662997-25663016 Msa1320820:intron 25.0%
!!! TATATAGAAGGTCTGTTTTT+GGG - chr8_4:25662998-25663017 Msa1320820:intron 25.0%
!! TCATGATACTATCTATGTTT+TGG + chr8_4:25663092-25663111 None:intergenic 25.0%
! ACATAGATAGTATCATGATA+TGG - chr8_4:25663094-25663113 Msa1320820:intron 25.0%
!! ATTTGAAGATTTTGTGCAAA+TGG - chr8_4:25663169-25663188 Msa1320820:intron 25.0%
! TCCCAATCATATTTAGAAAT+TGG - chr8_4:25663250-25663269 Msa1320820:intron 25.0%
!!! TATTTTTATGCTCTAGTTTG+AGG - chr8_4:25663312-25663331 Msa1320820:intron 25.0%
!!! ATTTTTATGCTCTAGTTTGA+GGG - chr8_4:25663313-25663332 Msa1320820:intron 25.0%
! AGCTTATTTAGAAAAGGAAA+AGG + chr8_4:25663485-25663504 None:intergenic 25.0%
!!! GATCCAGAAATTTTAATAAG+TGG - chr8_4:25663606-25663625 Msa1320820:intron 25.0%
!!! TCCAGAAATTTTAATAAGTG+GGG - chr8_4:25663608-25663627 Msa1320820:intron 25.0%
!! CTTTTGAATTACATATCTAC+TGG + chr8_4:25663755-25663774 None:intergenic 25.0%
!! GTGAACAAACAATTTTTCTA+AGG + chr8_4:25663839-25663858 None:intergenic 25.0%
!! CTTACATTATTTTCAGCTTT+TGG - chr8_4:25663896-25663915 Msa1320820:intron 25.0%
! AATGACATTAATCTTCCATA+AGG + chr8_4:25664278-25664297 None:intergenic 25.0%
!!! CGAGTTTAATTTTTAAGCTA+TGG + chr8_4:25664358-25664377 None:intergenic 25.0%
! TTTGCCTTAATTCAAAAACA+TGG - chr8_4:25664445-25664464 Msa1320820:intron 25.0%
!!! ATACTCTTGTTATTTTTCTC+AGG - chr8_4:25664641-25664660 Msa1320820:intron 25.0%
! TACAATAGAAGAAAGAAACA+GGG + chr8_4:25665044-25665063 None:intergenic 25.0%
! TTACAATAGAAGAAAGAAAC+AGG + chr8_4:25665045-25665064 None:intergenic 25.0%
! AATGAAATAGGAATTTAGGA+TGG + chr8_4:25665235-25665254 None:intergenic 25.0%
! ATCCTAAATTCCTATTTCAT+TGG - chr8_4:25665234-25665253 Msa1320820:intron 25.0%
! TCCTAAATTCCTATTTCATT+GGG - chr8_4:25665235-25665254 Msa1320820:intron 25.0%
!!! TTCAATTTTTTTAGGTCAAG+TGG - chr8_4:25665344-25665363 Msa1320820:five_prime_UTR 25.0%
TCCTCTCAATTTCTTAAAGT+TGG - chr8_4:25657177-25657196 Msa1320820:three_prime_UTR 30.0%
! TCCAACTTTAAGAAATTGAG+AGG + chr8_4:25657181-25657200 None:intergenic 30.0%
GAAAGTGAAAAAGATGATGA+AGG + chr8_4:25657258-25657277 None:intergenic 30.0%
GATATCACAAAAAATGGTGA+AGG - chr8_4:25657355-25657374 Msa1320820:three_prime_UTR 30.0%
ACTGCTTACTATGATACATT+AGG - chr8_4:25657380-25657399 Msa1320820:three_prime_UTR 30.0%
GATTTGAAGATGTGAGTATT+TGG - chr8_4:25657572-25657591 Msa1320820:CDS 30.0%
TGGTTAATGAGTTATGAAGT+AGG - chr8_4:25657777-25657796 Msa1320820:CDS 30.0%
GGTTAATGAGTTATGAAGTA+GGG - chr8_4:25657778-25657797 Msa1320820:CDS 30.0%
CAGGCATGACAAAATTATTA+GGG + chr8_4:25657895-25657914 None:intergenic 30.0%
ACAGGCATGACAAAATTATT+AGG + chr8_4:25657896-25657915 None:intergenic 30.0%
AACATAAGCGCATGATTAAA+GGG + chr8_4:25658099-25658118 None:intergenic 30.0%
AAACATAAGCGCATGATTAA+AGG + chr8_4:25658100-25658119 None:intergenic 30.0%
GTTTGTGTGAATTGTAAGTT+AGG - chr8_4:25658135-25658154 Msa1320820:intron 30.0%
TGTAAGTTAGGTTAATGAAC+TGG - chr8_4:25658147-25658166 Msa1320820:intron 30.0%
GTAAGTTAGGTTAATGAACT+GGG - chr8_4:25658148-25658167 Msa1320820:intron 30.0%
AAACTAACGAAATTCTACAG+TGG + chr8_4:25658400-25658419 None:intergenic 30.0%
! GTAGAATTTCGTTAGTTTCA+AGG - chr8_4:25658402-25658421 Msa1320820:intron 30.0%
!! AATAATGGGTGAATAGAAGT+CGG + chr8_4:25658438-25658457 None:intergenic 30.0%
AAAATGGAAGAAGGTTAGAA+GGG + chr8_4:25658640-25658659 None:intergenic 30.0%
TAAAATGGAAGAAGGTTAGA+AGG + chr8_4:25658641-25658660 None:intergenic 30.0%
AACAATTCTTGCCTGTAAAA+TGG + chr8_4:25658656-25658675 None:intergenic 30.0%
AGTATTATGAAGCCAAAACA+TGG + chr8_4:25658742-25658761 None:intergenic 30.0%
AGCATATGACAAAAATGGAA+AGG - chr8_4:25658978-25658997 Msa1320820:intron 30.0%
!! AATTAGCTTTCAGTCATGTA+AGG + chr8_4:25659031-25659050 None:intergenic 30.0%
! AGATAAGGTTCACCATTTTA+TGG + chr8_4:25659084-25659103 None:intergenic 30.0%
AGACATTAAACAGCTAGATA+AGG + chr8_4:25659099-25659118 None:intergenic 30.0%
ATTATTAGACAGATTGAAGC+TGG - chr8_4:25659142-25659161 Msa1320820:intron 30.0%
! TGTTCCTTTCCTGATTTTAT+TGG - chr8_4:25659204-25659223 Msa1320820:intron 30.0%
! GTTCCTTTCCTGATTTTATT+GGG - chr8_4:25659205-25659224 Msa1320820:intron 30.0%
! CCTTACAAGCTAATTTTGTA+GGG - chr8_4:25659304-25659323 Msa1320820:intron 30.0%
!! ATATTTTACAGGCCATTTTC+GGG + chr8_4:25659376-25659395 None:intergenic 30.0%
GAAAATGGCCTGTAAAATAT+AGG - chr8_4:25659376-25659395 Msa1320820:intron 30.0%
CACTATGTTGGGAAAATAAT+GGG + chr8_4:25659537-25659556 None:intergenic 30.0%
ACACTATGTTGGGAAAATAA+TGG + chr8_4:25659538-25659557 None:intergenic 30.0%
AGTGTTTGTTTCAATACAAG+TGG - chr8_4:25659553-25659572 Msa1320820:intron 30.0%
AGTTTCCACAAAATTTGGTT+AGG + chr8_4:25659634-25659653 None:intergenic 30.0%
CAAGAAGTTTCCACAAAATT+TGG + chr8_4:25659639-25659658 None:intergenic 30.0%
! AGCTATCAAACTTTTAGTAG+AGG - chr8_4:25659854-25659873 Msa1320820:intron 30.0%
TTTCCGATGCAATACAAAAT+GGG + chr8_4:25659945-25659964 None:intergenic 30.0%
! TTTTCCGATGCAATACAAAA+TGG + chr8_4:25659946-25659965 None:intergenic 30.0%
GTATTCATTATAAGGGGTTT+GGG + chr8_4:25660117-25660136 None:intergenic 30.0%
