Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942300 | XP_024641967.1 | 95.172 | 580 | 21 | 1 | 1 | 573 | 18 | 597 | 0.0 | 1118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942300 | sp|Q8GUM4|Y3739_ARATH | 56.485 | 586 | 229 | 10 | 1 | 566 | 1 | 580 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942300 | A0A396HCZ0 | 95.172 | 580 | 21 | 1 | 1 | 573 | 18 | 597 | 0.0 | 1118 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021980 | Msa0942300 | 0.824544 | 7.619326e-54 | -8.615850e-47 |
| Msa0643020 | Msa0942300 | -0.824859 | 6.423341e-54 | -8.615850e-47 |
| Msa0697600 | Msa0942300 | 0.813550 | 2.418330e-51 | -8.615850e-47 |
| Msa0796460 | Msa0942300 | 0.802227 | 6.200676e-49 | -8.615850e-47 |
| Msa0188500 | Msa0942300 | 0.814923 | 1.203163e-51 | -8.615850e-47 |
| Msa0200870 | Msa0942300 | 0.815884 | 7.353855e-52 | -8.615850e-47 |
| Msa0225880 | Msa0942300 | 0.830888 | 2.278431e-55 | -8.615850e-47 |
| Msa0454940 | Msa0942300 | 0.824663 | 7.144159e-54 | -8.615850e-47 |
| Msa0243470 | Msa0942300 | 0.806623 | 7.520266e-50 | -8.615850e-47 |
| Msa0260470 | Msa0942300 | 0.830005 | 3.745259e-55 | -8.615850e-47 |
| Msa0304110 | Msa0942300 | 0.819768 | 9.764241e-53 | -8.615850e-47 |
| Msa0341190 | Msa0942300 | 0.816595 | 5.098732e-52 | -8.615850e-47 |
| Msa0362430 | Msa0942300 | 0.820642 | 6.158195e-53 | -8.615850e-47 |
| Msa0502910 | Msa0942300 | 0.805860 | 1.088742e-49 | -8.615850e-47 |
| Msa0560370 | Msa0942300 | 0.800645 | 1.307962e-48 | -8.615850e-47 |
| Msa0601920 | Msa0942300 | -0.809391 | 1.936755e-50 | -8.615850e-47 |
| Msa0871310 | Msa0942300 | 0.908039 | 2.641376e-81 | -8.615850e-47 |
| Msa0942300 | Msa0979270 | 0.865674 | 4.975726e-65 | -8.615850e-47 |
| Msa0942300 | Msa0999590 | 0.848145 | 7.383409e-60 | -8.615850e-47 |
| Msa0942300 | Msa1038110 | 0.836946 | 6.944538e-57 | -8.615850e-47 |
| Msa0942300 | Msa1080790 | 0.836474 | 9.161033e-57 | -8.615850e-47 |
| Msa0942300 | Msa1118930 | 0.838359 | 3.013507e-57 | -8.615850e-47 |
| Msa0942300 | Msa1188820 | 0.802966 | 4.366111e-49 | -8.615850e-47 |
| Msa0942300 | Msa1259010 | 0.807708 | 4.429339e-50 | -8.615850e-47 |
| Msa0942300 | Msa1353280 | 0.841230 | 5.390445e-58 | -8.615850e-47 |
| Msa0942300 | Msa1370630 | 0.863943 | 1.734621e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942300 | MtrunA17_Chr6g0458321 | 95.172 | 580 | 21 | 1 | 1 | 573 | 18 | 597 | 0.0 | 1118 |
| Msa0942300 | MtrunA17_Chr7g0226361 | 62.718 | 574 | 203 | 4 | 1 | 564 | 1 | 573 | 0.0 | 726 |
| Msa0942300 | MtrunA17_Chr3g0120631 | 45.588 | 544 | 273 | 5 | 1 | 525 | 1 | 540 | 1.03e-155 | 457 |
| Msa0942300 | MtrunA17_Chr8g0374991 | 40.221 | 542 | 300 | 8 | 21 | 540 | 21 | 560 | 3.95e-135 | 406 |
| Msa0942300 | MtrunA17_Chr3g0120571 | 52.090 | 311 | 148 | 1 | 1 | 311 | 1 | 310 | 1.37e-104 | 318 |
| Msa0942300 | MtrunA17_Chr3g0120581 | 42.771 | 166 | 95 | 0 | 357 | 522 | 18 | 183 | 1.27e-34 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942300 | AT5G40640.1 | 57.759 | 580 | 223 | 9 | 1 | 563 | 1 | 575 | 0.0 | 648 |
| Msa0942300 | AT3G27390.2 | 56.485 | 586 | 229 | 10 | 1 | 566 | 1 | 580 | 0.0 | 647 |
| Msa0942300 | AT3G27390.1 | 56.485 | 586 | 229 | 10 | 1 | 566 | 1 | 580 | 0.0 | 647 |
| Msa0942300 | AT4G12680.1 | 46.939 | 539 | 266 | 9 | 1 | 522 | 1 | 536 | 6.01e-143 | 426 |
| Msa0942300 | AT4G37030.1 | 38.246 | 536 | 303 | 9 | 21 | 531 | 21 | 553 | 2.50e-130 | 393 |
Find 114 sgRNAs with CRISPR-Local
Find 620 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTGTCGTCGGCGCATTTC+TGG | 0.099674 | 6_3:+16932714 | Msa0942300:CDS |
| GTCATGATTAAGCATATTAA+AGG | 0.224944 | 6_3:-16931526 | None:intergenic |
| CAGGAGTCCTCTTTCTTGTT+TGG | 0.241603 | 6_3:+16932912 | Msa0942300:intron |
| CAGGCCTTGCTATCCTTCTA+TGG | 0.261167 | 6_3:+16932686 | Msa0942300:CDS |
| GAGTTCAAGTTAAATCATTC+AGG | 0.270749 | 6_3:+16940011 | Msa0942300:three_prime_UTR |
| GGCTGGAGTTGTTGCCTATC+AGG | 0.273543 | 6_3:+16932771 | Msa0942300:CDS |
| TGATGTTGCCTAGAATAAAA+AGG | 0.288251 | 6_3:-16929551 | None:intergenic |
| TAATGATCAAAAGTGGATTA+AGG | 0.298395 | 6_3:-16933881 | None:intergenic |
| CAGCTATCATACTTGGTCTT+TGG | 0.306187 | 6_3:+16931560 | Msa0942300:CDS |
| GGAATTGTTGGAAGTATTGT+AGG | 0.319992 | 6_3:+16931789 | Msa0942300:CDS |
| CCGGAGAATATTACGAAATC+AGG | 0.336687 | 6_3:+16932390 | Msa0942300:CDS |
| CCATACTTATTTCTCTGTAA+TGG | 0.352662 | 6_3:+16932340 | Msa0942300:CDS |
| TGCAGGCTGCATTATATTCC+TGG | 0.357221 | 6_3:+16932499 | Msa0942300:intron |
| TGGTCGCGAAGGCCCTTTCT+TGG | 0.363819 | 6_3:+16932642 | Msa0942300:CDS |
| ATCTTTCTCGGTGCTCGGGC+TGG | 0.380067 | 6_3:+16932754 | Msa0942300:CDS |
| ATATGCTTAATCATGACAAT+TGG | 0.382629 | 6_3:+16931532 | Msa0942300:CDS |
| CGTTTGTTTCGTGACCTCAT+TGG | 0.382811 | 6_3:+16932622 | Msa0942300:CDS |
| TCTTCAATGGTGATCCTGAT+AGG | 0.383323 | 6_3:+16933967 | Msa0942300:CDS |
| CCTCTTTCTTGTTTGGCCTT+CGG | 0.384001 | 6_3:+16932919 | Msa0942300:CDS |
| CAACCTTTGAAAAGCATGTA+TGG | 0.388635 | 6_3:-16932595 | None:intergenic |
| TGCAAATTAGTTCTCTTCAA+TGG | 0.392174 | 6_3:+16933954 | Msa0942300:CDS |
| CTCTATTAAAGCCGATTCCT+CGG | 0.399831 | 6_3:+16933674 | Msa0942300:CDS |
| CGACAGCCAGTGGCCATAGA+AGG | 0.405277 | 6_3:-16932699 | None:intergenic |
| ATTGTAGGTGGTGCAGCTTA+TGG | 0.409722 | 6_3:+16931804 | Msa0942300:CDS |
| TTATTTCTGTGAAGGCTTCA+AGG | 0.409868 | 6_3:+16934250 | Msa0942300:intron |
| GACTACAGATGTAAACAATT+AGG | 0.416259 | 6_3:+16931699 | Msa0942300:intron |
| AACTCGACGCATTGGCTAGA+AGG | 0.416951 | 6_3:+16934042 | Msa0942300:CDS |
| TACTTCATAAGTGGTGCATC+AGG | 0.422390 | 6_3:+16940041 | Msa0942300:three_prime_UTR |
| CCATTACAGAGAAATAAGTA+TGG | 0.425303 | 6_3:-16932340 | None:intergenic |
| GCTTCAAAAGTAGCAAATAA+TGG | 0.426557 | 6_3:-16931837 | None:intergenic |
| GCTGTTGTAGCAGCAATTCT+CGG | 0.428501 | 6_3:+16932523 | Msa0942300:CDS |
| GAGAGTAAAGTCATTAGTAT+TGG | 0.428912 | 6_3:+16933615 | Msa0942300:CDS |
| TAGTATCTTTGTAGACATCT+TGG | 0.435372 | 6_3:+16929450 | Msa0942300:five_prime_UTR |
| GACATACAAGAAGCCATGTT+TGG | 0.437610 | 6_3:+16933588 | Msa0942300:CDS |
| TGCTATCCTTCTATGGCCAC+TGG | 0.437738 | 6_3:+16932693 | Msa0942300:CDS |
| CTTGGAAAGCAAGATCCTTC+CGG | 0.439978 | 6_3:-16932999 | None:intergenic |
| TGAGTATCTTTCTCGGTGCT+CGG | 0.441040 | 6_3:+16932749 | Msa0942300:CDS |
| GTAATAGTGAGTATCTTTCT+CGG | 0.446559 | 6_3:+16932742 | Msa0942300:CDS |
| AAGGCAACACATGATATAAT+CGG | 0.450647 | 6_3:-16932562 | None:intergenic |
| TCTTCATGTAGGAGAAACTT+TGG | 0.451723 | 6_3:+16933539 | Msa0942300:CDS |
| ACGTGAAATAGTCTTTGTTA+AGG | 0.456904 | 6_3:-16933203 | None:intergenic |
| ACACATATTGTCTCCAAGAA+AGG | 0.461105 | 6_3:-16932655 | None:intergenic |
| TATCAATATACCCGAGGAAT+CGG | 0.463010 | 6_3:-16933685 | None:intergenic |
| GAGTATCTTTCTCGGTGCTC+GGG | 0.463608 | 6_3:+16932750 | Msa0942300:CDS |
| TTGGTGGTCCGTCTTGTCTC+AGG | 0.469442 | 6_3:-16932367 | None:intergenic |
| TCTGTTTGAAGTAGTTAGTT+CGG | 0.473724 | 6_3:-16933832 | None:intergenic |
| CATGTATGGGACTTTACATA+AGG | 0.474384 | 6_3:-16932581 | None:intergenic |
| TCTATTAAAGCCGATTCCTC+GGG | 0.475474 | 6_3:+16933675 | Msa0942300:CDS |
| AGACAAGACGGACCACCAAC+CGG | 0.475822 | 6_3:+16932371 | Msa0942300:CDS |
| TGATCTTTAATGATCAAAAG+TGG | 0.480904 | 6_3:-16933888 | None:intergenic |
| TCTAGCCAATGCGTCGAGTT+CGG | 0.487634 | 6_3:-16934039 | None:intergenic |
| ACCTGTGAATGCTATAGAAA+GGG | 0.490662 | 6_3:+16934570 | Msa0942300:three_prime_UTR |
| TACCTGTGAATGCTATAGAA+AGG | 0.491128 | 6_3:+16934569 | Msa0942300:three_prime_UTR |
| CCTGATTTCGTAATATTCTC+CGG | 0.491674 | 6_3:-16932390 | None:intergenic |
| CGGAAGGATCTTGCTTTCCA+AGG | 0.495581 | 6_3:+16933000 | Msa0942300:CDS |
| TGGCCAGTGTTGGGAATTGT+TGG | 0.496525 | 6_3:+16931777 | Msa0942300:CDS |
| AGCTGAGTTGAAACCATTTG+AGG | 0.501739 | 6_3:+16933249 | Msa0942300:CDS |
| TTTACTCTCTTTGCCAAACA+TGG | 0.503256 | 6_3:-16933601 | None:intergenic |
| GGGACATTCTACTTCATAAG+TGG | 0.509605 | 6_3:+16940032 | Msa0942300:three_prime_UTR |
| TGTAGATTTCAAGTACAAGA+AGG | 0.511969 | 6_3:+16939905 | Msa0942300:intron |
| CTGTTGTAGCAGCAATTCTC+GGG | 0.512445 | 6_3:+16932524 | Msa0942300:CDS |
| TCTGATGAAGAATCTGAACT+TGG | 0.513957 | 6_3:+16934448 | Msa0942300:CDS |
| TCCCTTTCTATAGCATTCAC+AGG | 0.515039 | 6_3:-16934571 | None:intergenic |
| GCATCAGGACATTGTGAGAA+AGG | 0.515708 | 6_3:+16940056 | Msa0942300:three_prime_UTR |
| AAGGATTCAGTGATGGAAGT+TGG | 0.518692 | 6_3:+16939924 | Msa0942300:three_prime_UTR |
| GGAGAAACTTTGGTTTCTCA+AGG | 0.518950 | 6_3:+16933549 | Msa0942300:CDS |
| TTTCTATAGCATTCACAGGT+AGG | 0.519094 | 6_3:-16934567 | None:intergenic |
| ACATCTTGGTGGGAGTGTAA+TGG | 0.523834 | 6_3:+16929464 | Msa0942300:exon |
| GGAAACTCAGCTATCATACT+TGG | 0.524746 | 6_3:+16931553 | Msa0942300:CDS |
| AGGATAGCAAGGCCTGCAAA+AGG | 0.529649 | 6_3:-16932679 | None:intergenic |
| TCGTAATATTCTCCGGTTGG+TGG | 0.530909 | 6_3:-16932383 | None:intergenic |
| ATTTCGTAATATTCTCCGGT+TGG | 0.531719 | 6_3:-16932386 | None:intergenic |
