Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038110 | XP_013450562.1 | 92.243 | 593 | 18 | 3 | 11 | 603 | 1 | 565 | 0.0 | 1126 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038110 | A0A072UFM7 | 92.243 | 593 | 18 | 3 | 11 | 603 | 1 | 565 | 0.0 | 1126 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005630 | Msa1038110 | 0.826951 | 2.046741e-54 | -8.615850e-47 |
| Msa0021980 | Msa1038110 | 0.871089 | 8.911608e-67 | -8.615850e-47 |
| Msa0025690 | Msa1038110 | 0.803358 | 3.620790e-49 | -8.615850e-47 |
| Msa0041780 | Msa1038110 | 0.845346 | 4.300213e-59 | -8.615850e-47 |
| Msa0053480 | Msa1038110 | 0.801329 | 9.476736e-49 | -8.615850e-47 |
| Msa0085580 | Msa1038110 | 0.808097 | 3.662110e-50 | -8.615850e-47 |
| Msa0090350 | Msa1038110 | 0.832171 | 1.100642e-55 | -8.615850e-47 |
| Msa0096570 | Msa1038110 | 0.821345 | 4.242618e-53 | -8.615850e-47 |
| Msa0099090 | Msa1038110 | 0.812226 | 4.715636e-51 | -8.615850e-47 |
| Msa0117300 | Msa1038110 | 0.841944 | 3.493475e-58 | -8.615850e-47 |
| Msa0608940 | Msa1038110 | 0.841812 | 3.786019e-58 | -8.615850e-47 |
| Msa0623360 | Msa1038110 | 0.826235 | 3.032335e-54 | -8.615850e-47 |
| Msa0630850 | Msa1038110 | 0.815710 | 8.041344e-52 | -8.615850e-47 |
| Msa0646180 | Msa1038110 | 0.803858 | 2.852321e-49 | -8.615850e-47 |
| Msa0648200 | Msa1038110 | 0.810443 | 1.149962e-50 | -8.615850e-47 |
| Msa0649530 | Msa1038110 | 0.852703 | 3.879680e-61 | -8.615850e-47 |
| Msa0659020 | Msa1038110 | 0.811262 | 7.646374e-51 | -8.615850e-47 |
| Msa0681880 | Msa1038110 | 0.821461 | 3.989234e-53 | -8.615850e-47 |
| Msa0691740 | Msa1038110 | 0.850064 | 2.161534e-60 | -8.615850e-47 |
| Msa0697600 | Msa1038110 | 0.814078 | 1.849842e-51 | -8.615850e-47 |
| Msa0705130 | Msa1038110 | 0.811513 | 6.741616e-51 | -8.615850e-47 |
| Msa0712910 | Msa1038110 | 0.802159 | 6.402017e-49 | -8.615850e-47 |
| Msa0714060 | Msa1038110 | 0.842140 | 3.101903e-58 | -8.615850e-47 |
| Msa0714200 | Msa1038110 | 0.836863 | 7.293005e-57 | -8.615850e-47 |
| Msa0734190 | Msa1038110 | 0.805937 | 1.048626e-49 | -8.615850e-47 |
| Msa0756440 | Msa1038110 | 0.841795 | 3.826818e-58 | -8.615850e-47 |
| Msa0775420 | Msa1038110 | 0.833615 | 4.817732e-56 | -8.615850e-47 |
| Msa0796460 | Msa1038110 | 0.837171 | 6.085173e-57 | -8.615850e-47 |
| Msa0812800 | Msa1038110 | 0.826055 | 3.346252e-54 | -8.615850e-47 |
| Msa0834200 | Msa1038110 | 0.860443 | 2.057823e-63 | -8.615850e-47 |
| Msa0834240 | Msa1038110 | 0.862919 | 3.601518e-64 | -8.615850e-47 |
| Msa0835550 | Msa1038110 | 0.856801 | 2.516255e-62 | -8.615850e-47 |
| Msa0836510 | Msa1038110 | 0.800109 | 1.681597e-48 | -8.615850e-47 |
| Msa0121460 | Msa1038110 | 0.802638 | 5.101803e-49 | -8.615850e-47 |
| Msa0131090 | Msa1038110 | 0.826029 | 3.394348e-54 | -8.615850e-47 |
| Msa0143280 | Msa1038110 | 0.805929 | 1.052815e-49 | -8.615850e-47 |
| Msa0154720 | Msa1038110 | 0.800464 | 1.423410e-48 | -8.615850e-47 |
| Msa0160650 | Msa1038110 | 0.858483 | 7.988466e-63 | -8.615850e-47 |
| Msa0184030 | Msa1038110 | 0.831162 | 1.951364e-55 | -8.615850e-47 |
| Msa0184330 | Msa1038110 | 0.802438 | 5.610610e-49 | -8.615850e-47 |
| Msa0188500 | Msa1038110 | 0.824656 | 7.172319e-54 | -8.615850e-47 |
| Msa0223190 | Msa1038110 | 0.836262 | 1.037490e-56 | -8.615850e-47 |
| Msa0225880 | Msa1038110 | 0.841923 | 3.539236e-58 | -8.615850e-47 |
| Msa0372990 | Msa1038110 | 0.814475 | 1.511836e-51 | -8.615850e-47 |
| Msa0373110 | Msa1038110 | 0.846353 | 2.291676e-59 | -8.615850e-47 |
| Msa0378670 | Msa1038110 | 0.825531 | 4.455172e-54 | -8.615850e-47 |
| Msa0378700 | Msa1038110 | 0.823937 | 1.058524e-53 | -8.615850e-47 |
| Msa0387740 | Msa1038110 | 0.805455 | 1.323673e-49 | -8.615850e-47 |
| Msa0401570 | Msa1038110 | 0.802763 | 4.808318e-49 | -8.615850e-47 |
| Msa0421390 | Msa1038110 | 0.816665 | 4.918945e-52 | -8.615850e-47 |
| Msa0421480 | Msa1038110 | 0.818474 | 1.923186e-52 | -8.615850e-47 |
| Msa0428330 | Msa1038110 | 0.816870 | 4.425008e-52 | -8.615850e-47 |
| Msa0431940 | Msa1038110 | 0.824583 | 7.462174e-54 | -8.615850e-47 |
| Msa0436590 | Msa1038110 | 0.807482 | 4.946929e-50 | -8.615850e-47 |
| Msa0436600 | Msa1038110 | 0.845765 | 3.310619e-59 | -8.615850e-47 |
| Msa0436610 | Msa1038110 | 0.816809 | 4.566182e-52 | -8.615850e-47 |
| Msa0454940 | Msa1038110 | 0.802686 | 4.987117e-49 | -8.615850e-47 |
| Msa0467480 | Msa1038110 | 0.808644 | 2.798238e-50 | -8.615850e-47 |
| Msa0475730 | Msa1038110 | 0.812210 | 4.754588e-51 | -8.615850e-47 |
| Msa0984860 | Msa1038110 | 0.807737 | 4.368097e-50 | -8.615850e-47 |
| Msa0995220 | Msa1038110 | 0.809280 | 2.045908e-50 | -8.615850e-47 |
| Msa0995660 | Msa1038110 | 0.811182 | 7.956704e-51 | -8.615850e-47 |
| Msa0998940 | Msa1038110 | 0.815048 | 1.128562e-51 | -8.615850e-47 |
| Msa0999590 | Msa1038110 | 0.847272 | 1.284401e-59 | -8.615850e-47 |
| Msa1031530 | Msa1038110 | 0.825465 | 4.620150e-54 | -8.615850e-47 |
| Msa1035040 | Msa1038110 | -0.800021 | 1.752235e-48 | -8.615850e-47 |
| Msa1038110 | Msa1053990 | -0.803484 | 3.409612e-49 | -8.615850e-47 |
| Msa1038110 | Msa1071310 | 0.819303 | 1.246537e-52 | -8.615850e-47 |
| Msa1038110 | Msa1071460 | 0.839852 | 1.236214e-57 | -8.615850e-47 |
| Msa1038110 | Msa1101610 | 0.816632 | 5.003787e-52 | -8.615850e-47 |
| Msa1038110 | Msa1125450 | 0.813705 | 2.235897e-51 | -8.615850e-47 |
| Msa1038110 | Msa1129660 | 0.962364 | 8.658590e-121 | -8.615850e-47 |
| Msa1038110 | Msa1158650 | 0.809265 | 2.060636e-50 | -8.615850e-47 |
| Msa1038110 | Msa1164570 | 0.808226 | 3.436357e-50 | -8.615850e-47 |
| Msa1038110 | Msa1166170 | 0.816259 | 6.063885e-52 | -8.615850e-47 |
| Msa1038110 | Msa1166270 | 0.818924 | 1.520440e-52 | -8.615850e-47 |
| Msa1038110 | Msa1182400 | 0.827025 | 1.964688e-54 | -8.615850e-47 |
| Msa1038110 | Msa1186010 | 0.801044 | 1.084297e-48 | -8.615850e-47 |
| Msa1038110 | Msa1194170 | -0.845985 | 2.885845e-59 | -8.615850e-47 |
| Msa1038110 | Msa1199580 | 0.830531 | 2.786453e-55 | -8.615850e-47 |
| Msa1038110 | Msa1199750 | 0.801325 | 9.498384e-49 | -8.615850e-47 |
| Msa1038110 | Msa1204390 | 0.802944 | 4.410968e-49 | -8.615850e-47 |
| Msa1038110 | Msa1216700 | 0.817360 | 3.433979e-52 | -8.615850e-47 |
| Msa1038110 | Msa1228330 | 0.801370 | 9.298872e-49 | -8.615850e-47 |
| Msa1038110 | Msa1230190 | 0.831434 | 1.672776e-55 | -8.615850e-47 |
| Msa1038110 | Msa1240060 | -0.809413 | 1.915992e-50 | -8.615850e-47 |
| Msa1038110 | Msa1263610 | 0.825929 | 3.585412e-54 | -8.615850e-47 |