AGTATTCATTATAAGGGGTT+TGG + chr8_4:25660118-25660137 None:intergenic 30.0%
ACCCCTTATAATGAATACTT+TGG - chr8_4:25660119-25660138 Msa1320820:intron 30.0%
! TATTATTTGAGACTTGGAGT+AGG - chr8_4:25660275-25660294 Msa1320820:CDS 30.0%
AAACTACTTGATGCCATATA+AGG + chr8_4:25660372-25660391 None:intergenic 30.0%
CAAGTTCTTTATCTTCAACT+AGG + chr8_4:25660562-25660581 None:intergenic 30.0%
CTAGTTGAAGATAAAGAACT+TGG - chr8_4:25660560-25660579 Msa1320820:CDS 30.0%
GAAAGCTGAAATATTTCCTT+GGG - chr8_4:25660583-25660602 Msa1320820:intron 30.0%
! CTTTATTTGATACCTATGCT+TGG + chr8_4:25660824-25660843 None:intergenic 30.0%
! TTTTGAACTGTCCTATAAAG+TGG - chr8_4:25660878-25660897 Msa1320820:intron 30.0%
!!! GTCCTAAATTTTGGTTCATT+TGG - chr8_4:25660917-25660936 Msa1320820:intron 30.0%
TGGTTCAATACCAACTATAA+CGG - chr8_4:25660937-25660956 Msa1320820:intron 30.0%
!!! CTCTTTTTCAGGCAATTTAT+GGG - chr8_4:25660975-25660994 Msa1320820:intron 30.0%
!! ACTCCCTTTTAAAAAGAAGA+GGG + chr8_4:25661008-25661027 None:intergenic 30.0%
!! TACTCCCTTTTAAAAAGAAG+AGG + chr8_4:25661009-25661028 None:intergenic 30.0%
TACAGAGAAAAAGCTGATAA+GGG + chr8_4:25661254-25661273 None:intergenic 30.0%
AGATGACTTATCCGAAAATT+GGG - chr8_4:25661396-25661415 Msa1320820:intron 30.0%
! TGAATTTTCACAATCAGGAA+GGG + chr8_4:25661503-25661522 None:intergenic 30.0%
! ATGAATTTTCACAATCAGGA+AGG + chr8_4:25661504-25661523 None:intergenic 30.0%
TTCCTGATTGTGAAAATTCA+TGG - chr8_4:25661503-25661522 Msa1320820:intron 30.0%
GAACCCAATAGTTAATTAGT+TGG - chr8_4:25661623-25661642 Msa1320820:intron 30.0%
!! ACTGTATTTGGAATGCTTTT+TGG - chr8_4:25661927-25661946 Msa1320820:intron 30.0%
TTTAGCATCTATAGAAGTTG+AGG - chr8_4:25661995-25662014 Msa1320820:intron 30.0%
!! ACAGCTTTAAATACCAAAGT+AGG + chr8_4:25662131-25662150 None:intergenic 30.0%
CAGTAGAATTACAGAACAAA+CGG + chr8_4:25662316-25662335 None:intergenic 30.0%
TAATGGCCAATTAAAACACA+CGG + chr8_4:25662437-25662456 None:intergenic 30.0%
CTATCAGTAGTTGGATTATT+AGG - chr8_4:25662758-25662777 Msa1320820:intron 30.0%
! GAGTGATTTTTATGTACTCT+TGG - chr8_4:25662860-25662879 Msa1320820:intron 30.0%
AATAAGTACACAAGTGATTG+AGG + chr8_4:25663120-25663139 None:intergenic 30.0%
CAATCACTTGTGTACTTATT+TGG - chr8_4:25663120-25663139 Msa1320820:intron 30.0%
AACTGTTTGAACAATTGTCT+TGG + chr8_4:25663146-25663165 None:intergenic 30.0%
TGGCATTTGTATGTGATAAA+TGG - chr8_4:25663189-25663208 Msa1320820:intron 30.0%
GGCATTTGTATGTGATAAAT+GGG - chr8_4:25663190-25663209 Msa1320820:intron 30.0%
ATATTTAGAAATTGGAACGG+AGG - chr8_4:25663258-25663277 Msa1320820:intron 30.0%
TAGTTATTACATTTAGGCTC+AGG - chr8_4:25663418-25663437 Msa1320820:intron 30.0%
! AAGTATGATCGAGTTGTTAT+AGG - chr8_4:25663529-25663548 Msa1320820:CDS 30.0%
GCTAAACTTTACAACCAAAA+TGG - chr8_4:25663557-25663576 Msa1320820:intron 30.0%
ACCCCACTTATTAAAATTTC+TGG + chr8_4:25663612-25663631 None:intergenic 30.0%
AGATATGTAATTCAAAAGCC+AGG - chr8_4:25663757-25663776 Msa1320820:intron 30.0%
AGAGTAATAAAACTGTTGAG+AGG + chr8_4:25663806-25663825 None:intergenic 30.0%
AAAAATTGTTTGTTCACTCC+TGG - chr8_4:25663842-25663861 Msa1320820:intron 30.0%
TGTTAACAAAATTCAAGGAG+TGG + chr8_4:25663875-25663894 None:intergenic 30.0%
!! ATTATTTTCAGCTTTTGGAG+AGG - chr8_4:25663901-25663920 Msa1320820:intron 30.0%
ATGCCATGATTAATTCCTTA+TGG - chr8_4:25664260-25664279 Msa1320820:intron 30.0%
CTTCCATAAGGAATTAATCA+TGG + chr8_4:25664266-25664285 None:intergenic 30.0%
!!! ATGCTGTTTTCTTTTATCTC+AGG - chr8_4:25664546-25664565 Msa1320820:intron 30.0%
! CAAAATGAAGCATTCTTAGA+TGG + chr8_4:25664849-25664868 None:intergenic 30.0%
! AATGCTTCATTTTGCTTCTT+AGG - chr8_4:25664855-25664874 Msa1320820:intron 30.0%
! ATGCTTCATTTTGCTTCTTA+GGG - chr8_4:25664856-25664875 Msa1320820:intron 30.0%
TGAACAAGATGATTATGATG+AGG + chr8_4:25664950-25664969 None:intergenic 30.0%
! AAATTTCATTTAGAGCCAGA+AGG + chr8_4:25665018-25665037 None:intergenic 30.0%
!! TTTCACTTTGACTTGTGAAT+TGG - chr8_4:25665124-25665143 Msa1320820:exon 30.0%
!! TATTGCTTTTGTTGTGTGTA+AGG - chr8_4:25665315-25665334 Msa1320820:five_prime_UTR 30.0%
TAGGTAGCTGTTTGAACATA+AGG + chr8_4:25657101-25657120 None:intergenic 35.0%
! ACGACAACGTTTTTGTCATA+CGG - chr8_4:25657131-25657150 Msa1320820:three_prime_UTR 35.0%
ATCTGCTGCAGATATCAAAA+AGG - chr8_4:25657418-25657437 Msa1320820:three_prime_UTR 35.0%
!! TTATGTTTTTGCTGGTGACT+GGG - chr8_4:25658112-25658131 Msa1320820:intron 35.0%
ATCGGATGTGTATAGATGAA+TGG - chr8_4:25658193-25658212 Msa1320820:CDS 35.0%
TTTAGTCCCTGAACTTATCT+TGG - chr8_4:25658335-25658354 Msa1320820:intron 35.0%
GTTCATCCAAGATAAGTTCA+GGG + chr8_4:25658344-25658363 None:intergenic 35.0%
AGTTCATCCAAGATAAGTTC+AGG + chr8_4:25658345-25658364 None:intergenic 35.0%
! CTAACCTTCTTCCATTTTAC+AGG - chr8_4:25658642-25658661 Msa1320820:intron 35.0%
TTCACCCTGATAAAAATCCT+GGG - chr8_4:25658674-25658693 Msa1320820:intron 35.0%
! TGAAAATTTTCTGCAGCCTT+GGG + chr8_4:25658703-25658722 None:intergenic 35.0%
TGTAGGGATATCTATACCTT+TGG - chr8_4:25658838-25658857 Msa1320820:intron 35.0%
