AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0187030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0187030 MtrunA17_Chr5g0394641 95.668 1662 69 1 1 1659 1 1662 0.0 3117
Msa0187030 MtrunA17_Chr1g0204981 57.278 1793 618 18 1 1659 1 1779 0.0 1814
Msa0187030 MtrunA17_Chr1g0185241 36.079 1821 973 22 2 1659 4 1796 0.0 940
Msa0187030 MtrunA17_Chr7g0260161 33.333 1830 975 37 1 1659 1 1756 0.0 738
Msa0187030 MtrunA17_Chr5g0432781 75.862 87 21 0 8 94 16 102 5.21e-39 155
Msa0187030 MtrunA17_Chr5g0412211 56.757 111 48 0 13 123 10 120 3.32e-35 147
Msa0187030 MtrunA17_Chr8g0367521 30.921 304 165 5 13 279 10 305 4.88e-33 139
Msa0187030 MtrunA17_Chr5g0427501 29.818 275 148 6 13 251 10 275 2.42e-29 127
Msa0187030 MtrunA17_Chr7g0268631 41.279 172 77 5 14 161 53 224 1.78e-26 112
Msa0187030 MtrunA17_Chr3g0132861 33.333 273 121 10 21 244 13 273 1.77e-24 112
Msa0187030 MtrunA17_Chr1g0196081 55.696 79 34 1 15 92 17 95 8.36e-23 104
Msa0187030 MtrunA17_Chr3g0107891 51.807 83 37 1 34 116 13 92 4.88e-19 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0187030 AT3G22790.1 41.313 1767 890 26 1 1659 1 1728 0.0 1065
Msa0187030 AT3G22790.3 41.313 1767 890 26 1 1659 1 1728 0.0 1065
Msa0187030 AT3G22790.2 41.313 1767 890 26 1 1659 1 1728 0.0 1065
Msa0187030 AT4G14760.4 39.061 1746 941 23 1 1659 1 1710 0.0 996
Msa0187030 AT4G14760.2 39.061 1746 941 23 1 1659 1 1710 0.0 996
Msa0187030 AT4G14760.3 39.061 1746 941 23 1 1659 1 1710 0.0 996
Msa0187030 AT4G14760.1 39.061 1746 941 23 1 1659 1 1710 0.0 996
Msa0187030 AT1G03080.3 33.978 1810 964 27 1 1657 1 1732 0.0 811
Msa0187030 AT1G03080.1 33.978 1810 964 27 1 1657 1 1732 0.0 811
Msa0187030 AT1G03080.2 33.978 1810 964 27 1 1657 1 1732 0.0 811
Msa0187030 AT4G02710.1 37.986 566 278 4 1 493 1 566 4.68e-114 390
Msa0187030 AT4G02710.1 27.802 464 225 19 1203 1643 703 1079 1.48e-24 112
Msa0187030 AT2G30500.2 65.591 93 32 0 7 99 15 107 2.38e-36 146
Msa0187030 AT2G30500.1 65.591 93 32 0 7 99 15 107 2.38e-36 146
Msa0187030 AT2G30500.3 65.591 93 32 0 7 99 14 106 2.64e-36 146
Msa0187030 AT2G22560.1 37.168 226 107 4 13 203 10 235 1.65e-33 141
Msa0187030 AT1G58215.1 28.298 523 265 14 13 484 10 473 4.95e-33 140
Msa0187030 AT5G10500.1 55.856 111 44 2 13 118 10 120 5.97e-33 139
Msa0187030 AT5G58320.1 62.921 89 33 0 8 96 16 104 1.18e-29 126
Msa0187030 AT5G58320.4 62.921 89 33 0 8 96 16 104 1.18e-29 126
Msa0187030 AT5G58320.5 62.921 89 33 0 8 96 16 104 1.38e-29 126
Msa0187030 AT5G58320.2 62.921 89 33 0 8 96 16 104 1.38e-29 126
Msa0187030 AT1G09720.1 55.000 100 45 0 13 112 10 109 1.87e-29 128
Msa0187030 AT2G47920.2 60.000 75 29 1 15 88 10 84 1.16e-24 104
Msa0187030 AT2G47920.1 60.000 75 29 1 15 88 10 84 1.16e-24 104
Msa0187030 AT1G03470.2 51.579 95 45 1 15 108 8 102 1.50e-24 105
Msa0187030 AT1G03470.3 51.579 95 45 1 15 108 8 102 1.50e-24 105
Msa0187030 AT1G03470.1 51.579 95 45 1 15 108 8 102 1.50e-24 105
Msa0187030 AT1G03470.4 51.579 95 45 1 15 108 8 102 1.50e-24 105
Msa0187030 AT5G58320.3 65.574 61 21 0 36 96 1 61 1.11e-18 91.7
Msa0187030 AT4G03153.1 41.026 78 41 2 15 87 7 84 1.39e-13 72.4

Find 272 sgRNAs with CRISPR-Local

Find 439 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAACACCACACACTTTA+TGG 0.118574 2_1:+1763208 None:intergenic
GTTAAGATCTGTTTCCATTT+TGG 0.146184 2_1:+1765258 None:intergenic
CTTGCTTTGGAGCTTAAATA+TGG 0.167455 2_1:-1764473 Msa0187030:CDS
TGTCTTGTTGATTGAGAAAA+TGG 0.174062 2_1:-1768134 Msa0187030:five_prime_UTR
CCTAATTTAGCTAGTAAAAT+TGG 0.194518 2_1:-1760617 Msa0187030:three_prime_UTR
ATGTTTCATTTGCTTCATTA+AGG 0.229175 2_1:+1762284 None:intergenic
ATCCTTATCAGACTGGATTT+TGG 0.232815 2_1:+1765321 None:intergenic
GCAATTTCCAAACTTGAATA+TGG 0.233837 2_1:+1761524 None:intergenic
CCAATACATATTGCTGAAAT+TGG 0.237091 2_1:-1760823 Msa0187030:CDS
TGAAGCGCGACTGGCAAATT+TGG 0.240493 2_1:-1763514 Msa0187030:CDS
TGGCTTCTGGAAAATCTTAC+AGG 0.247941 2_1:-1767040 Msa0187030:intron
TCCTGAACACTCCAAGTTCT+TGG 0.249018 2_1:+1762551 None:intergenic
CATATCTATTACAAGTTTGT+AGG 0.252151 2_1:-1767889 Msa0187030:intron
ATTTGTTCAGAACCTCTTCT+TGG 0.257824 2_1:+1760876 None:intergenic
CCTGGAGAAAATATCTAAAA+TGG 0.258324 2_1:-1764807 Msa0187030:CDS
TTTGGAGAAGTTATCCAAAA+TGG 0.271104 2_1:-1765272 Msa0187030:CDS
GAAGTTAGCTATTCTTAAAA+TGG 0.276694 2_1:-1761084 Msa0187030:CDS
CTCTGGTAAGTTCTTGCTTT+AGG 0.278270 2_1:+1765041 None:intergenic
AGTTTACTGGAAAGTGAAAT+TGG 0.278527 2_1:-1761995 Msa0187030:CDS
TTAAGTGCATTGTTTCATTT+TGG 0.281956 2_1:-1760669 Msa0187030:three_prime_UTR
GAGAATTAAATCAGGTGATT+TGG 0.295548 2_1:-1763778 Msa0187030:CDS
AGCTCTAAGCAACCTCAATT+TGG 0.303357 2_1:-1762665 Msa0187030:CDS
TACAGATGCCGCAAAAGAAT+TGG 0.304958 2_1:+1764145 None:intergenic
TTGCGTGTTTGTGGATGTTC+GGG 0.306727 2_1:-1760732 Msa0187030:CDS
CTCTTCCTTAAAATCTTGTT+TGG 0.307809 2_1:+1764421 None:intergenic
AATTCCAATATCGCGTATAT+TGG 0.307942 2_1:-1763139 Msa0187030:CDS
TGCATTATTACCTTTCAAAT+TGG 0.309028 2_1:+1767358 None:intergenic
GTTCTGATTTGAAACTCTTC+AGG 0.310524 2_1:+1767209 None:intergenic
TAGAATCAGAAAGTTTAAAA+TGG 0.314422 2_1:-1763235 Msa0187030:CDS
CTGAGGATTGAAGTAGTAAA+TGG 0.318161 2_1:-1762892 Msa0187030:CDS
ACGAAGCTTCGCCTTTAGAT+AGG 0.321073 2_1:-1760905 Msa0187030:CDS
AGTCCAGACGCTTATATTCT+TGG 0.322787 2_1:-1767099 Msa0187030:CDS
TAGAGCACATTTCCCGCCTT+TGG 0.324061 2_1:-1761904 Msa0187030:CDS
ACCAAGAACTTGGAGTGTTC+AGG 0.325193 2_1:-1762552 Msa0187030:CDS
CAGCATCTGGTAGAGTTATA+TGG 0.327070 2_1:+1760487 None:intergenic
GAGAGAAATAATCAGTTTAC+TGG 0.327774 2_1:-1762008 Msa0187030:CDS
ATCATTGTTTAGGAATGTTT+CGG 0.333177 2_1:-1762749 Msa0187030:CDS
TTGTTGAATCATCTGGTTCT+TGG 0.335813 2_1:-1768086 Msa0187030:five_prime_UTR
TTTGGCCAGGGCTTCCCTTA+AGG 0.336813 2_1:+1765339 None:intergenic
AAACCGAAATCTTCAGTTAG+AGG 0.343043 2_1:-1764672 Msa0187030:CDS
TTGTCCAATATACGCGATAT+TGG 0.344897 2_1:+1763135 None:intergenic
AAGTTGAACAACACAGGGTT+AGG 0.344929 2_1:-1762231 Msa0187030:CDS
ATCGACTCCATATTCAAGTT+TGG 0.345717 2_1:-1761531 Msa0187030:CDS
CTTGAACAACTACAGAGTTT+AGG 0.349038 2_1:-1764176 Msa0187030:CDS
TCCACTGTTGGCGCAGATAA+TGG 0.352338 2_1:+1761281 None:intergenic
AGAAAATGAGTTCAAACTTT+GGG 0.353372 2_1:-1762176 Msa0187030:CDS
TGAAAGTATGCAGAAGATAT+TGG 0.353641 2_1:-1763859 Msa0187030:CDS
TCTTCAGTACCAGGAGAGTT+TGG 0.354498 2_1:-1765290 Msa0187030:CDS
GGACAAAGAGCTGCTGGAAA+TGG 0.358674 2_1:-1762470 Msa0187030:CDS
ATGCTCTCGCTTCAAATACT+TGG 0.370779 2_1:+1761355 None:intergenic
GATGCTAAAATTGAGTTTGA+AGG 0.371878 2_1:-1763804 Msa0187030:CDS
AAGCATTCTAATATCTCAAT+TGG 0.373775 2_1:-1763703 Msa0187030:CDS
ATGTATTTGACCGCAATTCA+TGG 0.376359 2_1:-1761448 Msa0187030:CDS
GATGAGAGTGATTCAGCATC+AGG 0.377145 2_1:+1765430 None:intergenic
TCCACTAACTTCATGAGTTC+CGG 0.377336 2_1:+1765601 None:intergenic
GATTCACCATGCGGTTCTTT+AGG 0.377743 2_1:-1765454 Msa0187030:CDS
CCAATTTCAGCAATATGTAT+TGG 0.380000 2_1:+1760823 None:intergenic
AAAGAATTCAAAATGGCTTC+TGG 0.380490 2_1:-1767053 Msa0187030:CDS
CAGTTGACATTGCATCTTTG+AGG 0.381285 2_1:+1762725 None:intergenic
AGAAGAGGTTCTGAACAAAT+AGG 0.382023 2_1:-1760873 Msa0187030:CDS
TGCCATCGTTCAGATGATTC+TGG 0.382173 2_1:-1761245 Msa0187030:CDS
GCTAAAAGAAGACTGCAAAA+AGG 0.383534 2_1:-1764096 Msa0187030:CDS
TCTAAATTACTCCTCAGAAT+TGG 0.384969 2_1:-1761216 Msa0187030:CDS
GTCTACTTTGGCAGCTCTGC+AGG 0.385523 2_1:-1762845 Msa0187030:CDS
GACGCTTATATTCTTGGTGG+TGG 0.386296 2_1:-1767093 Msa0187030:CDS
CAGCCTCTAACTGAAGATTT+CGG 0.390968 2_1:+1764669 None:intergenic
GCAAAATTGTATTGAAGAGT+TGG 0.392630 2_1:-1763388 Msa0187030:CDS
TATCACCAAAATTAAGCAAA+AGG 0.396423 2_1:+1767967 None:intergenic
TGATTTCTCATCAGCAAGAA+TGG 0.397258 2_1:+1763911 None:intergenic
ACCTTGCTGAGGAGAATTCC+AGG 0.397551 2_1:-1764940 Msa0187030:CDS