| Msa1038110 | Msa1272770 | 0.817623 | 2.995642e-52 | -8.615850e-47 |
| Msa1038110 | Msa1281370 | -0.801881 | 7.303521e-49 | -8.615850e-47 |
| Msa1038110 | Msa1295220 | 0.800358 | 1.496368e-48 | -8.615850e-47 |
| Msa1038110 | Msa1296610 | 0.803136 | 4.026719e-49 | -8.615850e-47 |
| Msa1038110 | Msa1299280 | -0.822202 | 2.686626e-53 | -8.615850e-47 |
| Msa1038110 | Msa1320530 | -0.817860 | 2.648892e-52 | -8.615850e-47 |
| Msa1038110 | Msa1325850 | 0.816877 | 4.407761e-52 | -8.615850e-47 |
| Msa1038110 | Msa1328600 | 0.802943 | 4.412251e-49 | -8.615850e-47 |
| Msa1038110 | Msa1328630 | 0.822095 | 2.844673e-53 | -8.615850e-47 |
| Msa1038110 | Msa1328720 | 0.825740 | 3.974667e-54 | -8.615850e-47 |
| Msa1038110 | Msa1329020 | 0.807508 | 4.883776e-50 | -8.615850e-47 |
| Msa1038110 | Msa1329660 | 0.826370 | 2.815232e-54 | -8.615850e-47 |
| Msa1038110 | Msa1339310 | 0.829521 | 4.913511e-55 | -8.615850e-47 |
| Msa1038110 | Msa1346920 | 0.802211 | 6.247297e-49 | -8.615850e-47 |
| Msa1038110 | Msa1353280 | 0.853175 | 2.843568e-61 | -8.615850e-47 |
| Msa1038110 | Msa1359880 | 0.802894 | 4.517342e-49 | -8.615850e-47 |
| Msa1038110 | Msa1368660 | 0.823964 | 1.042802e-53 | -8.615850e-47 |
| Msa1038110 | Msa1370630 | 0.828288 | 9.770417e-55 | -8.615850e-47 |
| Msa1038110 | Msa1381720 | 0.844278 | 8.345721e-59 | -8.615850e-47 |
| Msa1038110 | Msa1386250 | 0.800341 | 1.508411e-48 | -8.615850e-47 |
| Msa1038110 | Msa1388270 | 0.838800 | 2.319284e-57 | -8.615850e-47 |
| Msa1038110 | Msa1398310 | 0.803934 | 2.750291e-49 | -8.615850e-47 |
| Msa1038110 | Msa1399700 | 0.807744 | 4.352555e-50 | -8.615850e-47 |
| Msa1038110 | Msa1401000 | 0.963905 | 1.162615e-122 | -8.615850e-47 |
| Msa1038110 | Msa1410180 | 0.802102 | 6.580114e-49 | -8.615850e-47 |
| Msa1038110 | Msa1419230 | 0.821648 | 3.610224e-53 | -8.615850e-47 |
| Msa1038110 | Msa1427180 | 0.843494 | 1.354103e-58 | -8.615850e-47 |
| Msa1038110 | Msa1431180 | 0.836247 | 1.046707e-56 | -8.615850e-47 |
| Msa1038110 | Msa1432250 | 0.832687 | 8.198023e-56 | -8.615850e-47 |
| Msa1038110 | Msa1433380 | 0.828917 | 6.887382e-55 | -8.615850e-47 |
| Msa1038110 | Msa1442070 | 0.817214 | 3.703951e-52 | -8.615850e-47 |
| Msa1038110 | Msa1446220 | 0.811653 | 6.286005e-51 | -8.615850e-47 |
| Msa1038110 | Msa1450630 | 0.801699 | 7.962003e-49 | -8.615850e-47 |
| Msa1038110 | Msa1450850 | 0.828175 | 1.040487e-54 | -8.615850e-47 |
| Msa1038110 | Msa1457450 | 0.802545 | 5.332669e-49 | -8.615850e-47 |
| Msa1038110 | Msa1459630 | 0.830314 | 3.148508e-55 | -8.615850e-47 |
| Msa0256410 | Msa1038110 | 0.825059 | 5.760651e-54 | -8.615850e-47 |
| Msa0260470 | Msa1038110 | 0.841108 | 5.802429e-58 | -8.615850e-47 |
| Msa0264240 | Msa1038110 | 0.801847 | 7.420656e-49 | -8.615850e-47 |
| Msa0264420 | Msa1038110 | 0.854932 | 8.853178e-62 | -8.615850e-47 |
| Msa0302310 | Msa1038110 | 0.858218 | 9.580377e-63 | -8.615850e-47 |
| Msa0304110 | Msa1038110 | 0.832720 | 8.046024e-56 | -8.615850e-47 |
| Msa0339560 | Msa1038110 | 0.816426 | 5.563290e-52 | -8.615850e-47 |
| Msa0339670 | Msa1038110 | 0.850465 | 1.669011e-60 | -8.615850e-47 |
| Msa0341190 | Msa1038110 | 0.832218 | 1.071812e-55 | -8.615850e-47 |
| Msa0341520 | Msa1038110 | 0.809445 | 1.885237e-50 | -8.615850e-47 |
| Msa0343200 | Msa1038110 | 0.805855 | 1.091033e-49 | -8.615850e-47 |
| Msa0364010 | Msa1038110 | 0.804864 | 1.760401e-49 | -8.615850e-47 |
| Msa0484250 | Msa1038110 | 0.808398 | 3.159217e-50 | -8.615850e-47 |
| Msa0496460 | Msa1038110 | 0.819263 | 1.273168e-52 | -8.615850e-47 |
| Msa0496470 | Msa1038110 | 0.833981 | 3.902246e-56 | -8.615850e-47 |
| Msa0520810 | Msa1038110 | 0.834876 | 2.325342e-56 | -8.615850e-47 |
| Msa0525940 | Msa1038110 | 0.806535 | 7.847971e-50 | -8.615850e-47 |
| Msa0546370 | Msa1038110 | 0.833225 | 6.025623e-56 | -8.615850e-47 |
| Msa0555510 | Msa1038110 | 0.841612 | 4.275799e-58 | -8.615850e-47 |
| Msa0560370 | Msa1038110 | 0.841920 | 3.545397e-58 | -8.615850e-47 |
| Msa0568490 | Msa1038110 | 0.804081 | 2.562950e-49 | -8.615850e-47 |
| Msa0579170 | Msa1038110 | 0.804782 | 1.831403e-49 | -8.615850e-47 |
| Msa0579230 | Msa1038110 | 0.806413 | 8.327696e-50 | -8.615850e-47 |
| Msa0595470 | Msa1038110 | 0.802168 | 6.375336e-49 | -8.615850e-47 |
| Msa0846300 | Msa1038110 | 0.836801 | 7.563459e-57 | -8.615850e-47 |
| Msa0853150 | Msa1038110 | 0.829494 | 4.989939e-55 | -8.615850e-47 |
| Msa0861480 | Msa1038110 | 0.830059 | 3.634443e-55 | -8.615850e-47 |
| Msa0861560 | Msa1038110 | 0.814750 | 1.313948e-51 | -8.615850e-47 |
| Msa0871310 | Msa1038110 | 0.864226 | 1.416053e-64 | -8.615850e-47 |
| Msa0899080 | Msa1038110 | 0.802574 | 5.258534e-49 | -8.615850e-47 |
| Msa0899730 | Msa1038110 | 0.800513 | 1.391145e-48 | -8.615850e-47 |
| Msa0927890 | Msa1038110 | 0.826048 | 3.358292e-54 | -8.615850e-47 |
| Msa0942300 | Msa1038110 | 0.836946 | 6.944538e-57 | -8.615850e-47 |
| Msa0967250 | Msa1038110 | 0.818893 | 1.545348e-52 | -8.615850e-47 |
| Msa0967260 | Msa1038110 | 0.821998 | 2.996019e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038110 | MtrunA17_Chr1g0190291 | 68.954 | 612 | 143 | 7 | 11 | 603 | 1 | 584 | 0.0 | 854 |
| Msa1038110 | MtrunA17_Chr7g0274501 | 93.293 | 328 | 15 | 2 | 11 | 338 | 1 | 321 | 0.0 | 629 |
| Msa1038110 | MtrunA17_Chr7g0274511 | 90.602 | 266 | 3 | 1 | 338 | 603 | 4 | 247 | 7.12e-177 | 500 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038110 | AT5G28910.2 | 58.603 | 587 | 189 | 8 | 18 | 603 | 2 | 535 | 0.0 | 685 |
| Msa1038110 | AT5G28960.1 | 55.877 | 587 | 206 | 7 | 18 | 603 | 2 | 536 | 0.0 | 648 |
| Msa1038110 | AT5G28910.1 | 66.832 | 404 | 107 | 4 | 200 | 603 | 32 | 408 | 0.0 | 574 |
Find 134 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTATTGTTTCTTTGATTT+TGG | 0.061596 | 7_1:-74919321 | Msa1038110:CDS |
| TTCTATTTCTTTAGGTTTAA+AGG | 0.141301 | 7_1:+74918157 | None:intergenic |
| GTAGTAGACCTTTGATTTAA+TGG | 0.224978 | 7_1:+74919434 | None:intergenic |
| GTTAATCTTTCTATTTCTTT+AGG | 0.231940 | 7_1:+74918149 | None:intergenic |
| ATTATACGTCGAAGCATATA+TGG | 0.264313 | 7_1:-74916941 | Msa1038110:CDS |
| ACTTGGTGCTTCCTTATAGA+TGG | 0.275894 | 7_1:-74915215 | Msa1038110:CDS |
| ACCAAATGTTATTGAGGTTT+GGG | 0.282915 | 7_1:+74915535 | None:intergenic |
| ACATTATCTATCACTCTATT+AGG | 0.287865 | 7_1:-74915119 | Msa1038110:three_prime_UTR |
| AACCAAATGTTATTGAGGTT+TGG | 0.296113 | 7_1:+74915534 | None:intergenic |
| CTGAGAGAAGTAAGTGCTTA+TGG | 0.301437 | 7_1:-74918037 | Msa1038110:CDS |