GTAGGGATATCTATACCTTT+GGG - chr8_4:25658839-25658858 Msa1320820:intron 35.0%
TAGGGATATCTATACCTTTG+GGG - chr8_4:25658840-25658859 Msa1320820:intron 35.0%
AAATAGATAGAGAACCCCAA+AGG + chr8_4:25658857-25658876 None:intergenic 35.0%
CGTGAAGCATATGACAAAAA+TGG - chr8_4:25658973-25658992 Msa1320820:intron 35.0%
AGCAATGAAGCTCCATAAAA+TGG - chr8_4:25659069-25659088 Msa1320820:intron 35.0%
ACACCCAATAAAATCAGGAA+AGG + chr8_4:25659211-25659230 None:intergenic 35.0%
! TCCTGATTTTATTGGGTGTT+AGG - chr8_4:25659212-25659231 Msa1320820:intron 35.0%
! CCTGATTTTATTGGGTGTTA+GGG - chr8_4:25659213-25659232 Msa1320820:intron 35.0%
! CTGATTTTATTGGGTGTTAG+GGG - chr8_4:25659214-25659233 Msa1320820:intron 35.0%
GTTACTTAGGCAAAATCTCT+AGG + chr8_4:25659259-25659278 None:intergenic 35.0%
!! CAAAATTAGCTTGTAAGGCA+AGG + chr8_4:25659302-25659321 None:intergenic 35.0%
! GCCTTACAAGCTAATTTTGT+AGG - chr8_4:25659303-25659322 Msa1320820:intron 35.0%
!! CCCTACAAAATTAGCTTGTA+AGG + chr8_4:25659307-25659326 None:intergenic 35.0%
! TACAAGCTAATTTTGTAGGG+TGG - chr8_4:25659307-25659326 Msa1320820:intron 35.0%
!! TAATTTTGTAGGGTGGACTT+AGG - chr8_4:25659314-25659333 Msa1320820:intron 35.0%
!! CAAAGCACCCTATATTTTAC+AGG + chr8_4:25659387-25659406 None:intergenic 35.0%
! CTGTAAAATATAGGGTGCTT+TGG - chr8_4:25659385-25659404 Msa1320820:intron 35.0%
! AAAATATAGGGTGCTTTGGA+AGG - chr8_4:25659389-25659408 Msa1320820:intron 35.0%
GGAGAGAAAAATGATACACA+TGG + chr8_4:25659449-25659468 None:intergenic 35.0%
!! ATGTTGGGAAAATAATGGGT+GGG + chr8_4:25659533-25659552 None:intergenic 35.0%
! TATGTTGGGAAAATAATGGG+TGG + chr8_4:25659534-25659553 None:intergenic 35.0%
! GTAGACCTAACCAAATTTTG+TGG - chr8_4:25659626-25659645 Msa1320820:intron 35.0%
!! ATGGAAAGTATTCACAAGTC+TGG + chr8_4:25659820-25659839 None:intergenic 35.0%
! TAGCTCATAGCTCTACATAA+TGG + chr8_4:25659839-25659858 None:intergenic 35.0%
! TACCCCATTTTGTATTGCAT+CGG - chr8_4:25659939-25659958 Msa1320820:intron 35.0%
TTCCGATGCAATACAAAATG+GGG + chr8_4:25659944-25659963 None:intergenic 35.0%
ATATGACATGCAAGAGGATA+TGG - chr8_4:25659968-25659987 Msa1320820:intron 35.0%
! CAAAATGTGTTGCTAAAGAG+AGG + chr8_4:25660218-25660237 None:intergenic 35.0%
! CTCTCTTTAGCAACACATTT+TGG - chr8_4:25660216-25660235 Msa1320820:CDS 35.0%
CTTGGAGTAGGAAGAATATA+TGG - chr8_4:25660287-25660306 Msa1320820:CDS 35.0%
! ATAAAGAGAGTATGATCCCA+AGG + chr8_4:25660435-25660454 None:intergenic 35.0%
GGAAAGCTGAAATATTTCCT+TGG - chr8_4:25660582-25660601 Msa1320820:intron 35.0%
GAAATATTTCCTTGGGATAG+AGG - chr8_4:25660590-25660609 Msa1320820:intron 35.0%
! AGACGAGTTGTCCTAAATTT+TGG - chr8_4:25660908-25660927 Msa1320820:intron 35.0%
TTTGGTTGAACCGTTATAGT+TGG + chr8_4:25660950-25660969 None:intergenic 35.0%
! ACCAAAATGACCTCTTTTTC+AGG - chr8_4:25660964-25660983 Msa1320820:intron 35.0%
CCATAAATTGCCTGAAAAAG+AGG + chr8_4:25660977-25660996 None:intergenic 35.0%
!!! CCTCTTTTTCAGGCAATTTA+TGG - chr8_4:25660974-25660993 Msa1320820:intron 35.0%
!!! TTTTTCAGGCAATTTATGGG+TGG - chr8_4:25660978-25660997 Msa1320820:intron 35.0%
! ATCCCCCTCTTCTTTTTAAA+AGG - chr8_4:25661001-25661020 Msa1320820:intron 35.0%
!! TCCCCCTCTTCTTTTTAAAA+GGG - chr8_4:25661002-25661021 Msa1320820:intron 35.0%
!! TCCCTTTTAAAAAGAAGAGG+GGG + chr8_4:25661006-25661025 None:intergenic 35.0%
!! CTCCCTTTTAAAAAGAAGAG+GGG + chr8_4:25661007-25661026 None:intergenic 35.0%
AAACGTAGCTATTTAGACCA+AGG - chr8_4:25661192-25661211 Msa1320820:intron 35.0%
CTACAGAGAAAAAGCTGATA+AGG + chr8_4:25661255-25661274 None:intergenic 35.0%
CATTGGATACACTCTACTAT+GGG + chr8_4:25661319-25661338 None:intergenic 35.0%
ACATTGGATACACTCTACTA+TGG + chr8_4:25661320-25661339 None:intergenic 35.0%
! CAATTTTCGGATAAGTCATC+TGG + chr8_4:25661397-25661416 None:intergenic 35.0%
CAGATGACTTATCCGAAAAT+TGG - chr8_4:25661395-25661414 Msa1320820:intron 35.0%
ATCTAGGTAATCTTGTAGCT+AGG + chr8_4:25661431-25661450 None:intergenic 35.0%
TGTCATCGTCACATAAATCT+AGG + chr8_4:25661447-25661466 None:intergenic 35.0%
ATTTATGTGACGATGACAAG+AGG - chr8_4:25661449-25661468 Msa1320820:intron 35.0%
TTTATGTGACGATGACAAGA+GGG - chr8_4:25661450-25661469 Msa1320820:intron 35.0%
! TGCCATGAATTTTCACAATC+AGG + chr8_4:25661508-25661527 None:intergenic 35.0%
!! AAACGCACATGCTTTAAAGA+AGG - chr8_4:25661576-25661595 Msa1320820:intron 35.0%
!! AACGCACATGCTTTAAAGAA+GGG - chr8_4:25661577-25661596 Msa1320820:intron 35.0%
ATTAACTATTGGGTTCCCTT+GGG + chr8_4:25661619-25661638 None:intergenic 35.0%
AATTAACTATTGGGTTCCCT+TGG + chr8_4:25661620-25661639 None:intergenic 35.0%
!! GTTGGTAAATTGTCAGGTTT+TGG - chr8_4:25661641-25661660 Msa1320820:intron 35.0%
ACTATTTGCATCATAGCAGT+AGG - chr8_4:25661666-25661685 Msa1320820:intron 35.0%
! TGAACATTTTGCAAGGAAGT+AGG - chr8_4:25661714-25661733 Msa1320820:intron 35.0%
! AATACAATTGGTAACACCAG+AGG + chr8_4:25661758-25661777 None:intergenic 35.0%
TGTAAGAGAATGTCTGAGTT+TGG - chr8_4:25661856-25661875 Msa1320820:intron 35.0%
GCATTCCAAATACAGTTGTA+GGG + chr8_4:25661923-25661942 None:intergenic 35.0%
AGCATTCCAAATACAGTTGT+AGG + chr8_4:25661924-25661943 None:intergenic 35.0%