| AGTTCAAGTTAAATCATTCA+GGG | 0.532515 | 6_3:+16940012 | Msa0942300:three_prime_UTR |
| CTTCAATGGTGATCCTGATA+GGG | 0.532957 | 6_3:+16933968 | Msa0942300:CDS |
| CACATATTGTCTCCAAGAAA+GGG | 0.540976 | 6_3:-16932654 | None:intergenic |
| TTCAAAGTCAACAAAAGTAA+TGG | 0.543349 | 6_3:+16934424 | Msa0942300:CDS |
| AACCTTTGAAAAGCATGTAT+GGG | 0.550803 | 6_3:-16932594 | None:intergenic |
| TAATGATGTTCTTGACATGC+CGG | 0.552492 | 6_3:+16932980 | Msa0942300:CDS |
| ACTAGCCGAACTCGACGCAT+TGG | 0.553184 | 6_3:+16934034 | Msa0942300:CDS |
| CACATCACAAACTTCAGTAA+TGG | 0.553585 | 6_3:-16931723 | None:intergenic |
| ATCTTTGTAGACATCTTGGT+GGG | 0.562069 | 6_3:+16929454 | Msa0942300:five_prime_UTR |
| TTCAGTGATGGAAGTTGGCA+AGG | 0.562087 | 6_3:+16939929 | Msa0942300:three_prime_UTR |
| AAATCTTTCTGTGTCAGAAG+AGG | 0.562210 | 6_3:+16933923 | Msa0942300:CDS |
| TTGCGATCGGATTCGAGAGG+AGG | 0.564706 | 6_3:-16934011 | None:intergenic |
| GGCCATAAAATCAACAGCAC+TGG | 0.571455 | 6_3:-16931759 | None:intergenic |
| TATCTTTGTAGACATCTTGG+TGG | 0.571684 | 6_3:+16929453 | Msa0942300:five_prime_UTR |
| TTTATTCTAGGCAACATCAA+AGG | 0.573100 | 6_3:+16929555 | Msa0942300:CDS |
| TAAGGACTTAGTTCTTGAGA+AGG | 0.574806 | 6_3:-16933185 | None:intergenic |
| TGAAGAGAACTAATTTGCAA+AGG | 0.577412 | 6_3:-16933950 | None:intergenic |
| TTTGGTGCATACATACTACA+TGG | 0.579461 | 6_3:+16931578 | Msa0942300:CDS |
| CAATGAGGTCACGAAACAAA+CGG | 0.580426 | 6_3:-16932621 | None:intergenic |
| CGTGACCTCATTGGTCGCGA+AGG | 0.581435 | 6_3:+16932631 | Msa0942300:CDS |
| CCGAAGGCCAAACAAGAAAG+AGG | 0.583138 | 6_3:-16932919 | None:intergenic |
| GAGTTCGGCTAGTTTGCGAT+CGG | 0.583405 | 6_3:-16934024 | None:intergenic |
| GAAGACATTTGATATTGTGA+AGG | 0.589826 | 6_3:+16932298 | Msa0942300:CDS |
| GCTTGAAGAAGACAATAAGC+TGG | 0.601464 | 6_3:-16933642 | None:intergenic |
| GTACAAGAAGGATTCAGTGA+TGG | 0.605927 | 6_3:+16939917 | Msa0942300:three_prime_UTR |
| GAAGAGCTTGCTGATAAACA+TGG | 0.607187 | 6_3:+16934343 | Msa0942300:CDS |
| GTATAACAAAATTTATCACA+AGG | 0.619052 | 6_3:+16934272 | Msa0942300:CDS |
| ATGGATGACCTGAGACAAGA+CGG | 0.626405 | 6_3:+16932359 | Msa0942300:CDS |
| ATTGCTGCTACAACAGCACC+AGG | 0.626899 | 6_3:-16932517 | None:intergenic |
| TGGATCCTTAGGATGGAACA+TGG | 0.632406 | 6_3:+16932264 | Msa0942300:intron |
| TGCAAGGAATGTCTTCATGT+AGG | 0.633729 | 6_3:+16933528 | Msa0942300:intron |
| AACTACTTCAAACAGACCAA+AGG | 0.634491 | 6_3:+16933839 | Msa0942300:CDS |
| GATGTTCTTGACATGCCGGA+AGG | 0.637592 | 6_3:+16932984 | Msa0942300:CDS |
| CTTCCAACAATTCCCAACAC+TGG | 0.642388 | 6_3:-16931780 | None:intergenic |
| GTGGCCATAGAAGGATAGCA+AGG | 0.648910 | 6_3:-16932690 | None:intergenic |
| AAATTGCGACAATGTACCGA+AGG | 0.653456 | 6_3:-16932935 | None:intergenic |
| CTTACTTATCAATATACCCG+AGG | 0.670798 | 6_3:-16933691 | None:intergenic |
| ATTGTTGGAAGTATTGTAGG+TGG | 0.684186 | 6_3:+16931792 | Msa0942300:CDS |
| AAGGGCCTTCGCGACCAATG+AGG | 0.687378 | 6_3:-16932636 | None:intergenic |
| CAAAACATACCATAAAACAG+TGG | 0.698483 | 6_3:-16931890 | None:intergenic |
| AGTTTGCGATCGGATTCGAG+AGG | 0.714748 | 6_3:-16934014 | None:intergenic |
| GGACATATTACTGTGTTGTG+AGG | 0.740533 | 6_3:+16931599 | Msa0942300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATTAAATTAAATAAA+AGG | + | chr6_3:16930270-16930289 | Msa0942300:intron | 0.0% |
| !! | ATTTATTAAATTAAATAAAA+GGG | + | chr6_3:16930271-16930290 | Msa0942300:intron | 0.0% |
| !!! | TTTTTTTTTTTTTTTTTTTA+AGG | + | chr6_3:16933062-16933081 | Msa0942300:intron | 0.0% |
| !! | AAAAGAAAAAAAAAAGAAAA+AGG | - | chr6_3:16930218-16930237 | None:intergenic | 10.0% |
| !!! | ATCTTATTAATTGATTTTAT+TGG | + | chr6_3:16930499-16930518 | Msa0942300:intron | 10.0% |
| !!! | TCTTATTAATTGATTTTATT+GGG | + | chr6_3:16930500-16930519 | Msa0942300:intron | 10.0% |
| !!! | TATATATTTTGAAAAATGAA+TGG | - | chr6_3:16931002-16931021 | None:intergenic | 10.0% |
| !!! | TTATTTGAAATTCTTTAAAA+GGG | - | chr6_3:16931073-16931092 | None:intergenic | 10.0% |
| !!! | ATTATTTGAAATTCTTTAAA+AGG | - | chr6_3:16931074-16931093 | None:intergenic | 10.0% |
| !! | AAAGAATTTCAAATAATTTA+AGG | + | chr6_3:16931077-16931096 | Msa0942300:intron | 10.0% |
| !!! | AACAATAATATCTTATTTTA+GGG | - | chr6_3:16932801-16932820 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTAAGGTT+TGG | + | chr6_3:16935159-16935178 | Msa0942300:intron | 10.0% |
| !! | ATAATTAAAAAAATTGGTTA+GGG | - | chr6_3:16935206-16935225 | None:intergenic | 10.0% |
| !! | AATAATTAAAAAAATTGGTT+AGG | - | chr6_3:16935207-16935226 | None:intergenic | 10.0% |
| !! | AAAAAGGTAATAAAATTAAA+TGG | - | chr6_3:16935637-16935656 | None:intergenic | 10.0% |
| !!! | AGAGATTTTTTATTTTTTAA+CGG | + | chr6_3:16936166-16936185 | Msa0942300:intron | 10.0% |
| !!! | CTTTTAAAAACTTATTTTAA+AGG | - | chr6_3:16936574-16936593 | None:intergenic | 10.0% |
| !! | AATTTACTTAATTTATTATC+GGG | - | chr6_3:16937040-16937059 | None:intergenic | 10.0% |
| !! | CTTAAATTTATAATCTAAAA+GGG | - | chr6_3:16937243-16937262 | None:intergenic | 10.0% |
| !!! | AATAATAACTTTTTTTTAAC+GGG | - | chr6_3:16938351-16938370 | None:intergenic | 10.0% |
| !! | TATTTGACAAAATATTATAT+TGG | - | chr6_3:16938975-16938994 | None:intergenic | 10.0% |
| !!! | AAATAAATTTTATGAAGCAT+AGG | + | chr6_3:16929807-16929826 | Msa0942300:intron | 15.0% |
| !!! | AATTAAGTTGATTATTCAAA+CGG | - | chr6_3:16929912-16929931 | None:intergenic | 15.0% |
| !! | ATGTAAATAAGAAAAAGTAA+TGG | + | chr6_3:16930456-16930475 | Msa0942300:intron | 15.0% |
| !! | AAAAAAGAGATTAAAATATG+AGG | + | chr6_3:16930948-16930967 | Msa0942300:intron | 15.0% |
| !!! | ATTGTTTGTATGTATATTTT+TGG | - | chr6_3:16931041-16931060 | None:intergenic | 15.0% |
| !! | AATGTAGAAAAACAATAATA+AGG | - | chr6_3:16931108-16931127 | None:intergenic | 15.0% |
| !!! | GAACAATAATATCTTATTTT+AGG | - | chr6_3:16932802-16932821 | None:intergenic | 15.0% |
| !!! | GTAAAATACTGAAATTTTAT+TGG | - | chr6_3:16934120-16934139 | None:intergenic | 15.0% |
| !! | AAATACATAACTGTAAAAAA+TGG | + | chr6_3:16934804-16934823 | Msa0942300:intron | 15.0% |
| !! | TCTACTTATATATATAAGAA+AGG | + | chr6_3:16935064-16935083 | Msa0942300:intron | 15.0% |
| !! | TAATTAAAAAAATTGGTTAG+GGG | - | chr6_3:16935205-16935224 | None:intergenic | 15.0% |
| !! | TACTTAATTGATATTGTATT+CGG | - | chr6_3:16935405-16935424 | None:intergenic | 15.0% |
| !! | TGGAAAATAGTTAAAAAAAT+TGG | - | chr6_3:16935912-16935931 | None:intergenic | 15.0% |
| !! | AAAATGATATAAATCAAGTA+GGG | + | chr6_3:16936696-16936715 | Msa0942300:intron | 15.0% |
| !! | GCTTAAATTTATAATCTAAA+AGG | - | chr6_3:16937244-16937263 | None:intergenic | 15.0% |
| !! | ATCATATTAAACAAATTACA+AGG | - | chr6_3:16937970-16937989 | None:intergenic | 15.0% |
| !! | AAATAAATTCAAAACTTCAT+AGG | + | chr6_3:16938384-16938403 | Msa0942300:intron | 15.0% |
| !! | ACAAAATTAAATCTTCAAAA+TGG | - | chr6_3:16938879-16938898 | None:intergenic | 15.0% |
| !!! | CTAAATTGAAATTTTTCATA+TGG | - | chr6_3:16939130-16939149 | None:intergenic | 15.0% |
| !!! | TTTATTTGACTTAGTTAATA+GGG | - | chr6_3:16939174-16939193 | None:intergenic | 15.0% |
| !!! | ATTTATTTGACTTAGTTAAT+AGG | - | chr6_3:16939175-16939194 | None:intergenic | 15.0% |
| !!! | TTTTCATCAATATAATTTCA+AGG | + | chr6_3:16939648-16939667 | Msa0942300:intron | 15.0% |
| !! | TTTATACAATAAAAATGACA+CGG | + | chr6_3:16939706-16939725 | Msa0942300:intron | 15.0% |
| !!! | TTCTAAAAGTTCCAAAAAAA+AGG | + | chr6_3:16929335-16929354 | Msa0942300:five_prime_UTR | 20.0% |
| !! | TCTAAAAGTTCCAAAAAAAA+GGG | + | chr6_3:16929336-16929355 | Msa0942300:five_prime_UTR | 20.0% |
| !! | ATCAAAGCATACAAATAATA+TGG | - | chr6_3:16929602-16929621 | None:intergenic | 20.0% |
| !! | TAATCATCAATAAAACATGT+TGG | - | chr6_3:16929753-16929772 | None:intergenic | 20.0% |
| !!! | ATGAAAAAGTATATGATGAA+TGG | + | chr6_3:16929854-16929873 | Msa0942300:intron | 20.0% |
| !! | GGTAAATAAGAATATAAAAG+TGG | + | chr6_3:16929875-16929894 | Msa0942300:intron | 20.0% |
| !!! | ATTAAGTTGATTATTCAAAC+GGG | - | chr6_3:16929911-16929930 | None:intergenic | 20.0% |
| !!! | AATCTATTTTGAAGAGTTTT+TGG | + | chr6_3:16930036-16930055 | Msa0942300:intron | 20.0% |
| !! | AATGAAATCTCAATGTAAAT+TGG | - | chr6_3:16930150-16930169 | None:intergenic | 20.0% |
| !! | AAAAAAAGAAAAAGGAGTTT+GGG | - | chr6_3:16930210-16930229 | None:intergenic | 20.0% |
| !! | AAAAAAAAGAAAAAGGAGTT+TGG | - | chr6_3:16930211-16930230 | None:intergenic | 20.0% |
| !! | ATAAAAGGGAACAAAATTAT+TGG | + | chr6_3:16930285-16930304 | Msa0942300:intron | 20.0% |
| !!! | TTCTTATTTACATCAAGTTT+AGG | - | chr6_3:16930449-16930468 | None:intergenic | 20.0% |
| !! | ACTTAACTCTCTTAATTATT+TGG | + | chr6_3:16930613-16930632 | Msa0942300:intron | 20.0% |
| !!! | AGTCAATATTTTTTTGAAAG+AGG | + | chr6_3:16930689-16930708 | Msa0942300:intron | 20.0% |
| !!! | GTATATTTTTGGTAAAAGAA+TGG | - | chr6_3:16931030-16931049 | None:intergenic | 20.0% |
| !!! | TTATTGTTTTTCTACATTGA+TGG | + | chr6_3:16931110-16931129 | Msa0942300:intron | 20.0% |
| !!! | TGCAAAATGAAGAATTTTTT+TGG | + | chr6_3:16931141-16931160 | Msa0942300:intron | 20.0% |