| ATCTCTCCCAGTCAGCTAAA+AGG | 0.322499 | 7_1:+74917308 | None:intergenic |
| TGGGACCCAGGGCTTGTGAT+TGG | 0.323573 | 7_1:+74915665 | None:intergenic |
| TTGTCACTAACTTCTACAAT+AGG | 0.327883 | 7_1:-74917207 | Msa1038110:CDS |
| TATTTCTCATTCCATCTATA+AGG | 0.328056 | 7_1:+74915204 | None:intergenic |
| CTTGCCTAATGCTCCACATT+TGG | 0.333008 | 7_1:-74917991 | Msa1038110:CDS |
| GGCATTGGAGCTCAAATTGC+TGG | 0.341476 | 7_1:-74917274 | Msa1038110:CDS |
| TGTCTTACACAAAGTGCTTA+TGG | 0.342584 | 7_1:-74919916 | Msa1038110:five_prime_UTR |
| CCACTTAGAAGAATACTCTT+TGG | 0.345267 | 7_1:+74915394 | None:intergenic |
| CACAAGACTTCCGTTTATAT+CGG | 0.347880 | 7_1:+74916742 | None:intergenic |
| TGGGAGAGATTACCTGGATT+TGG | 0.353736 | 7_1:-74917295 | Msa1038110:CDS |
| TGCAGCTTGCTGATAGAATT+AGG | 0.358510 | 7_1:-74915566 | Msa1038110:CDS |
| CAAAGGTAAGAAGGCAAGAT+AGG | 0.362541 | 7_1:-74915358 | Msa1038110:CDS |
| GCGTCAACAAGGACAGATTT+TGG | 0.366429 | 7_1:-74915151 | Msa1038110:CDS |
| TCCCAAACCTCAATAACATT+TGG | 0.374339 | 7_1:-74915536 | Msa1038110:CDS |
| TTCGGGTCGCTACAGTTTGA+TGG | 0.388599 | 7_1:+74917340 | None:intergenic |
| CTCTTCTAAGCATGCATGTA+AGG | 0.389151 | 7_1:-74915638 | Msa1038110:CDS |
| GAGGAGCGCCATGCTGCCTT+TGG | 0.390042 | 7_1:-74916427 | Msa1038110:CDS |
| ATATATATTGACATGAATAT+AGG | 0.401990 | 7_1:+74919535 | None:intergenic |
| TTGGCTATTCTTGGTAACTT+TGG | 0.403485 | 7_1:-74919302 | Msa1038110:CDS |
| ATAGATGGAATGAGAAATAC+TGG | 0.404491 | 7_1:-74915200 | Msa1038110:CDS |
| GGCTGAGTATGAAGCTAGCC+TGG | 0.415295 | 7_1:-74915321 | Msa1038110:CDS |
| TATCTTTGCTTTACTCAGCT+TGG | 0.415647 | 7_1:-74918085 | Msa1038110:CDS |
| GAAAAGTTCAACGCGACATA+TGG | 0.418048 | 7_1:-74917375 | Msa1038110:CDS |
| CTTCCGTTTATATCGGTTGT+TGG | 0.424746 | 7_1:+74916749 | None:intergenic |
| CTTGCTATTGCAATCAATGA+AGG | 0.433637 | 7_1:-74917238 | Msa1038110:CDS |
| GCATAGAAAAGTGAGCAAAC+TGG | 0.436313 | 7_1:+74919273 | None:intergenic |
| AATTTATCAATATCAGACTT+TGG | 0.436340 | 7_1:+74915696 | None:intergenic |
| TGCATGCTTAGAAGAGGTCT+TGG | 0.446515 | 7_1:+74915645 | None:intergenic |
| TCCAACGTGCGACATTTAGC+TGG | 0.446728 | 7_1:-74916152 | Msa1038110:CDS |
| TAAAGAAAAGGAGAGTGAAA+TGG | 0.447951 | 7_1:-74919459 | Msa1038110:CDS |
| TTCATTATACAAAGGTAAGA+AGG | 0.458461 | 7_1:-74915367 | Msa1038110:CDS |
| GCTAAAAGGAACTTGACATT+CGG | 0.460601 | 7_1:+74917322 | None:intergenic |
| CTGATATTGATAAATTTGTA+TGG | 0.463456 | 7_1:-74915689 | Msa1038110:CDS |
| TAGTGCTTCTCTCCCTTCCC+AGG | 0.463552 | 7_1:+74915303 | None:intergenic |
| AAGAGATTAATCAAGATGAA+AGG | 0.465185 | 7_1:-74918109 | Msa1038110:CDS |
| TATGGTCCAATCACAAGCCC+TGG | 0.466147 | 7_1:-74915671 | Msa1038110:CDS |
| AACCGTCTCGACACACGTAT+AGG | 0.466328 | 7_1:-74917939 | Msa1038110:CDS |
| TAGACAACCAAATGTTATTG+AGG | 0.467328 | 7_1:+74915529 | None:intergenic |
| CATGTTCATGCATAAAGAAA+AGG | 0.467559 | 7_1:-74919471 | Msa1038110:CDS |
| AGTAGCAATTCCAGCTAGAT+CGG | 0.470188 | 7_1:+74917060 | None:intergenic |
| GCTGACTGGGAGAGATTACC+TGG | 0.471329 | 7_1:-74917301 | Msa1038110:CDS |
| CTAAAAGGAACTTGACATTC+GGG | 0.474877 | 7_1:+74917323 | None:intergenic |
| AGATTACCTGGATTTGGCAT+TGG | 0.484786 | 7_1:-74917289 | Msa1038110:CDS |
| AGGCTGTACGTTACTTAATG+AGG | 0.485431 | 7_1:-74916483 | Msa1038110:CDS |
| TCTAAGCATGCATGTAAGGA+TGG | 0.488615 | 7_1:-74915634 | Msa1038110:CDS |
| ATGGCCCACAAGTTTCTTTG+AGG | 0.489548 | 7_1:-74919567 | Msa1038110:five_prime_UTR |
| CAACCAACAACCGATATAAA+CGG | 0.491670 | 7_1:-74916752 | Msa1038110:CDS |
| GCCACCTCAAAGAAACTTGT+GGG | 0.493147 | 7_1:+74919563 | None:intergenic |
| TGTCACTAACTTCTACAATA+GGG | 0.493395 | 7_1:-74917206 | Msa1038110:CDS |
| ACTGGTGGAAAGGTCATGTC+TGG | 0.496474 | 7_1:-74915182 | Msa1038110:CDS |
| CAGGGCTGTCCCGATCTAGC+TGG | 0.497278 | 7_1:-74917070 | Msa1038110:CDS |
| AGAGATTAATCAAGATGAAA+GGG | 0.498406 | 7_1:-74918108 | Msa1038110:CDS |
| CAATGTATGATGCAGGATAT+GGG | 0.499769 | 7_1:-74916795 | Msa1038110:intron |
| GTGAAAGCTTGCCTAGGAGT+TGG | 0.499983 | 7_1:+74916912 | None:intergenic |
| TCGACGGTGGTGGCGAGCAC+AGG | 0.504855 | 7_1:-74916699 | Msa1038110:intron |
| CCAAAGAGTATTCTTCTAAG+TGG | 0.506483 | 7_1:-74915394 | Msa1038110:CDS |
| AGTAAGTGCTTATGGAAACT+TGG | 0.512305 | 7_1:-74918029 | Msa1038110:CDS |
| GCCCACAAGTTTCTTTGAGG+TGG | 0.514528 | 7_1:-74919564 | Msa1038110:five_prime_UTR |
| TACTACTCCTCTTGAGAGAG+TGG | 0.522344 | 7_1:-74919417 | Msa1038110:CDS |
| CCTTTCCACCATGGACAAGT+AGG | 0.522455 | 7_1:-74917908 | Msa1038110:CDS |
| ATTGAGGATGCATTGAGTAA+AGG | 0.523240 | 7_1:-74916984 | Msa1038110:CDS |
| TAGAAGAGGTCTTGGGACCC+AGG | 0.525104 | 7_1:+74915653 | None:intergenic |
| TTGGAGCTTTGGGTTCAACT+TGG | 0.526444 | 7_1:-74915232 | Msa1038110:CDS |
| AGATAGGAGTAATGTTTCAA+TGG | 0.527576 | 7_1:-74915342 | Msa1038110:CDS |
| TTCCTATACGTGTGTCGAGA+CGG | 0.527916 | 7_1:+74917937 | None:intergenic |
| TGAGAGAGTGGTTTCTCAGA+GGG | 0.531048 | 7_1:-74919405 | Msa1038110:CDS |
| AAGTTGCATGTGTATTCAGT+CGG | 0.532185 | 7_1:+74916457 | None:intergenic |
| TTATACGTCGAAGCATATAT+GGG | 0.535262 | 7_1:-74916940 | Msa1038110:CDS |
| CCTACTTGTCCATGGTGGAA+AGG | 0.537449 | 7_1:+74917908 | None:intergenic |
| GGAAAATAACTTACTGATGG+TGG | 0.537841 | 7_1:+74919220 | None:intergenic |
| GGCTGATCATGATGGCTGCA+AGG | 0.539239 | 7_1:-74917185 | Msa1038110:CDS |
| TTGGTTGTCTACAGAGATGC+AGG | 0.539391 | 7_1:-74915517 | Msa1038110:intron |
| GTAGCAATTCCAGCTAGATC+GGG | 0.539518 | 7_1:+74917061 | None:intergenic |
| TATGGGCAGGACCAACTCCT+AGG | 0.541882 | 7_1:-74916923 | Msa1038110:intron |
| AGTTGCATGTGTATTCAGTC+GGG | 0.544098 | 7_1:+74916458 | None:intergenic |
| AGAATGTCGCCAACGTGCGT+TGG | 0.549164 | 7_1:-74917018 | Msa1038110:CDS |
| GCTGATCATGATGGCTGCAA+GGG | 0.549566 | 7_1:-74917184 | Msa1038110:intron |
| TACAATAGGGCTGATCATGA+TGG | 0.551411 | 7_1:-74917193 | Msa1038110:CDS |
| GCATGCTTAGAAGAGGTCTT+GGG | 0.551947 | 7_1:+74915646 | None:intergenic |
| CACATGCAACTTATTGAATG+AGG | 0.554044 | 7_1:-74916446 | Msa1038110:CDS |
| GCCATAAGAAAATTAACAAG+TGG | 0.555432 | 7_1:+74915275 | None:intergenic |
| ACGTCGAAGCATATATGGGC+AGG | 0.555903 | 7_1:-74916936 | Msa1038110:CDS |
| TGCCACCTCAAAGAAACTTG+TGG | 0.556895 | 7_1:+74919562 | None:intergenic |
| AAATGGAGCCATTAAATCAA+AGG | 0.561729 | 7_1:-74919442 | Msa1038110:CDS |
| TGAGCTCCAATGCCAAATCC+AGG | 0.562206 | 7_1:+74917283 | None:intergenic |
| ATGTGGAGCATTAGGCAAGT+TGG | 0.563992 | 7_1:+74917995 | None:intergenic |
| AATCCTTTCCTACTTGTCCA+TGG | 0.564954 | 7_1:+74917900 | None:intergenic |