! ATTTTCTGCATACGAACTTG+AGG + chr8_4:25662035-25662054 None:intergenic 35.0%
!!! TGCTCTAATGCTGTTTTTCA+TGG - chr8_4:25662090-25662109 Msa1320820:intron 35.0%
CAAAGTAGGAAACATTACAG+TGG + chr8_4:25662117-25662136 None:intergenic 35.0%
CACTGTAATGTTTCCTACTT+TGG - chr8_4:25662115-25662134 Msa1320820:intron 35.0%
! TTTCCTACTGTTTTACCTGT+AGG - chr8_4:25662150-25662169 Msa1320820:intron 35.0%
ATACCTACAGGTAAAACAGT+AGG + chr8_4:25662156-25662175 None:intergenic 35.0%
! TACTGTTTTACCTGTAGGTA+TGG - chr8_4:25662155-25662174 Msa1320820:intron 35.0%
AAGAGAACAGAAGCTGATAT+CGG - chr8_4:25662186-25662205 Msa1320820:intron 35.0%
CATCAACAAATGGTTGCAAA+CGG + chr8_4:25662222-25662241 None:intergenic 35.0%
AATGGCCAATTAAAACACAC+GGG + chr8_4:25662436-25662455 None:intergenic 35.0%
! CCATTAAGTGAGACCTTTTT+GGG - chr8_4:25662451-25662470 Msa1320820:intron 35.0%
GATGCATCATAACAAAGTTC+AGG + chr8_4:25662553-25662572 None:intergenic 35.0%
!! CATATTTTGAGTCCTACTGA+CGG - chr8_4:25662686-25662705 Msa1320820:intron 35.0%
TAATCCAACTACTGATAGAC+AGG + chr8_4:25662756-25662775 None:intergenic 35.0%
TGGGTTTCATGATCTATTCT+TGG + chr8_4:25662835-25662854 None:intergenic 35.0%
! TCTATATAATTGGTCTGCAC+CGG + chr8_4:25662986-25663005 None:intergenic 35.0%
GTGCAGACCAATTATATAGA+AGG - chr8_4:25662986-25663005 Msa1320820:intron 35.0%
TATTACATTTAGGCTCAGGT+TGG - chr8_4:25663422-25663441 Msa1320820:intron 35.0%
ATTACATTTAGGCTCAGGTT+GGG - chr8_4:25663423-25663442 Msa1320820:intron 35.0%
! TTTGCTTTCGTCTTCCATTT+TGG + chr8_4:25663574-25663593 None:intergenic 35.0%
CGAAAGCAAAGAATAAGTGA+CGG - chr8_4:25663584-25663603 Msa1320820:intron 35.0%
CAAAATTCAAGGAGTGGAAA+AGG + chr8_4:25663869-25663888 None:intergenic 35.0%
ATAACCGATTGTATGTAGCA+TGG + chr8_4:25663927-25663946 None:intergenic 35.0%
AAGAGCTTGGAAAGGATATT+CGG - chr8_4:25663969-25663988 Msa1320820:intron 35.0%
! TTGAAATGTTTTCCCAGAGT+TGG - chr8_4:25664101-25664120 Msa1320820:intron 35.0%
TAGAACTTAACTGCTTCTGT+AGG - chr8_4:25664139-25664158 Msa1320820:intron 35.0%
GAAAGCTCTTGAAGATAAGA+AGG - chr8_4:25664237-25664256 Msa1320820:intron 35.0%
!!! TTTTTCAAGTAGGCTATACG+AGG + chr8_4:25664419-25664438 None:intergenic 35.0%
! CTTTTATCTCAGGAAGCTTA+CGG - chr8_4:25664556-25664575 Msa1320820:intron 35.0%
GGATATCAACAAAACGTAAC+AGG + chr8_4:25664828-25664847 None:intergenic 35.0%
!! TTGAGTTGATCATGTTCTTG+TGG - chr8_4:25664992-25665011 Msa1320820:intron 35.0%
CTAGAAACTTACATGCAGAA+TGG + chr8_4:25665160-25665179 None:intergenic 35.0%
GCCCAATGAAATAGGAATTT+AGG + chr8_4:25665239-25665258 None:intergenic 35.0%
!! TGGCTAGAGTTTCACTTTTA+AGG - chr8_4:25665372-25665391 Msa1320820:five_prime_UTR 35.0%
!!! TCACTTTTAAGGTGAACATG+TGG - chr8_4:25665383-25665402 Msa1320820:five_prime_UTR 35.0%
!! CGTTGTCGTTTGAAAGTACT+AGG + chr8_4:25657120-25657139 None:intergenic 40.0%
ATACGGATCCACAAGAAATC+TGG - chr8_4:25657148-25657167 Msa1320820:three_prime_UTR 40.0%
GAAGATTGCCAGATTTCTTG+TGG + chr8_4:25657159-25657178 None:intergenic 40.0%
! GATGAAGGAGTATACTAACC+AGG + chr8_4:25657243-25657262 None:intergenic 40.0%
AGTAGGGAGACTCTAACATT+CGG - chr8_4:25657794-25657813 Msa1320820:CDS 40.0%
!! GAAAGCATCGGAATCAGATA+CGG + chr8_4:25657827-25657846 None:intergenic 40.0%
AGGTTCTATATCGCATGTCT+CGG + chr8_4:25657850-25657869 None:intergenic 40.0%
CAGGCATGACAAGATCAATA+GGG + chr8_4:25657963-25657982 None:intergenic 40.0%
ACAGGCATGACAAGATCAAT+AGG + chr8_4:25657964-25657983 None:intergenic 40.0%
GTGAGCAAACTTTCAGTTAC+AGG + chr8_4:25657982-25658001 None:intergenic 40.0%
!! TCATGCGCTTATGTTTTTGC+TGG - chr8_4:25658104-25658123 Msa1320820:intron 40.0%
!! CTTATGTTTTTGCTGGTGAC+TGG - chr8_4:25658111-25658130 Msa1320820:intron 40.0%
!! TATGTTTTTGCTGGTGACTG+GGG - chr8_4:25658113-25658132 Msa1320820:intron 40.0%
GAAATTCTACAGTGGTCACT+AGG + chr8_4:25658392-25658411 None:intergenic 40.0%
TCCTGTAATAGATCTGCAAC+AGG - chr8_4:25658518-25658537 Msa1320820:CDS 40.0%
ACCTGTTGCAGATCTATTAC+AGG + chr8_4:25658522-25658541 None:intergenic 40.0%
CTTGCCTGTAAAATGGAAGA+AGG + chr8_4:25658649-25658668 None:intergenic 40.0%
GTTCACCCTGATAAAAATCC+TGG - chr8_4:25658673-25658692 Msa1320820:intron 40.0%
TCACCCTGATAAAAATCCTG+GGG - chr8_4:25658675-25658694 Msa1320820:intron 40.0%
! GATCCCCAGGATTTTTATCA+GGG + chr8_4:25658681-25658700 None:intergenic 40.0%
! CTGAAAATTTTCTGCAGCCT+TGG + chr8_4:25658704-25658723 None:intergenic 40.0%
! CAAGGCTGCAGAAAATTTTC+AGG - chr8_4:25658702-25658721 Msa1320820:intron 40.0%
TGACAAAAATGGAAAGGCAG+CGG - chr8_4:25658984-25659003 Msa1320820:intron 40.0%
CCCTAACACCCAATAAAATC+AGG + chr8_4:25659216-25659235 None:intergenic 40.0%
! ATTTTATTGGGTGTTAGGGG+TGG - chr8_4:25659217-25659236 Msa1320820:intron 40.0%
! TTTTATTGGGTGTTAGGGGT+GGG - chr8_4:25659218-25659237 Msa1320820:intron 40.0%
ACTCACATCACACTGATATC+AGG + chr8_4:25659353-25659372 None:intergenic 40.0%
TGTAACCACCTGCTGTAAAA+GGG + chr8_4:25659503-25659522 None:intergenic 40.0%
TCAAGTAGTTTCCCTGTACT+TGG - chr8_4:25660381-25660400 Msa1320820:intron 40.0%
