AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0697600


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0697600 MtrunA17_Chr4g0050421 98.551 345 4 1 1 344 1 345 0.0 708
Msa0697600 MtrunA17_Chr5g0430001 66.279 344 95 3 1 344 1 323 2.98e-167 469
Msa0697600 MtrunA17_Chr5g0430011 70.755 318 76 4 29 344 22 324 2.37e-159 449
Msa0697600 MtrunA17_Chr5g0409121 68.459 279 86 1 68 344 52 330 8.24e-150 425
Msa0697600 MtrunA17_Chr2g0289361 26.667 180 111 3 158 317 109 287 4.00e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0697600 AT5G64210.1 77.500 280 59 2 67 344 76 353 8.66e-165 464
Msa0697600 AT3G22370.1 69.231 286 79 1 68 344 69 354 1.01e-154 438
Msa0697600 AT3G22360.1 67.616 281 91 0 64 344 45 325 8.23e-149 422
Msa0697600 AT3G27620.1 70.342 263 78 0 82 344 67 329 2.67e-146 416
Msa0697600 AT1G32350.1 68.045 266 85 0 79 344 53 318 3.34e-144 410
Msa0697600 AT1G32350.2 68.016 247 79 0 79 325 53 299 2.00e-132 380
Msa0697600 AT4G22260.1 30.000 180 105 3 158 317 121 299 7.82e-16 78.2

Find 120 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTATGACATCTTTCAATT+TGG 0.225219 4_4:-67671187 None:intergenic
ACGTGGTTGTGTCGAGTTAT+TGG 0.242663 4_4:+67669985 Msa0697600:CDS
TGATAAGTTTCCAAGAAAAT+TGG 0.249578 4_4:-67669665 None:intergenic
TTCTGGATAAAGTCGCTTAC+AGG 0.257073 4_4:+67670248 Msa0697600:CDS
AGCTCCTCTTGGTTATCATT+AGG 0.258014 4_4:+67672874 Msa0697600:CDS
ATCTTTCAATTTGGCATCCT+TGG 0.265673 4_4:-67671178 None:intergenic
CGTGGTTGTGTCGAGTTATT+GGG 0.294734 4_4:+67669986 Msa0697600:CDS
AACTTTGACGGTTAGAATTC+CGG 0.295362 4_4:-67669764 None:intergenic
GATAAGATCTGGAACATAAC+TGG 0.298266 4_4:+67673183 Msa0697600:three_prime_UTR
GCTCCTCTTGGTTATCATTA+GGG 0.299342 4_4:+67672875 Msa0697600:CDS
ATTCTGTATGATCAAAATAT+TGG 0.347173 4_4:-67672995 None:intergenic
GAAATGGTATGAGAGATTTC+TGG 0.357389 4_4:+67670960 Msa0697600:CDS
TTATGCTTTGATCATATGTT+TGG 0.364593 4_4:+67673020 Msa0697600:three_prime_UTR
AGAAATCTCTCATACCATTT+CGG 0.371303 4_4:-67670958 None:intergenic
CAAGTTCTACCATAGTCATT+AGG 0.381374 4_4:-67670930 None:intergenic
GAGAAGAAGGAGGAGAGTTC+CGG 0.382377 4_4:+67669951 Msa0697600:CDS
CAACTCTATGAGCCACCTTT+GGG 0.383053 4_4:-67671038 None:intergenic
ACAACTCTATGAGCCACCTT+TGG 0.383957 4_4:-67671039 None:intergenic
ATCAAAATATTGGTGCTTAT+AGG 0.384018 4_4:-67672985 None:intergenic