| AGTATGAAGCTAGCCTGGGA+AGG | 0.565186 | 7_1:-74915316 | Msa1038110:CDS |
| CGATATAAACGGAAGTCTTG+TGG | 0.565369 | 7_1:-74916741 | Msa1038110:CDS |
| GCAGGATATGGGGCGATCCG+TGG | 0.570632 | 7_1:-74916784 | Msa1038110:intron |
| GTTGGTTGCAAATAATTCCA+CGG | 0.574159 | 7_1:+74916767 | None:intergenic |
| GCTCAAATTGCTGGAATGTG+TGG | 0.578209 | 7_1:-74917265 | Msa1038110:CDS |
| CTAAGCATGCATGTAAGGAT+GGG | 0.579310 | 7_1:-74915633 | Msa1038110:CDS |
| AATGAGAAATACTGGTGGAA+AGG | 0.580618 | 7_1:-74915192 | Msa1038110:CDS |
| CTGAGGGTAATCATCCACCC+TGG | 0.583025 | 7_1:-74917851 | Msa1038110:CDS |
| AGAAGAGGTCTTGGGACCCA+GGG | 0.585539 | 7_1:+74915654 | None:intergenic |
| GAGATGCCTCAGGAGGAGAA+TGG | 0.586610 | 7_1:-74915726 | Msa1038110:intron |
| TGAGAAACCACTCTCTCAAG+AGG | 0.586656 | 7_1:+74919410 | None:intergenic |
| GTATGAAGCTAGCCTGGGAA+GGG | 0.593330 | 7_1:-74915315 | Msa1038110:CDS |
| CTTACATGCATGCTTAGAAG+AGG | 0.593796 | 7_1:+74915639 | None:intergenic |
| GCTGAGTATGAAGCTAGCCT+GGG | 0.604368 | 7_1:-74915320 | Msa1038110:CDS |
| CCACCATGGACAAGTAGGAA+AGG | 0.607649 | 7_1:-74917903 | Msa1038110:CDS |
| TACCCTCAGATACAGCAAGA+GGG | 0.609496 | 7_1:+74917865 | None:intergenic |
| GTGGAACTTTCATTATACAA+AGG | 0.609760 | 7_1:-74915375 | Msa1038110:CDS |
| TGAGGGTAATCATCCACCCT+GGG | 0.609901 | 7_1:-74917850 | Msa1038110:intron |
| ATGGTCCAATCACAAGCCCT+GGG | 0.610228 | 7_1:-74915670 | Msa1038110:CDS |
| GAAATGATTCCTTTCCACCA+TGG | 0.616729 | 7_1:-74917917 | Msa1038110:CDS |
| CCTTTCCTACTTGTCCATGG+TGG | 0.617827 | 7_1:+74917903 | None:intergenic |
| TGGCTACTTGAGCGTCAACA+AGG | 0.630833 | 7_1:-74915162 | Msa1038110:CDS |
| TTGAGAGAGTGGTTTCTCAG+AGG | 0.632133 | 7_1:-74919406 | Msa1038110:CDS |
| TCCAGCTAAATGTCGCACGT+TGG | 0.638382 | 7_1:+74916151 | None:intergenic |
| ACCCTCAGATACAGCAAGAG+GGG | 0.639224 | 7_1:+74917866 | None:intergenic |
| GTTGGAACTCGTGAAAATTG+AGG | 0.646555 | 7_1:-74917000 | Msa1038110:CDS |
| ATTTAGCTGGAGAAGCTAGA+CGG | 0.647194 | 7_1:-74916139 | Msa1038110:CDS |
| TAAAGCATGTGAAATGAGAG+TGG | 0.647417 | 7_1:-74915607 | Msa1038110:CDS |
| GCAACAGCACATATCTGACA+TGG | 0.647774 | 7_1:+74919359 | None:intergenic |
| CCCTCAGATACAGCAAGAGG+GGG | 0.652389 | 7_1:+74917867 | None:intergenic |
| TCTTATTGGAGAATGGCCAA+AGG | 0.652636 | 7_1:-74916374 | Msa1038110:intron |
| ATTAAGAAACATACCCAGGG+TGG | 0.662468 | 7_1:+74917837 | None:intergenic |
| GATGGAATGAGAAATACTGG+TGG | 0.667101 | 7_1:-74915197 | Msa1038110:CDS |
| TTACCCTCAGATACAGCAAG+AGG | 0.671672 | 7_1:+74917864 | None:intergenic |
| AATGTATGATGCAGGATATG+GGG | 0.675541 | 7_1:-74916794 | Msa1038110:intron |
| TATTGTAGAAGTTAGTGACA+AGG | 0.707557 | 7_1:+74917209 | None:intergenic |
| TCACGAGTTCCAACGCACGT+TGG | 0.722369 | 7_1:+74917009 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACAATAATTTTTTTTTTGA+GGG | - | chr7_1:74916021-74916040 | Msa1038110:intron | 10.0% |
| !!! | AATAATTTTAAAAAAACAGT+AGG | + | chr7_1:74916319-74916338 | None:intergenic | 10.0% |
| !!! | AATTTGTTATTTAGTAATTT+TGG | - | chr7_1:74917183-74917202 | Msa1038110:intron | 10.0% |
| !! | ATATATATTGACATGAATAT+AGG | + | chr7_1:74915368-74915387 | None:intergenic | 15.0% |
| !! | AAAAGAAGAAAATCATAAAT+GGG | + | chr7_1:74915840-74915859 | None:intergenic | 15.0% |
| !!! | ATTAATTTTAGAAAAACAGT+AGG | + | chr7_1:74915915-74915934 | None:intergenic | 15.0% |
| !!! | ACTATCAATAAGTAATTTTT+TGG | + | chr7_1:74915938-74915957 | None:intergenic | 15.0% |
| !!! | GTACAATAATTTTTTTTTTG+AGG | - | chr7_1:74916020-74916039 | Msa1038110:intron | 15.0% |
| !! | AAAAGAAGAAAATAATAAAG+GGG | + | chr7_1:74916277-74916296 | None:intergenic | 15.0% |
| !! | CAAAAGAAGAAAATAATAAA+GGG | + | chr7_1:74916278-74916297 | None:intergenic | 15.0% |
| !! | ACAAAAGAAGAAAATAATAA+AGG | + | chr7_1:74916279-74916298 | None:intergenic | 15.0% |
| !!! | AGCATACTATAATTAATTTT+TGG | - | chr7_1:74916465-74916484 | Msa1038110:CDS | 15.0% |
| !!! | TTTGGATTTTGTATTTAATA+AGG | - | chr7_1:74917286-74917305 | Msa1038110:CDS | 15.0% |
| !!! | TCATTTTCTATAATCTAATA+AGG | + | chr7_1:74917447-74917466 | None:intergenic | 15.0% |
| !!! | AAATATGATGAATTTTTTAC+TGG | + | chr7_1:74919917-74919936 | None:intergenic | 15.0% |
| !!! | CAAGAATTCATTTTATTTAG+AGG | - | chr7_1:74915044-74915063 | Msa1038110:three_prime_UTR | 20.0% |
| !! | CTAGTTATTAAGAGAAAATT+GGG | - | chr7_1:74915756-74915775 | Msa1038110:intron | 20.0% |
| !! | CAAAAGAAGAAAATCATAAA+TGG | + | chr7_1:74915841-74915860 | None:intergenic | 20.0% |
| !! | CATATTATTGGATTAATGTT+AGG | + | chr7_1:74915889-74915908 | None:intergenic | 20.0% |
| !! | TACAAGATAACATTACATTA+GGG | - | chr7_1:74916513-74916532 | Msa1038110:intron | 20.0% |
| !!! | TTCTATTTCTTTAGGTTTAA+AGG | + | chr7_1:74916746-74916765 | None:intergenic | 20.0% |
| !!! | GTTAATCTTTCTATTTCTTT+AGG | + | chr7_1:74916754-74916773 | None:intergenic | 20.0% |
| !! | TGGATTAATAAACAGAAATA+AGG | + | chr7_1:74918231-74918250 | None:intergenic | 20.0% |
| !! | ATATATATGTGTATTGGATA+CGG | - | chr7_1:74918869-74918888 | Msa1038110:intron | 20.0% |
| !! | AATATCAAAGCATGTAAAAA+TGG | + | chr7_1:74919134-74919153 | None:intergenic | 20.0% |
| !! | AATTTATCAATATCAGACTT+TGG | + | chr7_1:74919207-74919226 | None:intergenic | 20.0% |
| !! | CTGATATTGATAAATTTGTA+TGG | - | chr7_1:74919211-74919230 | Msa1038110:intron | 20.0% |
| ! | AATATACATAGAACGAGAAA+AGG | + | chr7_1:74915264-74915283 | None:intergenic | 25.0% |
| !!! | TTGCATTTATTTTTTGCAGT+TGG | - | chr7_1:74915295-74915314 | Msa1038110:CDS | 25.0% |
| !!! | CTGTATTGTTTCTTTGATTT+TGG | - | chr7_1:74915579-74915598 | Msa1038110:CDS | 25.0% |
| ! | TAAGGAAAATAACTTACTGA+TGG | + | chr7_1:74915686-74915705 | None:intergenic | 25.0% |
| ! | GTAGTAAATGAAAGTGATTA+AGG | + | chr7_1:74915704-74915723 | None:intergenic | 25.0% |
| !! | CCAATTTTCTCTTAATAACT+AGG | + | chr7_1:74915758-74915777 | None:intergenic | 25.0% |
| ! | CCTAGTTATTAAGAGAAAAT+TGG | - | chr7_1:74915755-74915774 | Msa1038110:intron | 25.0% |
| ! | AACAGTAGGATTCATATTAT+TGG | + | chr7_1:74915901-74915920 | None:intergenic | 25.0% |
| ! | GATATTTAATATGAGACACA+TGG | - | chr7_1:74916130-74916149 | Msa1038110:CDS | 25.0% |
| ! | TTCTTCATATAGCAGTTAAA+AGG | + | chr7_1:74916211-74916230 | None:intergenic | 25.0% |
| ! | TGAAATACAGTTGAAACTTT+AGG | - | chr7_1:74916350-74916369 | Msa1038110:intron | 25.0% |
| ! | GAAATACAGTTGAAACTTTA+GGG | - | chr7_1:74916351-74916370 | Msa1038110:intron | 25.0% |
| !! | CTTGATGAGTATGAAATTTT+AGG | - | chr7_1:74916394-74916413 | Msa1038110:CDS | 25.0% |