TAGTTTCCCTGTACTTGGTT+TGG - chr8_4:25660386-25660405 Msa1320820:intron 40.0%
AGTTTCCCTGTACTTGGTTT+GGG - chr8_4:25660387-25660406 Msa1320820:intron 40.0%
GGAGATAAAGCTACCTTGTT+TGG + chr8_4:25660625-25660644 None:intergenic 40.0%
TCCTTTACTTCTTAAGGCGA+TGG - chr8_4:25660658-25660677 Msa1320820:intron 40.0%
CCTTTACTTCTTAAGGCGAT+GGG - chr8_4:25660659-25660678 Msa1320820:intron 40.0%
CTTAAGGCGATGGGTAAATT+TGG - chr8_4:25660668-25660687 Msa1320820:intron 40.0%
GCTTGGTATCTGTTTGAGAA+TGG + chr8_4:25660807-25660826 None:intergenic 40.0%
CTCAAACAGATACCAAGCAT+AGG - chr8_4:25660809-25660828 Msa1320820:intron 40.0%
AGTCATGTCTCAACCTATTC+AGG + chr8_4:25660848-25660867 None:intergenic 40.0%
! GCCTGAAAAAGAGGTCATTT+TGG + chr8_4:25660968-25660987 None:intergenic 40.0%
AGGAATTCTAGTCATGTACC+TGG + chr8_4:25661169-25661188 None:intergenic 40.0%
GTAGCTATTTAGACCAAGGA+CGG - chr8_4:25661196-25661215 Msa1320820:intron 40.0%
TGATAAGGGCCATAAAATGG+TGG + chr8_4:25661240-25661259 None:intergenic 40.0%
AGCTGATAAGGGCCATAAAA+TGG + chr8_4:25661243-25661262 None:intergenic 40.0%
CAAAGGCAGACATGAAACAT+TGG + chr8_4:25661336-25661355 None:intergenic 40.0%
CAATGTTTCATGTCTGCCTT+TGG - chr8_4:25661334-25661353 Msa1320820:intron 40.0%
TTCGGATAAGTCATCTGGTA+GGG + chr8_4:25661392-25661411 None:intergenic 40.0%
TTTCGGATAAGTCATCTGGT+AGG + chr8_4:25661393-25661412 None:intergenic 40.0%
TAATCTTGTAGCTAGGTCTG+TGG + chr8_4:25661424-25661443 None:intergenic 40.0%
! AAGCATGTGCGTTTTACACA+AGG + chr8_4:25661570-25661589 None:intergenic 40.0%
ATTTGCATCATAGCAGTAGG+TGG - chr8_4:25661669-25661688 Msa1320820:intron 40.0%
TTTGCATCATAGCAGTAGGT+GGG - chr8_4:25661670-25661689 Msa1320820:intron 40.0%
AGTCAAGAGTCAAATTCCTC+TGG - chr8_4:25661739-25661758 Msa1320820:intron 40.0%
TCTCTTACATGCTGTTAGAC+TGG + chr8_4:25661845-25661864 None:intergenic 40.0%
! TGGCATCTCTGGAAAACAAA+AGG + chr8_4:25661893-25661912 None:intergenic 40.0%
ATGGACCCTACAACTGTATT+TGG - chr8_4:25661915-25661934 Msa1320820:intron 40.0%
AGAAGTTGAGGAAGATTCAC+CGG - chr8_4:25662007-25662026 Msa1320820:intron 40.0%
TTTCTTTCTGCCATACCTAC+AGG + chr8_4:25662168-25662187 None:intergenic 40.0%
! CGTTTGCAACCATTTGTTGA+TGG - chr8_4:25662220-25662239 Msa1320820:intron 40.0%
GCTCGTAATCTTTCAAAAGC+TGG - chr8_4:25662280-25662299 Msa1320820:intron 40.0%
! GCCATTAAGTGAGACCTTTT+TGG - chr8_4:25662450-25662469 Msa1320820:intron 40.0%
CCCAAAAAGGTCTCACTTAA+TGG + chr8_4:25662454-25662473 None:intergenic 40.0%
ATTGGAGGTTTCCATACACA+AGG - chr8_4:25662478-25662497 Msa1320820:intron 40.0%
TTGGAGGTTTCCATACACAA+GGG - chr8_4:25662479-25662498 Msa1320820:intron 40.0%
! GTTGTACATTTTCCGTCAGT+AGG + chr8_4:25662701-25662720 None:intergenic 40.0%
AAGTCCTGTCTATCAGTAGT+TGG - chr8_4:25662749-25662768 Msa1320820:intron 40.0%
AACCACTAAACCATAACTCG+TGG - chr8_4:25662895-25662914 Msa1320820:intron 40.0%
GTTATGTTGTCCACGAGTTA+TGG + chr8_4:25662908-25662927 None:intergenic 40.0%
GGACTATCGTGATATGGATT+GGG + chr8_4:25663233-25663252 None:intergenic 40.0%
TGATTGGGACTATCGTGATA+TGG + chr8_4:25663239-25663258 None:intergenic 40.0%
TTGGGCTTCCACTTTATTAG+AGG + chr8_4:25663285-25663304 None:intergenic 40.0%
! GATACATACACTAGTCTGCT+TGG + chr8_4:25663733-25663752 None:intergenic 40.0%
TTATACGGTGTCCTTTGTCT+CGG + chr8_4:25664027-25664046 None:intergenic 40.0%
CCGTCACTTGTGACTTTATA+CGG + chr8_4:25664042-25664061 None:intergenic 40.0%
CCGTATAAAGTCACAAGTGA+CGG - chr8_4:25664039-25664058 Msa1320820:intron 40.0%
!! ATGTTTTCCCAGAGTTGGTT+TGG - chr8_4:25664106-25664125 Msa1320820:intron 40.0%
GAGCTCAAGAAGCTAAATCA+AGG - chr8_4:25664190-25664209 Msa1320820:intron 40.0%
TGGCATGAACCATGAATTCA+AGG + chr8_4:25664490-25664509 None:intergenic 40.0%
!! GCCAAAGCATTGAAACAGTT+GGG - chr8_4:25664708-25664727 Msa1320820:intron 40.0%
TCCCAACTGTTTCAATGCTT+TGG + chr8_4:25664712-25664731 None:intergenic 40.0%
GTGCAACCACATGATACAAA+CGG + chr8_4:25664789-25664808 None:intergenic 40.0%
!! TTTTGCTTCTTAGGGTGCTA+AGG - chr8_4:25664864-25664883 Msa1320820:intron 40.0%
! CTTGTTCAGTTTGCTCAGTA+TGG - chr8_4:25664962-25664981 Msa1320820:intron 40.0%
!! CTTACATGCAGAATGGACTA+TGG + chr8_4:25665153-25665172 None:intergenic 40.0%
ATTCCTATTTCATTGGGCAG+AGG - chr8_4:25665241-25665260 Msa1320820:intron 40.0%
TATCCTCTGCCCAATGAAAT+AGG + chr8_4:25665247-25665266 None:intergenic 40.0%
!!! TTTTAGGTCAAGTGGACTAG+TGG - chr8_4:25665352-25665371 Msa1320820:five_prime_UTR 40.0%
! GATTTTCGAAGCAACCCAGA+AGG + chr8_4:25657221-25657240 None:intergenic 45.0%
GGTTCTATATCGCATGTCTC+GGG + chr8_4:25657849-25657868 None:intergenic 45.0%
TGGAAGAAGGTTAGAAGGGA+GGG + chr8_4:25658636-25658655 None:intergenic 45.0%
ATGGAAGAAGGTTAGAAGGG+AGG + chr8_4:25658637-25658656 None:intergenic 45.0%
! GGATCCCCAGGATTTTTATC+AGG + chr8_4:25658682-25658701 None:intergenic 45.0%
TAAAAATCCTGGGGATCCCA+AGG - chr8_4:25658684-25658703 Msa1320820:intron 45.0%
! TGCACTACGAGTCCATGTTT+TGG - chr8_4:25658727-25658746 Msa1320820:intron 45.0%
TGGTATCTATACCAGCTGCT+TGG - chr8_4:25658916-25658935 Msa1320820:intron 45.0%
AGGATCGCTTAAAACCTGGT+AGG + chr8_4:25658947-25658966 None:intergenic 45.0%