GGTTAAGGTCATTGTTCAAA+TGG 0.398571 2_1:+1762572 None:intergenic
CATCGTTTCTTCTTTAAAAG+AGG 0.398683 2_1:-1761939 Msa0187030:CDS
GCTGAGTTGGGAAATGCTTC+TGG 0.399256 2_1:+1765496 None:intergenic
ATTGCGTGTTTGTGGATGTT+CGG 0.400094 2_1:-1760733 Msa0187030:CDS
GGAAGAGATGCAAGAGATTG+TGG 0.402505 2_1:-1764405 Msa0187030:CDS
AGTTAATCCTCATTAGTTGA+TGG 0.404823 2_1:+1760708 None:intergenic
ATCAGAACAATACTAATATC+AGG 0.406894 2_1:-1767194 Msa0187030:five_prime_UTR
GTTGCATTCTGCTAGAGTTA+TGG 0.411331 2_1:-1767140 Msa0187030:exon
GCATGAAACTCATCAAATAA+AGG 0.413368 2_1:-1764237 Msa0187030:CDS
ATTTGAAGCGAGAGCATAGA+AGG 0.414336 2_1:-1761349 Msa0187030:CDS
TATGAAACTTTGAATGAGTC+TGG 0.416746 2_1:+1768012 None:intergenic
ATGGTGAAGTTCAAACCTTA+AGG 0.418626 2_1:-1765354 Msa0187030:CDS
CAAGTGTTTCAAGAAGAAAA+TGG 0.420204 2_1:-1762793 Msa0187030:CDS
AGCTCAAGATTATGAAAGTT+AGG 0.423289 2_1:+1767385 None:intergenic
ATTGGACAAAATTGAGAGCT+TGG 0.424439 2_1:-1763121 Msa0187030:CDS
ACACTCCAAGTTCTTGGTTA+AGG 0.427564 2_1:+1762557 None:intergenic
ACAGATGCCGCAAAAGAATT+GGG 0.427925 2_1:+1764146 None:intergenic
GCTTCGTCTGTTGAAGGACT+TGG 0.429617 2_1:-1764450 Msa0187030:CDS
TCAAATTGAATCAGCTCTAC+AGG 0.429684 2_1:-1764540 Msa0187030:CDS
AGATGACAAGAGGAGGATCT+TGG 0.431001 2_1:-1761129 Msa0187030:CDS
AAGAAAATGAGTTCAAACTT+TGG 0.431099 2_1:-1762177 Msa0187030:CDS
GAAGGTTTGAGAATTAAATC+AGG 0.432749 2_1:-1763786 Msa0187030:CDS
TTGAACTTCTAGAGGAGAAC+AGG 0.433283 2_1:-1762918 Msa0187030:CDS
CTTCAGCTCCTCAATATGTC+TGG 0.433503 2_1:+1762405 None:intergenic
ATTGGACATAGAGAAGGAAT+TGG 0.436742 2_1:-1761198 Msa0187030:CDS
TAGAATGTAATATGCTGAGT+TGG 0.437923 2_1:+1765483 None:intergenic
ATTGGAGAATAATACCTTGC+TGG 0.438016 2_1:-1763841 Msa0187030:CDS
GACTGCAAACTCTGATGCAT+GGG 0.439795 2_1:-1764580 Msa0187030:CDS
AGAATGTAATATGCTGAGTT+GGG 0.440026 2_1:+1765484 None:intergenic
TGATAAAGTAATTTCGGAGC+TGG 0.440893 2_1:-1763304 Msa0187030:CDS
GTCTTGTTGATTGAGAAAAT+GGG 0.444118 2_1:-1768133 Msa0187030:five_prime_UTR
ATATGGGCTTCGTCTGTTGA+AGG 0.446717 2_1:-1764456 Msa0187030:CDS
TGAAAAGAAGGTTACAAAGT+TGG 0.446886 2_1:-1763652 Msa0187030:CDS
TTGCTTTGGAGCTTAAATAT+GGG 0.447982 2_1:-1764472 Msa0187030:CDS
TGGTGAAGTTCAAACCTTAA+GGG 0.449648 2_1:-1765353 Msa0187030:CDS
AACTTCAAGTTCATTCACTT+TGG 0.450157 2_1:-1767926 Msa0187030:five_prime_UTR
AGAAGGAAATTGCGTGTTTG+TGG 0.450411 2_1:-1760741 Msa0187030:CDS
AATTTGATCATTAAGCATCC+TGG 0.454222 2_1:+1764922 None:intergenic
GAGAGATACGATCATGCAAT+GGG 0.454331 2_1:-1765547 Msa0187030:CDS
AGTAAGTATAAATGATCAAA+TGG 0.457953 2_1:-1760943 Msa0187030:CDS
AGCAAGGTTACTGAGCTTAC+TGG 0.458049 2_1:-1762088 Msa0187030:CDS
GGACTGAATGATGAGTTAGA+TGG 0.458324 2_1:-1763993 Msa0187030:CDS
GGAGCAAAGAAATCTTGCTT+TGG 0.462130 2_1:-1764486 Msa0187030:CDS
ATAGTCCAAAGAATTCAAAA+TGG 0.462610 2_1:-1767060 Msa0187030:CDS
ACACTCAAGTGAAGCGCGAC+TGG 0.463044 2_1:-1763523 Msa0187030:CDS
AATAGGAAAGTTGCAGTTTG+AGG 0.464053 2_1:-1760856 Msa0187030:CDS
TCTTGAAAAGATTCCAATGT+TGG 0.464403 2_1:-1764975 Msa0187030:CDS
ATGGCTATGTTTCCGAAGAC+AGG 0.465754 2_1:+1761697 None:intergenic
TTTGATGGAAAATGCCTGTA+TGG 0.469152 2_1:-1764030 Msa0187030:CDS
CTACAGGAAGAACAGCGGTT+GGG 0.470417 2_1:-1763474 Msa0187030:CDS
TCTAGAAACTATAGCTAGAC+TGG 0.470639 2_1:-1765104 Msa0187030:CDS
AGCAGATTCATTTGCAAGGA+GGG 0.470880 2_1:-1765647 Msa0187030:CDS
ATCACCAAAATTAAGCAAAA+GGG 0.473862 2_1:+1767968 None:intergenic
GTAGAGAACTCTGTCCTCAT+AGG 0.474140 2_1:-1763054 Msa0187030:CDS
ATAAGGATGCCGGTGAAGTT+CGG 0.474892 2_1:-1765138 Msa0187030:CDS
TGTCCTTTACCATCACTGCC+TGG 0.476564 2_1:-1764825 Msa0187030:CDS
ACTAAGTAACCTTGAAAAGA+AGG 0.478266 2_1:-1763664 Msa0187030:CDS
GAGACTCGATGATGAAAGTT+CGG 0.479116 2_1:-1762056 Msa0187030:CDS
AATGGAAATCTCTAAGTTGA+AGG 0.480099 2_1:-1764321 Msa0187030:CDS
CAGACAGATTCTTGAACAAT+CGG 0.480977 2_1:-1762341 Msa0187030:CDS
TTGAATTCTTTGGACTATTG+TGG 0.481281 2_1:+1767065 None:intergenic
AATTCAAGTCGTAATATTGA+AGG 0.485384 2_1:-1765185 Msa0187030:CDS
GTACACTACAAACCAGCATC+TGG 0.485935 2_1:+1760474 None:intergenic
TTTAGCACTGTTAGAAAGCA+AGG 0.486773 2_1:-1762104 Msa0187030:CDS
TGCTCTCTTTCTTCAGTACC+AGG 0.487980 2_1:-1765299 Msa0187030:CDS
AAATAGATCAAAGTCTACTT+TGG 0.489817 2_1:-1762857 Msa0187030:CDS
TTGGAGAGGCTTTCCTCGGA+TGG 0.491217 2_1:-1761110 Msa0187030:CDS
AGCTGCTGGAAATGGAGAAA+AGG 0.491750 2_1:-1762462 Msa0187030:CDS
AGAGCACTTTGTGAACATCT+TGG 0.491901 2_1:-1762604 Msa0187030:CDS
GAGGATGGACAAAGAGCTGC+TGG 0.492868 2_1:-1762476 Msa0187030:CDS
TTCTTTATGGAACATATACT+AGG 0.495551 2_1:-1760438 Msa0187030:three_prime_UTR
TGTATCATTGTCTTTGAAGT+GGG 0.497465 2_1:+1768175 None:intergenic
CAGGGTTAGGGAAGAAGCAC+TGG 0.498072 2_1:-1762218 Msa0187030:CDS
CTGCTAACGCACGGTATGCT+CGG 0.498305 2_1:+1765569 None:intergenic
TTTGATGAGTTTCATGCTTG+AGG 0.499392 2_1:+1764243 None:intergenic
GTTGTACTCTCAATCACAAA+AGG 0.500411 2_1:-1764507 Msa0187030:CDS
GATCTTGGAGAGGCTTTCCT+CGG 0.500969 2_1:-1761114 Msa0187030:CDS
GGTAGGCAATGGAGCGCAAA+AGG 0.501322 2_1:-1761864 Msa0187030:intron
GGCCAAAATCCAGTCTGATA+AGG 0.502051 2_1:-1765323 Msa0187030:CDS
AAGACATATAGAAGAAGTTG+AGG 0.504227 2_1:-1760982 Msa0187030:CDS
TTGGACATAGAGAAGGAATT+GGG 0.505480 2_1:-1761197 Msa0187030:CDS
CGAAGCTTCGCCTTTAGATA+GGG 0.506565 2_1:-1760904 Msa0187030:CDS
TACAGGAAGAACAGCGGTTG+GGG 0.507538 2_1:-1763473 Msa0187030:CDS
TAGTATATGTTCCATAAAGA+AGG 0.507556 2_1:+1760440 None:intergenic
AATGACCTTAACCAAGAACT+TGG 0.508324 2_1:-1762562 Msa0187030:CDS
CCAGACGCTTATATTCTTGG+TGG 0.508563 2_1:-1767096 Msa0187030:CDS
TAACAGAGAAAATTCCATAC+AGG 0.513474 2_1:+1764016 None:intergenic
CTGAGGAAAACAACAACAAA+GGG 0.513621 2_1:-1760800 Msa0187030:CDS
TTGAATCATCTGGTTCTTGG+TGG 0.514519 2_1:-1768083 Msa0187030:five_prime_UTR
AGCAAATCTGAAACTCCATC+TGG 0.515437 2_1:+1761641 None:intergenic
CTTGGAATCTCCCTATCTAA+AGG 0.516431 2_1:+1760894 None:intergenic
TTGTATCATTGTCTTTGAAG+TGG 0.519878 2_1:+1768174 None:intergenic
CCACCAAGAATATAAGCGTC+TGG 0.522303 2_1:+1767096 None:intergenic
GCCGGAACTCATGAAGTTAG+TGG 0.523321 2_1:-1765602 Msa0187030:CDS
AGAAATTCTGTGGTAGGCAA+TGG 0.523726 2_1:-1761875 Msa0187030:CDS
TCAAATTGAAAGAACAGAGC+TGG 0.523888 2_1:-1764906 Msa0187030:CDS
GATGCAGCTAAAAGCAGATA+AGG 0.526767 2_1:-1765155 Msa0187030:CDS
GAATTTCAGCTTCACTTGCT+CGG 0.526802 2_1:+1765203 None:intergenic
GGAAGAACAGCGGTTGGGGA+AGG 0.528099 2_1:-1763469 Msa0187030:CDS
ATTTGCTGACATTGCAGACA+AGG 0.530180 2_1:-1761625 Msa0187030:CDS
GCTGGAAATGGAGAAAAGGC+TGG 0.530415 2_1:-1762458 Msa0187030:CDS
AGACTGCAAACTCTGATGCA+TGG 0.530484 2_1:-1764581 Msa0187030:CDS
ACATATTGAGGAGCTGAAGA+TGG 0.533144 2_1:-1762401 Msa0187030:CDS
TCAAACCTTAAGGGAAGCCC+TGG 0.533697 2_1:-1765344 Msa0187030:CDS
TAGTGATTGAGACCTGTCTT+CGG 0.534595 2_1:-1761709 Msa0187030:CDS
GTTCAAACTTTGGGAGAATG+AGG 0.536840 2_1:-1762167 Msa0187030:CDS
AAACAGGTATATTGTTGAGA+AGG 0.538708 2_1:-1760758 Msa0187030:CDS
ATCATAGCATGGTCCACTGT+TGG 0.538724 2_1:+1761269 None:intergenic
AGAGAGCATCCTTATCAGAC+TGG 0.539401 2_1:+1765314 None:intergenic
GAATGAGTCAACTGAGAGGA+TGG 0.539681 2_1:-1762491 Msa0187030:CDS
CATATAACTCTACCAGATGC+TGG 0.540003 2_1:-1760486 Msa0187030:three_prime_UTR
ACAAAGAAGAAAAGCAAGCA+AGG 0.540703 2_1:-1761032 Msa0187030:CDS
CTGATTGTACCGAACTTCAC+CGG 0.542922 2_1:+1765129 None:intergenic
AGCAGTTGAAAAGATTATGA+TGG 0.543384 2_1:-1761597 Msa0187030:CDS
GAAAGTGTGTTAATACCAGA+TGG 0.545253 2_1:-1761656 Msa0187030:CDS
GAATCTAGTCCACGTACTAC+AGG 0.548695 2_1:-1763490 Msa0187030:CDS
GATTGAAGTAGTAAATGGAC+TGG 0.549223 2_1:-1762887 Msa0187030:CDS
TGCTTAGAGCTAGTACCTCA+TGG 0.550458 2_1:+1762677 None:intergenic
GGAGTCAATGTTATCTCAGA+AGG 0.551468 2_1:-1765083 Msa0187030:CDS
TTCAGAAAATTCTATATCGA+AGG 0.552886 2_1:+1767433 None:intergenic
ATAACTTCTCCAAACTCTCC+TGG 0.555879 2_1:+1765281 None:intergenic