| ! | CTACAAGATAACATTACATT+AGG | - | chr7_1:74916512-74916531 | Msa1038110:intron | 25.0% |
| ! | TACTATAAAAAGTTGGAAAG+TGG | + | chr7_1:74916624-74916643 | None:intergenic | 25.0% |
| ! | AAGAGATTAATCAAGATGAA+AGG | - | chr7_1:74916791-74916810 | Msa1038110:intron | 25.0% |
| ! | AGAGATTAATCAAGATGAAA+GGG | - | chr7_1:74916792-74916811 | Msa1038110:intron | 25.0% |
| !!! | TCTAATGTCTTGTTTGTTTT+AGG | - | chr7_1:74917249-74917268 | Msa1038110:CDS | 25.0% |
| ! | TAGGAAACTACTATCATATT+TGG | - | chr7_1:74917268-74917287 | Msa1038110:CDS | 25.0% |
| ! | CATTACATAATAATGCACTT+AGG | + | chr7_1:74917323-74917342 | None:intergenic | 25.0% |
| !!! | ACTGTGAAGTTTTGTTAAAA+TGG | + | chr7_1:74917778-74917797 | None:intergenic | 25.0% |
| ! | TTAATCCATGATATCATTGA+TGG | - | chr7_1:74918243-74918262 | Msa1038110:intron | 25.0% |
| ! | TATCTCATGAAACAAAACAT+TGG | + | chr7_1:74918313-74918332 | None:intergenic | 25.0% |
| ! | CATCATTAAATCACTATTCA+TGG | + | chr7_1:74918377-74918396 | None:intergenic | 25.0% |
| !! | TTGCCATAATTATCATTTTC+AGG | - | chr7_1:74918397-74918416 | Msa1038110:intron | 25.0% |
| !!! | ATGGTTCTAAAAAGTCTTAT+TGG | - | chr7_1:74918512-74918531 | Msa1038110:intron | 25.0% |
| !!! | TAAAAAGTCTTATTGGAGAA+TGG | - | chr7_1:74918519-74918538 | Msa1038110:intron | 25.0% |
| ! | ATACCAAATAGGAAAATTAG+TGG | + | chr7_1:74918560-74918579 | None:intergenic | 25.0% |
| ! | TTGTGCTTTACATCTATAAA+TGG | - | chr7_1:74918610-74918629 | Msa1038110:intron | 25.0% |
| ! | TTCATTATACAAAGGTAAGA+AGG | - | chr7_1:74919533-74919552 | Msa1038110:five_prime_UTR | 25.0% |
| !!! | TCCACTTGTTAATTTTCTTA+TGG | - | chr7_1:74919624-74919643 | Msa1038110:intron | 25.0% |
| !! | TGTTAATTTTCTTATGGCTA+CGG | - | chr7_1:74919630-74919649 | Msa1038110:intron | 25.0% |
| ! | TATTTCTCATTCCATCTATA+AGG | + | chr7_1:74919699-74919718 | None:intergenic | 25.0% |
| ! | ACATTATCTATCACTCTATT+AGG | - | chr7_1:74919781-74919800 | Msa1038110:intron | 25.0% |
| ACAAACAAAGAACAAGAAGA+AGG | + | chr7_1:74915099-74915118 | None:intergenic | 30.0% | |
| GAAGGAAAGAAAGAAATTCA+CGG | + | chr7_1:74915168-74915187 | None:intergenic | 30.0% | |
| TTCTTTCCTTCTTTCTTGTT+TGG | - | chr7_1:74915177-74915196 | Msa1038110:CDS | 30.0% | |
| TTTGCAGTTGGAAAAATCAT+AGG | - | chr7_1:74915307-74915326 | Msa1038110:CDS | 30.0% | |
| TTGCAGTTGGAAAAATCATA+GGG | - | chr7_1:74915308-74915327 | Msa1038110:CDS | 30.0% | |
| TTGGAAAAATCATAGGGATA+TGG | - | chr7_1:74915314-74915333 | Msa1038110:CDS | 30.0% | |
| ! | CTTTTCTTTATGCATGAACA+TGG | + | chr7_1:74915431-74915450 | None:intergenic | 30.0% |
| CATGTTCATGCATAAAGAAA+AGG | - | chr7_1:74915429-74915448 | Msa1038110:intron | 30.0% | |
| TAAAGAAAAGGAGAGTGAAA+TGG | - | chr7_1:74915441-74915460 | Msa1038110:intron | 30.0% | |
| AAATGGAGCCATTAAATCAA+AGG | - | chr7_1:74915458-74915477 | Msa1038110:intron | 30.0% | |
| ! | GTAGTAGACCTTTGATTTAA+TGG | + | chr7_1:74915469-74915488 | None:intergenic | 30.0% |
| !!! | TCTTTGATTTTGGCTATTCT+TGG | - | chr7_1:74915589-74915608 | Msa1038110:CDS | 30.0% |
| CTTAATAACTAGGCTAGAAA+CGG | + | chr7_1:74915748-74915767 | None:intergenic | 30.0% | |
| ATTAATGTTAGGAAGACAGT+AGG | + | chr7_1:74915878-74915897 | None:intergenic | 30.0% | |
| ACACGTGTACTATAAAAAGT+TGG | + | chr7_1:74916631-74916650 | None:intergenic | 30.0% | |
| ATGATTAAGAAACATACCCA+GGG | + | chr7_1:74917069-74917088 | None:intergenic | 30.0% | |
| AATGATTAAGAAACATACCC+AGG | + | chr7_1:74917070-74917089 | None:intergenic | 30.0% | |
| TGGGTATGTTTCTTAATCAT+TGG | - | chr7_1:74917069-74917088 | Msa1038110:CDS | 30.0% | |
| TCTACTACATTATAGAGTCT+TGG | - | chr7_1:74917127-74917146 | Msa1038110:intron | 30.0% | |
| ATTGTGTCAAAAATGCACTT+AGG | + | chr7_1:74917370-74917389 | None:intergenic | 30.0% | |
| TATTGTAGAAGTTAGTGACA+AGG | + | chr7_1:74917694-74917713 | None:intergenic | 30.0% | |
| TTGTCACTAACTTCTACAAT+AGG | - | chr7_1:74917693-74917712 | Msa1038110:intron | 30.0% | |
| TGTCACTAACTTCTACAATA+GGG | - | chr7_1:74917694-74917713 | Msa1038110:intron | 30.0% | |
| ATTATACGTCGAAGCATATA+TGG | - | chr7_1:74917959-74917978 | Msa1038110:CDS | 30.0% | |
| TTATACGTCGAAGCATATAT+GGG | - | chr7_1:74917960-74917979 | Msa1038110:CDS | 30.0% | |
| AGAAGAATAGGTTTATGTTC+AGG | + | chr7_1:74918074-74918093 | None:intergenic | 30.0% | |
| GACACAAGAATAAGAAGAAT+AGG | + | chr7_1:74918086-74918105 | None:intergenic | 30.0% | |
| ! | CTTTTCCATCAATGATATCA+TGG | + | chr7_1:74918251-74918270 | None:intergenic | 30.0% |
| AAAACATTGGTAGAACATGA+TGG | + | chr7_1:74918300-74918319 | None:intergenic | 30.0% | |
| CAGCCTGAAAATGATAATTA+TGG | + | chr7_1:74918403-74918422 | None:intergenic | 30.0% | |
| ! | TCTCCACTAATTTTCCTATT+TGG | - | chr7_1:74918554-74918573 | Msa1038110:intron | 30.0% |
| ! | CTTAGTCTTCTATACCAAAT+AGG | + | chr7_1:74918571-74918590 | None:intergenic | 30.0% |
| ATTTGGTATAGAAGACTAAG+TGG | - | chr7_1:74918571-74918590 | Msa1038110:intron | 30.0% | |
| ! | TTACTTATGTTTTGTGAGCT+TGG | - | chr7_1:74918661-74918680 | Msa1038110:intron | 30.0% |
| !! | TAGAATCCAAGTTCACTTTT+TGG | - | chr7_1:74918789-74918808 | Msa1038110:intron | 30.0% |
| TCAAGTGCACAAACATAAAT+AGG | + | chr7_1:74918815-74918834 | None:intergenic | 30.0% | |
| ACCAGCATATATATGTGTAT+TGG | - | chr7_1:74918863-74918882 | Msa1038110:intron | 30.0% | |
| TCCAATACACATATATATGC+TGG | + | chr7_1:74918867-74918886 | None:intergenic | 30.0% | |
| !! | ATCATCTGGTCTTAATATGA+TGG | + | chr7_1:74918975-74918994 | None:intergenic | 30.0% |
| GCATTCTAACTTGGTATATT+GGG | - | chr7_1:74918996-74919015 | Msa1038110:intron | 30.0% | |
| CACATTCTGACTTTATACTT+TGG | + | chr7_1:74919023-74919042 | None:intergenic | 30.0% | |
| TAAAAATGGACCATAGGATT+TGG | + | chr7_1:74919120-74919139 | None:intergenic | 30.0% | |
| ACCAAATGTTATTGAGGTTT+GGG | + | chr7_1:74919368-74919387 | None:intergenic | 30.0% | |
| AACCAAATGTTATTGAGGTT+TGG | + | chr7_1:74919369-74919388 | None:intergenic | 30.0% | |
| TAGACAACCAAATGTTATTG+AGG | + | chr7_1:74919374-74919393 | None:intergenic | 30.0% | |
| TCATTGAGTTCATTTGATTC+AGG | - | chr7_1:74919468-74919487 | Msa1038110:CDS | 30.0% | |
| GTGGAACTTTCATTATACAA+AGG | - | chr7_1:74919525-74919544 | Msa1038110:five_prime_UTR | 30.0% | |
| AGATAGGAGTAATGTTTCAA+TGG | - | chr7_1:74919558-74919577 | Msa1038110:five_prime_UTR | 30.0% | |
| GCCATAAGAAAATTAACAAG+TGG | + | chr7_1:74919628-74919647 | None:intergenic | 30.0% | |
| !!! | TGATTTTTTTGTTGGAGCTT+TGG | - | chr7_1:74919657-74919676 | Msa1038110:intron | 30.0% |