| !! | TATTCTATTATGCAATACTT+TGG | - | chr6_3:16931332-16931351 | None:intergenic | 20.0% |
| !!! | ACGTGTTATTAGATATAAAA+AGG | + | chr6_3:16931968-16931987 | Msa0942300:intron | 20.0% |
| !! | ATTACGTAATGAATATAACA+AGG | - | chr6_3:16932152-16932171 | None:intergenic | 20.0% |
| !! | TTAACTACATATTTGAACTA+TGG | + | chr6_3:16932171-16932190 | Msa0942300:intron | 20.0% |
| !! | TAAAATTTCACAGAAAATCA+AGG | - | chr6_3:16932454-16932473 | None:intergenic | 20.0% |
| !! | AAAAAAAACGTGTATTACAA+AGG | - | chr6_3:16933040-16933059 | None:intergenic | 20.0% |
| !! | TTAATTAAGCACTTCTAATA+TGG | + | chr6_3:16933767-16933786 | Msa0942300:intron | 20.0% |
| !!! | AGGGTAAAAAATTTAACTTT+TGG | + | chr6_3:16933987-16934006 | Msa0942300:CDS | 20.0% |
| !! | GTATAACAAAATTTATCACA+AGG | + | chr6_3:16934272-16934291 | Msa0942300:CDS | 20.0% |
| !! | TTATGTATTTATTCATCAAC+CGG | - | chr6_3:16934794-16934813 | None:intergenic | 20.0% |
| !! | AAAAATAAAGAAAAAGTTCC+CGG | - | chr6_3:16935534-16935553 | None:intergenic | 20.0% |
| !! | TCCTTAAAAAATTAATGGAA+CGG | - | chr6_3:16935610-16935629 | None:intergenic | 20.0% |
| !! | GAATCTCCTTAAAAAATTAA+TGG | - | chr6_3:16935615-16935634 | None:intergenic | 20.0% |
| !!! | TTTTATTACCTTTTTTTCGA+AGG | + | chr6_3:16935642-16935661 | Msa0942300:intron | 20.0% |
| !! | ATAAAATTCCTTCGAAAAAA+AGG | - | chr6_3:16935653-16935672 | None:intergenic | 20.0% |
| !! | GAAAGGAGATAAAAATATTT+GGG | - | chr6_3:16935765-16935784 | None:intergenic | 20.0% |
| !! | AGAAAGGAGATAAAAATATT+TGG | - | chr6_3:16935766-16935785 | None:intergenic | 20.0% |
| !!! | ATAATTTTTTTAGTGTTGCT+TGG | + | chr6_3:16935871-16935890 | Msa0942300:intron | 20.0% |
| !! | AATAGTTAAAAAAATTGGTG+AGG | - | chr6_3:16935907-16935926 | None:intergenic | 20.0% |
| !!! | ACTATTTAAAACTAAGTTGA+TGG | + | chr6_3:16935982-16936001 | Msa0942300:intron | 20.0% |
| !!! | ATTTTGTGTCATGTAAATAT+TGG | + | chr6_3:16936253-16936272 | Msa0942300:intron | 20.0% |
| !! | TTGTAAAAAAATTGTTCTGA+AGG | - | chr6_3:16936439-16936458 | None:intergenic | 20.0% |
| !! | CAAAATGATATAAATCAAGT+AGG | + | chr6_3:16936695-16936714 | Msa0942300:intron | 20.0% |
| !! | CATATCTTATTACTTAAAGT+TGG | + | chr6_3:16937080-16937099 | Msa0942300:intron | 20.0% |
| !!! | TTTTCTTAAGAAATTAACCT+GGG | + | chr6_3:16937164-16937183 | Msa0942300:intron | 20.0% |
| !!! | GATAATATATGCATGTATTT+TGG | - | chr6_3:16937453-16937472 | None:intergenic | 20.0% |
| !!! | ATTCACTTTTAATAAAGAGA+GGG | - | chr6_3:16937896-16937915 | None:intergenic | 20.0% |
| !! | ATAGGAATACTATAAATCAT+AGG | - | chr6_3:16938206-16938225 | None:intergenic | 20.0% |
| !! | CAATAAAGCACATAAATTAT+AGG | - | chr6_3:16938232-16938251 | None:intergenic | 20.0% |
| !!! | TTGATTTTAAGACATTTTGT+TGG | + | chr6_3:16938275-16938294 | Msa0942300:intron | 20.0% |
| !! | AACACAAAATGATATAAATC+AGG | + | chr6_3:16938594-16938613 | Msa0942300:intron | 20.0% |
| !! | ATGTCAAAATGATATAAATC+AGG | + | chr6_3:16938744-16938763 | Msa0942300:intron | 20.0% |
| !! | AGATAGATATCAATTATTAC+TGG | + | chr6_3:16938799-16938818 | Msa0942300:intron | 20.0% |
| !! | GTACTCTAAATATTGTATTA+TGG | + | chr6_3:16938915-16938934 | Msa0942300:intron | 20.0% |
| !! | TGACAAAATATTATATTGGA+AGG | - | chr6_3:16938971-16938990 | None:intergenic | 20.0% |
| !! | TTTCATATGGAAAATTTAGA+GGG | - | chr6_3:16939117-16939136 | None:intergenic | 20.0% |
| !!! | TTTTCATATGGAAAATTTAG+AGG | - | chr6_3:16939118-16939137 | None:intergenic | 20.0% |
| !!! | ATTATTTTCATGTGTGTTAT+GGG | - | chr6_3:16939401-16939420 | None:intergenic | 20.0% |
| !! | TATTGATGAAAATAAAGAGA+GGG | - | chr6_3:16939640-16939659 | None:intergenic | 20.0% |
| !! | ATATTGATGAAAATAAAGAG+AGG | - | chr6_3:16939641-16939660 | None:intergenic | 20.0% |
| !!! | TTTTGGAACTTTTAGAATTG+AGG | - | chr6_3:16929332-16929351 | None:intergenic | 25.0% |
| ! | CAAAAAAAAGGGAAGAAAAT+GGG | + | chr6_3:16929347-16929366 | Msa0942300:five_prime_UTR | 25.0% |
| ! | AAAAAAAAGGGAAGAAAATG+GGG | + | chr6_3:16929348-16929367 | Msa0942300:five_prime_UTR | 25.0% |
| ! | AGATGTAGAAAAAGAAGAAA+AGG | - | chr6_3:16929386-16929405 | None:intergenic | 25.0% |
| !! | TTCTTCTTTTTCTACATCTA+TGG | + | chr6_3:16929387-16929406 | Msa0942300:five_prime_UTR | 25.0% |
| !!! | ATGATTTTTGGTCTTCAATA+TGG | + | chr6_3:16929496-16929515 | Msa0942300:CDS | 25.0% |
| ! | ATAAAAAGGCTGATGAAATA+TGG | - | chr6_3:16929540-16929559 | None:intergenic | 25.0% |
| !! | CAACATCAAAGGTAAATTTT+AGG | + | chr6_3:16929566-16929585 | Msa0942300:intron | 25.0% |
| !! | ATTTTATGAAGCATAGGATT+TGG | + | chr6_3:16929813-16929832 | Msa0942300:intron | 25.0% |
| ! | ACATTGAGATTTCATTTACA+AGG | + | chr6_3:16930154-16930173 | Msa0942300:intron | 25.0% |
| ! | CATTGAGATTTCATTTACAA+GGG | + | chr6_3:16930155-16930174 | Msa0942300:intron | 25.0% |
| ! | ATTGAGATTTCATTTACAAG+GGG | + | chr6_3:16930156-16930175 | Msa0942300:intron | 25.0% |
| ! | AAAAAAGAAAAAGGAGTTTG+GGG | - | chr6_3:16930209-16930228 | None:intergenic | 25.0% |
| ! | AAAGTGATCATAAATGTGTT+TGG | - | chr6_3:16930334-16930353 | None:intergenic | 25.0% |
| ! | TATCTTAGAGTTAAGAAGTA+CGG | - | chr6_3:16930362-16930381 | None:intergenic | 25.0% |
| !! | TTATGTTCCCTTATTTATTG+AGG | + | chr6_3:16930387-16930406 | Msa0942300:intron | 25.0% |
| ! | AGAGGTTGTCAATATTTAAA+TGG | + | chr6_3:16930707-16930726 | Msa0942300:intron | 25.0% |
| !! | CATCTTTTTGGATTTGAAAA+AGG | - | chr6_3:16930858-16930877 | None:intergenic | 25.0% |
| !!! | CTTTTTCAAATCCAAAAAGA+TGG | + | chr6_3:16930856-16930875 | Msa0942300:intron | 25.0% |
| ! | GAGATTAAAATATGAGGATT+TGG | + | chr6_3:16930954-16930973 | Msa0942300:intron | 25.0% |
| !!! | GAAGAATTTTTTTGGCTAAT+AGG | + | chr6_3:16931149-16931168 | Msa0942300:intron | 25.0% |
| ! | GTCATGATTAAGCATATTAA+AGG | - | chr6_3:16931529-16931548 | None:intergenic | 25.0% |
| ! | ATATGCTTAATCATGACAAT+TGG | + | chr6_3:16931532-16931551 | Msa0942300:CDS | 25.0% |
| !! | CAAAATTTTCCACTGTTTTA+TGG | + | chr6_3:16931881-16931900 | Msa0942300:CDS | 25.0% |
| !! | TTGATAACAAATTTCGACAA+CGG | - | chr6_3:16932209-16932228 | None:intergenic | 25.0% |
| !!! | TATAATCTCTATTTTGATGC+AGG | + | chr6_3:16932482-16932501 | Msa0942300:intron | 25.0% |
| ! | AAATATCAAACACAAGTCAA+GGG | - | chr6_3:16933104-16933123 | None:intergenic | 25.0% |
| ! | ACTTGTGTTTGATATTTGAT+AGG | + | chr6_3:16933107-16933126 | Msa0942300:intron | 25.0% |
| ! | GCAAAAAGATTGAAATATCA+CGG | + | chr6_3:16933143-16933162 | Msa0942300:CDS | 25.0% |
| !!! | TGTAAAAAAAGTACCTCAAA+TGG | - | chr6_3:16933265-16933284 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCGAATA+GGG | - | chr6_3:16933751-16933770 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCGAAT+AGG | - | chr6_3:16933752-16933771 | None:intergenic | 25.0% |
| !!! | TAATGATCAAAAGTGGATTA+AGG | - | chr6_3:16933884-16933903 | None:intergenic | 25.0% |
| ! | TGATCTTTAATGATCAAAAG+TGG | - | chr6_3:16933891-16933910 | None:intergenic | 25.0% |
| !!! | GTTAAATTTTTTACCCTATC+AGG | - | chr6_3:16933984-16934003 | None:intergenic | 25.0% |
| ! | CAGCGATATAAACATAATAA+CGG | - | chr6_3:16934142-16934161 | None:intergenic | 25.0% |
| !!! | TTTTGTACTTATTTCTGTGA+AGG | + | chr6_3:16934242-16934261 | Msa0942300:intron | 25.0% |
| ! | ATTTCATACTAAAAATCCGA+GGG | - | chr6_3:16934402-16934421 | None:intergenic | 25.0% |
| ! | TTCAAAGTCAACAAAAGTAA+TGG | + | chr6_3:16934424-16934443 | Msa0942300:CDS | 25.0% |
| ! | TATGGGAGAAAATAATTCTA+AGG | + | chr6_3:16934601-16934620 | Msa0942300:intron | 25.0% |
| !! | CATAGTTTAACTGGTTTAAT+CGG | + | chr6_3:16934752-16934771 | Msa0942300:intron | 25.0% |
| ! | TAACTGTAAAAAATGGAAGT+CGG | + | chr6_3:16934811-16934830 | Msa0942300:intron | 25.0% |
| !!! | GCTTTTGGTAATTCAATTAT+TGG | + | chr6_3:16935125-16935144 | Msa0942300:intron | 25.0% |
| ! | ATGTAGAAGCAATTGAATTT+GGG | - | chr6_3:16935306-16935325 | None:intergenic | 25.0% |
| ! | AATGTAGAAGCAATTGAATT+TGG | - | chr6_3:16935307-16935326 | None:intergenic | 25.0% |
| ! | TAGAGAAGTTTGAAAAAAGT+CGG | - | chr6_3:16935361-16935380 | None:intergenic | 25.0% |
| !! | CAAACTTCTCTACATTTTTA+AGG | + | chr6_3:16935369-16935388 | Msa0942300:intron | 25.0% |
| !!! | TACATTTTTAAGGAGAAGTT+AGG | + | chr6_3:16935379-16935398 | Msa0942300:intron | 25.0% |
| ! | TTTGAACGCATAAAATTGAA+TGG | + | chr6_3:16935446-16935465 | Msa0942300:intron | 25.0% |
| !!! | ACCGTTCCATTAATTTTTTA+AGG | + | chr6_3:16935606-16935625 | Msa0942300:intron | 25.0% |
| ! | TAACAAAAAAAACAGACAGA+CGG | - | chr6_3:16935840-16935859 | None:intergenic | 25.0% |
| ! | ATTCTCAAATTTACGAAGAA+TGG | + | chr6_3:16936522-16936541 | Msa0942300:intron | 25.0% |
| ! | TTATATACGTTGAAACTGAA+AGG | + | chr6_3:16936672-16936691 | Msa0942300:intron | 25.0% |
| ! | ATTTAGTATACATTCCTTTC+AGG | - | chr6_3:16936760-16936779 | None:intergenic | 25.0% |
| ! | TTTGACTACCCATTATTATA+TGG | + | chr6_3:16936969-16936988 | Msa0942300:intron | 25.0% |
| ! | CTTAATTTATTATCGGGTAT+GGG | - | chr6_3:16937034-16937053 | None:intergenic | 25.0% |