CTTCTCTATGTCCAATTCTG+AGG 0.557116 2_1:+1761205 None:intergenic
CATATTGCTGAAATTGGCTG+AGG 0.557283 2_1:-1760817 Msa0187030:CDS
AAGTGAAATTGGAGAACTGA+AGG 0.558589 2_1:-1761984 Msa0187030:CDS
ACTAAAAGAAATTCTGTGGT+AGG 0.558630 2_1:-1761881 Msa0187030:CDS
CTTCACTTGCTCGGTCATCA+AGG 0.559018 2_1:+1765212 None:intergenic
TGGATTGAGAGGAACAGTGA+AGG 0.560139 2_1:-1763973 Msa0187030:CDS
AATGATCAAGCTCATTGAAG+AGG 0.561562 2_1:-1765671 Msa0187030:CDS
CTTCAGATTGATTCAGACGG+AGG 0.562174 2_1:-1763189 Msa0187030:CDS
GTTGATTGAGAAAATGGGGT+AGG 0.565584 2_1:-1768128 Msa0187030:five_prime_UTR
GATAGGGAGATTCCAAGAAG+AGG 0.569385 2_1:-1760888 Msa0187030:CDS
TCATCCACATTGCGATCAAG+TGG 0.569692 2_1:+1761386 None:intergenic
TTCTCTAGTGAAAAGTCAAG+AGG 0.570064 2_1:-1763094 Msa0187030:CDS
ACTACAGGAAGAACAGCGGT+TGG 0.571147 2_1:-1763475 Msa0187030:CDS
TCTCCAGGCAGTGATGGTAA+AGG 0.571181 2_1:+1764822 None:intergenic
AGCTCTCATAAACCAAATTG+AGG 0.574202 2_1:+1762653 None:intergenic
GATGAGTTAGATGGATTGAG+AGG 0.575363 2_1:-1763984 Msa0187030:CDS
ACCATTATCTGCGCCAACAG+TGG 0.576959 2_1:-1761282 Msa0187030:CDS
AGTTGAACAACACAGGGTTA+GGG 0.579217 2_1:-1762230 Msa0187030:CDS
TTCATGAAGTTGAACAACAC+AGG 0.579740 2_1:-1762237 Msa0187030:CDS
AGCTAACTTCTGACCATCCG+AGG 0.580497 2_1:+1761097 None:intergenic
TACCAGAGTGGTAGTTCAGA+AGG 0.583243 2_1:-1765026 Msa0187030:CDS
TTGGACTAAAAGAAATTCTG+TGG 0.583886 2_1:-1761885 Msa0187030:CDS
CTAAAAGCAGATAAGGATGC+CGG 0.584614 2_1:-1765148 Msa0187030:CDS
TCCTGGAATTCTCCTCAGCA+AGG 0.585346 2_1:+1764939 None:intergenic
AGAGAGATACGATCATGCAA+TGG 0.585492 2_1:-1765548 Msa0187030:CDS
ACGCTTATATTCTTGGTGGT+GGG 0.586298 2_1:-1767092 Msa0187030:CDS
CTCAGAATTGGACATAGAGA+AGG 0.586349 2_1:-1761204 Msa0187030:CDS
AGCTGGAAGTTGAAACATTG+AGG 0.587073 2_1:-1764889 Msa0187030:CDS
GCTGCTGAAGTGAACCTATG+AGG 0.587509 2_1:+1763040 None:intergenic
TTCAGATTGATTCAGACGGA+GGG 0.591610 2_1:-1763188 Msa0187030:CDS
TGAGCTGTGACCAATTTGAA+AGG 0.596365 2_1:-1767368 Msa0187030:intron
TTCGGGGCCATCAACTAATG+AGG 0.597090 2_1:-1760715 Msa0187030:CDS
AGGAAGCAGATTCATTTGCA+AGG 0.599111 2_1:-1765651 Msa0187030:CDS
AGGCTGAAAATTTAGTGCAG+AGG 0.599417 2_1:-1764652 Msa0187030:CDS
GTTCTTCAGATTGATTCAGA+CGG 0.599426 2_1:-1763192 Msa0187030:CDS
AGATAAAGTTGAACTTCTAG+AGG 0.607959 2_1:-1762926 Msa0187030:CDS
AACTTAACTTCTCTTCCACC+AGG 0.608738 2_1:-1764361 Msa0187030:CDS
CTTCAGCAGCATCAATCTGA+GGG 0.616282 2_1:-1763027 Msa0187030:CDS
ACTTCAGCAGCATCAATCTG+AGG 0.617113 2_1:-1763028 Msa0187030:CDS
GCAGAATGCAACAACAGCAC+AGG 0.617418 2_1:+1767151 None:intergenic
AGAAAACTGAAGATGACAAG+AGG 0.617447 2_1:-1761139 Msa0187030:CDS
ACTATGTTAGGTACAAGATA+CGG 0.617952 2_1:-1767241 Msa0187030:intron
TAGAGGAGAACAGGCAACTG+AGG 0.619446 2_1:-1762909 Msa0187030:CDS
GAATGCAACAACAGCACAGG+TGG 0.622163 2_1:+1767154 None:intergenic
GCTGAGGAAAACAACAACAA+AGG 0.622467 2_1:-1760801 Msa0187030:CDS
AAACTGAAGATGACAAGAGG+AGG 0.626445 2_1:-1761136 Msa0187030:CDS
CAGAAATGTACTATAAGAAG+CGG 0.627422 2_1:-1765624 Msa0187030:CDS
ATCCTTCTGAACTACCACTC+TGG 0.627692 2_1:+1765024 None:intergenic
ATGAGAGTGATTCAGCATCA+GGG 0.629773 2_1:+1765431 None:intergenic
ACTTTGGGAGAATGAGGCTG+CGG 0.631172 2_1:-1762161 Msa0187030:CDS
AATGTACTATAAGAAGCGGC+CGG 0.632296 2_1:-1765620 Msa0187030:CDS
GAACAAAATAAACCTTGCTG+AGG 0.634726 2_1:-1764951 Msa0187030:CDS
TTCCAGAATCATCTGAACGA+TGG 0.639813 2_1:+1761243 None:intergenic
TGAATATGGAGTCGATTCTG+TGG 0.641959 2_1:+1761538 None:intergenic
TCTTGTTGATTGAGAAAATG+GGG 0.647754 2_1:-1768132 Msa0187030:five_prime_UTR
CTAAATGATGATTCACCATG+CGG 0.648235 2_1:-1765463 Msa0187030:CDS
AGCAATATATCGCACAGTGT+CGG 0.652496 2_1:+1768203 None:intergenic
AACGATGGCAGATCATAGCA+TGG 0.653931 2_1:+1761258 None:intergenic
TCATGAAGTTGAACAACACA+GGG 0.656703 2_1:-1762236 Msa0187030:CDS
AAGGCACAAAATAATGCTAG+AGG 0.660058 2_1:-1765235 Msa0187030:CDS
ACAAGAGGAGGATCTTGGAG+AGG 0.666942 2_1:-1761124 Msa0187030:CDS
CGTATCTCTCTGCTAACGCA+CGG 0.666945 2_1:+1765560 None:intergenic
AAGCAGATTCATTTGCAAGG+AGG 0.667881 2_1:-1765648 Msa0187030:CDS
GAGATACGATCATGCAATGG+GGG 0.670489 2_1:-1765545 Msa0187030:CDS
AGTGAAATTGGAGAACTGAA+GGG 0.674625 2_1:-1761983 Msa0187030:CDS
TCAGGGCCTAAAGAACCGCA+TGG 0.677474 2_1:+1765448 None:intergenic
ACTGCAAACTCTGATGCATG+GGG 0.682602 2_1:-1764579 Msa0187030:CDS
AGGCTGAGATGATAGAATTG+CGG 0.685463 2_1:-1762825 Msa0187030:CDS
CATTCCACTTGATCGCAATG+TGG 0.687381 2_1:-1761390 Msa0187030:CDS
GCTGTTCTTCCTGTAGTACG+TGG 0.694339 2_1:+1763481 None:intergenic
GGAACTCATGAAGTTAGTGG+AGG 0.698000 2_1:-1765599 Msa0187030:CDS
ATGGATATCCATAAAGTGTG+TGG 0.698783 2_1:-1763216 Msa0187030:CDS
GGAAATGGAGAAAAGGCTGG+AGG 0.704636 2_1:-1762455 Msa0187030:CDS
AGAGATACGATCATGCAATG+GGG 0.707004 2_1:-1765546 Msa0187030:CDS
ATCTGAATGAGTCAACTGAG+AGG 0.716151 2_1:-1762495 Msa0187030:CDS
AAAGCAAGAACTTACCAGAG+TGG 0.717213 2_1:-1765038 Msa0187030:CDS
TCTGGACTCAGATTCTGACA+AGG 0.717887 2_1:+1767114 None:intergenic
AATGGAAACAGATCTTAACA+AGG 0.722210 2_1:-1765254 Msa0187030:CDS
TGCGTGTTTGTGGATGTTCG+GGG 0.733508 2_1:-1760731 Msa0187030:CDS
GAACAGTGCAATGTTCCATG+AGG 0.738461 2_1:-1762692 Msa0187030:CDS
ACGTACTACAGGAAGAACAG+CGG 0.777669 2_1:-1763479 Msa0187030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAAAAAAAAAAAGTTA+AGG + chr2_1:1761188-1761207 None:intergenic 10.0%
!! TTAGAGATATAAATATTTAT+AGG - chr2_1:1762382-1762401 Msa0187030:CDS 10.0%
!! GAAATTTACTAAATTATATT+AGG + chr2_1:1762814-1762833 None:intergenic 10.0%
!!! TATGATATAATTTTTCAACA+TGG - chr2_1:1761075-1761094 Msa0187030:CDS 15.0%
!!! AGCATAATATGAAATTTTAA+TGG + chr2_1:1762940-1762959 None:intergenic 15.0%
!!! AATTTTGTTTTTTAGTTGTT+CGG + chr2_1:1763909-1763928 None:intergenic 15.0%
!!! ATTTTCTGATAAAGTAATTT+CGG - chr2_1:1765350-1765369 Msa0187030:CDS 15.0%
!! ATTCAACAAAACAAAAAAGT+TGG + chr2_1:1760563-1760582 None:intergenic 20.0%
!!! AATGTCAAATTTTATGATTG+TGG - chr2_1:1760610-1760629 Msa0187030:three_prime_UTR 20.0%
!!! ATGTCAAATTTTATGATTGT+GGG - chr2_1:1760611-1760630 Msa0187030:three_prime_UTR 20.0%
!! AATTTCTATGATCAAACAAA+AGG + chr2_1:1760938-1760957 None:intergenic 20.0%
!! ATGGACAAAGTTAAATATAA+TGG + chr2_1:1760985-1761004 None:intergenic 20.0%
!!! AGGATGAAAAATGTATTTTT+TGG - chr2_1:1761018-1761037 Msa0187030:CDS 20.0%
!!! GCTTAAAAAGTTTTTCTTTT+AGG - chr2_1:1761153-1761172 Msa0187030:CDS 20.0%
!! TTAATATATGAGAGTAAAGT+TGG - chr2_1:1761362-1761381 Msa0187030:CDS 20.0%
!!! TATGTGGAAAGTTATTATTT+TGG + chr2_1:1761855-1761874 None:intergenic 20.0%
!!! CCTTAATAATATTTTACAGA+AGG + chr2_1:1761898-1761917 None:intergenic 20.0%
!! CCTTCTGTAAAATATTATTA+AGG - chr2_1:1761895-1761914 Msa0187030:CDS 20.0%
!! AAATATTATTAAGGTAGCTT+CGG - chr2_1:1761904-1761923 Msa0187030:CDS 20.0%
!!! AGTTGATATTTATAGAGTAT+AGG + chr2_1:1761971-1761990 None:intergenic 20.0%
!!! ATTCAGATAAATCATTTTGT+TGG - chr2_1:1762045-1762064 Msa0187030:CDS 20.0%
!!! ATATTTTTGAGAGACTAATT+TGG + chr2_1:1762213-1762232 None:intergenic 20.0%
!! TAATTCATTGAAACATTCTT+TGG - chr2_1:1762312-1762331 Msa0187030:CDS 20.0%
!! AAATTATATTAGGGAATACA+GGG + chr2_1:1762804-1762823 None:intergenic 20.0%
!! TAAATTATATTAGGGAATAC+AGG + chr2_1:1762805-1762824 None:intergenic 20.0%
!! TAAGAATTTACAAGATAGAA+TGG + chr2_1:1762849-1762868 None:intergenic 20.0%
!! AAAAAACAAAATTGAGAAAG+AGG - chr2_1:1763916-1763935 Msa0187030:CDS 20.0%
!!! AAAATCAAAAGAAGTTTTGA+TGG - chr2_1:1764615-1764634 Msa0187030:CDS 20.0%
!!! TTTTTTCTATTGTCAACTTT+TGG + chr2_1:1767169-1767188 None:intergenic 20.0%
!! AAAAGTTGACAATAGAAAAA+AGG - chr2_1:1767168-1767187 Msa0187030:five_prime_UTR 20.0%
!!! TTCATCAATAACCTTATTTT+AGG + chr2_1:1767247-1767266 None:intergenic 20.0%
!! AGTAAGTATAAATGATCAAA+TGG - chr2_1:1767717-1767736 Msa0187030:intron 20.0%
!!! TTTTGTTTTGTTGAATCATC+TGG - chr2_1:1760567-1760586 Msa0187030:three_prime_UTR 25.0%