AGCATCCCTCCAACCATTCC+AGG 0.387944 4_4:-67670820 None:intergenic
CTGCCATTGCAATAGACTAT+TGG 0.388788 4_4:+67671148 Msa0697600:CDS
AGGATGGAACAGAGTGGCCT+TGG 0.398321 4_4:+67670036 Msa0697600:CDS
CTCTACGCCGATGGCGGAAA+CGG 0.400110 4_4:+67669834 Msa0697600:CDS
AATGTATAGCTTCTTCTTCA+AGG 0.401405 4_4:-67671068 None:intergenic
ATTTCTGGTTCTTGCTGTAC+AGG 0.408480 4_4:+67670975 Msa0697600:CDS
TCACAACCGCCGAACTTTGA+CGG 0.414769 4_4:-67669776 None:intergenic
ACTGTTCTCTTGATAAGATC+TGG 0.421302 4_4:+67673172 Msa0697600:three_prime_UTR
TTCCTACACTGAGTATTTGA+AGG 0.429843 4_4:+67671089 Msa0697600:CDS
TCATTCGCGGCGGCGGAAAT+CGG 0.438546 4_4:+67669801 Msa0697600:CDS
GAAACAGTTGCAGCTGTCCC+TGG 0.444443 4_4:+67670802 Msa0697600:CDS
AACCACGTTATTCTTTGTTC+CGG 0.444667 4_4:-67669970 None:intergenic
TCTTTCAATTTGGCATCCTT+GGG 0.445531 4_4:-67671177 None:intergenic
CGCTGATGAGGCTCACCATC+GGG 0.449836 4_4:+67671218 Msa0697600:CDS
CCATCCTCTCTCATAATCTT+CGG 0.453617 4_4:-67670020 None:intergenic
AAGGTGGCTCATAGAGTTGT+TGG 0.454036 4_4:+67671042 Msa0697600:CDS
ATGATGCTTATTCAGATCAA+TGG 0.454262 4_4:-67670212 None:intergenic
GCCTCCGTCTCTTCCGCTGA+TGG 0.455263 4_4:-67669909 None:intergenic
GTGGCCTTGGAACTGCTTCA+TGG 0.462385 4_4:+67670049 Msa0697600:CDS
GAGGATGCACCTAATGACTA+TGG 0.466754 4_4:+67670921 Msa0697600:CDS
GAACCCTCCGTTTCCGCCAT+CGG 0.466915 4_4:-67669841 None:intergenic
TTTCAAAATTAATGAACTGT+GGG 0.471816 4_4:-67673226 None:intergenic
GAATTCTAACCGTCAAAGTT+CGG 0.475373 4_4:+67669767 Msa0697600:CDS
ATTTCAGCATAGTGGTGGTT+GGG 0.477652 4_4:+67670867 Msa0697600:CDS
GCAGTTCTTTACCGTGGAAG+TGG 0.484800 4_4:-67672841 None:intergenic
TAGAACTTGTGAAGCCGAAA+TGG 0.485630 4_4:+67670944 Msa0697600:CDS
GCATTCAGCATTGTGTTACA+TGG 0.485894 4_4:+67669719 Msa0697600:CDS
TGTGAGGTCATTCGCGGCGG+CGG 0.486795 4_4:+67669794 Msa0697600:CDS
CCATTGCAATAGACTATTGG+AGG 0.495126 4_4:+67671151 Msa0697600:CDS
ACTTTATCCAGAAAATTCTT+CGG 0.501906 4_4:-67670238 None:intergenic
AATTTCAGCATAGTGGTGGT+TGG 0.511730 4_4:+67670866 Msa0697600:CDS
GCTGTCCCTGGAATGGTTGG+AGG 0.515427 4_4:+67670814 Msa0697600:CDS
TCTATTGCAATGGCAGGAGC+AGG 0.517572 4_4:-67671141 None:intergenic
CGGGACGCACCAGCTCCTCT+TGG 0.517676 4_4:+67672863 Msa0697600:CDS
CAATAGTCTATTGCAATGGC+AGG 0.522929 4_4:-67671147 None:intergenic
GCCGAGCTTTGATCGGTGGC+CGG 0.523135 4_4:+67669745 Msa0697600:CDS