| ! | ACTTAATTTATTATCGGGTA+TGG | - | chr6_3:16937035-16937054 | None:intergenic | 25.0% |
| !! | GTTTTCTTAAGAAATTAACC+TGG | + | chr6_3:16937163-16937182 | Msa0942300:intron | 25.0% |
| ! | AATACTAAATGTTAGCATAG+TGG | - | chr6_3:16937340-16937359 | None:intergenic | 25.0% |
| ! | TCTATTGAAGTTACATTTCT+TGG | + | chr6_3:16937369-16937388 | Msa0942300:intron | 25.0% |
| ! | ATTCATTGATCTACATGTAT+AGG | - | chr6_3:16937409-16937428 | None:intergenic | 25.0% |
| ! | AGTAATTAAAGAGTTGTTTG+TGG | - | chr6_3:16937574-16937593 | None:intergenic | 25.0% |
| !!! | CATTCACTTTTAATAAAGAG+AGG | - | chr6_3:16937897-16937916 | None:intergenic | 25.0% |
| ! | CAAATATGATTGTTAGCAAA+CGG | + | chr6_3:16938028-16938047 | Msa0942300:intron | 25.0% |
| ! | AAATATGATTGTTAGCAAAC+GGG | + | chr6_3:16938029-16938048 | Msa0942300:intron | 25.0% |
| ! | CACATAAATTATAGGAACAT+AGG | - | chr6_3:16938224-16938243 | None:intergenic | 25.0% |
| !!! | TGGATCATAATTTTTTCCAT+TGG | + | chr6_3:16938295-16938314 | Msa0942300:intron | 25.0% |
| !! | TGGTAAAAAATTTGTTCCAA+TGG | - | chr6_3:16938314-16938333 | None:intergenic | 25.0% |
| !!! | TTTGGTAATAGAGTTTTCAT+TGG | + | chr6_3:16938771-16938790 | Msa0942300:intron | 25.0% |
| ! | AAGAAGAAATTTGCAACTTA+TGG | - | chr6_3:16939091-16939110 | None:intergenic | 25.0% |
| !! | TTATTTTCATGTGTGTTATG+GGG | - | chr6_3:16939400-16939419 | None:intergenic | 25.0% |
| !! | CATTATTTTCATGTGTGTTA+TGG | - | chr6_3:16939402-16939421 | None:intergenic | 25.0% |
| ! | CATAACACACATGAAAATAA+TGG | + | chr6_3:16939400-16939419 | Msa0942300:intron | 25.0% |
| ! | ATTGATGAAAATAAAGAGAG+GGG | - | chr6_3:16939639-16939658 | None:intergenic | 25.0% |
| ! | TGCATTAGATACTTTCATTA+CGG | + | chr6_3:16939843-16939862 | Msa0942300:intron | 25.0% |
| !! | AGTTCAAGTTAAATCATTCA+GGG | + | chr6_3:16940012-16940031 | Msa0942300:three_prime_UTR | 25.0% |
| ! | CCATTTTCTTCCCTTTTTTT+TGG | - | chr6_3:16929349-16929368 | None:intergenic | 30.0% |
| CCAAAAAAAAGGGAAGAAAA+TGG | + | chr6_3:16929346-16929365 | Msa0942300:five_prime_UTR | 30.0% | |
| TAGTATCTTTGTAGACATCT+TGG | + | chr6_3:16929450-16929469 | Msa0942300:five_prime_UTR | 30.0% | |
| ATTGAAGACCAAAAATCATG+AGG | - | chr6_3:16929495-16929514 | None:intergenic | 30.0% | |
| ! | TTCATCAGCCTTTTTATTCT+AGG | + | chr6_3:16929543-16929562 | Msa0942300:CDS | 30.0% |
| TGATGTTGCCTAGAATAAAA+AGG | - | chr6_3:16929554-16929573 | None:intergenic | 30.0% | |
| TTTATTCTAGGCAACATCAA+AGG | + | chr6_3:16929555-16929574 | Msa0942300:CDS | 30.0% | |
| GCTTTATCTTCATTTAGCAA+TGG | + | chr6_3:16929646-16929665 | Msa0942300:intron | 30.0% | |
| CTCAATGTAAATTGGACAAA+TGG | - | chr6_3:16930142-16930161 | None:intergenic | 30.0% | |
| AAAAAGAAAAAGGAGTTTGG+GGG | - | chr6_3:16930208-16930227 | None:intergenic | 30.0% | |
| GAACAGACCTCAATAAATAA+GGG | - | chr6_3:16930397-16930416 | None:intergenic | 30.0% | |
| TAGTGTAACACATATAGTCA+TGG | + | chr6_3:16930800-16930819 | Msa0942300:intron | 30.0% | |
| TTGGATTTGAAAAAGGAACA+AGG | - | chr6_3:16930851-16930870 | None:intergenic | 30.0% | |
| ! | GTTATAAGTTGCCATCTTTT+TGG | - | chr6_3:16930870-16930889 | None:intergenic | 30.0% |
| AAAGCAAAGCAATGAGTTTA+TGG | - | chr6_3:16930902-16930921 | None:intergenic | 30.0% | |
| CTTTCTTAGATGCTCATATT+TGG | - | chr6_3:16930928-16930947 | None:intergenic | 30.0% | |
| ! | TTTCTACATTGATGGCTAAT+AGG | + | chr6_3:16931118-16931137 | Msa0942300:intron | 30.0% |
| ! | GACTCATATTTGCTGATAAA+TGG | + | chr6_3:16931204-16931223 | Msa0942300:intron | 30.0% |
| AGTTAAGGAAATCAATACGA+TGG | - | chr6_3:16931679-16931698 | None:intergenic | 30.0% | |
| TTTACATCTGTAGTCAGTTA+AGG | - | chr6_3:16931694-16931713 | None:intergenic | 30.0% | |
| GACTACAGATGTAAACAATT+AGG | + | chr6_3:16931699-16931718 | Msa0942300:intron | 30.0% | |
| GCTTCAAAAGTAGCAAATAA+TGG | - | chr6_3:16931840-16931859 | None:intergenic | 30.0% | |
| CAAAACATACCATAAAACAG+TGG | - | chr6_3:16931893-16931912 | None:intergenic | 30.0% | |
| AAATGTACAGATGAAAATCG+TGG | - | chr6_3:16932015-16932034 | None:intergenic | 30.0% | |
| TGTCGTATCTGATTTCATAT+TGG | + | chr6_3:16932244-16932263 | Msa0942300:intron | 30.0% | |
| TGATTTCATATTGGATCCTT+AGG | + | chr6_3:16932253-16932272 | Msa0942300:intron | 30.0% | |
| GAAGACATTTGATATTGTGA+AGG | + | chr6_3:16932298-16932317 | Msa0942300:CDS | 30.0% | |
| CCATTACAGAGAAATAAGTA+TGG | - | chr6_3:16932343-16932362 | None:intergenic | 30.0% | |
| ! | CCATACTTATTTCTCTGTAA+TGG | + | chr6_3:16932340-16932359 | Msa0942300:CDS | 30.0% |
| AAGGCAACACATGATATAAT+CGG | - | chr6_3:16932565-16932584 | None:intergenic | 30.0% | |
| ! | AACCTTTGAAAAGCATGTAT+GGG | - | chr6_3:16932597-16932616 | None:intergenic | 30.0% |
| GTAATAGTGAGTATCTTTCT+CGG | + | chr6_3:16932742-16932761 | Msa0942300:CDS | 30.0% | |
| CAAATATCAAACACAAGTCA+AGG | - | chr6_3:16933105-16933124 | None:intergenic | 30.0% | |
| !! | ATCTTTTTGCGTCGATATTT+AGG | - | chr6_3:16933133-16933152 | None:intergenic | 30.0% |
| ACGTGAAATAGTCTTTGTTA+AGG | - | chr6_3:16933206-16933225 | None:intergenic | 30.0% | |
| GAGAGTAAAGTCATTAGTAT+TGG | + | chr6_3:16933615-16933634 | Msa0942300:CDS | 30.0% | |
| ! | TCTGTTTGAAGTAGTTAGTT+CGG | - | chr6_3:16933835-16933854 | None:intergenic | 30.0% |
| CATTCAAAAAACTTCTCCTT+TGG | - | chr6_3:16933858-16933877 | None:intergenic | 30.0% | |
| !!! | CAAAGGAGAAGTTTTTTGAA+TGG | + | chr6_3:16933856-16933875 | Msa0942300:CDS | 30.0% |
| ! | TGAAGAGAACTAATTTGCAA+AGG | - | chr6_3:16933953-16933972 | None:intergenic | 30.0% |
| ! | TGCAAATTAGTTCTCTTCAA+TGG | + | chr6_3:16933954-16933973 | Msa0942300:CDS | 30.0% |
| GATTTCATACTAAAAATCCG+AGG | - | chr6_3:16934403-16934422 | None:intergenic | 30.0% | |
| ATAGAAAGGGAATGAAAGTA+TGG | + | chr6_3:16934583-16934602 | Msa0942300:intron | 30.0% | |
| ! | TAGAAAGGGAATGAAAGTAT+GGG | + | chr6_3:16934584-16934603 | Msa0942300:intron | 30.0% |
| AAACCAGTTAAACTATGATG+TGG | - | chr6_3:16934749-16934768 | None:intergenic | 30.0% | |
| GGTAATTCAATTATTGGAAG+TGG | + | chr6_3:16935131-16935150 | Msa0942300:intron | 30.0% | |
| AGAGAAGTTTGAAAAAAGTC+GGG | - | chr6_3:16935360-16935379 | None:intergenic | 30.0% | |
| !! | AAAACTAAGTTGATGGTTCA+TGG | + | chr6_3:16935989-16936008 | Msa0942300:intron | 30.0% |
| !! | TTGATGGTTCATGGTTTTTA+AGG | + | chr6_3:16935998-16936017 | Msa0942300:intron | 30.0% |
| TGAAAGGATAGATGGTAAAA+TGG | - | chr6_3:16936063-16936082 | None:intergenic | 30.0% | |
| GATTACATTGAAAGGATAGA+TGG | - | chr6_3:16936071-16936090 | None:intergenic | 30.0% | |
| ATGCTTAGTAATATTCAGTC+TGG | - | chr6_3:16936096-16936115 | None:intergenic | 30.0% | |
| !!! | TATTGGTGTTAATCCCTTTT+TGG | + | chr6_3:16936270-16936289 | Msa0942300:intron | 30.0% |
| TGTCATAGAGTTACCAAAAA+GGG | - | chr6_3:16936286-16936305 | None:intergenic | 30.0% | |
| TATTTGTGATGCATGGTTTA+AGG | - | chr6_3:16936483-16936502 | None:intergenic | 30.0% | |
| AACCATGCATCACAAATATT+TGG | + | chr6_3:16936485-16936504 | Msa0942300:intron | 30.0% | |
| ATCCAAATATTTGTGATGCA+TGG | - | chr6_3:16936490-16936509 | None:intergenic | 30.0% | |
| AAGGAGAGATGTTCAAATTA+CGG | - | chr6_3:16936555-16936574 | None:intergenic | 30.0% | |
| ATGATATAAATCAAGTAGGG+AGG | + | chr6_3:16936699-16936718 | Msa0942300:intron | 30.0% | |
| TTTCACATGATCTACAACAA+AGG | - | chr6_3:16936798-16936817 | None:intergenic | 30.0% | |
| ! | TTTGTTGTAGATCATGTGAA+AGG | + | chr6_3:16936797-16936816 | Msa0942300:intron | 30.0% |
| TGTGAAAGGATTTATATACG+TGG | + | chr6_3:16936811-16936830 | Msa0942300:intron | 30.0% | |
| GTCTGTGTCCATATAATAAT+GGG | - | chr6_3:16936980-16936999 | None:intergenic | 30.0% | |
| TGTCTGTGTCCATATAATAA+TGG | - | chr6_3:16936981-16937000 | None:intergenic | 30.0% | |
| TTATTATATGGACACAGACA+CGG | + | chr6_3:16936981-16937000 | Msa0942300:intron | 30.0% | |
| TTAAGCAATTACAAATGTGC+TGG | + | chr6_3:16937258-16937277 | Msa0942300:intron | 30.0% | |
| ! | ACAAAAACTCATTGATAACC+TGG | + | chr6_3:16937523-16937542 | Msa0942300:intron | 30.0% |
| AAAATTGAAACACGTGTAAC+AGG | + | chr6_3:16937624-16937643 | Msa0942300:intron | 30.0% | |
| !! | TCTTTGAAATGGTCAACATT+TGG | - | chr6_3:16937685-16937704 | None:intergenic | 30.0% |
| AAATGTTGACCATTTCAAAG+AGG | + | chr6_3:16937684-16937703 | Msa0942300:intron | 30.0% | |
| TCCACAACTTGTATCAATTT+CGG | - | chr6_3:16937751-16937770 | None:intergenic | 30.0% | |
| GATTAGGAATGTCCTTAAAA+TGG | - | chr6_3:16937824-16937843 | None:intergenic | 30.0% | |
| !! | ATATGATGCCTTTTATTTGC+AGG | + | chr6_3:16937983-16938002 | Msa0942300:intron | 30.0% |
| AATATGATTGTTAGCAAACG+GGG | + | chr6_3:16938030-16938049 | Msa0942300:intron | 30.0% | |
| ! | TTCTATACTCTTTTGCTTAG+TGG | + | chr6_3:16938150-16938169 | Msa0942300:intron | 30.0% |
| TCTTAAAATCAAAGTGATGC+AGG | - | chr6_3:16938267-16938286 | None:intergenic | 30.0% | |
| !! | AACGGGTTGAATAATGTATT+TGG | - | chr6_3:16938334-16938353 | None:intergenic | 30.0% |
| CGGGTATCATATTTATACAA+CGG | + | chr6_3:16938475-16938494 | Msa0942300:intron | 30.0% | |
| GGGTATCATATTTATACAAC+GGG | + | chr6_3:16938476-16938495 | Msa0942300:intron | 30.0% | |