!! TGTCAAATTTTATGATTGTG+GGG - chr2_1:1760612-1760631 Msa0187030:three_prime_UTR 25.0%
! ATCACCAAAATTAAGCAAAA+GGG + chr2_1:1760695-1760714 None:intergenic 25.0%
! TATCACCAAAATTAAGCAAA+AGG + chr2_1:1760696-1760715 None:intergenic 25.0%
! CATATCTATTACAAGTTTGT+AGG - chr2_1:1760771-1760790 Msa0187030:CDS 25.0%
!!! ATGTATTTTTTGGTTGTACT+TGG - chr2_1:1761028-1761047 Msa0187030:CDS 25.0%
! ATATCATAAATTGCAAAGCA+GGG + chr2_1:1761063-1761082 None:intergenic 25.0%
! TATATCATAAATTGCAAAGC+AGG + chr2_1:1761064-1761083 None:intergenic 25.0%
!!! ATAATTTTTCAACATGGTTG+TGG - chr2_1:1761081-1761100 Msa0187030:CDS 25.0%
! TTCAGAAAATTCTATATCGA+AGG + chr2_1:1761230-1761249 None:intergenic 25.0%
! TGCATTATTACCTTTCAAAT+TGG + chr2_1:1761305-1761324 None:intergenic 25.0%
! ATCAGAACAATACTAATATC+AGG - chr2_1:1761466-1761485 Msa0187030:CDS 25.0%
! ATAGTCCAAAGAATTCAAAA+TGG - chr2_1:1761600-1761619 Msa0187030:CDS 25.0%
! GTTAGTTGTTAAATTATTCG+CGG - chr2_1:1761747-1761766 Msa0187030:intron 25.0%
!!! TGGAAAGTTATTATTTTGGT+AGG + chr2_1:1761851-1761870 None:intergenic 25.0%
! TTTATAGAGTATAGGATGTA+TGG + chr2_1:1761963-1761982 None:intergenic 25.0%
! TGCAACAAATTATACAAATC+TGG + chr2_1:1762020-1762039 None:intergenic 25.0%
!! AATCATTTTGTTGGAGAAAT+AGG - chr2_1:1762054-1762073 Msa0187030:CDS 25.0%
!! ATCATTTTGTTGGAGAAATA+GGG - chr2_1:1762055-1762074 Msa0187030:CDS 25.0%
! GTTTAGCAAAAGAACAAATT+TGG + chr2_1:1762238-1762257 None:intergenic 25.0%
! CGACAAATGTATATCTTTAA+AGG - chr2_1:1762287-1762306 Msa0187030:CDS 25.0%
! ATATAGTTGAATCTCACTTT+AGG - chr2_1:1762546-1762565 Msa0187030:CDS 25.0%
! ACATAATAAGTTCGTTGTTT+GGG - chr2_1:1762577-1762596 Msa0187030:CDS 25.0%
!!! CAAGCAAGTTTTATTTCATT+AGG + chr2_1:1762620-1762639 None:intergenic 25.0%
!! ATGAAATAAAACTTGCTTGT+TGG - chr2_1:1762621-1762640 Msa0187030:CDS 25.0%
! AAAGATTAACAACAAGCTTT+AGG + chr2_1:1762675-1762694 None:intergenic 25.0%
! TTTACTACACCTATTATCTA+TGG - chr2_1:1762694-1762713 Msa0187030:CDS 25.0%
!!! ACTTTTAGCTATTACATATC+TGG - chr2_1:1762722-1762741 Msa0187030:CDS 25.0%
! TAGTAAATTTCACTGCAAAA+TGG - chr2_1:1762823-1762842 Msa0187030:CDS 25.0%
!!! TTTAATGGACTAAACTATAG+AGG + chr2_1:1762925-1762944 None:intergenic 25.0%
!!! TTCTTTTTTGATCGATGAAT+TGG + chr2_1:1763263-1763282 None:intergenic 25.0%
! ATCGATCAAAAAAGAATGAA+AGG - chr2_1:1763267-1763286 Msa0187030:CDS 25.0%
! AATTCAAGTCGTAATATTGA+AGG - chr2_1:1763475-1763494 Msa0187030:CDS 25.0%
!!! TTTATTTTGTTCTCCAACAT+TGG + chr2_1:1763701-1763720 None:intergenic 25.0%
!! ACTTTCCAAACAAGATTTTA+AGG - chr2_1:1764234-1764253 Msa0187030:CDS 25.0%
! AAGCATTCTAATATCTCAAT+TGG - chr2_1:1764957-1764976 Msa0187030:CDS 25.0%
!! AGAACTTTTTGCTTCAATTT+TGG - chr2_1:1765086-1765105 Msa0187030:CDS 25.0%
! AAATAGATCAAAGTCTACTT+TGG - chr2_1:1765803-1765822 Msa0187030:intron 25.0%
! ACGAGAAAAAATCATTGTTT+AGG - chr2_1:1765901-1765920 Msa0187030:intron 25.0%
! ATCATTGTTTAGGAATGTTT+CGG - chr2_1:1765911-1765930 Msa0187030:intron 25.0%
! ATGTTTCATTTGCTTCATTA+AGG + chr2_1:1766379-1766398 None:intergenic 25.0%
! AAGAAAATGAGTTCAAACTT+TGG - chr2_1:1766483-1766502 Msa0187030:intron 25.0%
! AGAAAATGAGTTCAAACTTT+GGG - chr2_1:1766484-1766503 Msa0187030:intron 25.0%
!!! TCTTTTAAAGAAGAAACGAT+GGG + chr2_1:1766722-1766741 None:intergenic 25.0%
!!! GTATATGAATATTTTTGTCC+AGG - chr2_1:1766925-1766944 Msa0187030:intron 25.0%
! GGAGAAAAAAACCTAAAATA+AGG - chr2_1:1767233-1767252 Msa0187030:five_prime_UTR 25.0%
! GAAGTTAGCTATTCTTAAAA+TGG - chr2_1:1767576-1767595 Msa0187030:intron 25.0%
! ACAAGACTTGAAAAAGAAAA+CGG - chr2_1:1767603-1767622 Msa0187030:intron 25.0%
! AATAGAATATCTCGAAAAAC+AGG - chr2_1:1767886-1767905 Msa0187030:intron 25.0%
!! TTAAGTGCATTGTTTCATTT+TGG - chr2_1:1767991-1768010 Msa0187030:five_prime_UTR 25.0%
!! CCAATTTTACTAGCTAAATT+AGG + chr2_1:1768046-1768065 None:intergenic 25.0%
! CCTAATTTAGCTAGTAAAAT+TGG - chr2_1:1768043-1768062 Msa0187030:five_prime_UTR 25.0%
! TAGTATATGTTCCATAAAGA+AGG + chr2_1:1768223-1768242 None:intergenic 25.0%
! TTCTTTATGGAACATATACT+AGG - chr2_1:1768222-1768241 Msa0187030:five_prime_UTR 25.0%
!! TGTATCATTGTCTTTGAAGT+GGG + chr2_1:1760488-1760507 None:intergenic 30.0%
! TTGTATCATTGTCTTTGAAG+TGG + chr2_1:1760489-1760508 None:intergenic 30.0%
! TGTCTTGTTGATTGAGAAAA+TGG - chr2_1:1760526-1760545 Msa0187030:three_prime_UTR 30.0%
! GTCTTGTTGATTGAGAAAAT+GGG - chr2_1:1760527-1760546 Msa0187030:three_prime_UTR 30.0%
! TCTTGTTGATTGAGAAAATG+GGG - chr2_1:1760528-1760547 Msa0187030:three_prime_UTR 30.0%
! AATTTTATGATTGTGGGGTT+TGG - chr2_1:1760617-1760636 Msa0187030:three_prime_UTR 30.0%
TATGAAACTTTGAATGAGTC+TGG + chr2_1:1760651-1760670 None:intergenic 30.0%
! AACTTCAAGTTCATTCACTT+TGG - chr2_1:1760734-1760753 Msa0187030:CDS 30.0%
TCTATTACAAGTTTGTAGGT+TGG - chr2_1:1760775-1760794 Msa0187030:CDS 30.0%
TTCTATGATCAAACAAAAGG+AGG + chr2_1:1760935-1760954 None:intergenic 30.0%
TTGATCATAGAAATTGCACT+TGG - chr2_1:1760943-1760962 Msa0187030:CDS 30.0%
TGATCATAGAAATTGCACTT+GGG - chr2_1:1760944-1760963 Msa0187030:CDS 30.0%
TGTCCATACAAAAGTTAATC+AGG - chr2_1:1760998-1761017 Msa0187030:CDS 30.0%
! CATCCTGATTAACTTTTGTA+TGG + chr2_1:1761004-1761023 None:intergenic 30.0%
!! TTTTGGTTGTACTTGGATTT+TGG - chr2_1:1761035-1761054 Msa0187030:CDS 30.0%
AGCAGAAAGTTTCAAATACT+TGG + chr2_1:1761116-1761135 None:intergenic 30.0%
AGCTCAAGATTATGAAAGTT+AGG + chr2_1:1761278-1761297 None:intergenic 30.0%
TAATAATGCAGCATCAATGT+TGG - chr2_1:1761315-1761334 Msa0187030:CDS 30.0%
TTCGTTAAATGCACTATGTT+AGG - chr2_1:1761407-1761426 Msa0187030:CDS 30.0%
ACTATGTTAGGTACAAGATA+CGG - chr2_1:1761419-1761438 Msa0187030:CDS 30.0%
TTGAATTCTTTGGACTATTG+TGG + chr2_1:1761598-1761617 None:intergenic 30.0%
!! AGAAGCCATTTTGAATTCTT+TGG + chr2_1:1761608-1761627 None:intergenic 30.0%
AAAGAATTCAAAATGGCTTC+TGG - chr2_1:1761607-1761626 Msa0187030:CDS 30.0%
!!! TATTTTGGTAGGTTTTGTTG+TGG + chr2_1:1761840-1761859 None:intergenic 30.0%
TATACAAATCTGGTGAAACT+TGG + chr2_1:1762010-1762029 None:intergenic 30.0%
TTCATTGAAACATTCTTTGG+AGG - chr2_1:1762315-1762334 Msa0187030:CDS 30.0%
ATTCTGATCGAATAAATCCA+TGG + chr2_1:1762445-1762464 None:intergenic 30.0%
GACATAATAAGTTCGTTGTT+TGG - chr2_1:1762576-1762595 Msa0187030:CDS 30.0%
!!! GCAAGTTTTATTTCATTAGG+TGG + chr2_1:1762617-1762636 None:intergenic 30.0%
!! TTTGTTGTTGTAATTTCCCT+AGG - chr2_1:1762647-1762666 Msa0187030:CDS 30.0%
AAGTATGCACCATAGATAAT+AGG + chr2_1:1762706-1762725 None:intergenic 30.0%
TTTAGCTATTACATATCTGG+TGG - chr2_1:1762725-1762744 Msa0187030:CDS 30.0%
TGTGAAAGATACTATCAGTA+AGG - chr2_1:1762874-1762893 Msa0187030:CDS 30.0%
CAGAAATGTACTATAAGAAG+CGG - chr2_1:1763036-1763055 Msa0187030:CDS 30.0%
AGAATGTAATATGCTGAGTT+GGG + chr2_1:1763179-1763198 None:intergenic 30.0%
TAGAATGTAATATGCTGAGT+TGG + chr2_1:1763180-1763199 None:intergenic 30.0%
! TTTTTGATCGATGAATTGGT+CGG + chr2_1:1763259-1763278 None:intergenic 30.0%
AGGAGTTCAGAAAAATCTAA+TGG - chr2_1:1763287-1763306 Msa0187030:CDS 30.0%
TTTGGAGAAGTTATCCAAAA+TGG - chr2_1:1763388-1763407 Msa0187030:CDS 30.0%
! GTTAAGATCTGTTTCCATTT+TGG + chr2_1:1763405-1763424 None:intergenic 30.0%
AATGGAAACAGATCTTAACA+AGG - chr2_1:1763406-1763425 Msa0187030:CDS 30.0%
!! AAGTTCTTGCTTTAGGTTTT+TGG + chr2_1:1763615-1763634 None:intergenic 30.0%
TCTTGAAAAGATTCCAATGT+TGG - chr2_1:1763685-1763704 Msa0187030:CDS 30.0%
AATTTGATCATTAAGCATCC+TGG + chr2_1:1763741-1763760 None:intergenic 30.0%
ATTGAGGAAAAATCTTTCTG+AGG - chr2_1:1763787-1763806 Msa0187030:CDS 30.0%
! CCATTTTAGATATTTTCTCC+AGG + chr2_1:1763856-1763875 None:intergenic 30.0%
CCTGGAGAAAATATCTAAAA+TGG - chr2_1:1763853-1763872 Msa0187030:CDS 30.0%
!! TTGCTTTGGAGCTTAAATAT+GGG - chr2_1:1764188-1764207 Msa0187030:CDS 30.0%
CTCTTCCTTAAAATCTTGTT+TGG + chr2_1:1764242-1764261 None:intergenic 30.0%