| !!! | GATTTTTTTGTTGGAGCTTT+GGG | - | chr7_1:74919658-74919677 | Msa1038110:intron | 30.0% |
| ATAGATGGAATGAGAAATAC+TGG | - | chr7_1:74919700-74919719 | Msa1038110:intron | 30.0% | |
| !!! | TTTTTTACTGGCATGTACAA+TGG | + | chr7_1:74919905-74919924 | None:intergenic | 30.0% |
| ACCAAAGAAAAAACAGGAAA+GGG | + | chr7_1:74919955-74919974 | None:intergenic | 30.0% | |
| AACCAAAGAAAAAACAGGAA+AGG | + | chr7_1:74919956-74919975 | None:intergenic | 30.0% | |
| ! | TGTCTTACACAAAGTGCTTA+TGG | - | chr7_1:74914984-74915003 | Msa1038110:three_prime_UTR | 35.0% |
| ! | TTCCTTCTTTCTTGTTTGGT+TGG | - | chr7_1:74915181-74915200 | Msa1038110:CDS | 35.0% |
| ! | TTGGCTATTCTTGGTAACTT+TGG | - | chr7_1:74915598-74915617 | Msa1038110:CDS | 35.0% |
| GGAAAATAACTTACTGATGG+TGG | + | chr7_1:74915683-74915702 | None:intergenic | 35.0% | |
| ! | ATACAGTTGAAACTTTAGGG+AGG | - | chr7_1:74916354-74916373 | Msa1038110:intron | 35.0% |
| ATGTTATCTTGTAGCAAGTG+CGG | + | chr7_1:74916506-74916525 | None:intergenic | 35.0% | |
| TATCTTTGCTTTACTCAGCT+TGG | - | chr7_1:74916815-74916834 | Msa1038110:intron | 35.0% | |
| ! | CACTTACTTCTCTCAGTTTT+AGG | + | chr7_1:74916859-74916878 | None:intergenic | 35.0% |
| AGTAAGTGCTTATGGAAACT+TGG | - | chr7_1:74916871-74916890 | Msa1038110:intron | 35.0% | |
| !! | TTTTCCAAATGTGGAGCATT+AGG | + | chr7_1:74916916-74916935 | None:intergenic | 35.0% |
| CTAAAAGGAACTTGACATTC+GGG | + | chr7_1:74917580-74917599 | None:intergenic | 35.0% | |
| GCTAAAAGGAACTTGACATT+CGG | + | chr7_1:74917581-74917600 | None:intergenic | 35.0% | |
| !! | CTTGCTATTGCAATCAATGA+AGG | - | chr7_1:74917662-74917681 | Msa1038110:intron | 35.0% |
| GGATATGCAGATTCATAGAA+TGG | + | chr7_1:74917757-74917776 | None:intergenic | 35.0% | |
| ATTGAGGATGCATTGAGTAA+AGG | - | chr7_1:74917916-74917935 | Msa1038110:CDS | 35.0% | |
| ! | GATTGATTGATTCCGTAACA+AGG | - | chr7_1:74918047-74918066 | Msa1038110:CDS | 35.0% |
| TTATGTTCAGGACCTTGTTA+CGG | + | chr7_1:74918062-74918081 | None:intergenic | 35.0% | |
| TCAATGTATGATGCAGGATA+TGG | - | chr7_1:74918104-74918123 | Msa1038110:CDS | 35.0% | |
| CAATGTATGATGCAGGATAT+GGG | - | chr7_1:74918105-74918124 | Msa1038110:CDS | 35.0% | |
| AATGTATGATGCAGGATATG+GGG | - | chr7_1:74918106-74918125 | Msa1038110:CDS | 35.0% | |
| GTTGGTTGCAAATAATTCCA+CGG | + | chr7_1:74918136-74918155 | None:intergenic | 35.0% | |
| CAACCAACAACCGATATAAA+CGG | - | chr7_1:74918148-74918167 | Msa1038110:CDS | 35.0% | |
| CACAAGACTTCCGTTTATAT+CGG | + | chr7_1:74918161-74918180 | None:intergenic | 35.0% | |
| AAGTTGCATGTGTATTCAGT+CGG | + | chr7_1:74918446-74918465 | None:intergenic | 35.0% | |
| CACATGCAACTTATTGAATG+AGG | - | chr7_1:74918454-74918473 | Msa1038110:intron | 35.0% | |
| ATTAGTGGAGAGTTAACCTT+TGG | + | chr7_1:74918545-74918564 | None:intergenic | 35.0% | |
| AATAGGCCAAAAAGTGAACT+TGG | + | chr7_1:74918798-74918817 | None:intergenic | 35.0% | |
| AAGCAATTACGCATTTGACA+CGG | - | chr7_1:74918935-74918954 | Msa1038110:intron | 35.0% | |
| CGCATTCTAACTTGGTATAT+TGG | - | chr7_1:74918995-74919014 | Msa1038110:intron | 35.0% | |
| AGCATGTAAAAATGGACCAT+AGG | + | chr7_1:74919126-74919145 | None:intergenic | 35.0% | |
| !!! | TTGTCATGTATTTTGACCTC+TGG | - | chr7_1:74919152-74919171 | Msa1038110:intron | 35.0% |
| TAAAGCATGTGAAATGAGAG+TGG | - | chr7_1:74919293-74919312 | Msa1038110:CDS | 35.0% | |
| TCCCAAACCTCAATAACATT+TGG | - | chr7_1:74919364-74919383 | Msa1038110:CDS | 35.0% | |
| CCACTTAGAAGAATACTCTT+TGG | + | chr7_1:74919509-74919528 | None:intergenic | 35.0% | |
| !! | CCAAAGAGTATTCTTCTAAG+TGG | - | chr7_1:74919506-74919525 | Msa1038110:five_prime_UTR | 35.0% |
| !!! | ACGGACTCTGATTTTTTTGT+TGG | - | chr7_1:74919649-74919668 | Msa1038110:intron | 35.0% |
| AATGAGAAATACTGGTGGAA+AGG | - | chr7_1:74919708-74919727 | Msa1038110:intron | 35.0% | |
| !! | AACAAGGACAGATTTTGGTA+GGG | - | chr7_1:74919754-74919773 | Msa1038110:intron | 35.0% |
| !!! | TCCCTTTCCTGTTTTTTCTT+TGG | - | chr7_1:74919951-74919970 | Msa1038110:five_prime_UTR | 35.0% |
| AGCCAACCAAACAAGAAAGA+AGG | + | chr7_1:74915186-74915205 | None:intergenic | 40.0% | |
| !!! | TGTGCTGTTGCACTTTTTTG+TGG | - | chr7_1:74915553-74915572 | Msa1038110:CDS | 40.0% |
| GCATAGAAAAGTGAGCAAAC+TGG | + | chr7_1:74915630-74915649 | None:intergenic | 40.0% | |
| CTGAGAGAAGTAAGTGCTTA+TGG | - | chr7_1:74916863-74916882 | Msa1038110:intron | 40.0% | |
| ! | GCGTTGCAATTTTCCAAATG+TGG | + | chr7_1:74916925-74916944 | None:intergenic | 40.0% |
| GAAATGATTCCTTTCCACCA+TGG | - | chr7_1:74916983-74917002 | Msa1038110:CDS | 40.0% | |
| AATCCTTTCCTACTTGTCCA+TGG | + | chr7_1:74917003-74917022 | None:intergenic | 40.0% | |
| ATTAAGAAACATACCCAGGG+TGG | + | chr7_1:74917066-74917085 | None:intergenic | 40.0% | |
| ! | TAGAAGCTTTTGCAGATTGC+AGG | - | chr7_1:74917473-74917492 | Msa1038110:intron | 40.0% |
| ! | AGAAGCTTTTGCAGATTGCA+GGG | - | chr7_1:74917474-74917493 | Msa1038110:intron | 40.0% |
| !! | CGTTGAACTTTTCTAGTCAG+AGG | + | chr7_1:74917518-74917537 | None:intergenic | 40.0% |
| GAAAAGTTCAACGCGACATA+TGG | - | chr7_1:74917525-74917544 | Msa1038110:intron | 40.0% | |
| !! | TCAAGTTCCTTTTAGCTGAC+TGG | - | chr7_1:74917585-74917604 | Msa1038110:intron | 40.0% |
| !! | CAAGTTCCTTTTAGCTGACT+GGG | - | chr7_1:74917586-74917605 | Msa1038110:intron | 40.0% |
| AGATTACCTGGATTTGGCAT+TGG | - | chr7_1:74917611-74917630 | Msa1038110:intron | 40.0% | |
| TACAATAGGGCTGATCATGA+TGG | - | chr7_1:74917707-74917726 | Msa1038110:intron | 40.0% | |
| CAGTATTGCGAACATCTACT+TGG | - | chr7_1:74917794-74917813 | Msa1038110:intron | 40.0% | |
| AGTAGCAATTCCAGCTAGAT+CGG | + | chr7_1:74917843-74917862 | None:intergenic | 40.0% | |
| GTTGGAACTCGTGAAAATTG+AGG | - | chr7_1:74917900-74917919 | Msa1038110:CDS | 40.0% | |
| CTTGTGTCAATGTATGATGC+AGG | - | chr7_1:74918098-74918117 | Msa1038110:CDS | 40.0% | |
| ! | CTTCCGTTTATATCGGTTGT+TGG | + | chr7_1:74918154-74918173 | None:intergenic | 40.0% |
| CGATATAAACGGAAGTCTTG+TGG | - | chr7_1:74918159-74918178 | Msa1038110:CDS | 40.0% | |
| TGTGGCTTCACATCGAAAAA+TGG | - | chr7_1:74918177-74918196 | Msa1038110:intron | 40.0% | |
| CACATCGAAAAATGGATCGA+CGG | - | chr7_1:74918185-74918204 | Msa1038110:intron | 40.0% | |
| AGGCTGTACGTTACTTAATG+AGG | - | chr7_1:74918417-74918436 | Msa1038110:intron | 40.0% | |
| AGTTGCATGTGTATTCAGTC+GGG | + | chr7_1:74918445-74918464 | None:intergenic | 40.0% | |
| !!! | TTTCGCAGCCATTTTTCCAA+AGG | + | chr7_1:74918492-74918511 | None:intergenic | 40.0% |