TTTCTGGTTCTTGCTGTACA+GGG 0.524259 4_4:+67670976 Msa0697600:CDS
GGCGGTTGTGAGGTCATTCG+CGG 0.528832 4_4:+67669788 Msa0697600:CDS
GACGGAGAAGAACGAGAAGA+AGG 0.529053 4_4:+67669938 Msa0697600:CDS
TAATGATAACCAAGAGGAGC+TGG 0.534076 4_4:-67672872 None:intergenic
GCATCCCTTAAAATAGAAAG+AGG 0.534522 4_4:+67672953 Msa0697600:three_prime_UTR
CCGAAGATTATGAGAGAGGA+TGG 0.536815 4_4:+67670020 Msa0697600:CDS
CTGGAACATAACTGGGTGAA+GGG 0.542432 4_4:+67673191 Msa0697600:three_prime_UTR
AGGTGGCTCATAGAGTTGTT+GGG 0.545630 4_4:+67671043 Msa0697600:CDS
TCCGGCCACCGATCAAAGCT+CGG 0.550176 4_4:-67669746 None:intergenic
ACGCCGATGGCGGAAACGGA+GGG 0.558279 4_4:+67669838 Msa0697600:CDS
ATGGCTCGCCGAGCTTTGAT+CGG 0.558446 4_4:+67669738 Msa0697600:CDS
AACAGTCATTCGCGCTGATG+AGG 0.563488 4_4:+67671206 Msa0697600:CDS
TACGCCGATGGCGGAAACGG+AGG 0.565606 4_4:+67669837 Msa0697600:CDS
CTTCCACGGTAAAGAACTGC+GGG 0.566723 4_4:+67672844 Msa0697600:CDS
GGTTTCGTAATGCAAACTAA+AGG 0.570417 4_4:-67672925 None:intergenic
GTGGTTGTGTCGAGTTATTG+GGG 0.571030 4_4:+67669987 Msa0697600:CDS
GCAGCTGTCCCTGGAATGGT+TGG 0.572427 4_4:+67670811 Msa0697600:CDS
CAGAGGCATCTCTACGCCGA+TGG 0.573886 4_4:+67669825 Msa0697600:CDS
TTGAAGAAGCAGAGAATGAG+AGG 0.575067 4_4:+67670902 Msa0697600:CDS
ATAAGATCTGGAACATAACT+GGG 0.582846 4_4:+67673184 Msa0697600:three_prime_UTR
TCTTCCGCTGATGGCTTCGA+CGG 0.586594 4_4:-67669900 None:intergenic
GCCATCAGCGGAAGAGACGG+AGG 0.587726 4_4:+67669908 Msa0697600:CDS
TATTTGAAGGACATTGATAG+TGG 0.587742 4_4:+67671102 Msa0697600:CDS
TTTGATTGATAAGTCTCCCA+TGG 0.588432 4_4:-67670184 None:intergenic
GAAGCCATCAGCGGAAGAGA+CGG 0.589166 4_4:+67669905 Msa0697600:CDS
GCGCTGATGAGGCTCACCAT+CGG 0.590135 4_4:+67671217 Msa0697600:CDS
CGAAAATTTCAGCATAGTGG+TGG 0.590958 4_4:+67670862 Msa0697600:CDS
CTGTTTCGAGCATCATTGCA+CGG 0.591594 4_4:-67670786 None:intergenic
GCTTCATCTTTCGAGAGCGA+AGG 0.591663 4_4:-67669698 None:intergenic
GTCAAAGTTCGGCGGTTGTG+AGG 0.592006 4_4:+67669778 Msa0697600:CDS
TTACATACTTTCCCCAAAGG+TGG 0.592089 4_4:+67671026 Msa0697600:CDS
CTGTCCCTGGAATGGTTGGA+GGG 0.593126 4_4:+67670815 Msa0697600:CDS
CTCCGAAAATTTCAGCATAG+TGG 0.594257 4_4:+67670859 Msa0697600:CDS
TCTGGAACATAACTGGGTGA+AGG 0.594436 4_4:+67673190 Msa0697600:three_prime_UTR
CGGCGGCGGAAATCGGCCAG+AGG 0.595135 4_4:+67669808 Msa0697600:CDS