| GGTATCATATTTATACAACG+GGG | + | chr6_3:16938477-16938496 | Msa0942300:intron | 30.0% | |
| ATGATATAAATCAGGTAGAG+AGG | + | chr6_3:16938602-16938621 | Msa0942300:intron | 30.0% | |
| ATTTAGTATCCAGTTCTTTC+AGG | - | chr6_3:16938663-16938682 | None:intergenic | 30.0% | |
| AAGAACTGGATACTAAATTG+CGG | + | chr6_3:16938665-16938684 | Msa0942300:intron | 30.0% | |
| TTTCACATGAACTACAACAA+AGG | - | chr6_3:16938701-16938720 | None:intergenic | 30.0% | |
| ! | TTTGTTGTAGTTCATGTGAA+AGG | + | chr6_3:16938700-16938719 | Msa0942300:intron | 30.0% |
| ! | ATGAAAACGTATTTTGTCAG+CGG | - | chr6_3:16938838-16938857 | None:intergenic | 30.0% |
| ! | TTTAGAGTACTCTTGCATTA+CGG | - | chr6_3:16938905-16938924 | None:intergenic | 30.0% |
| ATTTGCAACTTATGGATCAT+GGG | - | chr6_3:16939083-16939102 | None:intergenic | 30.0% | |
| AATTTGCAACTTATGGATCA+TGG | - | chr6_3:16939084-16939103 | None:intergenic | 30.0% | |
| !! | TGGTTTTACAAGAGTTGTAT+GGG | - | chr6_3:16939274-16939293 | None:intergenic | 30.0% |
| !!! | TTGGTTTTACAAGAGTTGTA+TGG | - | chr6_3:16939275-16939294 | None:intergenic | 30.0% |
| !!! | GTGAAAGTTTTGAGGAATTA+AGG | - | chr6_3:16939340-16939359 | None:intergenic | 30.0% |
| ! | TATTTTCATGTGTGTTATGG+GGG | - | chr6_3:16939399-16939418 | None:intergenic | 30.0% |
| ACACCGATATCTACAATATT+TGG | + | chr6_3:16939564-16939583 | Msa0942300:intron | 30.0% | |
| CACCGATATCTACAATATTT+GGG | + | chr6_3:16939565-16939584 | Msa0942300:intron | 30.0% | |
| AGCCCAAATATTGTAGATAT+CGG | - | chr6_3:16939570-16939589 | None:intergenic | 30.0% | |
| AAAATAAAGAGAGGGGTTTA+GGG | - | chr6_3:16939632-16939651 | None:intergenic | 30.0% | |
| !!! | AAGGTTTTAAATTGCAGTCA+CGG | + | chr6_3:16939667-16939686 | Msa0942300:intron | 30.0% |
| !! | ATGAAAGTATCTAATGCATG+TGG | - | chr6_3:16939841-16939860 | None:intergenic | 30.0% |
| ! | TGTAGATTTCAAGTACAAGA+AGG | + | chr6_3:16939905-16939924 | Msa0942300:intron | 30.0% |
| CCATTGTTTGAGAAAAATGT+TGG | - | chr6_3:16939984-16940003 | None:intergenic | 30.0% | |
| ! | CCAACATTTTTCTCAAACAA+TGG | + | chr6_3:16939981-16940000 | Msa0942300:three_prime_UTR | 30.0% |
| ! | GAGTTCAAGTTAAATCATTC+AGG | + | chr6_3:16940011-16940030 | Msa0942300:three_prime_UTR | 30.0% |
| TATCTTTGTAGACATCTTGG+TGG | + | chr6_3:16929453-16929472 | Msa0942300:five_prime_UTR | 35.0% | |
| ATCTTTGTAGACATCTTGGT+GGG | + | chr6_3:16929454-16929473 | Msa0942300:five_prime_UTR | 35.0% | |
| TGGTAGTAACAAACTGAGTT+AGG | - | chr6_3:16929733-16929752 | None:intergenic | 35.0% | |
| GGAACAGACCTCAATAAATA+AGG | - | chr6_3:16930398-16930417 | None:intergenic | 35.0% | |
| !! | TGACGATCGTACTCTAAAAT+CGG | - | chr6_3:16931464-16931483 | None:intergenic | 35.0% |
| ! | ATCTCTCTCAAACTGTTTTC+AGG | + | chr6_3:16931490-16931509 | Msa0942300:intron | 35.0% |
| ! | TTTGGTGCATACATACTACA+TGG | + | chr6_3:16931578-16931597 | Msa0942300:CDS | 35.0% |
| CACATCACAAACTTCAGTAA+TGG | - | chr6_3:16931726-16931745 | None:intergenic | 35.0% | |
| !!! | TACCAGTGCTGTTGATTTTA+TGG | + | chr6_3:16931757-16931776 | Msa0942300:CDS | 35.0% |
| ! | TTGATTTTATGGCCAGTGTT+GGG | + | chr6_3:16931768-16931787 | Msa0942300:CDS | 35.0% |
| !! | GGAATTGTTGGAAGTATTGT+AGG | + | chr6_3:16931789-16931808 | Msa0942300:CDS | 35.0% |
| !! | ATTGTTGGAAGTATTGTAGG+TGG | + | chr6_3:16931792-16931811 | Msa0942300:CDS | 35.0% |
| !!! | GCTACTTTTGAAGCTATTGA+AGG | + | chr6_3:16931846-16931865 | Msa0942300:CDS | 35.0% |
| !! | GTACATTTTAACACAGATCG+TGG | + | chr6_3:16932027-16932046 | Msa0942300:intron | 35.0% |
| TTAACACAGATCGTGGTTAA+TGG | + | chr6_3:16932034-16932053 | Msa0942300:intron | 35.0% | |
| ! | GATTTTAAACGTCGTTTGCT+AGG | - | chr6_3:16932088-16932107 | None:intergenic | 35.0% |
| TTCATATTGGATCCTTAGGA+TGG | + | chr6_3:16932257-16932276 | Msa0942300:intron | 35.0% | |
| ATTTCGTAATATTCTCCGGT+TGG | - | chr6_3:16932389-16932408 | None:intergenic | 35.0% | |
| CCTGATTTCGTAATATTCTC+CGG | - | chr6_3:16932393-16932412 | None:intergenic | 35.0% | |
| CATGTATGGGACTTTACATA+AGG | - | chr6_3:16932584-16932603 | None:intergenic | 35.0% | |
| ! | CAACCTTTGAAAAGCATGTA+TGG | - | chr6_3:16932598-16932617 | None:intergenic | 35.0% |
| ! | CATACATGCTTTTCAAAGGT+TGG | + | chr6_3:16932596-16932615 | Msa0942300:CDS | 35.0% |
| CACATATTGTCTCCAAGAAA+GGG | - | chr6_3:16932657-16932676 | None:intergenic | 35.0% | |
| ACACATATTGTCTCCAAGAA+AGG | - | chr6_3:16932658-16932677 | None:intergenic | 35.0% | |
| !!! | TATTTTAGGGCTAACCTGAT+AGG | - | chr6_3:16932788-16932807 | None:intergenic | 35.0% |
| AGCACAACACAACATGATAT+AGG | - | chr6_3:16932824-16932843 | None:intergenic | 35.0% | |
| TAATGATGTTCTTGACATGC+CGG | + | chr6_3:16932980-16932999 | Msa0942300:CDS | 35.0% | |
| ! | TAAGGACTTAGTTCTTGAGA+AGG | - | chr6_3:16933188-16933207 | None:intergenic | 35.0% |
| ! | ATGTGCTATTACAGCAAATG+CGG | - | chr6_3:16933316-16933335 | None:intergenic | 35.0% |
| TCTTCATGTAGGAGAAACTT+TGG | + | chr6_3:16933539-16933558 | Msa0942300:CDS | 35.0% | |
| TTTACTCTCTTTGCCAAACA+TGG | - | chr6_3:16933604-16933623 | None:intergenic | 35.0% | |
| TATCAATATACCCGAGGAAT+CGG | - | chr6_3:16933688-16933707 | None:intergenic | 35.0% | |
| CTTACTTATCAATATACCCG+AGG | - | chr6_3:16933694-16933713 | None:intergenic | 35.0% | |
| AACTACTTCAAACAGACCAA+AGG | + | chr6_3:16933839-16933858 | Msa0942300:CDS | 35.0% | |
| AAATCTTTCTGTGTCAGAAG+AGG | + | chr6_3:16933923-16933942 | Msa0942300:CDS | 35.0% | |
| GCTGAATTCTCATTGAATGT+CGG | + | chr6_3:16934158-16934177 | Msa0942300:intron | 35.0% | |
| !! | TTATTTCTGTGAAGGCTTCA+AGG | + | chr6_3:16934250-16934269 | Msa0942300:intron | 35.0% |
| ! | TCGAATCGTCTTTTGTATGT+CGG | - | chr6_3:16934301-16934320 | None:intergenic | 35.0% |
| TCTGATGAAGAATCTGAACT+TGG | + | chr6_3:16934448-16934467 | Msa0942300:CDS | 35.0% | |
| TTTCTATAGCATTCACAGGT+AGG | - | chr6_3:16934570-16934589 | None:intergenic | 35.0% | |
| TACCTGTGAATGCTATAGAA+AGG | + | chr6_3:16934569-16934588 | Msa0942300:three_prime_UTR | 35.0% | |
| ACCTGTGAATGCTATAGAAA+GGG | + | chr6_3:16934570-16934589 | Msa0942300:three_prime_UTR | 35.0% | |
| ! | TGGTTTAATCGGTTCAATCA+CGG | + | chr6_3:16934763-16934782 | Msa0942300:intron | 35.0% |
| GATTGTACTGAGATCGAATT+GGG | - | chr6_3:16934851-16934870 | None:intergenic | 35.0% | |
| TGATTGTACTGAGATCGAAT+TGG | - | chr6_3:16934852-16934871 | None:intergenic | 35.0% | |
| AATTAAGATCAAACCAACCG+AGG | + | chr6_3:16934883-16934902 | Msa0942300:intron | 35.0% | |
| TTAAGAATCGATGAGTTCCT+CGG | - | chr6_3:16934903-16934922 | None:intergenic | 35.0% | |
| GTGCAGAGAGAAAAAAATTC+AGG | - | chr6_3:16934975-16934994 | None:intergenic | 35.0% | |
| ! | GGGCAAATTGGTAATTTCAA+CGG | - | chr6_3:16935096-16935115 | None:intergenic | 35.0% |
| GGGCAAAAATGGAAATTCAT+AGG | - | chr6_3:16935185-16935204 | None:intergenic | 35.0% | |
| AAATTGGTTAGGGGCAAAAA+TGG | - | chr6_3:16935196-16935215 | None:intergenic | 35.0% | |
| TAGAAGCAATTGAATTTGGG+AGG | - | chr6_3:16935303-16935322 | None:intergenic | 35.0% | |
| AAGTAACATTCAACAGCTTC+TGG | - | chr6_3:16935484-16935503 | None:intergenic | 35.0% | |
| AATGTGTGTATATATTCGCG+AGG | - | chr6_3:16935793-16935812 | None:intergenic | 35.0% | |
| AAGGATAGATGGTAAAATGG+CGG | - | chr6_3:16936060-16936079 | None:intergenic | 35.0% | |
| GTCTGGAAGATTACATTGAA+AGG | - | chr6_3:16936079-16936098 | None:intergenic | 35.0% | |
| CTGTCATAGAGTTACCAAAA+AGG | - | chr6_3:16936287-16936306 | None:intergenic | 35.0% | |
| ! | ATGAAAGCTTTATCAAGAGC+AGG | - | chr6_3:16936358-16936377 | None:intergenic | 35.0% |
| GTGCGTATAATTCACATGAA+AGG | + | chr6_3:16936593-16936612 | Msa0942300:intron | 35.0% | |
| TTTCACATGATCTACAGCAA+AGG | - | chr6_3:16936648-16936667 | None:intergenic | 35.0% | |
| AGTTAATATCTGCCTTTGCT+AGG | + | chr6_3:16936633-16936652 | Msa0942300:intron | 35.0% | |
| GTTAATATCTGCCTTTGCTA+GGG | + | chr6_3:16936846-16936865 | Msa0942300:intron | 35.0% | |
| TTAATATCTGCCTTTGCTAG+GGG | + | chr6_3:16936847-16936866 | Msa0942300:intron | 35.0% | |
| GTATCCACGGGTATAATAAA+CGG | + | chr6_3:16936943-16936962 | Msa0942300:intron | 35.0% | |
| TATCCACGGGTATAATAAAC+GGG | + | chr6_3:16936944-16936963 | Msa0942300:intron | 35.0% | |
| TTGGATTGTATCCATACCTA+CGG | + | chr6_3:16937005-16937024 | Msa0942300:intron | 35.0% | |
| TCTTAAGAAATTAACCTGGG+AGG | + | chr6_3:16937167-16937186 | Msa0942300:intron | 35.0% | |
| CTTAAGAAATTAACCTGGGA+GGG | + | chr6_3:16937168-16937187 | Msa0942300:intron | 35.0% | |
| TTAAGAAATTAACCTGGGAG+GGG | + | chr6_3:16937169-16937188 | Msa0942300:intron | 35.0% | |
| GATTTCAGTTCAAACTCTGA+TGG | - | chr6_3:16937287-16937306 | None:intergenic | 35.0% | |
| ! | AAAACTCATTGATAACCTGG+AGG | + | chr6_3:16937526-16937545 | Msa0942300:intron | 35.0% |
| ! | AAACTCATTGATAACCTGGA+GGG | + | chr6_3:16937527-16937546 | Msa0942300:intron | 35.0% |
| ACCGAAATTGATACAAGTTG+TGG | + | chr6_3:16937747-16937766 | Msa0942300:intron | 35.0% | |
| AATGGACAAGGACAACAATA+AGG | + | chr6_3:16937790-16937809 | Msa0942300:intron | 35.0% | |