GTCATTAAAAAAGCAGCAAA+TGG - chr2_1:1764321-1764340 Msa0187030:CDS 30.0%
! AATGGAAATCTCTAAGTTGA+AGG - chr2_1:1764339-1764358 Msa0187030:CDS 30.0%
GCATGAAACTCATCAAATAA+AGG - chr2_1:1764423-1764442 Msa0187030:CDS 30.0%
TAACAGAGAAAATTCCATAC+AGG + chr2_1:1764647-1764666 None:intergenic 30.0%
! TGTATGGAATTTTCTCTGTT+AGG - chr2_1:1764646-1764665 Msa0187030:CDS 30.0%
! ATTTTTCTTCTTGGAGAACT+TGG + chr2_1:1764729-1764748 None:intergenic 30.0%
!! CAAGAATGGATTTTTCTTCT+TGG + chr2_1:1764738-1764757 None:intergenic 30.0%
! TGAAAGTATGCAGAAGATAT+TGG - chr2_1:1764801-1764820 Msa0187030:CDS 30.0%
GATGCTAAAATTGAGTTTGA+AGG - chr2_1:1764856-1764875 Msa0187030:CDS 30.0%
GAAGGTTTGAGAATTAAATC+AGG - chr2_1:1764874-1764893 Msa0187030:CDS 30.0%
GAGAATTAAATCAGGTGATT+TGG - chr2_1:1764882-1764901 Msa0187030:CDS 30.0%
ACTAAGTAACCTTGAAAAGA+AGG - chr2_1:1764996-1765015 Msa0187030:CDS 30.0%
! ACTTTGTAACCTTCTTTTCA+AGG + chr2_1:1765008-1765027 None:intergenic 30.0%
TGAAAAGAAGGTTACAAAGT+TGG - chr2_1:1765008-1765027 Msa0187030:CDS 30.0%
GCAAAATTGTATTGAAGAGT+TGG - chr2_1:1765272-1765291 Msa0187030:CDS 30.0%
AATTCCAATATCGCGTATAT+TGG - chr2_1:1765521-1765540 Msa0187030:CDS 30.0%
AGATAAAGTTGAACTTCTAG+AGG - chr2_1:1765734-1765753 Msa0187030:intron 30.0%
CAAGTGTTTCAAGAAGAAAA+TGG - chr2_1:1765867-1765886 Msa0187030:intron 30.0%
GAGAGAAATAATCAGTTTAC+TGG - chr2_1:1766652-1766671 Msa0187030:intron 30.0%
AGTTTACTGGAAAGTGAAAT+TGG - chr2_1:1766665-1766684 Msa0187030:intron 30.0%
!! CTCTTTTAAAGAAGAAACGA+TGG + chr2_1:1766723-1766742 None:intergenic 30.0%
! CATCGTTTCTTCTTTAAAAG+AGG - chr2_1:1766721-1766740 Msa0187030:intron 30.0%
! AATTTCTTTTAGTCCAAAGG+CGG + chr2_1:1766772-1766791 None:intergenic 30.0%
! CAGAATTTCTTTTAGTCCAA+AGG + chr2_1:1766775-1766794 None:intergenic 30.0%
TTGGACTAAAAGAAATTCTG+TGG - chr2_1:1766775-1766794 Msa0187030:intron 30.0%
ACTAAAAGAAATTCTGTGGT+AGG - chr2_1:1766779-1766798 Msa0187030:intron 30.0%
! TGATTTGGCAAAGAGAAAAA+GGG + chr2_1:1766870-1766889 None:intergenic 30.0%
AGCAGTTGAAAAGATTATGA+TGG - chr2_1:1767063-1767082 Msa0187030:CDS 30.0%
GCAATTTCCAAACTTGAATA+TGG + chr2_1:1767139-1767158 None:intergenic 30.0%
! ATTGTCAACTTTTGGATATG+TGG + chr2_1:1767161-1767180 None:intergenic 30.0%
AAAAAAGGAGATTGAACTTG+TGG - chr2_1:1767183-1767202 Msa0187030:five_prime_UTR 30.0%
!!! GTTTTTTTCTCCATGAATTG+CGG + chr2_1:1767225-1767244 None:intergenic 30.0%
TCTAAATTACTCCTCAGAAT+TGG - chr2_1:1767444-1767463 Msa0187030:intron 30.0%
AAGACATATAGAAGAAGTTG+AGG - chr2_1:1767678-1767697 Msa0187030:intron 30.0%
CCAATTTCAGCAATATGTAT+TGG + chr2_1:1767840-1767859 None:intergenic 30.0%
CCAATACATATTGCTGAAAT+TGG - chr2_1:1767837-1767856 Msa0187030:intron 30.0%
AAACAGGTATATTGTTGAGA+AGG - chr2_1:1767902-1767921 Msa0187030:five_prime_UTR 30.0%
AGTTAATCCTCATTAGTTGA+TGG + chr2_1:1767955-1767974 None:intergenic 30.0%
!!! AGTCACTCAGTAACATTTTT+TGG + chr2_1:1768127-1768146 None:intergenic 30.0%
! TGTTGTGTTTTCCTTCTTTA+TGG - chr2_1:1768209-1768228 Msa0187030:five_prime_UTR 30.0%
!! TTGTTGAATCATCTGGTTCT+TGG - chr2_1:1760574-1760593 Msa0187030:three_prime_UTR 35.0%
! GACACCCTTTTGCTTAATTT+TGG - chr2_1:1760688-1760707 Msa0187030:three_prime_UTR 35.0%
! CTCTCTCAATCATTTTGCAT+AGG - chr2_1:1760876-1760895 Msa0187030:CDS 35.0%
! GTTCTGATTTGAAACTCTTC+AGG + chr2_1:1761454-1761473 None:intergenic 35.0%
ACTATTGTGCTTGAAGAATC+TGG - chr2_1:1761678-1761697 Msa0187030:CDS 35.0%
!!! CAGCTTTTTTATCATGAAGC+AGG + chr2_1:1761728-1761747 None:intergenic 35.0%
!!! ATGCAGCACTTATTTTACTC+TGG + chr2_1:1761798-1761817 None:intergenic 35.0%
! TAAGCTGTAGTCACTTTATG+TGG + chr2_1:1761871-1761890 None:intergenic 35.0%
TGGAGAATTTGACACCATAA+TGG - chr2_1:1761933-1761952 Msa0187030:CDS 35.0%
AGAATTTGACACCATAATGG+AGG - chr2_1:1761936-1761955 Msa0187030:CDS 35.0%
! AAGAGAATCAGAAAGTGCAT+AGG + chr2_1:1762087-1762106 None:intergenic 35.0%
GACAGTACACTAATCTATGA+GGG + chr2_1:1762161-1762180 None:intergenic 35.0%
TGACAGTACACTAATCTATG+AGG + chr2_1:1762162-1762181 None:intergenic 35.0%
AACCACTTTAGTCGTTCATA+TGG - chr2_1:1762255-1762274 Msa0187030:CDS 35.0%
AGTCGTTCATATGGACATAT+TGG - chr2_1:1762264-1762283 Msa0187030:CDS 35.0%
ATCTGTCAGAGTTAGAGTAT+GGG + chr2_1:1762777-1762796 None:intergenic 35.0%
AATGATCAAGCTCATTGAAG+AGG - chr2_1:1762989-1763008 Msa0187030:CDS 35.0%
CTAAATGATGATTCACCATG+CGG - chr2_1:1763197-1763216 Msa0187030:CDS 35.0%
! TTTTGATCGATGAATTGGTC+GGG + chr2_1:1763258-1763277 None:intergenic 35.0%
ATGGTGAAGTTCAAACCTTA+AGG - chr2_1:1763306-1763325 Msa0187030:CDS 35.0%
TGGTGAAGTTCAAACCTTAA+GGG - chr2_1:1763307-1763326 Msa0187030:CDS 35.0%
! ATCCTTATCAGACTGGATTT+TGG + chr2_1:1763342-1763361 None:intergenic 35.0%
AAGGCACAAAATAATGCTAG+AGG - chr2_1:1763425-1763444 Msa0187030:CDS 35.0%
TCTAGAAACTATAGCTAGAC+TGG - chr2_1:1763556-1763575 Msa0187030:CDS 35.0%
GAACAAAATAAACCTTGCTG+AGG - chr2_1:1763709-1763728 Msa0187030:CDS 35.0%
TCAAATTGAAAGAACAGAGC+TGG - chr2_1:1763754-1763773 Msa0187030:CDS 35.0%
! GAGATTTCTGAAAAACATCG+TGG - chr2_1:1763950-1763969 Msa0187030:CDS 35.0%
TGAAAAACATCGTGGTATGT+TGG - chr2_1:1763958-1763977 Msa0187030:CDS 35.0%
AAACCGAAATCTTCAGTTAG+AGG - chr2_1:1763988-1764007 Msa0187030:CDS 35.0%
TCAAATTGAATCAGCTCTAC+AGG - chr2_1:1764120-1764139 Msa0187030:CDS 35.0%
GTTGTACTCTCAATCACAAA+AGG - chr2_1:1764153-1764172 Msa0187030:CDS 35.0%
!! CTTGCTTTGGAGCTTAAATA+TGG - chr2_1:1764187-1764206 Msa0187030:CDS 35.0%
!!! TTGCTGCTTTTTTAATGACC+TGG + chr2_1:1764320-1764339 None:intergenic 35.0%
TTTGATGAGTTTCATGCTTG+AGG + chr2_1:1764420-1764439 None:intergenic 35.0%
CTTGAACAACTACAGAGTTT+AGG - chr2_1:1764484-1764503 Msa0187030:CDS 35.0%
! TCTGAATCCCAATTCTTTTG+CGG - chr2_1:1764507-1764526 Msa0187030:CDS 35.0%
GCTAAAAGAAGACTGCAAAA+AGG - chr2_1:1764564-1764583 Msa0187030:CDS 35.0%
TTTGATGGAAAATGCCTGTA+TGG - chr2_1:1764630-1764649 Msa0187030:CDS 35.0%
TGATTTCTCATCAGCAAGAA+TGG + chr2_1:1764752-1764771 None:intergenic 35.0%
ATTGGAGAATAATACCTTGC+TGG - chr2_1:1764819-1764838 Msa0187030:CDS 35.0%
!! CTCAATTTTAGCATCAGAGA+GGG + chr2_1:1764851-1764870 None:intergenic 35.0%
!! ACTCAATTTTAGCATCAGAG+AGG + chr2_1:1764852-1764871 None:intergenic 35.0%
GGAAGAAAAATATGCTGATG+TGG - chr2_1:1765029-1765048 Msa0187030:CDS 35.0%
TGAATGTGAAAAACTCGTTG+AGG - chr2_1:1765320-1765339 Msa0187030:CDS 35.0%
TGATAAAGTAATTTCGGAGC+TGG - chr2_1:1765356-1765375 Msa0187030:CDS 35.0%
ATGGATATCCATAAAGTGTG+TGG - chr2_1:1765444-1765463 Msa0187030:CDS 35.0%
! GTTCTTCAGATTGATTCAGA+CGG - chr2_1:1765468-1765487 Msa0187030:CDS 35.0%
TTGTCCAATATACGCGATAT+TGG + chr2_1:1765528-1765547 None:intergenic 35.0%
ATTGGACAAAATTGAGAGCT+TGG - chr2_1:1765539-1765558 Msa0187030:CDS 35.0%
TTCTCTAGTGAAAAGTCAAG+AGG - chr2_1:1765566-1765585 Msa0187030:CDS 35.0%
TGAGGGAGAAAAACTTAAGT+CGG - chr2_1:1765650-1765669 Msa0187030:CDS 35.0%
CTGAGGATTGAAGTAGTAAA+TGG - chr2_1:1765768-1765787 Msa0187030:intron 35.0%
GATTGAAGTAGTAAATGGAC+TGG - chr2_1:1765773-1765792 Msa0187030:intron 35.0%
AGCTCTCATAAACCAAATTG+AGG + chr2_1:1766010-1766029 None:intergenic 35.0%
GGTTAAGGTCATTGTTCAAA+TGG + chr2_1:1766091-1766110 None:intergenic 35.0%
AATGACCTTAACCAAGAACT+TGG - chr2_1:1766098-1766117 Msa0187030:intron 35.0%
! AGTGTTCAGGAAGAATTTTG+AGG - chr2_1:1766121-1766140 Msa0187030:intron 35.0%
! AGAGTTTTCCAGACATATTG+AGG - chr2_1:1766247-1766266 Msa0187030:intron 35.0%
CAGACAGATTCTTGAACAAT+CGG - chr2_1:1766319-1766338 Msa0187030:intron 35.0%
TTCATGAAGTTGAACAACAC+AGG - chr2_1:1766423-1766442 Msa0187030:intron 35.0%
TCATGAAGTTGAACAACACA+GGG - chr2_1:1766424-1766443 Msa0187030:intron 35.0%
TTTAGCACTGTTAGAAAGCA+AGG - chr2_1:1766556-1766575 Msa0187030:intron 35.0%
AAGTGAAATTGGAGAACTGA+AGG - chr2_1:1766676-1766695 Msa0187030:intron 35.0%