TCTCAGGATCGCTTAAAACC+TGG + chr8_4:25658951-25658970 None:intergenic 45.0%
TCATATGCTTCACGCTTCTC+AGG + chr8_4:25658967-25658986 None:intergenic 45.0%
GCAAAATCTCTAGGCAATGC+GGG + chr8_4:25659250-25659269 None:intergenic 45.0%
GGCAAAATCTCTAGGCAATG+CGG + chr8_4:25659251-25659270 None:intergenic 45.0%
TGTGATGTGAGTCCCGAAAA+TGG - chr8_4:25659361-25659380 Msa1320820:intron 45.0%
TGACAGACTGAGAGAAAGAG+GGG + chr8_4:25659470-25659489 None:intergenic 45.0%
CTGACAGACTGAGAGAAAGA+GGG + chr8_4:25659471-25659490 None:intergenic 45.0%
TCTGACAGACTGAGAGAAAG+AGG + chr8_4:25659472-25659491 None:intergenic 45.0%
! CTTTCACTCCCTTTTACAGC+AGG - chr8_4:25659492-25659511 Msa1320820:intron 45.0%
GTGTAACCACCTGCTGTAAA+AGG + chr8_4:25659504-25659523 None:intergenic 45.0%
GTTGTTCAGCTGTTTGCGAT+AGG - chr8_4:25659768-25659787 Msa1320820:intron 45.0%
TTCACAAGTCTGGCATAGCA+AGG + chr8_4:25659810-25659829 None:intergenic 45.0%
! ACTCGTTGAGCTAGCTCTTA+GGG + chr8_4:25660079-25660098 None:intergenic 45.0%
TAAGAGCTAGCTCAACGAGT+GGG - chr8_4:25660079-25660098 Msa1320820:intron 45.0%
CTCTCAATTAGCAGCAGAGT+AGG - chr8_4:25660170-25660189 Msa1320820:intron 45.0%
TCAGCACATGACTTGACTGA+GGG - chr8_4:25660317-25660336 Msa1320820:intron 45.0%
CTTGACTGAGGGAAGGAAAA+AGG - chr8_4:25660328-25660347 Msa1320820:intron 45.0%
AACCACCCAAACCAAGTACA+GGG + chr8_4:25660395-25660414 None:intergenic 45.0%
ACTCAGGCTATGGTTTCCTT+GGG - chr8_4:25660416-25660435 Msa1320820:intron 45.0%
AGTAAGCAACCTCTATCCCA+AGG + chr8_4:25660602-25660621 None:intergenic 45.0%
GAGGTTGCTTACTCCAAACA+AGG - chr8_4:25660609-25660628 Msa1320820:intron 45.0%
CCCATCGCCTTAAGAAGTAA+AGG + chr8_4:25660662-25660681 None:intergenic 45.0%
GGTCGCAAACGACTTAAACT+AGG - chr8_4:25660689-25660708 Msa1320820:intron 45.0%
GCTCTGACCAGAATTGACTA+AGG + chr8_4:25660742-25660761 None:intergenic 45.0%
GTCAGAGCTCTTTGAGCAAA+CGG - chr8_4:25660754-25660773 Msa1320820:intron 45.0%
TCAGAGCTCTTTGAGCAAAC+GGG - chr8_4:25660755-25660774 Msa1320820:intron 45.0%
! GTCTAGAGAGGCCACTTTAT+AGG + chr8_4:25660892-25660911 None:intergenic 45.0%
TTAGGACAACTCGTCTAGAG+AGG + chr8_4:25660904-25660923 None:intergenic 45.0%
TCACAAGAAGAGAAGAGAGG+TGG - chr8_4:25661139-25661158 Msa1320820:intron 45.0%
! AAGTTGGCGCCACCATTTTA+TGG - chr8_4:25661228-25661247 Msa1320820:intron 45.0%
TTTCTCTGTAGAGTGCGTAG+AGG - chr8_4:25661264-25661283 Msa1320820:intron 45.0%
TTCTCTGTAGAGTGCGTAGA+GGG - chr8_4:25661265-25661284 Msa1320820:intron 45.0%
GGATACACTCTACTATGGGT+TGG + chr8_4:25661315-25661334 None:intergenic 45.0%
! TTCATGTCTGCCTTTGGAGA+AGG - chr8_4:25661340-25661359 Msa1320820:intron 45.0%
ACCAAAACAGCCTTCTCCAA+AGG + chr8_4:25661353-25661372 None:intergenic 45.0%
TAAGTCATCTGGTAGGGACT+GGG + chr8_4:25661386-25661405 None:intergenic 45.0%
ATAAGTCATCTGGTAGGGAC+TGG + chr8_4:25661387-25661406 None:intergenic 45.0%
! GGTCTGTGGTTCCCAATTTT+CGG + chr8_4:25661410-25661429 None:intergenic 45.0%
AAGCAGAGTTGCTGGTCAAA+TGG - chr8_4:25661473-25661492 Msa1320820:intron 45.0%
AGAAGGGTTGCTGAATTAGC+AGG - chr8_4:25661593-25661612 Msa1320820:intron 45.0%
! GTTTTCCAGAGATGCCATGA+TGG - chr8_4:25661896-25661915 Msa1320820:intron 45.0%
TACAGTTGTAGGGTCCATCA+TGG + chr8_4:25661913-25661932 None:intergenic 45.0%
TCTTCTCGGCCATCAACAAA+TGG + chr8_4:25662232-25662251 None:intergenic 45.0%
!!! GCCAACCCGTGTGTTTTAAT+TGG - chr8_4:25662428-25662447 Msa1320820:intron 45.0%
GCCAATTAAAACACACGGGT+TGG + chr8_4:25662432-25662451 None:intergenic 45.0%
!! GAGACCTTTTTGGGCACTAT+TGG - chr8_4:25662460-25662479 Msa1320820:intron 45.0%
!! ACCTTTTTGGGCACTATTGG+AGG - chr8_4:25662463-25662482 Msa1320820:intron 45.0%
ACCTCCAATAGTGCCCAAAA+AGG + chr8_4:25662467-25662486 None:intergenic 45.0%
TGTCTTTCAGCCCTTGTGTA+TGG + chr8_4:25662492-25662511 None:intergenic 45.0%
GTCCACGAGTTATGGTTTAG+TGG + chr8_4:25662900-25662919 None:intergenic 45.0%
GGGACTATCGTGATATGGAT+TGG + chr8_4:25663234-25663253 None:intergenic 45.0%
ACGGAGGACCTCTAATAAAG+TGG - chr8_4:25663274-25663293 Msa1320820:intron 45.0%
!!! TCAGGTTGGGAGGTGAATTT+TGG - chr8_4:25663436-25663455 Msa1320820:intron 45.0%
! GTTGGGAGGTGAATTTTGGA+GGG - chr8_4:25663440-25663459 Msa1320820:intron 45.0%
!! GAGGTGAATTTTGGAGGGAA+GGG - chr8_4:25663445-25663464 Msa1320820:intron 45.0%
!! AGGTGAATTTTGGAGGGAAG+GGG - chr8_4:25663446-25663465 Msa1320820:intron 45.0%
! ATACACTAGTCTGCTTGGAG+GGG + chr8_4:25663728-25663747 None:intergenic 45.0%
! CATACACTAGTCTGCTTGGA+GGG + chr8_4:25663729-25663748 None:intergenic 45.0%
! ACATACACTAGTCTGCTTGG+AGG + chr8_4:25663730-25663749 None:intergenic 45.0%
GAGGCCATGCTACATACAAT+CGG - chr8_4:25663920-25663939 Msa1320820:intron 45.0%
CGAAAAGCAGCAAAAGAGCT+TGG - chr8_4:25663956-25663975 Msa1320820:intron 45.0%
AGCAGCAAAAGAGCTTGGAA+AGG - chr8_4:25663961-25663980 Msa1320820:intron 45.0%
GTTTATGAACGTCCCCTTCT+TGG - chr8_4:25663991-25664010 Msa1320820:intron 45.0%
!! TTTCCCAGAGTTGGTTTGGT+AGG - chr8_4:25664110-25664129 Msa1320820:intron 45.0%
GAACCTACCAAACCAACTCT+GGG + chr8_4:25664116-25664135 None:intergenic 45.0%