| AATGTCCTTAAAATGGATCC+AGG | - | chr6_3:16937817-16937836 | None:intergenic | 35.0% | |
| TTCCTAATCTCTTGAATGAG+AGG | + | chr6_3:16937835-16937854 | Msa0942300:intron | 35.0% | |
| ATCCTCTCATTCAAGAGATT+AGG | - | chr6_3:16937840-16937859 | None:intergenic | 35.0% | |
| TTGAATGAGAGGATCTATGT+TGG | + | chr6_3:16937846-16937865 | Msa0942300:intron | 35.0% | |
| TGAATGAGAGGATCTATGTT+GGG | + | chr6_3:16937847-16937866 | Msa0942300:intron | 35.0% | |
| ATCATATTTATACAACGGGG+CGG | + | chr6_3:16938480-16938499 | Msa0942300:intron | 35.0% | |
| TTTCACATGATCTACAGCAA+AGG | - | chr6_3:16936648-16936667 | None:intergenic | 35.0% | |
| TGATATAAATCAGGCAGCTT+TGG | + | chr6_3:16938753-16938772 | Msa0942300:intron | 35.0% | |
| GATGTAACTAAAAACCATCG+TGG | + | chr6_3:16939057-16939076 | Msa0942300:intron | 35.0% | |
| TACAAGAGTTGTATGGGAAA+TGG | - | chr6_3:16939268-16939287 | None:intergenic | 35.0% | |
| ATGTGTTTATAGAGAGAGTG+GGG | - | chr6_3:16939301-16939320 | None:intergenic | 35.0% | |
| GATGTGTTTATAGAGAGAGT+GGG | - | chr6_3:16939302-16939321 | None:intergenic | 35.0% | |
| AGATGTGTTTATAGAGAGAG+TGG | - | chr6_3:16939303-16939322 | None:intergenic | 35.0% | |
| ! | TGTTTGTGGTGAAAGTTTTG+AGG | - | chr6_3:16939348-16939367 | None:intergenic | 35.0% |
| !!! | TAAGTGCAGAGTTTTGTTTG+TGG | - | chr6_3:16939362-16939381 | None:intergenic | 35.0% |
| ! | GCTTCAACTGAATTTGAAGT+CGG | + | chr6_3:16939506-16939525 | Msa0942300:intron | 35.0% |
| !! | ATATCGGTGTCATTAGAAGA+TGG | - | chr6_3:16939554-16939573 | None:intergenic | 35.0% |
| ATATTTGGGCTTCCAACAAA+AGG | + | chr6_3:16939579-16939598 | Msa0942300:intron | 35.0% | |
| TCCAACAAAAGGTTCCAAAT+TGG | + | chr6_3:16939590-16939609 | Msa0942300:intron | 35.0% | |
| !! | ACCAATTTGGAACCTTTTGT+TGG | - | chr6_3:16939594-16939613 | None:intergenic | 35.0% |
| GAAAATAAAGAGAGGGGTTT+AGG | - | chr6_3:16939633-16939652 | None:intergenic | 35.0% | |
| AAAAATGACACGGTCAAATG+TGG | + | chr6_3:16939716-16939735 | Msa0942300:intron | 35.0% | |
| AAGGTTCATGAATGCGATTA+AGG | - | chr6_3:16939792-16939811 | None:intergenic | 35.0% | |
| ! | GTCAAAGTATCTAATGCATG+TGG | - | chr6_3:16939869-16939888 | None:intergenic | 35.0% |
| ! | TGGAACCTCCTCATGATTTT+TGG | + | chr6_3:16929484-16929503 | Msa0942300:CDS | 40.0% |
| GAAGACCAAAAATCATGAGG+AGG | - | chr6_3:16929492-16929511 | None:intergenic | 40.0% | |
| ! | AATCTAGCTCACGTTCAAAG+TGG | + | chr6_3:16930824-16930843 | Msa0942300:intron | 40.0% |
| GGAAACTCAGCTATCATACT+TGG | + | chr6_3:16931553-16931572 | Msa0942300:CDS | 40.0% | |
| ! | CAGCTATCATACTTGGTCTT+TGG | + | chr6_3:16931560-16931579 | Msa0942300:CDS | 40.0% |
| GGACATATTACTGTGTTGTG+AGG | + | chr6_3:16931599-16931618 | Msa0942300:CDS | 40.0% | |
| !! | GTTGATTTTATGGCCAGTGT+TGG | + | chr6_3:16931767-16931786 | Msa0942300:CDS | 40.0% |
| ! | GCAAACGACGTTTAAAATCG+TGG | + | chr6_3:16932089-16932108 | Msa0942300:intron | 40.0% |
| AATTTCGACAACGGTCTAGA+TGG | - | chr6_3:16932200-16932219 | None:intergenic | 40.0% | |
| CCGGAGAATATTACGAAATC+AGG | + | chr6_3:16932390-16932409 | Msa0942300:CDS | 40.0% | |
| ! | GTCCCATACATGCTTTTCAA+AGG | + | chr6_3:16932592-16932611 | Msa0942300:CDS | 40.0% |
| CAATGAGGTCACGAAACAAA+CGG | - | chr6_3:16932624-16932643 | None:intergenic | 40.0% | |
| ! | ACAATATGTGTGCCTTTTGC+AGG | + | chr6_3:16932667-16932686 | Msa0942300:CDS | 40.0% |
| !! | TGCTATGTGAAGTACTGACA+TGG | + | chr6_3:16932840-16932859 | Msa0942300:intron | 40.0% |
| TTATCTCTCTGTGTCAGTGT+TGG | - | chr6_3:16932887-16932906 | None:intergenic | 40.0% | |
| ACACAGAGAGATAACAATGC+AGG | + | chr6_3:16932893-16932912 | Msa0942300:intron | 40.0% | |
| AAATTGCGACAATGTACCGA+AGG | - | chr6_3:16932938-16932957 | None:intergenic | 40.0% | |
| AGGAGAGAAGAGTAAAACCT+TGG | - | chr6_3:16933020-16933039 | None:intergenic | 40.0% | |
| ! | AGCTGAGTTGAAACCATTTG+AGG | + | chr6_3:16933249-16933268 | Msa0942300:CDS | 40.0% |
| ! | TGTGCTATTACAGCAAATGC+GGG | - | chr6_3:16933315-16933334 | None:intergenic | 40.0% |
| CTCATGAGTCGTGTAGTTAT+TGG | + | chr6_3:16933497-16933516 | Msa0942300:intron | 40.0% | |
| TGAGTCGTGTAGTTATTGGA+TGG | + | chr6_3:16933501-16933520 | Msa0942300:intron | 40.0% | |
| TGCAAGGAATGTCTTCATGT+AGG | + | chr6_3:16933528-16933547 | Msa0942300:intron | 40.0% | |
| ! | GGAGAAACTTTGGTTTCTCA+AGG | + | chr6_3:16933549-16933568 | Msa0942300:CDS | 40.0% |
| GACATACAAGAAGCCATGTT+TGG | + | chr6_3:16933588-16933607 | Msa0942300:CDS | 40.0% | |
| GCTTGAAGAAGACAATAAGC+TGG | - | chr6_3:16933645-16933664 | None:intergenic | 40.0% | |
| ! | CTCTATTAAAGCCGATTCCT+CGG | + | chr6_3:16933674-16933693 | Msa0942300:CDS | 40.0% |
| ! | TCTATTAAAGCCGATTCCTC+GGG | + | chr6_3:16933675-16933694 | Msa0942300:CDS | 40.0% |
| ! | TTGCTGTTCTAGTTGCCTTT+AGG | + | chr6_3:16933725-16933744 | Msa0942300:intron | 40.0% |
| TTTATCCGAATAGGGCCTAA+AGG | - | chr6_3:16933743-16933762 | None:intergenic | 40.0% | |
| TCTTCAATGGTGATCCTGAT+AGG | + | chr6_3:16933967-16933986 | Msa0942300:CDS | 40.0% | |
| CTTCAATGGTGATCCTGATA+GGG | + | chr6_3:16933968-16933987 | Msa0942300:CDS | 40.0% | |
| !! | GAAGAGCTTGCTGATAAACA+TGG | + | chr6_3:16934343-16934362 | Msa0942300:CDS | 40.0% |
| !! | GATCAAAAAGTGCTTTCCCT+CGG | + | chr6_3:16934383-16934402 | Msa0942300:CDS | 40.0% |
| TCCCTTTCTATAGCATTCAC+AGG | - | chr6_3:16934574-16934593 | None:intergenic | 40.0% | |
| CCAGTTAAACTATGATGTGG+AGG | - | chr6_3:16934746-16934765 | None:intergenic | 40.0% | |
| CCTCCACATCATAGTTTAAC+TGG | + | chr6_3:16934743-16934762 | Msa0942300:intron | 40.0% | |
| ATTACCAATTTGCCCCTATG+AGG | + | chr6_3:16935101-16935120 | Msa0942300:intron | 40.0% | |
| TTACCAATTTGCCCCTATGA+GGG | + | chr6_3:16935102-16935121 | Msa0942300:intron | 40.0% | |
| ATTACCAAAAGCCCCTCATA+GGG | - | chr6_3:16935117-16935136 | None:intergenic | 40.0% | |
| AATTACCAAAAGCCCCTCAT+AGG | - | chr6_3:16935118-16935137 | None:intergenic | 40.0% | |
| GATACCTTAATCTCCCACAA+CGG | - | chr6_3:16935331-16935350 | None:intergenic | 40.0% | |
| !!! | TACCTTTTTTCAACTCACGC+CGG | + | chr6_3:16935512-16935531 | Msa0942300:intron | 40.0% |
| ATATTCGCGAGGTTGAAGAA+AGG | - | chr6_3:16935782-16935801 | None:intergenic | 40.0% | |
| AACTCTTTAGCGTCTTGTGT+AGG | - | chr6_3:16936214-16936233 | None:intergenic | 40.0% | |
| ! | TGATGCATGGTTTAAGGCAT+GGG | - | chr6_3:16936477-16936496 | None:intergenic | 40.0% |
| ! | CAGAAGTTTGTTCACCTGAA+AGG | + | chr6_3:16936743-16936762 | Msa0942300:intron | 40.0% |
| ATACCCGTTTATTATACCCG+TGG | - | chr6_3:16936950-16936969 | None:intergenic | 40.0% | |
| TGGATTGTATCCATACCTAC+GGG | + | chr6_3:16937006-16937025 | Msa0942300:intron | 40.0% | |
| TAAGAAATTAACCTGGGAGG+GGG | + | chr6_3:16937170-16937189 | Msa0942300:intron | 40.0% | |
| GCTTGGCATGTAATCTAAAG+AGG | - | chr6_3:16937312-16937331 | None:intergenic | 40.0% | |
| TTAGCATAGTGGTAACTGCT+TGG | - | chr6_3:16937329-16937348 | None:intergenic | 40.0% | |
| !!! | TATGCATGTATTTTGGCAGC+TGG | - | chr6_3:16937446-16937465 | None:intergenic | 40.0% |
| AAGCAAATGCCTATCGTGAT+AGG | + | chr6_3:16937485-16937504 | Msa0942300:intron | 40.0% | |
| AGCAAATGCCTATCGTGATA+GGG | + | chr6_3:16937486-16937505 | Msa0942300:intron | 40.0% | |
| ! | TTAGCTTTCCCTATCACGAT+AGG | - | chr6_3:16937497-16937516 | None:intergenic | 40.0% |
| ! | AACTCATTGATAACCTGGAG+GGG | + | chr6_3:16937528-16937547 | Msa0942300:intron | 40.0% |
| AACACGTGTAACAGGTACAA+AGG | + | chr6_3:16937632-16937651 | Msa0942300:intron | 40.0% | |
| ACACGTGTAACAGGTACAAA+GGG | + | chr6_3:16937633-16937652 | Msa0942300:intron | 40.0% | |
| ! | CACTCAACACCTCTTTGAAA+TGG | - | chr6_3:16937696-16937715 | None:intergenic | 40.0% |
| CAATGAGTTTGCAAGAGCAA+TGG | + | chr6_3:16937772-16937791 | Msa0942300:intron | 40.0% | |
| ! | AAGGACCTGGATCCATTTTA+AGG | + | chr6_3:16937809-16937828 | Msa0942300:intron | 40.0% |
| CCTTCAATGCATAGAAACAG+CGG | - | chr6_3:16938119-16938138 | None:intergenic | 40.0% | |
| ATCAAAGTGATGCAGGTCAT+AGG | - | chr6_3:16938260-16938279 | None:intergenic | 40.0% | |
| CAAAACTTCATAGGTACCCA+TGG | + | chr6_3:16938393-16938412 | Msa0942300:intron | 40.0% | |
| TCATATTTATACAACGGGGC+GGG | + | chr6_3:16938481-16938500 | Msa0942300:intron | 40.0% | |
| GTATCATTATCCGTACCCAT+GGG | + | chr6_3:16938509-16938528 | Msa0942300:intron | 40.0% | |
| GTTTGTTCACCTGAAAGAAC+TGG | + | chr6_3:16938651-16938670 | Msa0942300:intron | 40.0% | |
| AAGAGTTGTATGGGAAATGG+AGG | - | chr6_3:16939265-16939284 | None:intergenic | 40.0% | |
| CAAGAGAAACACAAGTAAGG+TGG | - | chr6_3:16939453-16939472 | None:intergenic | 40.0% | |
| CACCTTACTTGTGTTTCTCT+TGG | + | chr6_3:16939451-16939470 | Msa0942300:intron | 40.0% | |
| AGCCAAGAGAAACACAAGTA+AGG | - | chr6_3:16939456-16939475 | None:intergenic | 40.0% | |
| ! | TTTGAAGTCGGTGACCTAAA+AGG | + | chr6_3:16939518-16939537 | Msa0942300:intron | 40.0% |
| ! | ATGGAACAACCCAACCTTTT+AGG | - | chr6_3:16939535-16939554 | None:intergenic | 40.0% |
| TACGAATGGAGTCACCAATT+TGG | - | chr6_3:16939607-16939626 | None:intergenic | 40.0% | |