AGTGAAATTGGAGAACTGAA+GGG - chr2_1:1766677-1766696 Msa0187030:intron 35.0%
! ATTTCTTTTAGTCCAAAGGC+GGG + chr2_1:1766771-1766790 None:intergenic 35.0%
!! CTGATTTGGCAAAGAGAAAA+AGG + chr2_1:1766871-1766890 None:intergenic 35.0%
TGCAAATTGTGAAGCTGATT+TGG + chr2_1:1766885-1766904 None:intergenic 35.0%
! CATTTTCTCTTGCACTTTGA+TGG + chr2_1:1766985-1767004 None:intergenic 35.0%
! GAAAGTGTGTTAATACCAGA+TGG - chr2_1:1767004-1767023 Msa0187030:intron 35.0%
! ATCGACTCCATATTCAAGTT+TGG - chr2_1:1767129-1767148 Msa0187030:exon 35.0%
ATGTATTTGACCGCAATTCA+TGG - chr2_1:1767212-1767231 Msa0187030:five_prime_UTR 35.0%
ATTGGACATAGAGAAGGAAT+TGG - chr2_1:1767462-1767481 Msa0187030:intron 35.0%
TTGGACATAGAGAAGGAATT+GGG - chr2_1:1767463-1767482 Msa0187030:intron 35.0%
AGAAAACTGAAGATGACAAG+AGG - chr2_1:1767521-1767540 Msa0187030:intron 35.0%
ACAAAGAAGAAAAGCAAGCA+AGG - chr2_1:1767628-1767647 Msa0187030:intron 35.0%
ATTTGTTCAGAACCTCTTCT+TGG + chr2_1:1767787-1767806 None:intergenic 35.0%
!! AGAAGAGGTTCTGAACAAAT+AGG - chr2_1:1767787-1767806 Msa0187030:intron 35.0%
AATAGGAAAGTTGCAGTTTG+AGG - chr2_1:1767804-1767823 Msa0187030:intron 35.0%
CTGAGGAAAACAACAACAAA+GGG - chr2_1:1767860-1767879 Msa0187030:intron 35.0%
!! TTTTGGAAGCTAAAGCATAC+AGG + chr2_1:1768110-1768129 None:intergenic 35.0%
AGCAATATATCGCACAGTGT+CGG + chr2_1:1760460-1760479 None:intergenic 40.0%
GTTGATTGAGAAAATGGGGT+AGG - chr2_1:1760532-1760551 Msa0187030:three_prime_UTR 40.0%
!! TTGAATCATCTGGTTCTTGG+TGG - chr2_1:1760577-1760596 Msa0187030:three_prime_UTR 40.0%
ATAGAAATTGCACTTGGGTG+AGG - chr2_1:1760949-1760968 Msa0187030:CDS 40.0%
TGAGCTGTGACCAATTTGAA+AGG - chr2_1:1761292-1761311 Msa0187030:CDS 40.0%
GTTGCATTCTGCTAGAGTTA+TGG - chr2_1:1761520-1761539 Msa0187030:CDS 40.0%
AGTCCAGACGCTTATATTCT+TGG - chr2_1:1761561-1761580 Msa0187030:CDS 40.0%
! ACGCTTATATTCTTGGTGGT+GGG - chr2_1:1761568-1761587 Msa0187030:CDS 40.0%
! TGGCTTCTGGAAAATCTTAC+AGG - chr2_1:1761620-1761639 Msa0187030:CDS 40.0%
! ACACTAATCTATGAGGGCAT+TGG + chr2_1:1762155-1762174 None:intergenic 40.0%
GTCCATATGAACGACTAAAG+TGG + chr2_1:1762260-1762279 None:intergenic 40.0%
! CATTCTTTGGAGGTCAACTA+TGG - chr2_1:1762325-1762344 Msa0187030:CDS 40.0%
TTATTTCGAAGACCAAGCCA+TGG - chr2_1:1762425-1762444 Msa0187030:CDS 40.0%
GATCGAATAAATCCATGGCT+TGG + chr2_1:1762440-1762459 None:intergenic 40.0%
GAATCTCACTTTAGGTGTTC+TGG - chr2_1:1762554-1762573 Msa0187030:CDS 40.0%
!! CAACAAGCTTTAGGATCCTA+GGG + chr2_1:1762666-1762685 None:intergenic 40.0%
!! ACAACAAGCTTTAGGATCCT+AGG + chr2_1:1762667-1762686 None:intergenic 40.0%
TCTGTCAGAGTTAGAGTATG+GGG + chr2_1:1762776-1762795 None:intergenic 40.0%
CATCTGTCAGAGTTAGAGTA+TGG + chr2_1:1762778-1762797 None:intergenic 40.0%
TGGACTAAACTATAGAGGCA+TGG + chr2_1:1762920-1762939 None:intergenic 40.0%
AGGAAGCAGATTCATTTGCA+AGG - chr2_1:1763009-1763028 Msa0187030:CDS 40.0%
AAGCAGATTCATTTGCAAGG+AGG - chr2_1:1763012-1763031 Msa0187030:CDS 40.0%
AGCAGATTCATTTGCAAGGA+GGG - chr2_1:1763013-1763032 Msa0187030:CDS 40.0%
AATGTACTATAAGAAGCGGC+CGG - chr2_1:1763040-1763059 Msa0187030:CDS 40.0%
TCCACTAACTTCATGAGTTC+CGG + chr2_1:1763062-1763081 None:intergenic 40.0%
AGAGAGATACGATCATGCAA+TGG - chr2_1:1763112-1763131 Msa0187030:CDS 40.0%
GAGAGATACGATCATGCAAT+GGG - chr2_1:1763113-1763132 Msa0187030:CDS 40.0%
AGAGATACGATCATGCAATG+GGG - chr2_1:1763114-1763133 Msa0187030:CDS 40.0%
!! CTGGCATTGTTTTATGTGCA+TGG + chr2_1:1763148-1763167 None:intergenic 40.0%
ATGAGAGTGATTCAGCATCA+GGG + chr2_1:1763232-1763251 None:intergenic 40.0%
ATAACTTCTCCAAACTCTCC+TGG + chr2_1:1763382-1763401 None:intergenic 40.0%
GAATTTCAGCTTCACTTGCT+CGG + chr2_1:1763460-1763479 None:intergenic 40.0%
GATGCAGCTAAAAGCAGATA+AGG - chr2_1:1763505-1763524 Msa0187030:CDS 40.0%
CTAAAAGCAGATAAGGATGC+CGG - chr2_1:1763512-1763531 Msa0187030:CDS 40.0%
GGAGTCAATGTTATCTCAGA+AGG - chr2_1:1763577-1763596 Msa0187030:CDS 40.0%
CTCTGGTAAGTTCTTGCTTT+AGG + chr2_1:1763622-1763641 None:intergenic 40.0%
AAAGCAAGAACTTACCAGAG+TGG - chr2_1:1763622-1763641 Msa0187030:CDS 40.0%
AGCTGGAAGTTGAAACATTG+AGG - chr2_1:1763771-1763790 Msa0187030:CDS 40.0%
! ATATTTTCTCCAGGCAGTGA+TGG + chr2_1:1763847-1763866 None:intergenic 40.0%
TGAGAAAGAGGCAGAAAAAC+TGG - chr2_1:1763928-1763947 Msa0187030:CDS 40.0%
CAGCCTCTAACTGAAGATTT+CGG + chr2_1:1763994-1764013 None:intergenic 40.0%
AGGCTGAAAATTTAGTGCAG+AGG - chr2_1:1764008-1764027 Msa0187030:CDS 40.0%
GGAGCAAAGAAATCTTGCTT+TGG - chr2_1:1764174-1764193 Msa0187030:CDS 40.0%
AACTTAACTTCTCTTCCACC+AGG - chr2_1:1764299-1764318 Msa0187030:CDS 40.0%
!!! CTGCTTTTTTAATGACCTGG+TGG + chr2_1:1764317-1764336 None:intergenic 40.0%
ACAGATGCCGCAAAAGAATT+GGG + chr2_1:1764517-1764536 None:intergenic 40.0%
TACAGATGCCGCAAAAGAAT+TGG + chr2_1:1764518-1764537 None:intergenic 40.0%
GGACTGAATGATGAGTTAGA+TGG - chr2_1:1764667-1764686 Msa0187030:CDS 40.0%
!! GATGAGTTAGATGGATTGAG+AGG - chr2_1:1764676-1764695 Msa0187030:CDS 40.0%
GAAGAACACCACACACTTTA+TGG + chr2_1:1765455-1765474 None:intergenic 40.0%
! TTCAGATTGATTCAGACGGA+GGG - chr2_1:1765472-1765491 Msa0187030:CDS 40.0%
TAAGTCGGAGAAAAAGATCG+TGG - chr2_1:1765665-1765684 Msa0187030:CDS 40.0%
! TTGAACTTCTAGAGGAGAAC+AGG - chr2_1:1765742-1765761 Msa0187030:intron 40.0%
AGGCTGAGATGATAGAATTG+CGG - chr2_1:1765835-1765854 Msa0187030:intron 40.0%
CAGTTGACATTGCATCTTTG+AGG + chr2_1:1765938-1765957 None:intergenic 40.0%
!! AGCTCTAAGCAACCTCAATT+TGG - chr2_1:1765995-1766014 Msa0187030:intron 40.0%
! AGAGCACTTTGTGAACATCT+TGG - chr2_1:1766056-1766075 Msa0187030:intron 40.0%
ACACTCCAAGTTCTTGGTTA+AGG + chr2_1:1766106-1766125 None:intergenic 40.0%
ATCTGAATGAGTCAACTGAG+AGG - chr2_1:1766165-1766184 Msa0187030:intron 40.0%
ACATATTGAGGAGCTGAAGA+TGG - chr2_1:1766259-1766278 Msa0187030:intron 40.0%
AAGTTGAACAACACAGGGTT+AGG - chr2_1:1766429-1766448 Msa0187030:intron 40.0%
AGTTGAACAACACAGGGTTA+GGG - chr2_1:1766430-1766449 Msa0187030:intron 40.0%
! GTTCAAACTTTGGGAGAATG+AGG - chr2_1:1766493-1766512 Msa0187030:intron 40.0%
GAGACTCGATGATGAAAGTT+CGG - chr2_1:1766604-1766623 Msa0187030:intron 40.0%
TGAAAGTTCGGCAAAAAGCT+TGG - chr2_1:1766616-1766635 Msa0187030:intron 40.0%
AGAAATTCTGTGGTAGGCAA+TGG - chr2_1:1766785-1766804 Msa0187030:intron 40.0%
TAGTGATTGAGACCTGTCTT+CGG - chr2_1:1766951-1766970 Msa0187030:intron 40.0%
! AGCAAATCTGAAACTCCATC+TGG + chr2_1:1767022-1767041 None:intergenic 40.0%
! ATTTGCTGACATTGCAGACA+AGG - chr2_1:1767035-1767054 Msa0187030:intron 40.0%
! TGAATATGGAGTCGATTCTG+TGG + chr2_1:1767125-1767144 None:intergenic 40.0%
ATGCTCTCGCTTCAAATACT+TGG + chr2_1:1767308-1767327 None:intergenic 40.0%
! ATTTGAAGCGAGAGCATAGA+AGG - chr2_1:1767311-1767330 Msa0187030:intron 40.0%
TTCCAGAATCATCTGAACGA+TGG + chr2_1:1767420-1767439 None:intergenic 40.0%
CTTCTCTATGTCCAATTCTG+AGG + chr2_1:1767458-1767477 None:intergenic 40.0%
CTCAGAATTGGACATAGAGA+AGG - chr2_1:1767456-1767475 Msa0187030:intron 40.0%
AAACTGAAGATGACAAGAGG+AGG - chr2_1:1767524-1767543 Msa0187030:intron 40.0%
CTTGGAATCTCCCTATCTAA+AGG + chr2_1:1767769-1767788 None:intergenic 40.0%
CATATTGCTGAAATTGGCTG+AGG - chr2_1:1767843-1767862 Msa0187030:intron 40.0%
GCTGAGGAAAACAACAACAA+AGG - chr2_1:1767859-1767878 Msa0187030:intron 40.0%
AGAAGGAAATTGCGTGTTTG+TGG - chr2_1:1767919-1767938 Msa0187030:five_prime_UTR 40.0%
ATTGCGTGTTTGTGGATGTT+CGG - chr2_1:1767927-1767946 Msa0187030:five_prime_UTR 40.0%
CAGCATCTGGTAGAGTTATA+TGG + chr2_1:1768176-1768195 None:intergenic 40.0%
CATATAACTCTACCAGATGC+TGG - chr2_1:1768174-1768193 Msa0187030:five_prime_UTR 40.0%
CTATATCGAAGGTGACTGCA+TGG + chr2_1:1761219-1761238 None:intergenic 45.0%
!!! CAGCACAGGTGGTTTTGATT+CGG + chr2_1:1761498-1761517 None:intergenic 45.0%
TCTGGACTCAGATTCTGACA+AGG + chr2_1:1761549-1761568 None:intergenic 45.0%
CCACCAAGAATATAAGCGTC+TGG + chr2_1:1761567-1761586 None:intergenic 45.0%