| TGGAAAAATGGCTGCGAAAA+TGG | - | chr7_1:74918493-74918512 | Msa1038110:intron | 40.0% | |
| TCTTATTGGAGAATGGCCAA+AGG | - | chr7_1:74918526-74918545 | Msa1038110:intron | 40.0% | |
| TTGGATTCTCTGTATCTGTC+CGG | - | chr7_1:74918680-74918699 | Msa1038110:intron | 40.0% | |
| CAAGATTTAGTTGGACGAAC+CGG | + | chr7_1:74918702-74918721 | None:intergenic | 40.0% | |
| TCCAACTAAATCTTGGCTGT+TGG | - | chr7_1:74918707-74918726 | Msa1038110:intron | 40.0% | |
| CCAACTAAATCTTGGCTGTT+GGG | - | chr7_1:74918708-74918727 | Msa1038110:intron | 40.0% | |
| ATTTAGCTGGAGAAGCTAGA+CGG | - | chr7_1:74918761-74918780 | Msa1038110:intron | 40.0% | |
| CAAGTTAGAATGCGATCATC+TGG | + | chr7_1:74918989-74919008 | None:intergenic | 40.0% | |
| CAGATGATCGCATTCTAACT+TGG | - | chr7_1:74918987-74919006 | Msa1038110:intron | 40.0% | |
| CAATCTAAACCACCTGATCA+AGG | + | chr7_1:74919051-74919070 | None:intergenic | 40.0% | |
| CTTGATCAGGTGGTTTAGAT+TGG | - | chr7_1:74919049-74919068 | Msa1038110:intron | 40.0% | |
| ACCAAGGAATCCAAATCCTA+TGG | - | chr7_1:74919107-74919126 | Msa1038110:intron | 40.0% | |
| ACCATAGGATTTGGATTCCT+TGG | + | chr7_1:74919111-74919130 | None:intergenic | 40.0% | |
| CTTACATGCATGCTTAGAAG+AGG | + | chr7_1:74919264-74919283 | None:intergenic | 40.0% | |
| CTCTTCTAAGCATGCATGTA+AGG | - | chr7_1:74919262-74919281 | Msa1038110:CDS | 40.0% | |
| TCTAAGCATGCATGTAAGGA+TGG | - | chr7_1:74919266-74919285 | Msa1038110:CDS | 40.0% | |
| CTAAGCATGCATGTAAGGAT+GGG | - | chr7_1:74919267-74919286 | Msa1038110:CDS | 40.0% | |
| !! | TGCAGCTTGCTGATAGAATT+AGG | - | chr7_1:74919334-74919353 | Msa1038110:CDS | 40.0% |
| ! | TGCTACTACTGCACTTGTTT+TGG | - | chr7_1:74919409-74919428 | Msa1038110:CDS | 40.0% |
| CAAAGGTAAGAAGGCAAGAT+AGG | - | chr7_1:74919542-74919561 | Msa1038110:five_prime_UTR | 40.0% | |
| !! | ACTTGGTGCTTCCTTATAGA+TGG | - | chr7_1:74919685-74919704 | Msa1038110:intron | 40.0% |
| GATGGAATGAGAAATACTGG+TGG | - | chr7_1:74919703-74919722 | Msa1038110:intron | 40.0% | |
| !! | CAACAAGGACAGATTTTGGT+AGG | - | chr7_1:74919753-74919772 | Msa1038110:intron | 40.0% |
| ATGGCCCACAAGTTTCTTTG+AGG | - | chr7_1:74915333-74915352 | Msa1038110:CDS | 45.0% | |
| GCCACCTCAAAGAAACTTGT+GGG | + | chr7_1:74915340-74915359 | None:intergenic | 45.0% | |
| TGCCACCTCAAAGAAACTTG+TGG | + | chr7_1:74915341-74915360 | None:intergenic | 45.0% | |
| TACTACTCCTCTTGAGAGAG+TGG | - | chr7_1:74915483-74915502 | Msa1038110:intron | 45.0% | |
| TGAGAAACCACTCTCTCAAG+AGG | + | chr7_1:74915493-74915512 | None:intergenic | 45.0% | |
| TTGAGAGAGTGGTTTCTCAG+AGG | - | chr7_1:74915494-74915513 | Msa1038110:intron | 45.0% | |
| TGAGAGAGTGGTTTCTCAGA+GGG | - | chr7_1:74915495-74915514 | Msa1038110:intron | 45.0% | |
| GCAACAGCACATATCTGACA+TGG | + | chr7_1:74915544-74915563 | None:intergenic | 45.0% | |
| AAGTGCGGTCTGAGTCAAAA+AGG | + | chr7_1:74916491-74916510 | None:intergenic | 45.0% | |
| ! | ATGTGGAGCATTAGGCAAGT+TGG | + | chr7_1:74916908-74916927 | None:intergenic | 45.0% |
| CTTGCCTAATGCTCCACATT+TGG | - | chr7_1:74916909-74916928 | Msa1038110:intron | 45.0% | |
| TTCCTATACGTGTGTCGAGA+CGG | + | chr7_1:74916966-74916985 | None:intergenic | 45.0% | |
| TACCCTCAGATACAGCAAGA+GGG | + | chr7_1:74917038-74917057 | None:intergenic | 45.0% | |
| TTACCCTCAGATACAGCAAG+AGG | + | chr7_1:74917039-74917058 | None:intergenic | 45.0% | |
| GCATGCAGAGTAGATACTTG+AGG | - | chr7_1:74917406-74917425 | Msa1038110:CDS | 45.0% | |
| ATCTCTCCCAGTCAGCTAAA+AGG | + | chr7_1:74917595-74917614 | None:intergenic | 45.0% | |
| TGGGAGAGATTACCTGGATT+TGG | - | chr7_1:74917605-74917624 | Msa1038110:intron | 45.0% | |
| GCTCAAATTGCTGGAATGTG+TGG | - | chr7_1:74917635-74917654 | Msa1038110:intron | 45.0% | |
| ACTTGGAATGTTGCTCATGC+AGG | - | chr7_1:74917811-74917830 | Msa1038110:intron | 45.0% | |
| CTTGGAATGTTGCTCATGCA+GGG | - | chr7_1:74917812-74917831 | Msa1038110:intron | 45.0% | |
| GTAGCAATTCCAGCTAGATC+GGG | + | chr7_1:74917842-74917861 | None:intergenic | 45.0% | |
| GTTCTTGTGAAAGCTTGCCT+AGG | + | chr7_1:74917997-74918016 | None:intergenic | 45.0% | |
| ATCGAAAAATGGATCGACGG+TGG | - | chr7_1:74918188-74918207 | Msa1038110:intron | 45.0% | |
| !! | CCATTTTTCCAAAGGCAGCA+TGG | + | chr7_1:74918484-74918503 | None:intergenic | 45.0% |
| ! | CCATGCTGCCTTTGGAAAAA+TGG | - | chr7_1:74918481-74918500 | Msa1038110:intron | 45.0% |
| CGGTTCGTCCAACTAAATCT+TGG | - | chr7_1:74918700-74918719 | Msa1038110:intron | 45.0% | |
| CCCAACAGCCAAGATTTAGT+TGG | + | chr7_1:74918711-74918730 | None:intergenic | 45.0% | |
| AAATCTTGGCTGTTGGGTCT+AGG | - | chr7_1:74918714-74918733 | Msa1038110:intron | 45.0% | |
| ATGCGTAATTGCTTGAGTGC+AGG | + | chr7_1:74918899-74918918 | None:intergenic | 45.0% | |
| GAATGTGAACGACCTTGATC+AGG | - | chr7_1:74919036-74919055 | Msa1038110:intron | 45.0% | |
| CCTTGGTACTCATGCAATCA+CGG | + | chr7_1:74919094-74919113 | None:intergenic | 45.0% | |
| TTTCTACCATTCTCCTCCTG+AGG | + | chr7_1:74919183-74919202 | None:intergenic | 45.0% | |
| GCATGCTTAGAAGAGGTCTT+GGG | + | chr7_1:74919257-74919276 | None:intergenic | 45.0% | |
| TGCATGCTTAGAAGAGGTCT+TGG | + | chr7_1:74919258-74919277 | None:intergenic | 45.0% | |
| TTGGTTGTCTACAGAGATGC+AGG | - | chr7_1:74919383-74919402 | Msa1038110:CDS | 45.0% | |
| !! | TTGGAGCTTTGGGTTCAACT+TGG | - | chr7_1:74919668-74919687 | Msa1038110:intron | 45.0% |
| ! | GCGTCAACAAGGACAGATTT+TGG | - | chr7_1:74919749-74919768 | Msa1038110:intron | 45.0% |
| ! | GCCCACAAGTTTCTTTGAGG+TGG | - | chr7_1:74915336-74915355 | Msa1038110:CDS | 50.0% |
| AACCGTCTCGACACACGTAT+AGG | - | chr7_1:74916961-74916980 | Msa1038110:CDS | 50.0% | |
| ! | CCTACTTGTCCATGGTGGAA+AGG | + | chr7_1:74916995-74917014 | None:intergenic | 50.0% |
| CCTTTCCACCATGGACAAGT+AGG | - | chr7_1:74916992-74917011 | Msa1038110:CDS | 50.0% | |
| CCTTTCCTACTTGTCCATGG+TGG | + | chr7_1:74917000-74917019 | None:intergenic | 50.0% | |
| CCACCATGGACAAGTAGGAA+AGG | - | chr7_1:74916997-74917016 | Msa1038110:CDS | 50.0% | |
| ACCCTCAGATACAGCAAGAG+GGG | + | chr7_1:74917037-74917056 | None:intergenic | 50.0% | |
| TGAGGGTAATCATCCACCCT+GGG | - | chr7_1:74917050-74917069 | Msa1038110:CDS | 50.0% | |
| TTCGGGTCGCTACAGTTTGA+TGG | + | chr7_1:74917563-74917582 | None:intergenic | 50.0% | |
| TGAGCTCCAATGCCAAATCC+AGG | + | chr7_1:74917620-74917639 | None:intergenic | 50.0% | |
| ! | GGCATTGGAGCTCAAATTGC+TGG | - | chr7_1:74917626-74917645 | Msa1038110:intron | 50.0% |
| GCTGATCATGATGGCTGCAA+GGG | - | chr7_1:74917716-74917735 | Msa1038110:intron | 50.0% | |