AACTCTATGAGCCACCTTTG+GGG 0.595501 4_4:-67671037 None:intergenic
ACTTTACATACTTTCCCCAA+AGG 0.601341 4_4:+67671023 Msa0697600:CDS
CATCGGCGTAGAGATGCCTC+TGG 0.604415 4_4:-67669824 None:intergenic
ATGCAGGATATCCACTTCCA+CGG 0.604624 4_4:+67672830 Msa0697600:intron
AGGCATCTCTACGCCGATGG+CGG 0.606114 4_4:+67669828 Msa0697600:CDS
AGAGACGGAGGCGAAATCGA+CGG 0.606512 4_4:+67669920 Msa0697600:CDS
GAGGCCGAAGATTATGAGAG+AGG 0.612635 4_4:+67670016 Msa0697600:CDS
TGCGCCGTCGAAGCCATCAG+CGG 0.613702 4_4:+67669896 Msa0697600:CDS
GGAGAAGAACGAGAAGAAGG+AGG 0.617945 4_4:+67669941 Msa0697600:CDS
TTCAAAATTAATGAACTGTG+GGG 0.618868 4_4:-67673225 None:intergenic
TGGAACATAACTGGGTGAAG+GGG 0.619345 4_4:+67673192 Msa0697600:three_prime_UTR
GTTACCATGAAGCAGTTCCA+AGG 0.624690 4_4:-67670053 None:intergenic
GCTCGCCGAGCTTTGATCGG+TGG 0.625356 4_4:+67669741 Msa0697600:CDS
AGTTGCAGCTGTCCCTGGAA+TGG 0.626357 4_4:+67670807 Msa0697600:CDS
AGACTATTGGAGGCTTCCCA+AGG 0.628882 4_4:+67671161 Msa0697600:CDS
GCATCCCTCCAACCATTCCA+GGG 0.636143 4_4:-67670819 None:intergenic
GAACACTCACTGAAGCGAAG+TGG 0.637444 4_4:-67671248 None:intergenic
GTCCTTCAAATACTCAGTGT+AGG 0.637701 4_4:-67671091 None:intergenic
CGTCCCGCAGTTCTTTACCG+TGG 0.639191 4_4:-67672847 None:intergenic
TGTAACTCTCACATTAAACA+TGG 0.640366 4_4:-67673144 None:intergenic
CCTCCAATAGTCTATTGCAA+TGG 0.640373 4_4:-67671151 None:intergenic
AATTACTGAAGAAGAAGCAA+CGG 0.646935 4_4:-67669636 None:intergenic
TTCTAACCGTCAAAGTTCGG+CGG 0.651224 4_4:+67669770 Msa0697600:CDS
TGGTTGTGTCGAGTTATTGG+GGG 0.651952 4_4:+67669988 Msa0697600:CDS
CGAAGTGGTTCACATCCCGA+TGG 0.653019 4_4:-67671233 None:intergenic
AAGCCCTAATGATAACCAAG+AGG 0.665170 4_4:-67672878 None:intergenic
ACTTCCACGGTAAAGAACTG+CGG 0.706975 4_4:+67672843 Msa0697600:CDS
GGTTGTGAGGTCATTCGCGG+CGG 0.720769 4_4:+67669791 Msa0697600:CDS
TGAGAGAGGATGGAACAGAG+TGG 0.750950 4_4:+67670030 Msa0697600:CDS
TTCCGGAACAAAGAATAACG+TGG 0.755903 4_4:+67669968 Msa0697600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTACAAAAAAATAGTATAAA+CGG - chr4_4:67673066-67673085 None:intergenic 10.0%
!!! TAATTTAGTCAATTTTTTAC+CGG + chr4_4:67670438-67670457 Msa0697600:intron 15.0%
!! TATCATCTTACATTTATTTA+CGG + chr4_4:67671329-67671348 Msa0697600:intron 15.0%
!!! TCATAGTTGTTTTAAAATAA+AGG + chr4_4:67672681-67672700 Msa0697600:intron 15.0%