AGAACCTACCAAACCAACTC+TGG + chr8_4:25664117-25664136 None:intergenic 45.0%
AGAACGTCTTTGGACACACT+TGG + chr8_4:25664678-25664697 None:intergenic 45.0%
AAGTGTGTCCAAAGACGTTC+TGG - chr8_4:25664677-25664696 Msa1320820:intron 45.0%
!! GGCCAAAGCATTGAAACAGT+TGG - chr8_4:25664707-25664726 Msa1320820:intron 45.0%
GTGCATCCGTTTGTATCATG+TGG - chr8_4:25664780-25664799 Msa1320820:intron 45.0%
!! AGGGTGCTAAGGATGCTTTT+AGG - chr8_4:25664875-25664894 Msa1320820:intron 45.0%
!!! CCACCTGCTTGTCATTTTCT+CGG + chr8_4:25664918-25664937 None:intergenic 45.0%
ATCATGTTCTTGTGGCCTTC+TGG - chr8_4:25665000-25665019 Msa1320820:intron 45.0%
TTGGGCAGAGGATATGTAGA+TGG - chr8_4:25665253-25665272 Msa1320820:intron 45.0%
GCAGAGGATATGTAGATGGA+TGG - chr8_4:25665257-25665276 Msa1320820:five_prime_UTR 45.0%
GTAGATGGATGGACATTCTG+TGG - chr8_4:25665268-25665287 Msa1320820:five_prime_UTR 45.0%
TGGATGGACATTCTGTGGAT+TGG - chr8_4:25665273-25665292 Msa1320820:five_prime_UTR 45.0%
!!! TATTTGATATAAATTTTAAA+AGG - chr8_4:25658493-25658512 Msa1320820:CDS 5.0%
!!! TTTATTTTATTATGTTAATA+TGG - chr8_4:25660043-25660062 Msa1320820:intron 5.0%
CTGGGTTGCTTCGAAAATCC+TGG - chr8_4:25657222-25657241 Msa1320820:three_prime_UTR 50.0%
! TCTATACCAGCTGCTTGGTG+AGG - chr8_4:25658921-25658940 Msa1320820:intron 50.0%
! TCACTCCCTTTTACAGCAGG+TGG - chr8_4:25659495-25659514 Msa1320820:intron 50.0%
CATGCAAGAGGATATGGTGC+AGG - chr8_4:25659974-25659993 Msa1320820:intron 50.0%
! CACTCGTTGAGCTAGCTCTT+AGG + chr8_4:25660080-25660099 None:intergenic 50.0%
CTAAGAGCTAGCTCAACGAG+TGG - chr8_4:25660078-25660097 Msa1320820:intron 50.0%
TAGCTCAACGAGTGGGAATG+TGG - chr8_4:25660086-25660105 Msa1320820:intron 50.0%
AGCTCAACGAGTGGGAATGT+GGG - chr8_4:25660087-25660106 Msa1320820:intron 50.0%
GTCAGCACATGACTTGACTG+AGG - chr8_4:25660316-25660335 Msa1320820:intron 50.0%
CACATGACTTGACTGAGGGA+AGG - chr8_4:25660321-25660340 Msa1320820:intron 50.0%
!! TTCCCTGTACTTGGTTTGGG+TGG - chr8_4:25660390-25660409 Msa1320820:intron 50.0%
CAACCACCCAAACCAAGTAC+AGG + chr8_4:25660396-25660415 None:intergenic 50.0%
!! TTGGTTTGGGTGGTTGACTC+AGG - chr8_4:25660400-25660419 Msa1320820:intron 50.0%
GACTCAGGCTATGGTTTCCT+TGG - chr8_4:25660415-25660434 Msa1320820:intron 50.0%
GCTAAGATCGCGTGAAGAGT+AGG - chr8_4:25661115-25661134 Msa1320820:intron 50.0%
GGCTCACAAGAAGAGAAGAG+AGG - chr8_4:25661136-25661155 Msa1320820:intron 50.0%
GAGAAGAGAGGTGGAATTCC+AGG - chr8_4:25661148-25661167 Msa1320820:intron 50.0%
GCTATTTAGACCAAGGACGG+AGG - chr8_4:25661199-25661218 Msa1320820:intron 50.0%
ACTTCTCATTCCTCCGTCCT+TGG + chr8_4:25661212-25661231 None:intergenic 50.0%
AGGACGGAGGAATGAGAAGT+TGG - chr8_4:25661212-25661231 Msa1320820:intron 50.0%
!! GCCTTTGGAGAAGGCTGTTT+TGG - chr8_4:25661349-25661368 Msa1320820:intron 50.0%
AAGTCATCTGGTAGGGACTG+GGG + chr8_4:25661385-25661404 None:intergenic 50.0%
TTGCTGAATTAGCAGGCCCA+AGG - chr8_4:25661600-25661619 Msa1320820:intron 50.0%
TGCTGAATTAGCAGGCCCAA+GGG - chr8_4:25661601-25661620 Msa1320820:intron 50.0%
TAGCAGTAGGTGGGAGTTAG+AGG - chr8_4:25661679-25661698 Msa1320820:intron 50.0%
AGCAGTAGGTGGGAGTTAGA+GGG - chr8_4:25661680-25661699 Msa1320820:intron 50.0%
TGCATACGAACTTGAGGCTC+CGG + chr8_4:25662029-25662048 None:intergenic 50.0%
!! ACATTTAGGCTCAGGTTGGG+AGG - chr8_4:25663426-25663445 Msa1320820:intron 50.0%
! GGTTGGGAGGTGAATTTTGG+AGG - chr8_4:25663439-25663458 Msa1320820:intron 50.0%
!! GGAGGTGAATTTTGGAGGGA+AGG - chr8_4:25663444-25663463 Msa1320820:intron 50.0%
! TACACTAGTCTGCTTGGAGG+GGG + chr8_4:25663727-25663746 None:intergenic 50.0%
TCAAGGAGTGGAAAAGGACC+AGG + chr8_4:25663863-25663882 None:intergenic 50.0%
TCAGGAAGCTTACGGTGAAC+CGG - chr8_4:25664564-25664583 Msa1320820:intron 50.0%
CCAAAGACGTTCTGGTGTCT+CGG - chr8_4:25664685-25664704 Msa1320820:intron 50.0%
CAAAGACGTTCTGGTGTCTC+GGG - chr8_4:25664686-25664705 Msa1320820:intron 50.0%
ACGCCGAGAAAATGACAAGC+AGG - chr8_4:25664912-25664931 Msa1320820:intron 50.0%
CCGAGAAAATGACAAGCAGG+TGG - chr8_4:25664915-25664934 Msa1320820:intron 50.0%
AATGACAAGCAGGTGGAAGC+TGG - chr8_4:25664922-25664941 Msa1320820:intron 50.0%
! CGCATGTCTCGGGAAAGCAT+CGG + chr8_4:25657839-25657858 None:intergenic 55.0%
ACCTCCAGACAACGCCTAAC+TGG - chr8_4:25658000-25658019 Msa1320820:intron 55.0%
CTAACTGGCGACACAGTGCA+GGG - chr8_4:25658015-25658034 Msa1320820:intron 55.0%
! TGGGTGGTTGACTCAGGCTA+TGG - chr8_4:25660406-25660425 Msa1320820:intron 55.0%
CAAGAGGGAAGCAGAGTTGC+TGG - chr8_4:25661465-25661484 Msa1320820:intron 55.0%
GCAGTAGGTGGGAGTTAGAG+GGG - chr8_4:25661681-25661700 Msa1320820:intron 55.0%
AGGGTCCATCATGGCATCTC+TGG + chr8_4:25661904-25661923 None:intergenic 55.0%
! ACACTAGTCTGCTTGGAGGG+GGG + chr8_4:25663726-25663745 None:intergenic 55.0%
TCCTTTGTCTCGGACCCACT+CGG + chr8_4:25664017-25664036 None:intergenic 55.0%
TCACAAGTGACGGCAGCTTC+AGG - chr8_4:25664049-25664068 Msa1320820:intron 55.0%
CCGAGACACCAGAACGTCTT+TGG + chr8_4:25664688-25664707 None:intergenic 55.0%
! GCCAGTTAGGCGTTGTCTGG+AGG + chr8_4:25658004-25658023 None:intergenic 60.0%