| ACGTCGAAGCATATATGGGC+AGG | - | chr7_1:74917964-74917983 | Msa1038110:CDS | 50.0% | |
| GTGAAAGCTTGCCTAGGAGT+TGG | + | chr7_1:74917991-74918010 | None:intergenic | 50.0% | |
| GAAAAATGGATCGACGGTGG+TGG | - | chr7_1:74918191-74918210 | Msa1038110:intron | 50.0% | |
| TCCAACGTGCGACATTTAGC+TGG | - | chr7_1:74918748-74918767 | Msa1038110:intron | 50.0% | |
| TCCAGCTAAATGTCGCACGT+TGG | + | chr7_1:74918752-74918771 | None:intergenic | 50.0% | |
| TGTGAACGACCTTGATCAGG+TGG | - | chr7_1:74919039-74919058 | Msa1038110:intron | 50.0% | |
| ! | ATTGGTGTCCCCGTGAATCA+CGG | - | chr7_1:74919067-74919086 | Msa1038110:intron | 50.0% |
| CCGTGATTGCATGAGTACCA+AGG | - | chr7_1:74919091-74919110 | Msa1038110:intron | 50.0% | |
| TATGGTCCAATCACAAGCCC+TGG | - | chr7_1:74919229-74919248 | Msa1038110:intron | 50.0% | |
| ATGGTCCAATCACAAGCCCT+GGG | - | chr7_1:74919230-74919249 | Msa1038110:intron | 50.0% | |
| ! | GCTGAGTATGAAGCTAGCCT+GGG | - | chr7_1:74919580-74919599 | Msa1038110:five_prime_UTR | 50.0% |
| ! | AGTATGAAGCTAGCCTGGGA+AGG | - | chr7_1:74919584-74919603 | Msa1038110:five_prime_UTR | 50.0% |
| ! | GTATGAAGCTAGCCTGGGAA+GGG | - | chr7_1:74919585-74919604 | Msa1038110:five_prime_UTR | 50.0% |
| ACTGGTGGAAAGGTCATGTC+TGG | - | chr7_1:74919718-74919737 | Msa1038110:intron | 50.0% | |
| TGGCTACTTGAGCGTCAACA+AGG | - | chr7_1:74919738-74919757 | Msa1038110:intron | 50.0% | |
| CCCTCAGATACAGCAAGAGG+GGG | + | chr7_1:74917036-74917055 | None:intergenic | 55.0% | |
| ! | CCCCCTCTTGCTGTATCTGA+GGG | - | chr7_1:74917033-74917052 | Msa1038110:CDS | 55.0% |
| CTGAGGGTAATCATCCACCC+TGG | - | chr7_1:74917049-74917068 | Msa1038110:CDS | 55.0% | |
| GCTGACTGGGAGAGATTACC+TGG | - | chr7_1:74917599-74917618 | Msa1038110:intron | 55.0% | |
| GGCTGATCATGATGGCTGCA+AGG | - | chr7_1:74917715-74917734 | Msa1038110:intron | 55.0% | |
| AGAATGTCGCCAACGTGCGT+TGG | - | chr7_1:74917882-74917901 | Msa1038110:CDS | 55.0% | |
| TCACGAGTTCCAACGCACGT+TGG | + | chr7_1:74917894-74917913 | None:intergenic | 55.0% | |
| TATGGGCAGGACCAACTCCT+AGG | - | chr7_1:74917977-74917996 | Msa1038110:CDS | 55.0% | |
| ! | TTGGTGTCCCCGTGAATCAC+GGG | - | chr7_1:74919068-74919087 | Msa1038110:intron | 55.0% |
| AATCACGGCCCGTGATTCAC+GGG | + | chr7_1:74919079-74919098 | None:intergenic | 55.0% | |
| CAATCACGGCCCGTGATTCA+CGG | + | chr7_1:74919080-74919099 | None:intergenic | 55.0% | |
| ! | TTGACCTCTGGAGATGCCTC+AGG | - | chr7_1:74919164-74919183 | Msa1038110:intron | 55.0% |
| GAGATGCCTCAGGAGGAGAA+TGG | - | chr7_1:74919174-74919193 | Msa1038110:intron | 55.0% | |
| AGAAGAGGTCTTGGGACCCA+GGG | + | chr7_1:74919249-74919268 | None:intergenic | 55.0% | |
| TAGAAGAGGTCTTGGGACCC+AGG | + | chr7_1:74919250-74919269 | None:intergenic | 55.0% | |
| GGCTGAGTATGAAGCTAGCC+TGG | - | chr7_1:74919579-74919598 | Msa1038110:five_prime_UTR | 55.0% | |
| TAGTGCTTCTCTCCCTTCCC+AGG | + | chr7_1:74919600-74919619 | None:intergenic | 55.0% | |
| ! | GCCCCCTCTTGCTGTATCTG+AGG | - | chr7_1:74917032-74917051 | Msa1038110:CDS | 60.0% |
| ATCACGGCCCGTGATTCACG+GGG | + | chr7_1:74919078-74919097 | None:intergenic | 60.0% | |
| ! | ACCTCTGGAGATGCCTCAGG+AGG | - | chr7_1:74919167-74919186 | Msa1038110:intron | 60.0% |
| ! | TCCTCCTGAGGCATCTCCAG+AGG | + | chr7_1:74919171-74919190 | None:intergenic | 60.0% |
| TGGGACCCAGGGCTTGTGAT+TGG | + | chr7_1:74919238-74919257 | None:intergenic | 60.0% | |
| CAGGGCTGTCCCGATCTAGC+TGG | - | chr7_1:74917830-74917849 | Msa1038110:intron | 65.0% | |
| GCAGGATATGGGGCGATCCG+TGG | - | chr7_1:74918116-74918135 | Msa1038110:CDS | 65.0% | |
| !! | GAGGAGCGCCATGCTGCCTT+TGG | - | chr7_1:74918473-74918492 | Msa1038110:intron | 65.0% |
| ! | TCGACGGTGGTGGCGAGCAC+AGG | - | chr7_1:74918201-74918220 | Msa1038110:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 74914947 | 74919975 | 74914947 | ID=Msa1038110;Name=Msa1038110 |
| chr7_1 | mRNA | 74914947 | 74919975 | 74914947 | ID=Msa1038110-mRNA-1;Parent=Msa1038110;Name=Msa1038110-mRNA-1;_AED=0.25;_eAED=0.25;_QI=235|0.77|0.9|1|0.88|0.8|10|201|603 |
| chr7_1 | exon | 74914947 | 74915432 | 74914947 | ID=Msa1038110-mRNA-1:exon:19053;Parent=Msa1038110-mRNA-1 |
| chr7_1 | exon | 74915518 | 74915736 | 74915518 | ID=Msa1038110-mRNA-1:exon:19052;Parent=Msa1038110-mRNA-1 |
| chr7_1 | exon | 74916124 | 74916186 | 74916124 | ID=Msa1038110-mRNA-1:exon:19051;Parent=Msa1038110-mRNA-1 |
| chr7_1 | exon | 74916375 | 74916503 | 74916375 | ID=Msa1038110-mRNA-1:exon:19050;Parent=Msa1038110-mRNA-1 |
| chr7_1 | exon | 74916700 | 74916802 | 74916700 | ID=Msa1038110-mRNA-1:exon:19049;Parent=Msa1038110-mRNA-1 |
| chr7_1 | exon | 74916924 | 74917089 | 74916924 | ID=Msa1038110-mRNA-1:exon:19048;Parent=Msa1038110-mRNA-1 |
| chr7_1 | exon | 74917185 | 74917434 | 74917185 | ID=Msa1038110-mRNA-1:exon:19047;Parent=Msa1038110-mRNA-1 |
| chr7_1 | exon | 74917851 | 74918188 | 74917851 | ID=Msa1038110-mRNA-1:exon:19046;Parent=Msa1038110-mRNA-1 |
| chr7_1 | exon | 74919234 | 74919608 | 74919234 | ID=Msa1038110-mRNA-1:exon:19045;Parent=Msa1038110-mRNA-1 |
| chr7_1 | exon | 74919857 | 74919975 | 74919857 | ID=Msa1038110-mRNA-1:exon:19044;Parent=Msa1038110-mRNA-1 |
| chr7_1 | five_prime_UTR | 74919857 | 74919975 | 74919857 | ID=Msa1038110-mRNA-1:five_prime_utr;Parent=Msa1038110-mRNA-1 |
| chr7_1 | five_prime_UTR | 74919493 | 74919608 | 74919493 | ID=Msa1038110-mRNA-1:five_prime_utr;Parent=Msa1038110-mRNA-1 |
| chr7_1 | CDS | 74919234 | 74919492 | 74919234 | ID=Msa1038110-mRNA-1:cds;Parent=Msa1038110-mRNA-1 |
| chr7_1 | CDS | 74917851 | 74918188 | 74917851 | ID=Msa1038110-mRNA-1:cds;Parent=Msa1038110-mRNA-1 |
| chr7_1 | CDS | 74917185 | 74917434 | 74917185 | ID=Msa1038110-mRNA-1:cds;Parent=Msa1038110-mRNA-1 |
| chr7_1 | CDS | 74916924 | 74917089 | 74916924 | ID=Msa1038110-mRNA-1:cds;Parent=Msa1038110-mRNA-1 |
| chr7_1 | CDS | 74916700 | 74916802 | 74916700 | ID=Msa1038110-mRNA-1:cds;Parent=Msa1038110-mRNA-1 |
| chr7_1 | CDS | 74916375 | 74916503 | 74916375 | ID=Msa1038110-mRNA-1:cds;Parent=Msa1038110-mRNA-1 |
| chr7_1 | CDS | 74916124 | 74916186 | 74916124 | ID=Msa1038110-mRNA-1:cds;Parent=Msa1038110-mRNA-1 |
| chr7_1 | CDS | 74915518 | 74915736 | 74915518 | ID=Msa1038110-mRNA-1:cds;Parent=Msa1038110-mRNA-1 |
| chr7_1 | CDS | 74915148 | 74915432 | 74915148 | ID=Msa1038110-mRNA-1:cds;Parent=Msa1038110-mRNA-1 |
| chr7_1 | three_prime_UTR | 74914947 | 74915147 | 74914947 | ID=Msa1038110-mRNA-1:three_prime_utr;Parent=Msa1038110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