CCAGACGCTTATATTCTTGG+TGG - chr2_1:1761564-1761583 Msa0187030:CDS 45.0%
GACGCTTATATTCTTGGTGG+TGG - chr2_1:1761567-1761586 Msa0187030:CDS 45.0%
TAAGGTAGCTTCGGCTAGAA+TGG - chr2_1:1761913-1761932 Msa0187030:CDS 45.0%
GGATGTATGGACCTCCATTA+TGG + chr2_1:1761950-1761969 None:intergenic 45.0%
GGAACTCATGAAGTTAGTGG+AGG - chr2_1:1763061-1763080 Msa0187030:CDS 45.0%
GAGATACGATCATGCAATGG+GGG - chr2_1:1763115-1763134 Msa0187030:CDS 45.0%
GATTCACCATGCGGTTCTTT+AGG - chr2_1:1763206-1763225 Msa0187030:CDS 45.0%
GATGAGAGTGATTCAGCATC+AGG + chr2_1:1763233-1763252 None:intergenic 45.0%
!! ATCAGACTGGATTTTGGCCA+GGG + chr2_1:1763336-1763355 None:intergenic 45.0%
!! TATCAGACTGGATTTTGGCC+AGG + chr2_1:1763337-1763356 None:intergenic 45.0%
GGCCAAAATCCAGTCTGATA+AGG - chr2_1:1763337-1763356 Msa0187030:CDS 45.0%
!! AGAGAGCATCCTTATCAGAC+TGG + chr2_1:1763349-1763368 None:intergenic 45.0%
TGCTCTCTTTCTTCAGTACC+AGG - chr2_1:1763361-1763380 Msa0187030:CDS 45.0%
TCTTCAGTACCAGGAGAGTT+TGG - chr2_1:1763370-1763389 Msa0187030:CDS 45.0%
ATAAGGATGCCGGTGAAGTT+CGG - chr2_1:1763522-1763541 Msa0187030:CDS 45.0%
CTGATTGTACCGAACTTCAC+CGG + chr2_1:1763534-1763553 None:intergenic 45.0%
TACCAGAGTGGTAGTTCAGA+AGG - chr2_1:1763634-1763653 Msa0187030:CDS 45.0%
ATCCTTCTGAACTACCACTC+TGG + chr2_1:1763639-1763658 None:intergenic 45.0%
AGACTGCAAACTCTGATGCA+TGG - chr2_1:1764079-1764098 Msa0187030:CDS 45.0%
GACTGCAAACTCTGATGCAT+GGG - chr2_1:1764080-1764099 Msa0187030:CDS 45.0%
ACTGCAAACTCTGATGCATG+GGG - chr2_1:1764081-1764100 Msa0187030:CDS 45.0%
ATATGGGCTTCGTCTGTTGA+AGG - chr2_1:1764204-1764223 Msa0187030:CDS 45.0%
GGAAGAGATGCAAGAGATTG+TGG - chr2_1:1764255-1764274 Msa0187030:CDS 45.0%
! CAAAAAGGAGCACAGTGAGA+AGG - chr2_1:1764579-1764598 Msa0187030:CDS 45.0%
TGGATTGAGAGGAACAGTGA+AGG - chr2_1:1764687-1764706 Msa0187030:CDS 45.0%
GAATCTAGTCCACGTACTAC+AGG - chr2_1:1765170-1765189 Msa0187030:CDS 45.0%
ACGTACTACAGGAAGAACAG+CGG - chr2_1:1765181-1765200 Msa0187030:CDS 45.0%
! CTTCAGATTGATTCAGACGG+AGG - chr2_1:1765471-1765490 Msa0187030:CDS 45.0%
GTAGAGAACTCTGTCCTCAT+AGG - chr2_1:1765606-1765625 Msa0187030:CDS 45.0%
ACTTCAGCAGCATCAATCTG+AGG - chr2_1:1765632-1765651 Msa0187030:CDS 45.0%
CTTCAGCAGCATCAATCTGA+GGG - chr2_1:1765633-1765652 Msa0187030:CDS 45.0%
GAACAGTGCAATGTTCCATG+AGG - chr2_1:1765968-1765987 Msa0187030:intron 45.0%
TGCTTAGAGCTAGTACCTCA+TGG + chr2_1:1765986-1766005 None:intergenic 45.0%
! ACCAAGAACTTGGAGTGTTC+AGG - chr2_1:1766108-1766127 Msa0187030:intron 45.0%
TCCTGAACACTCCAAGTTCT+TGG + chr2_1:1766112-1766131 None:intergenic 45.0%
GAATGAGTCAACTGAGAGGA+TGG - chr2_1:1766169-1766188 Msa0187030:intron 45.0%
AGCTGCTGGAAATGGAGAAA+AGG - chr2_1:1766198-1766217 Msa0187030:intron 45.0%
CTTCAGCTCCTCAATATGTC+TGG + chr2_1:1766258-1766277 None:intergenic 45.0%
AGCAAGGTTACTGAGCTTAC+TGG - chr2_1:1766572-1766591 Msa0187030:intron 45.0%
AGGTCTCAATCACTACATCC+TGG + chr2_1:1766946-1766965 None:intergenic 45.0%
ATGGCTATGTTTCCGAAGAC+AGG + chr2_1:1766966-1766985 None:intergenic 45.0%
CATTCCACTTGATCGCAATG+TGG - chr2_1:1767270-1767289 Msa0187030:intron 45.0%
TCATCCACATTGCGATCAAG+TGG + chr2_1:1767277-1767296 None:intergenic 45.0%
ATCATAGCATGGTCCACTGT+TGG + chr2_1:1767394-1767413 None:intergenic 45.0%
AACGATGGCAGATCATAGCA+TGG + chr2_1:1767405-1767424 None:intergenic 45.0%
TGCCATCGTTCAGATGATTC+TGG - chr2_1:1767415-1767434 Msa0187030:five_prime_UTR 45.0%
AGATGACAAGAGGAGGATCT+TGG - chr2_1:1767531-1767550 Msa0187030:intron 45.0%
ACGAAGCTTCGCCTTTAGAT+AGG - chr2_1:1767755-1767774 Msa0187030:intron 45.0%
CGAAGCTTCGCCTTTAGATA+GGG - chr2_1:1767756-1767775 Msa0187030:intron 45.0%
GATAGGGAGATTCCAAGAAG+AGG - chr2_1:1767772-1767791 Msa0187030:intron 45.0%
TTGCGTGTTTGTGGATGTTC+GGG - chr2_1:1767928-1767947 Msa0187030:five_prime_UTR 45.0%
GTACACTACAAACCAGCATC+TGG + chr2_1:1768189-1768208 None:intergenic 45.0%
!! AAATTTACTAAATTATATTA+GGG + chr2_1:1762813-1762832 None:intergenic 5.0%
AGGTGACTGCATGGAAGAGT+TGG + chr2_1:1761210-1761229 None:intergenic 50.0%
GAATGCAACAACAGCACAGG+TGG + chr2_1:1761509-1761528 None:intergenic 50.0%
GCAGAATGCAACAACAGCAC+AGG + chr2_1:1761512-1761531 None:intergenic 50.0%
TGGAGGTCAACTATGGTGAG+TGG - chr2_1:1762332-1762351 Msa0187030:CDS 50.0%
GCCGGAACTCATGAAGTTAG+TGG - chr2_1:1763058-1763077 Msa0187030:CDS 50.0%
CGTATCTCTCTGCTAACGCA+CGG + chr2_1:1763103-1763122 None:intergenic 50.0%
! GCTGAGTTGGGAAATGCTTC+TGG + chr2_1:1763167-1763186 None:intergenic 50.0%
TCAAACCTTAAGGGAAGCCC+TGG - chr2_1:1763316-1763335 Msa0187030:CDS 50.0%
CTTCACTTGCTCGGTCATCA+AGG + chr2_1:1763451-1763470 None:intergenic 50.0%
ACCTTGCTGAGGAGAATTCC+AGG - chr2_1:1763720-1763739 Msa0187030:CDS 50.0%
TCCTGGAATTCTCCTCAGCA+AGG + chr2_1:1763724-1763743 None:intergenic 50.0%
TGTCCTTTACCATCACTGCC+TGG - chr2_1:1763835-1763854 Msa0187030:CDS 50.0%
TCTCCAGGCAGTGATGGTAA+AGG + chr2_1:1763841-1763860 None:intergenic 50.0%
GCTTCGTCTGTTGAAGGACT+TGG - chr2_1:1764210-1764229 Msa0187030:CDS 50.0%
! AGAGAGGGACTTTTCCAGCA+AGG + chr2_1:1764836-1764855 None:intergenic 50.0%
TGAAGCGCGACTGGCAAATT+TGG - chr2_1:1765146-1765165 Msa0187030:CDS 50.0%
GCTGTTCTTCCTGTAGTACG+TGG + chr2_1:1765182-1765201 None:intergenic 50.0%
ACTACAGGAAGAACAGCGGT+TGG - chr2_1:1765185-1765204 Msa0187030:CDS 50.0%
CTACAGGAAGAACAGCGGTT+GGG - chr2_1:1765186-1765205 Msa0187030:CDS 50.0%
TACAGGAAGAACAGCGGTTG+GGG - chr2_1:1765187-1765206 Msa0187030:CDS 50.0%
GCTGCTGAAGTGAACCTATG+AGG + chr2_1:1765623-1765642 None:intergenic 50.0%
TAGAGGAGAACAGGCAACTG+AGG - chr2_1:1765751-1765770 Msa0187030:intron 50.0%
GGACAAAGAGCTGCTGGAAA+TGG - chr2_1:1766190-1766209 Msa0187030:intron 50.0%
GCTGGAAATGGAGAAAAGGC+TGG - chr2_1:1766202-1766221 Msa0187030:intron 50.0%
GGAAATGGAGAAAAGGCTGG+AGG - chr2_1:1766205-1766224 Msa0187030:intron 50.0%
! ACTTTGGGAGAATGAGGCTG+CGG - chr2_1:1766499-1766518 Msa0187030:intron 50.0%
TAGAGCACATTTCCCGCCTT+TGG - chr2_1:1766756-1766775 Msa0187030:intron 50.0%
ACCATTATCTGCGCCAACAG+TGG - chr2_1:1767378-1767397 Msa0187030:five_prime_UTR 50.0%
TCCACTGTTGGCGCAGATAA+TGG + chr2_1:1767382-1767401 None:intergenic 50.0%
ACAAGAGGAGGATCTTGGAG+AGG - chr2_1:1767536-1767555 Msa0187030:intron 50.0%
GATCTTGGAGAGGCTTTCCT+CGG - chr2_1:1767546-1767565 Msa0187030:intron 50.0%
AGCTAACTTCTGACCATCCG+AGG + chr2_1:1767566-1767585 None:intergenic 50.0%
TGCGTGTTTGTGGATGTTCG+GGG - chr2_1:1767929-1767948 Msa0187030:five_prime_UTR 50.0%
TTCGGGGCCATCAACTAATG+AGG - chr2_1:1767945-1767964 Msa0187030:five_prime_UTR 50.0%
CTGCTAACGCACGGTATGCT+CGG + chr2_1:1763094-1763113 None:intergenic 55.0%
TCAGGGCCTAAAGAACCGCA+TGG + chr2_1:1763215-1763234 None:intergenic 55.0%
TTTGGCCAGGGCTTCCCTTA+AGG + chr2_1:1763324-1763343 None:intergenic 55.0%
ACACTCAAGTGAAGCGCGAC+TGG - chr2_1:1765137-1765156 Msa0187030:CDS 55.0%
GTCTACTTTGGCAGCTCTGC+AGG - chr2_1:1765815-1765834 Msa0187030:intron 55.0%
GAGGATGGACAAAGAGCTGC+TGG - chr2_1:1766184-1766203 Msa0187030:intron 55.0%
! CAGGGTTAGGGAAGAAGCAC+TGG - chr2_1:1766442-1766461 Msa0187030:intron 55.0%
GGTAGGCAATGGAGCGCAAA+AGG - chr2_1:1766796-1766815 Msa0187030:intron 55.0%
TTGGAGAGGCTTTCCTCGGA+TGG - chr2_1:1767550-1767569 Msa0187030:intron 55.0%
GGAAGAACAGCGGTTGGGGA+AGG - chr2_1:1765191-1765210 Msa0187030:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 1760436 1768246 1760436 ID=Msa0187030;Name=Msa0187030
chr2_1 mRNA 1760436 1768246 1760436 ID=Msa0187030-mRNA-1;Parent=Msa0187030;Name=Msa0187030-mRNA-1;_AED=0.12;_eAED=0.12;_QI=557|1|1|1|0.5|0.4|5|274|1659
chr2_1 exon 1760436 1761735 1760436 ID=Msa0187030-mRNA-1:exon:770;Parent=Msa0187030-mRNA-1
chr2_1 exon 1761865 1765715 1761865 ID=Msa0187030-mRNA-1:exon:769;Parent=Msa0187030-mRNA-1
chr2_1 exon 1767041 1767253 1767041 ID=Msa0187030-mRNA-1:exon:768;Parent=Msa0187030-mRNA-1