| ! | GGTCGGTTCAACTTTCATTA+AGG | + | chr6_3:16939737-16939756 | Msa0942300:intron | 40.0% |
| GTACAAGAAGGATTCAGTGA+TGG | + | chr6_3:16939917-16939936 | Msa0942300:three_prime_UTR | 40.0% | |
| ! | AAGGATTCAGTGATGGAAGT+TGG | + | chr6_3:16939924-16939943 | Msa0942300:three_prime_UTR | 40.0% |
| GGGACATTCTACTTCATAAG+TGG | + | chr6_3:16940032-16940051 | Msa0942300:three_prime_UTR | 40.0% | |
| TACTTCATAAGTGGTGCATC+AGG | + | chr6_3:16940041-16940060 | Msa0942300:three_prime_UTR | 40.0% | |
| ! | ACATCTTGGTGGGAGTGTAA+TGG | + | chr6_3:16929464-16929483 | Msa0942300:exon | 45.0% |
| GAGTCACAAGCACTTTCTTG+TGG | + | chr6_3:16930114-16930133 | Msa0942300:intron | 45.0% | |
| ATTGAGGTCTGTTCCGACTT+TGG | + | chr6_3:16930403-16930422 | Msa0942300:intron | 45.0% | |
| AGTTTCGAGCTCACCAAAGT+CGG | - | chr6_3:16930419-16930438 | None:intergenic | 45.0% | |
| CTAATACACGCTCTAGCGTA+TGG | - | chr6_3:16931230-16931249 | None:intergenic | 45.0% | |
| GGCCATAAAATCAACAGCAC+TGG | - | chr6_3:16931762-16931781 | None:intergenic | 45.0% | |
| CTTCCAACAATTCCCAACAC+TGG | - | chr6_3:16931783-16931802 | None:intergenic | 45.0% | |
| ATTGTAGGTGGTGCAGCTTA+TGG | + | chr6_3:16931804-16931823 | Msa0942300:CDS | 45.0% | |
| ATCGTGGTTAATGAGTTGCG+AGG | - | chr6_3:16931999-16932018 | None:intergenic | 45.0% | |
| ! | ACGTCGTTTGCTAGGATTGT+CGG | - | chr6_3:16932080-16932099 | None:intergenic | 45.0% |
| TGGATCCTTAGGATGGAACA+TGG | + | chr6_3:16932264-16932283 | Msa0942300:intron | 45.0% | |
| ATGGATGACCTGAGACAAGA+CGG | + | chr6_3:16932359-16932378 | Msa0942300:CDS | 45.0% | |
| TCGTAATATTCTCCGGTTGG+TGG | - | chr6_3:16932386-16932405 | None:intergenic | 45.0% | |
| TGCAGGCTGCATTATATTCC+TGG | + | chr6_3:16932499-16932518 | Msa0942300:intron | 45.0% | |
| GCTGTTGTAGCAGCAATTCT+CGG | + | chr6_3:16932523-16932542 | Msa0942300:CDS | 45.0% | |
| CTGTTGTAGCAGCAATTCTC+GGG | + | chr6_3:16932524-16932543 | Msa0942300:CDS | 45.0% | |
| CGTTTGTTTCGTGACCTCAT+TGG | + | chr6_3:16932622-16932641 | Msa0942300:CDS | 45.0% | |
| !! | TGAGTATCTTTCTCGGTGCT+CGG | + | chr6_3:16932749-16932768 | Msa0942300:CDS | 45.0% |
| !! | GTGAAGTACTGACATGGACA+CGG | + | chr6_3:16932846-16932865 | Msa0942300:intron | 45.0% |
| CAGGAGTCCTCTTTCTTGTT+TGG | + | chr6_3:16932912-16932931 | Msa0942300:intron | 45.0% | |
| ! | CCTCTTTCTTGTTTGGCCTT+CGG | + | chr6_3:16932919-16932938 | Msa0942300:CDS | 45.0% |
| CTTGGAAAGCAAGATCCTTC+CGG | - | chr6_3:16933002-16933021 | None:intergenic | 45.0% | |
| ! | GTTATTGGATGGCTTGTGCA+AGG | + | chr6_3:16933512-16933531 | Msa0942300:intron | 45.0% |
| AGTTGCCTTTAGGCCCTATT+CGG | + | chr6_3:16933735-16933754 | Msa0942300:intron | 45.0% | |
| ACTATGATGTGGAGGTCTCA+TGG | - | chr6_3:16934738-16934757 | None:intergenic | 45.0% | |
| TACCAATTTGCCCCTATGAG+GGG | + | chr6_3:16935103-16935122 | Msa0942300:intron | 45.0% | |
| TTACCAAAAGCCCCTCATAG+GGG | - | chr6_3:16935116-16935135 | None:intergenic | 45.0% | |
| TTGCTTCTACATTGCCGTTG+TGG | + | chr6_3:16935314-16935333 | Msa0942300:intron | 45.0% | |
| TGCTTCTACATTGCCGTTGT+GGG | + | chr6_3:16935315-16935334 | Msa0942300:intron | 45.0% | |
| ATTGCCGTTGTGGGAGATTA+AGG | + | chr6_3:16935324-16935343 | Msa0942300:intron | 45.0% | |
| !!! | ACCTTTTTTCAACTCACGCC+GGG | + | chr6_3:16935513-16935532 | Msa0942300:intron | 45.0% |
| TAGCGTCTTGTGTAGGAACT+TGG | - | chr6_3:16936207-16936226 | None:intergenic | 45.0% | |
| ! | GATGCATGGTTTAAGGCATG+GGG | - | chr6_3:16936476-16936495 | None:intergenic | 45.0% |
| ! | GTGATGCATGGTTTAAGGCA+TGG | - | chr6_3:16936478-16936497 | None:intergenic | 45.0% |
| ! | ATTTTTGCCACCCCTAGCAA+AGG | - | chr6_3:16936860-16936879 | None:intergenic | 45.0% |
| GGCAAAAATACCCATGTCCA+CGG | + | chr6_3:16936871-16936890 | Msa0942300:intron | 45.0% | |
| GCAAAAATACCCATGTCCAC+GGG | + | chr6_3:16936872-16936891 | Msa0942300:intron | 45.0% | |
| GGTAGCTAAACTGGTATCCA+CGG | + | chr6_3:16936930-16936949 | Msa0942300:intron | 45.0% | |
| GTAGCTAAACTGGTATCCAC+GGG | + | chr6_3:16936931-16936950 | Msa0942300:intron | 45.0% | |
| ATATGGACACAGACACGGAT+TGG | + | chr6_3:16936986-16937005 | Msa0942300:intron | 45.0% | |
| AAAATATCATTCCCCCTCCC+AGG | - | chr6_3:16937184-16937203 | None:intergenic | 45.0% | |
| ! | ACTCATTGATAACCTGGAGG+GGG | + | chr6_3:16937529-16937548 | Msa0942300:intron | 45.0% |
| CATTTGGAAAGTCTCCAGCA+GGG | - | chr6_3:16937669-16937688 | None:intergenic | 45.0% | |
| ACATTTGGAAAGTCTCCAGC+AGG | - | chr6_3:16937670-16937689 | None:intergenic | 45.0% | |
| GTTTGCAAGAGCAATGGACA+AGG | + | chr6_3:16937778-16937797 | Msa0942300:intron | 45.0% | |
| CAAGGACAACAATAAGGACC+TGG | + | chr6_3:16937796-16937815 | Msa0942300:intron | 45.0% | |
| !! | GCCTTTTATTTGCAGGTACG+TGG | + | chr6_3:16937990-16938009 | Msa0942300:intron | 45.0% |
| GCCACGTACCTGCAAATAAA+AGG | - | chr6_3:16937994-16938013 | None:intergenic | 45.0% | |
| !! | CCGCTGTTTCTATGCATTGA+AGG | + | chr6_3:16938116-16938135 | Msa0942300:intron | 45.0% |
| !! | GTGGGTATTGAGGTATCCAT+GGG | - | chr6_3:16938412-16938431 | None:intergenic | 45.0% |
| CATGGATACCTCAATACCCA+CGG | + | chr6_3:16938411-16938430 | Msa0942300:intron | 45.0% | |
| CATATTTATACAACGGGGCG+GGG | + | chr6_3:16938482-16938501 | Msa0942300:intron | 45.0% | |
| GGTATCATTATCCGTACCCA+TGG | + | chr6_3:16938508-16938527 | Msa0942300:intron | 45.0% | |
| TCAATGGATACCCATGGGTA+CGG | - | chr6_3:16938522-16938541 | None:intergenic | 45.0% | |
| GGATGTCAATGGATACCCAT+GGG | - | chr6_3:16938527-16938546 | None:intergenic | 45.0% | |
| CACATGATCTACAGCAAAGG+CGG | - | chr6_3:16936645-16936664 | None:intergenic | 45.0% | |
| GTATGGGAAATGGAGGTAGT+GGG | - | chr6_3:16939258-16939277 | None:intergenic | 45.0% | |
| TGTATGGGAAATGGAGGTAG+TGG | - | chr6_3:16939259-16939278 | None:intergenic | 45.0% | |
| TATAGAGAGAGTGGGGAAGT+TGG | - | chr6_3:16939294-16939313 | None:intergenic | 45.0% | |
| GAGAAACACAAGTAAGGTGG+TGG | - | chr6_3:16939450-16939469 | None:intergenic | 45.0% | |
| AAGTCGGTGACCTAAAAGGT+TGG | + | chr6_3:16939522-16939541 | Msa0942300:intron | 45.0% | |
| AGTCGGTGACCTAAAAGGTT+GGG | + | chr6_3:16939523-16939542 | Msa0942300:intron | 45.0% | |
| ATGACACGGTCAAATGTGGT+CGG | + | chr6_3:16939720-16939739 | Msa0942300:intron | 45.0% | |
| ! | TTCAGTGATGGAAGTTGGCA+AGG | + | chr6_3:16939929-16939948 | Msa0942300:three_prime_UTR | 45.0% |
| !!! | AAATTTTGTTTTAAAAATAT+TGG | + | chr6_3:16934939-16934958 | Msa0942300:intron | 5.0% |
| !! | AAGAAAATAATTAAAAAAAT+TGG | - | chr6_3:16935212-16935231 | None:intergenic | 5.0% |
| !! | ATAGTTAAAAATATAAAAAT+TGG | - | chr6_3:16935268-16935287 | None:intergenic | 5.0% |
| !! | TTAAAAAAAATAAAGTTAAA+TGG | - | chr6_3:16935587-16935606 | None:intergenic | 5.0% |
| !!! | GTTTTTAAAAATATAAAAAT+TGG | - | chr6_3:16935932-16935951 | None:intergenic | 5.0% |
| !! | TAATTTACTTAATTTATTAT+CGG | - | chr6_3:16937041-16937060 | None:intergenic | 5.0% |
| !!! | AAATAATAACTTTTTTTTAA+CGG | - | chr6_3:16938352-16938371 | None:intergenic | 5.0% |
| !!! | TTTTGAATTTATTTATTTTT+TGG | - | chr6_3:16938378-16938397 | None:intergenic | 5.0% |
| !! | ATTGTATAAATAAATTATAA+CGG | - | chr6_3:16939696-16939715 | None:intergenic | 5.0% |
| !!! | AATTTTTTTAAAGAAAAAAA+AGG | - | chr6_3:16939811-16939830 | None:intergenic | 5.0% |
| !!! | TTTCTTTAAAAAAATTATTA+CGG | + | chr6_3:16939815-16939834 | Msa0942300:intron | 5.0% |
| ! | TGGCCAGTGTTGGGAATTGT+TGG | + | chr6_3:16931777-16931796 | Msa0942300:CDS | 50.0% |
| GTGCTCCATGTTCCATCCTA+AGG | - | chr6_3:16932272-16932291 | None:intergenic | 50.0% | |
| ATTGCTGCTACAACAGCACC+AGG | - | chr6_3:16932520-16932539 | None:intergenic | 50.0% | |
| AGGATAGCAAGGCCTGCAAA+AGG | - | chr6_3:16932682-16932701 | None:intergenic | 50.0% | |
| ! | CAGGCCTTGCTATCCTTCTA+TGG | + | chr6_3:16932686-16932705 | Msa0942300:CDS | 50.0% |
| GTGGCCATAGAAGGATAGCA+AGG | - | chr6_3:16932693-16932712 | None:intergenic | 50.0% | |
| TGCTATCCTTCTATGGCCAC+TGG | + | chr6_3:16932693-16932712 | Msa0942300:CDS | 50.0% | |
| !! | GAGTATCTTTCTCGGTGCTC+GGG | + | chr6_3:16932750-16932769 | Msa0942300:CDS | 50.0% |
| CCGAAGGCCAAACAAGAAAG+AGG | - | chr6_3:16932922-16932941 | None:intergenic | 50.0% | |
| GATGTTCTTGACATGCCGGA+AGG | + | chr6_3:16932984-16933003 | Msa0942300:CDS | 50.0% | |
| CGGAAGGATCTTGCTTTCCA+AGG | + | chr6_3:16933000-16933019 | Msa0942300:CDS | 50.0% | |
| CGGTATCATCAGCTGCATTG+AGG | - | chr6_3:16933815-16933834 | None:intergenic | 50.0% | |
| AGTTTGCGATCGGATTCGAG+AGG | - | chr6_3:16934017-16934036 | None:intergenic | 50.0% | |
| !! | GAGTTCGGCTAGTTTGCGAT+CGG | - | chr6_3:16934027-16934046 | None:intergenic | 50.0% |
| TCTAGCCAATGCGTCGAGTT+CGG | - | chr6_3:16934042-16934061 | None:intergenic | 50.0% | |
| !! | AACTCGACGCATTGGCTAGA+AGG | + | chr6_3:16934042-16934061 | Msa0942300:CDS | 50.0% |
| CGGTTCAATCACGGTTGATC+CGG | + | chr6_3:16934772-16934791 | Msa0942300:intron | 50.0% | |
| GAATCGATGAGTTCCTCGGT+TGG | - | chr6_3:16934899-16934918 | None:intergenic | 50.0% | |
| ! | TCCCGGCGTGAGTTGAAAAA+AGG | - | chr6_3:16935517-16935536 | None:intergenic | 50.0% |