! GTCGCCAGTTAGGCGTTGTC+TGG + chr8_4:25658007-25658026 None:intergenic 60.0%
CCTGCACTGTGTCGCCAGTT+AGG + chr8_4:25658017-25658036 None:intergenic 60.0%
CCTAACTGGCGACACAGTGC+AGG - chr8_4:25658014-25658033 Msa1320820:intron 60.0%
GCTTGGAGGGGGGATTTGGA+GGG + chr8_4:25663716-25663735 None:intergenic 60.0%
TGCTTGGAGGGGGGATTTGG+AGG + chr8_4:25663717-25663736 None:intergenic 60.0%
GTCTGCTTGGAGGGGGGATT+TGG + chr8_4:25663720-25663739 None:intergenic 60.0%
TCTGCAGCCTTGGGATCCCC+AGG + chr8_4:25658694-25658713 None:intergenic 65.0%
GGTAGGCCTCACCAAGCAGC+TGG + chr8_4:25658930-25658949 None:intergenic 65.0%
! GCTGCTTGGTGAGGCCTACC+AGG - chr8_4:25658930-25658949 Msa1320820:intron 65.0%
ACGTCCCCTTCTTGGCCGAG+TGG - chr8_4:25663999-25664018 Msa1320820:intron 65.0%
CGTCCCCTTCTTGGCCGAGT+GGG - chr8_4:25664000-25664019 Msa1320820:intron 65.0%
GGACCCACTCGGCCAAGAAG+GGG + chr8_4:25664006-25664025 None:intergenic 65.0%
CGGACCCACTCGGCCAAGAA+GGG + chr8_4:25664007-25664026 None:intergenic 65.0%
TCGGACCCACTCGGCCAAGA+AGG + chr8_4:25664008-25664027 None:intergenic 65.0%
GCCGAGTGGGTCCGAGACAA+AGG - chr8_4:25664013-25664032 Msa1320820:intron 65.0%
CTGGCGACACAGTGCAGGGC+TGG - chr8_4:25658019-25658038 Msa1320820:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 25657085 25665412 25657085 ID=Msa1320820;Name=Msa1320820
chr8_4 mRNA 25657085 25665412 25657085 ID=Msa1320820-mRNA-1;Parent=Msa1320820;Name=Msa1320820-mRNA-1;_AED=0.06;_eAED=0.06;_QI=190|0.88|0.9|1|0.88|0.9|10|455|335
chr8_4 exon 25657085 25657620 25657085 ID=Msa1320820-mRNA-1:exon:8832;Parent=Msa1320820-mRNA-1
chr8_4 exon 25657754 25657834 25657754 ID=Msa1320820-mRNA-1:exon:8831;Parent=Msa1320820-mRNA-1
chr8_4 exon 25658176 25658336 25658176 ID=Msa1320820-mRNA-1:exon:8830;Parent=Msa1320820-mRNA-1
chr8_4 exon 25658427 25658585 25658427 ID=Msa1320820-mRNA-1:exon:8829;Parent=Msa1320820-mRNA-1
chr8_4 exon 25660196 25660325 25660196 ID=Msa1320820-mRNA-1:exon:8828;Parent=Msa1320820-mRNA-1
chr8_4 exon 25660427 25660592 25660427 ID=Msa1320820-mRNA-1:exon:8827;Parent=Msa1320820-mRNA-1
chr8_4 exon 25663484 25663566 25663484 ID=Msa1320820-mRNA-1:exon:8826;Parent=Msa1320820-mRNA-1
chr8_4 exon 25663774 25663833 25663774 ID=Msa1320820-mRNA-1:exon:8825;Parent=Msa1320820-mRNA-1
chr8_4 exon 25665043 25665160 25665043 ID=Msa1320820-mRNA-1:exon:8824;Parent=Msa1320820-mRNA-1
chr8_4 exon 25665254 25665412 25665254 ID=Msa1320820-mRNA-1:exon:8823;Parent=Msa1320820-mRNA-1
chr8_4 five_prime_UTR 25665254 25665412 25665254 ID=Msa1320820-mRNA-1:five_prime_utr;Parent=Msa1320820-mRNA-1
chr8_4 five_prime_UTR 25665130 25665160 25665130 ID=Msa1320820-mRNA-1:five_prime_utr;Parent=Msa1320820-mRNA-1
chr8_4 CDS 25665043 25665129 25665043 ID=Msa1320820-mRNA-1:cds;Parent=Msa1320820-mRNA-1
chr8_4 CDS 25663774 25663833 25663774 ID=Msa1320820-mRNA-1:cds;Parent=Msa1320820-mRNA-1
chr8_4 CDS 25663484 25663566 25663484 ID=Msa1320820-mRNA-1:cds;Parent=Msa1320820-mRNA-1
chr8_4 CDS 25660427 25660592 25660427 ID=Msa1320820-mRNA-1:cds;Parent=Msa1320820-mRNA-1
chr8_4 CDS 25660196 25660325 25660196 ID=Msa1320820-mRNA-1:cds;Parent=Msa1320820-mRNA-1
chr8_4 CDS 25658427 25658585 25658427 ID=Msa1320820-mRNA-1:cds;Parent=Msa1320820-mRNA-1
chr8_4 CDS 25658176 25658336 25658176 ID=Msa1320820-mRNA-1:cds;Parent=Msa1320820-mRNA-1
chr8_4 CDS 25657754 25657834 25657754 ID=Msa1320820-mRNA-1:cds;Parent=Msa1320820-mRNA-1
chr8_4 CDS 25657540 25657620 25657540 ID=Msa1320820-mRNA-1:cds;Parent=Msa1320820-mRNA-1
chr8_4 three_prime_UTR 25657085 25657539 25657085 ID=Msa1320820-mRNA-1:three_prime_utr;Parent=Msa1320820-mRNA-1
Gene Sequence

>Msa1320820

ATGGTGAAGGAAACTGCTTACTATGATACATTAGGTGTTAGTGTTGATGCATCTGCTGCAGATATCAAAAAGGCTTATTATGTTAAGGCAAGAATTGTTCACCCTGATAAAAATCCTGGGGATCCCAAGGCTGCAGAAAATTTTCAGCTGCTTGGTGAGGCCTACCAGGTTTTAAGCGATCCTGAGAAGCGTGAAGCATATGACAAAAATGGAAAGGCAGCGGTGTCACAAGATGCCATGATGGACCCTACAACTGTATTTGGAATGCTTTTTGGAAGTGAATTTTTCGAAGAGTATATTGGAATACTTGCACTTGCTTCTTTAGCATCTATAGAAGTTGAGGAAGATTCACCGGAGCCTCAAGTTCGTATGCAGAAAATTCAAGAAAAGATGAAAGTATGGCAGAAAGAAAGAGAACAGAAGCTGATATCGGTTTTGAAAGACCGTTTGCAACCATTTGTTGATGGCCGAGAAGAAGAATTTACAAAATGGGCAAATTCTGAAGCTCGTAATCTTTCAAAAGCTGCTTTTGGAGAGGCCATGCTACATACAATCGGTTATATCTACACACGAAAAGCAGCAAAAGAGCTTGGAAAGGATATTCGGTTTATGAACGTCCCCTTCTTGGCCGAGTGGGTCCGAGACAAAGGACACCGTATAAAGTCACAAGTGACGGCAGCTTCAGGAGCTGTGTCTCTAATTCAAATACAAGAAGAGCTCAAGAAGCTAAATCAAGGAGAAAATAAAGAAGAAAACATAATGAAAGCTCTTGAAGATAAGAAGGATGCCATGATTAATTCCTTATGGAAGATTAATGTCATTGATATTGAATCAACTTTGTCACATGTTCTTAAAGATCCAAGTGTGTCCAAAGACGTTCTGGTGTCTCGGGCCAAAGCATTGAAACAGTTGGGAACGATCTTTCAAGGTGCTAAGGATGCTTTTAGGAGAGAAAACAGTCTACGCCGAGAAAATGACAAGCAGGTGGAAGCTGGTTCCTCATCATAA

Protein sequence

>Msa1320820

MVKETAYYDTLGVSVDASAADIKKAYYVKARIVHPDKNPGDPKAAENFQLLGEAYQVLSDPEKREAYDKNGKAAVSQDAMMDPTTVFGMLFGSEFFEEYIGILALASLASIEVEEDSPEPQVRMQKIQEKMKVWQKEREQKLISVLKDRLQPFVDGREEEFTKWANSEARNLSKAAFGEAMLHTIGYIYTRKAAKELGKDIRFMNVPFLAEWVRDKGHRIKSQVTAASGAVSLIQIQEELKKLNQGENKEENIMKALEDKKDAMINSLWKINVIDIESTLSHVLKDPSVSKDVLVSRAKALKQLGTIFQGAKDAFRRENSLRRENDKQVEAGSSS*