chr2_1 exon 1767369 1767458 1767369 ID=Msa0187030-mRNA-1:exon:767;Parent=Msa0187030-mRNA-1
chr2_1 exon 1767890 1768246 1767890 ID=Msa0187030-mRNA-1:exon:766;Parent=Msa0187030-mRNA-1
chr2_1 five_prime_UTR 1767890 1768246 1767890 ID=Msa0187030-mRNA-1:five_prime_utr;Parent=Msa0187030-mRNA-1
chr2_1 five_prime_UTR 1767369 1767458 1767369 ID=Msa0187030-mRNA-1:five_prime_utr;Parent=Msa0187030-mRNA-1
chr2_1 five_prime_UTR 1767144 1767253 1767144 ID=Msa0187030-mRNA-1:five_prime_utr;Parent=Msa0187030-mRNA-1
chr2_1 CDS 1767041 1767143 1767041 ID=Msa0187030-mRNA-1:cds;Parent=Msa0187030-mRNA-1
chr2_1 CDS 1761865 1765715 1761865 ID=Msa0187030-mRNA-1:cds;Parent=Msa0187030-mRNA-1
chr2_1 CDS 1760710 1761735 1760710 ID=Msa0187030-mRNA-1:cds;Parent=Msa0187030-mRNA-1
chr2_1 three_prime_UTR 1760436 1760709 1760436 ID=Msa0187030-mRNA-1:three_prime_utr;Parent=Msa0187030-mRNA-1
Gene Sequence

>Msa0187030

ATGGCTACCTTGTCAGAATCTGAGTCCAGACGCTTATATTCTTGGTGGTGGGATAGCCACAATAGTCCAAAGAATTCAAAATGGCTTCTGGAAAATCTTACAGATATAGACACTAAAGTCAAATCAATGATCAAGCTCATTGAAGAGGAAGCAGATTCATTTGCAAGGAGGGCAGAAATGTACTATAAGAAGCGGCCGGAACTCATGAAGTTAGTGGAGGAGTTCTACCGAGCATACCGTGCGTTAGCAGAGAGATACGATCATGCAATGGGGGAACTACGCCATGCACATAAAACAATGCCAGAAGCATTTCCCAACTCAGCATATTACATTCTAAATGATGATTCACCATGCGGTTCTTTAGGCCCTGATGCTGAATCACTCTCATCAGCCCGACCAATTCATCGATCAAAAAAGAATGAAAGGAGTTCAGAAAAATCTAATGGTGAAGTTCAAACCTTAAGGGAAGCCCTGGCCAAAATCCAGTCTGATAAGGATGCTCTCTTTCTTCAGTACCAGGAGAGTTTGGAGAAGTTATCCAAAATGGAAACAGATCTTAACAAGGCACAAAATAATGCTAGAGGCCTTGATGACCGAGCAAGTGAAGCTGAAATTCAAGTCGTAATATTGAAGGAATCTCTGATGCAGCTAAAAGCAGATAAGGATGCCGGTGAAGTTCGGTACAATCAGTGTCTAGAAACTATAGCTAGACTGGAGTCAATGTTATCTCAGAAGGATAACATTGAAGCCAAAAACCTAAAGCAAGAACTTACCAGAGTGGTAGTTCAGAAGGATACTATTCTTCTTCAATATAAGCAATGTCTTGAAAAGATTCCAATGTTGGAGAACAAAATAAACCTTGCTGAGGAGAATTCCAGGATGCTTAATGATCAAATTGAAAGAACAGAGCTGGAAGTTGAAACATTGAGGAAAAATCTTTCTGAGGTGAATGAAGAGAGAGATTCTCTTTCTGTCCTTTACCATCACTGCCTGGAGAAAATATCTAAAATGGAGAATGAAATTCTGCATGTGCAAGAAAATGCCGAACAACTAAAAAACAAAATTGAGAAAGAGGCAGAAAAACTGGAGATTTCTGAAAAACATCGTGGTATGTTGGAGAAATCAAACCGAAATCTTCAGTTAGAGGCTGAAAATTTAGTGCAGAGGATAGCATCGAAAGATCATGAGCTTCTAGAGAAGCATACTGAGATAGAGAGACTGCAAACTCTGATGCATGGGGAGCATTCTAACTTTATTCAAATTGAATCAGCTCTACAGGCTCTGCAGAAGTTGTACTCTCAATCACAAAAGGAGCAAAGAAATCTTGCTTTGGAGCTTAAATATGGGCTTCGTCTGTTGAAGGACTTGGAACTTTCCAAACAAGATTTTAAGGAAGAGATGCAAGAGATTGTGGAAGAAAACAAGACTCTTCATGAACTTAACTTCTCTTCCACCAGGTCATTAAAAAAGCAGCAAATGGAAATCTCTAAGTTGAAGGAGATCAAAGAGAAACTTGAACGAGAGTTTCACATAAGCACTGAAGAAAGCAATGTCCTCAAGCATGAAACTCATCAAATAAAGGATGATATACAGTACTTGAATGAGAGATATCAGTCTATGCTTGAACAACTACAGAGTTTAGGTCTGAATCCCAATTCTTTTGCGGCATCTGTAAAAGATCTACAAAATGAGAACTTCTTGCTAAAAGAAGACTGCAAAAAGGAGCACAGTGAGAAGGAAGCTCTTCGTGAAAAATCAAAAGAAGTTTTGATGGAAAATGCCTGTATGGAATTTTCTCTGTTAGGACTGAATGATGAGTTAGATGGATTGAGAGGAACAGTGAAGGAAATTCAACAGTTCTGCCAAGTTCTCCAAGAAGAAAAATCCATTCTTGCTGATGAGAAATCAACTCTGCTTTCACAGCTGCAAATTATCACTGAAAGTATGCAGAAGATATTGGAGAATAATACCTTGCTGGAAAAGTCCCTCTCTGATGCTAAAATTGAGTTTGAAGGTTTGAGAATTAAATCAGGTGATTTGGAAGACTGCTGCAAATTGCTAACTGATGAGAAAAACAATCTTCAAAATGAAAGAAGCATTCTAATATCTCAATTGGAGATTGTTGAAGCAAAACTAAGTAACCTTGAAAAGAAGGTTACAAAGTTGGAAGAAAAATATGCTGATGTGGAGAAAGACAAAGAAAGTGCAGTCAATCAAGTAGAAGAACTTTTTGCTTCAATTTTGGCACAAAAAAAGAATCATTCTAATCACAAACACTCAAGTGAAGCGCGACTGGCAAATTTGGAGAATCTAGTCCACGTACTACAGGAAGAACAGCGGTTGGGGAAGGTAGAATTCGAACAAGAACTTGACAGAGTTGTAAATGCTCAAGTCGAGATGTTCATTTTGCAAAATTGTATTGAAGAGTTGGAGCTGAAGAACTTTGTCTTGTTAACTGAATGTGAAAAACTCGTTGAGGCATCAAAATTTTCTGATAAAGTAATTTCGGAGCTGGAGAGCGAAAATCTTATGCAACTTATTGAAGAAGAGTTTTTGTTACATAGAATCAGAAAGTTTAAAATGGATATCCATAAAGTGTGTGGTGTTCTTCAGATTGATTCAGACGGAGGGTGTGACAATGAAATCAAGAAAGAAGAAATTCCAATATCGCGTATATTGGACAAAATTGAGAGCTTGGAAAGTTCTCTAGTGAAAAGTCAAGAGGAGAATCAGCAGCTGCGTGTAGAGAACTCTGTCCTCATAGGTTCACTTCAGCAGCATCAATCTGAGGGAGAAAAACTTAAGTCGGAGAAAAAGATCGTGGAGCAAGAGTTTGAGAACATGAGAGAGCAGAACGTAATCTTGCACAAAGATAAAGTTGAACTTCTAGAGGAGAACAGGCAACTGAGGATTGAAGTAGTAAATGGACTGGAAAAAGAAAATAGATCAAAGTCTACTTTGGCAGCTCTGCAGGCTGAGATGATAGAATTGCGGCAAACAAATCAAGTGTTTCAAGAAGAAAATGGTAAGATGCTTGACGAGAAAAAATCATTGTTTAGGAATGTTTCGGACCTCAAAGATGCAATGTCAACTGCTGAAGATGAGAACAGTGCAATGTTCCATGAGGTACTAGCTCTAAGCAACCTCAATTTGGTTTATGAGAGCTTTCTCACTGAGAACGTCGTTGAAAAAAGAGCACTTTGTGAACATCTTGGCAATCTTAGCCATTTGAACAATGACCTTAACCAAGAACTTGGAGTGTTCAGGAAGAATTTTGAGGTGAAAGAAGCAGAAAATGTTTATCTGAATGAGTCAACTGAGAGGATGGACAAAGAGCTGCTGGAAATGGAGAAAAGGCTGGAGGCTGCAGAGACGTCAAATGCAGAGTTTTCCAGACATATTGAGGAGCTGAAGATGGAACAAGAAGAATCAACAAAGATCAAAGAAAATCTAGACAGACAGATTCTTGAACAATCGGAAAATTGCATGAATCACAAAAAAGAAATTGAACACCTTAATGAAGCAAATGAAACATTACAGTCTGATATGAAAACACTGCTTCATGAAGTTGAACAACACAGGGTTAGGGAAGAAGCACTGGATTTAGAGTTGTTGAATAAAGAAAATGAGTTCAAACTTTGGGAGAATGAGGCTGCGGCATTTTATCATGATCTTCAGATGTCATCTATTTGTTTAGCACTGTTAGAAAGCAAGGTTACTGAGCTTACTGGAGTTTGCAAGAGACTCGATGATGAAAGTTCGGCAAAAAGCTTGGAGAATGAACACATGAGAGAAATAATCAGTTTACTGGAAAGTGAAATTGGAGAACTGAAGGGACAGTTGTCAGCATATGTTCCCATCGTTTCTTCTTTAAAAGAGGATTTTAATTCTCTAGAGCACATTTCCCGCCTTTGGACTAAAAGAAATTCTGTGGTAGGCAATGGAGCGCAAAAGGATGTAGTGATTGAGACCTGTCTTCGGAAACATAGCCATCAAAGTGCAAGAGAAAATGAAAGTGTGTTAATACCAGATGGAGTTTCAGATTTGCTGACATTGCAGACAAGGATCAGAGCAGTTGAAAAGATTATGATGGAAGAACTTAAAAGACGTGTCAAGCAGAAAAGTCTGACCACAGAATCGACTCCATATTCAAGTTTGGAAATTGCCACATATCCAAAAGTTGACAATAGAAAAAAGGAGATTGAACTTGTGGAAGAGAATGTATTTGACCGCAATTCATGGAGAAAAAAACCTAAAATAAGGTTATTGATGAAAGACATTCCACTTGATCGCAATGTGGATGATCAAAACTCCAAGTATTTGAAGCGAGAGCATAGAAGGACTAATGATCATGTGTTAGAGTTGTGCGAAAATAATGAGCATGAACCATTATCTGCGCCAACAGTGGACCATGCTATGATCTGCCATCGTTCAGATGATTCTGGAAGATATCTAAATTACTCCTCAGAATTGGACATAGAGAAGGAATTGGGCGTTGACAAGCTCGAGTTGTCGAAAAGTGTAAAAGAGAAAACTGAAGATGACAAGAGGAGGATCTTGGAGAGGCTTTCCTCGGATGGTCAGAAGTTAGCTATTCTTAAAATGGCTTTACAAGACTTGAAAAAGAAAACGGAAACAAAGAAGAAAAGCAAGCAAGGAAATGACATCGAATATGAAACTGTTAAAAGACATATAGAAGAAGTTGAGGAAGCTGTGATGCAACAAGTAAGTATAAATGATCAAATGGCAAAGAATGTTGAAGACGAAGCTTCGCCTTTAGATAGGGAGATTCCAAGAAGAGGTTCTGAACAAATAGGAAAGTTGCAGTTTGAGGTGCAGAACATCCAATACATATTGCTGAAATTGGCTGAGGAAAACAACAACAAAGGGAAAAATAGAATATCTCGAAAAACAGGTATATTGTTGAGAAGGAAATTGCGTGTTTGTGGATGTTCGGGGCCATCAACTAATGAGGATTAA
Protein sequence

>Msa0187030

MATLSESESRRLYSWWWDSHNSPKNSKWLLENLTDIDTKVKSMIKLIEEEADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHAMGELRHAHKTMPEAFPNSAYYILNDDSPCGSLGPDAESLSSARPIHRSKKNERSSEKSNGEVQTLREALAKIQSDKDALFLQYQESLEKLSKMETDLNKAQNNARGLDDRASEAEIQVVILKESLMQLKADKDAGEVRYNQCLETIARLESMLSQKDNIEAKNLKQELTRVVVQKDTILLQYKQCLEKIPMLENKINLAEENSRMLNDQIERTELEVETLRKNLSEVNEERDSLSVLYHHCLEKISKMENEILHVQENAEQLKNKIEKEAEKLEISEKHRGMLEKSNRNLQLEAENLVQRIASKDHELLEKHTEIERLQTLMHGEHSNFIQIESALQALQKLYSQSQKEQRNLALELKYGLRLLKDLELSKQDFKEEMQEIVEENKTLHELNFSSTRSLKKQQMEISKLKEIKEKLEREFHISTEESNVLKHETHQIKDDIQYLNERYQSMLEQLQSLGLNPNSFAASVKDLQNENFLLKEDCKKEHSEKEALREKSKEVLMENACMEFSLLGLNDELDGLRGTVKEIQQFCQVLQEEKSILADEKSTLLSQLQIITESMQKILENNTLLEKSLSDAKIEFEGLRIKSGDLEDCCKLLTDEKNNLQNERSILISQLEIVEAKLSNLEKKVTKLEEKYADVEKDKESAVNQVEELFASILAQKKNHSNHKHSSEARLANLENLVHVLQEEQRLGKVEFEQELDRVVNAQVEMFILQNCIEELELKNFVLLTECEKLVEASKFSDKVISELESENLMQLIEEEFLLHRIRKFKMDIHKVCGVLQIDSDGGCDNEIKKEEIPISRILDKIESLESSLVKSQEENQQLRVENSVLIGSLQQHQSEGEKLKSEKKIVEQEFENMREQNVILHKDKVELLEENRQLRIEVVNGLEKENRSKSTLAALQAEMIELRQTNQVFQEENGKMLDEKKSLFRNVSDLKDAMSTAEDENSAMFHEVLALSNLNLVYESFLTENVVEKRALCEHLGNLSHLNNDLNQELGVFRKNFEVKEAENVYLNESTERMDKELLEMEKRLEAAETSNAEFSRHIEELKMEQEESTKIKENLDRQILEQSENCMNHKKEIEHLNEANETLQSDMKTLLHEVEQHRVREEALDLELLNKENEFKLWENEAAAFYHDLQMSSICLALLESKVTELTGVCKRLDDESSAKSLENEHMREIISLLESEIGELKGQLSAYVPIVSSLKEDFNSLEHISRLWTKRNSVVGNGAQKDVVIETCLRKHSHQSARENESVLIPDGVSDLLTLQTRIRAVEKIMMEELKRRVKQKSLTTESTPYSSLEIATYPKVDNRKKEIELVEENVFDRNSWRKKPKIRLLMKDIPLDRNVDDQNSKYLKREHRRTNDHVLELCENNEHEPLSAPTVDHAMICHRSDDSGRYLNYSSELDIEKELGVDKLELSKSVKEKTEDDKRRILERLSSDGQKLAILKMALQDLKKKTETKKKSKQGNDIEYETVKRHIEEVEEAVMQQVSINDQMAKNVEDEASPLDREIPRRGSEQIGKLQFEVQNIQYILLKLAEENNNKGKNRISRKTGILLRRKLRVCGCSGPSTNED*