| ATATCTGCCTTTGCTAGGGG+TGG | + | chr6_3:16936850-16936869 | Msa0942300:intron | 50.0% | |
| GGTAAAATCCGTCACGGGTA+TGG | + | chr6_3:16936903-16936922 | Msa0942300:intron | 50.0% | |
| TATGGAGCGGGTAGCTAAAC+TGG | + | chr6_3:16936921-16936940 | Msa0942300:intron | 50.0% | |
| !! | CGTGGGTATTGAGGTATCCA+TGG | - | chr6_3:16938413-16938432 | None:intergenic | 50.0% |
| CGGATGTCAATGGATACCCA+TGG | - | chr6_3:16938528-16938547 | None:intergenic | 50.0% | |
| ACAGCAAAGGCGGATGTCAA+TGG | - | chr6_3:16938538-16938557 | None:intergenic | 50.0% | |
| TTACAAACCCGTGCTTCGCA+CGG | - | chr6_3:16939010-16939029 | None:intergenic | 50.0% | |
| TTATGGATCATGGGCCACGA+TGG | - | chr6_3:16939074-16939093 | None:intergenic | 50.0% | |
| ! | AGGGGTTTAGGGCATACGAA+TGG | - | chr6_3:16939621-16939640 | None:intergenic | 50.0% |
| GCGTGTATTAGCGAAGCGAG+TGG | + | chr6_3:16931239-16931258 | Msa0942300:intron | 55.0% | |
| ! | TTGGTGGTCCGTCTTGTCTC+AGG | - | chr6_3:16932370-16932389 | None:intergenic | 55.0% |
| AGACAAGACGGACCACCAAC+CGG | + | chr6_3:16932371-16932390 | Msa0942300:CDS | 55.0% | |
| GGCTGGAGTTGTTGCCTATC+AGG | + | chr6_3:16932771-16932790 | Msa0942300:CDS | 55.0% | |
| TTGCGATCGGATTCGAGAGG+AGG | - | chr6_3:16934014-16934033 | None:intergenic | 55.0% | |
| ACTAGCCGAACTCGACGCAT+TGG | + | chr6_3:16934034-16934053 | Msa0942300:CDS | 55.0% | |
| AGCCCCTCATAGGGGCAAAT+TGG | - | chr6_3:16935108-16935127 | None:intergenic | 55.0% | |
| ! | TTGCCCCTATGAGGGGCTTT+TGG | + | chr6_3:16935110-16935129 | Msa0942300:intron | 55.0% |
| ! | ATTTTACCCACGGGTACCCG+TGG | - | chr6_3:16936891-16936910 | None:intergenic | 55.0% |
| !!! | CCGTGACGGATTTTACCCAC+GGG | - | chr6_3:16936900-16936919 | None:intergenic | 55.0% |
| CCCGTGGGTAAAATCCGTCA+CGG | + | chr6_3:16936897-16936916 | Msa0942300:intron | 55.0% | |
| !!! | CCCGTGACGGATTTTACCCA+CGG | - | chr6_3:16936901-16936920 | None:intergenic | 55.0% |
| CCGTGGGTAAAATCCGTCAC+GGG | + | chr6_3:16936898-16936917 | Msa0942300:intron | 55.0% | |
| AATCCGTCACGGGTATGGAG+CGG | + | chr6_3:16936908-16936927 | Msa0942300:intron | 55.0% | |
| GGTATGGGTACCCGTAGGTA+TGG | - | chr6_3:16937019-16937038 | None:intergenic | 55.0% | |
| TATCGGGTATGGGTACCCGT+AGG | - | chr6_3:16937024-16937043 | None:intergenic | 55.0% | |
| GAAAGTCTCCAGCAGGGAGA+TGG | - | chr6_3:16937663-16937682 | None:intergenic | 55.0% | |
| ! | ACGGGTATCCGTGGGTATTG+AGG | - | chr6_3:16938422-16938441 | None:intergenic | 55.0% |
| ACCCACGGATACCCGTATAG+TGG | + | chr6_3:16938426-16938445 | Msa0942300:intron | 55.0% | |
| CCCACTATACGGGTATCCGT+GGG | - | chr6_3:16938430-16938449 | None:intergenic | 55.0% | |
| CCCACGGATACCCGTATAGT+GGG | + | chr6_3:16938427-16938446 | Msa0942300:intron | 55.0% | |
| ACCCACTATACGGGTATCCG+TGG | - | chr6_3:16938431-16938450 | None:intergenic | 55.0% | |
| CTCGTGGGTACCCACTATAC+GGG | - | chr6_3:16938440-16938459 | None:intergenic | 55.0% | |
| CCTCGTGGGTACCCACTATA+CGG | - | chr6_3:16938441-16938460 | None:intergenic | 55.0% | |
| AGTGGGTACCCACGAGGATA+CGG | + | chr6_3:16938444-16938463 | Msa0942300:intron | 55.0% | |
| TACCCACGAGGATACGGGAT+GGG | + | chr6_3:16938450-16938469 | Msa0942300:intron | 55.0% | |
| TTTATACAACGGGGCGGGGA+CGG | + | chr6_3:16938486-16938505 | Msa0942300:intron | 55.0% | |
| TACAAACCCGTGCTTCGCAC+GGG | - | chr6_3:16939009-16939028 | None:intergenic | 55.0% | |
| !! | TGGGAAATGGAGGTAGTGGG+TGG | - | chr6_3:16939255-16939274 | None:intergenic | 55.0% |
| CGTGACCTCATTGGTCGCGA+AGG | + | chr6_3:16932631-16932650 | Msa0942300:CDS | 60.0% | |
| AAGGGCCTTCGCGACCAATG+AGG | - | chr6_3:16932639-16932658 | None:intergenic | 60.0% | |
| TGGTCGCGAAGGCCCTTTCT+TGG | + | chr6_3:16932642-16932661 | Msa0942300:CDS | 60.0% | |
| CGACAGCCAGTGGCCATAGA+AGG | - | chr6_3:16932702-16932721 | None:intergenic | 60.0% | |
| ! | CTATGGCCACTGGCTGTCGT+CGG | + | chr6_3:16932703-16932722 | Msa0942300:CDS | 60.0% |
| !! | ATCTTTCTCGGTGCTCGGGC+TGG | + | chr6_3:16932754-16932773 | Msa0942300:CDS | 60.0% |
| ATCCGTCACGGGTATGGAGC+GGG | + | chr6_3:16936909-16936928 | Msa0942300:intron | 60.0% | |
| TACCCGCTCCATACCCGTGA+CGG | - | chr6_3:16936914-16936933 | None:intergenic | 60.0% | |
| CCTTCGTGAATTCCCCCTCC+AGG | - | chr6_3:16937544-16937563 | None:intergenic | 60.0% | |
| CCTGGAGGGGGAATTCACGA+AGG | + | chr6_3:16937541-16937560 | Msa0942300:intron | 60.0% | |
| AGGGAGTTCCATCTCCCTGC+TGG | + | chr6_3:16937652-16937671 | Msa0942300:intron | 60.0% | |
| CAGGTACGTGGCAAGCGAGT+TGG | + | chr6_3:16938002-16938021 | Msa0942300:intron | 60.0% | |
| !! | CCGTATAGTGGGTACCCACG+AGG | + | chr6_3:16938438-16938457 | Msa0942300:intron | 60.0% |
| GTGGGTACCCACGAGGATAC+GGG | + | chr6_3:16938445-16938464 | Msa0942300:intron | 60.0% | |
| GTACCCACGAGGATACGGGA+TGG | + | chr6_3:16938449-16938468 | Msa0942300:intron | 60.0% | |
| TGCCCATCCCGTATCCTCGT+GGG | - | chr6_3:16938455-16938474 | None:intergenic | 60.0% | |
| ACGAGGATACGGGATGGGCA+CGG | + | chr6_3:16938455-16938474 | Msa0942300:intron | 60.0% | |
| TTATACAACGGGGCGGGGAC+GGG | + | chr6_3:16938487-16938506 | Msa0942300:intron | 60.0% | |
| ACTGAACCCCGTGCGAAGCA+CGG | + | chr6_3:16938999-16939018 | Msa0942300:intron | 60.0% | |
| ACAAACCCGTGCTTCGCACG+GGG | - | chr6_3:16939008-16939027 | None:intergenic | 60.0% | |
| ! | AATGCGCCGACGACAGCCAG+TGG | - | chr6_3:16932712-16932731 | None:intergenic | 65.0% |
| GGCTGTCGTCGGCGCATTTC+TGG | + | chr6_3:16932714-16932733 | Msa0942300:CDS | 65.0% | |
| CCACGGGTACCCGTGGACAT+GGG | - | chr6_3:16936884-16936903 | None:intergenic | 65.0% | |
| CCATGTCCACGGGTACCCGT+GGG | + | chr6_3:16936882-16936901 | Msa0942300:intron | 65.0% | |
| GTGCCCATCCCGTATCCTCG+TGG | - | chr6_3:16938456-16938475 | None:intergenic | 65.0% | |
| CGAGGATACGGGATGGGCAC+GGG | + | chr6_3:16938456-16938475 | Msa0942300:intron | 65.0% | |
| CTGAACCCCGTGCGAAGCAC+GGG | + | chr6_3:16939000-16939019 | Msa0942300:intron | 65.0% | |
| CCCATGTCCACGGGTACCCG+TGG | + | chr6_3:16936881-16936900 | Msa0942300:intron | 70.0% | |
| CCCACGGGTACCCGTGGACA+TGG | - | chr6_3:16936885-16936904 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 16929323 | 16940077 | 16929323 | ID=Msa0942300;Name=Msa0942300 |
| chr6_3 | mRNA | 16929323 | 16940077 | 16929323 | ID=Msa0942300-mRNA-1;Parent=Msa0942300;Name=Msa0942300-mRNA-1;_AED=0.19;_eAED=0.19;_QI=160|0.9|0.90|1|0.8|0.63|11|272|573 |
| chr6_3 | exon | 16929323 | 16929576 | 16929323 | ID=Msa0942300-mRNA-1:exon:5101;Parent=Msa0942300-mRNA-1 |
| chr6_3 | exon | 16931512 | 16931620 | 16931512 | ID=Msa0942300-mRNA-1:exon:5102;Parent=Msa0942300-mRNA-1 |
| chr6_3 | exon | 16931707 | 16931902 | 16931707 | ID=Msa0942300-mRNA-1:exon:5103;Parent=Msa0942300-mRNA-1 |
| chr6_3 | exon | 16932275 | 16932411 | 16932275 | ID=Msa0942300-mRNA-1:exon:5104;Parent=Msa0942300-mRNA-1 |
| chr6_3 | exon | 16932504 | 16932792 | 16932504 | ID=Msa0942300-mRNA-1:exon:5105;Parent=Msa0942300-mRNA-1 |
| chr6_3 | exon | 16932915 | 16933021 | 16932915 | ID=Msa0942300-mRNA-1:exon:5106;Parent=Msa0942300-mRNA-1 |
| chr6_3 | exon | 16933129 | 16933270 | 16933129 | ID=Msa0942300-mRNA-1:exon:5107;Parent=Msa0942300-mRNA-1 |
| chr6_3 | exon | 16933534 | 16933708 | 16933534 | ID=Msa0942300-mRNA-1:exon:5108;Parent=Msa0942300-mRNA-1 |
| chr6_3 | exon | 16933823 | 16934063 | 16933823 | ID=Msa0942300-mRNA-1:exon:5109;Parent=Msa0942300-mRNA-1 |
| chr6_3 | exon | 16934264 | 16934599 | 16934264 | ID=Msa0942300-mRNA-1:exon:5110;Parent=Msa0942300-mRNA-1 |
| chr6_3 | exon | 16939910 | 16940077 | 16939910 | ID=Msa0942300-mRNA-1:exon:5111;Parent=Msa0942300-mRNA-1 |
| chr6_3 | five_prime_UTR | 16929323 | 16929482 | 16929323 | ID=Msa0942300-mRNA-1:five_prime_utr;Parent=Msa0942300-mRNA-1 |
| chr6_3 | CDS | 16929483 | 16929576 | 16929483 | ID=Msa0942300-mRNA-1:cds;Parent=Msa0942300-mRNA-1 |
| chr6_3 | CDS | 16931512 | 16931620 | 16931512 | ID=Msa0942300-mRNA-1:cds;Parent=Msa0942300-mRNA-1 |
| chr6_3 | CDS | 16931707 | 16931902 | 16931707 | ID=Msa0942300-mRNA-1:cds;Parent=Msa0942300-mRNA-1 |
| chr6_3 | CDS | 16932275 | 16932411 | 16932275 | ID=Msa0942300-mRNA-1:cds;Parent=Msa0942300-mRNA-1 |
| chr6_3 | CDS | 16932504 | 16932792 | 16932504 | ID=Msa0942300-mRNA-1:cds;Parent=Msa0942300-mRNA-1 |
| chr6_3 | CDS | 16932915 | 16933021 | 16932915 | ID=Msa0942300-mRNA-1:cds;Parent=Msa0942300-mRNA-1 |
| chr6_3 | CDS | 16933129 | 16933270 | 16933129 | ID=Msa0942300-mRNA-1:cds;Parent=Msa0942300-mRNA-1 |
| chr6_3 | CDS | 16933534 | 16933708 | 16933534 | ID=Msa0942300-mRNA-1:cds;Parent=Msa0942300-mRNA-1 |
| chr6_3 | CDS | 16933823 | 16934063 | 16933823 | ID=Msa0942300-mRNA-1:cds;Parent=Msa0942300-mRNA-1 |
| chr6_3 | CDS | 16934264 | 16934495 | 16934264 | ID=Msa0942300-mRNA-1:cds;Parent=Msa0942300-mRNA-1 |
| chr6_3 | three_prime_UTR | 16934496 | 16934599 | 16934496 | ID=Msa0942300-mRNA-1:three_prime_utr;Parent=Msa0942300-mRNA-1 |
| chr6_3 | three_prime_UTR | 16939910 | 16940077 | 16939910 | ID=Msa0942300-mRNA-1:three_prime_utr;Parent=Msa0942300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