!!! AGTTCATTAATTTTGAAAAA+AGG + chr4_4:67673231-67673250 Msa0697600:three_prime_UTR 15.0%
!! TTTGCTACATATGAATAAAA+GGG + chr4_4:67670526-67670545 Msa0697600:intron 20.0%
!! ATAAATGTAAGATGATATGT+TGG - chr4_4:67671326-67671345 None:intergenic 20.0%
!! ACATGAAAACTGTAAAATTT+AGG + chr4_4:67671438-67671457 Msa0697600:intron 20.0%
!!! AAAACTGTAAAATTTAGGAT+TGG + chr4_4:67671443-67671462 Msa0697600:intron 20.0%
!!! TAAAATTTAGGATTGGTATA+AGG + chr4_4:67671450-67671469 Msa0697600:intron 20.0%
!!! TTTACTTATATCCAACTTTT+AGG + chr4_4:67671701-67671720 Msa0697600:intron 20.0%
!!! TTACTTATATCCAACTTTTA+GGG + chr4_4:67671702-67671721 Msa0697600:intron 20.0%
!!! AATTATTTTAAGTGATGTTG+TGG + chr4_4:67672209-67672228 Msa0697600:intron 20.0%
!!! TTTCTTTTTCATAATAATGC+TGG + chr4_4:67672754-67672773 Msa0697600:intron 20.0%
!! GGAATTGTATTATAAAAACA+GGG - chr4_4:67672802-67672821 None:intergenic 20.0%
!!! TTATCCTCTTTCTATTTTAA+GGG - chr4_4:67672960-67672979 None:intergenic 20.0%
!!! TTTATCCTCTTTCTATTTTA+AGG - chr4_4:67672961-67672980 None:intergenic 20.0%
!! ATTCTGTATGATCAAAATAT+TGG - chr4_4:67672998-67673017 None:intergenic 20.0%
!!! TTAAACATGGTTTTCAAATT+AGG - chr4_4:67673134-67673153 None:intergenic 20.0%
!! TTTCAAAATTAATGAACTGT+GGG - chr4_4:67673229-67673248 None:intergenic 20.0%
!!! TTTTCAAAATTAATGAACTG+TGG - chr4_4:67673230-67673249 None:intergenic 20.0%
!! AATTGTAGTTCCAATTTTCT+TGG + chr4_4:67669655-67669674 Msa0697600:five_prime_UTR 25.0%
! TGATAAGTTTCCAAGAAAAT+TGG - chr4_4:67669668-67669687 None:intergenic 25.0%
!!! ATTGTTTTTTCGCTAATTCA+TGG + chr4_4:67670108-67670127 Msa0697600:intron 25.0%
! AATTCATGGTTTCTATAAAG+TGG + chr4_4:67670122-67670141 Msa0697600:intron 25.0%
! ACTTTATCCAGAAAATTCTT+CGG - chr4_4:67670241-67670260 None:intergenic 25.0%
!! TTTGTTATGGATCATACAAT+AGG - chr4_4:67670352-67670371 None:intergenic 25.0%
! ATTGTATGATCCATAACAAA+AGG + chr4_4:67670352-67670371 Msa0697600:intron 25.0%
! ATTGACTAAATTACATGTGT+CGG - chr4_4:67670431-67670450 None:intergenic 25.0%
!! GTTTGCTACATATGAATAAA+AGG + chr4_4:67670525-67670544 Msa0697600:intron 25.0%
! TTTATGTGCTCTTAAGAAAT+TGG + chr4_4:67670556-67670575 Msa0697600:intron 25.0%
!! GTCATATTTTATTCTATTCC+TGG + chr4_4:67670589-67670608 Msa0697600:intron 25.0%
!!! TTTTGTTATGATGTTCTTCA+TGG + chr4_4:67670704-67670723 Msa0697600:intron 25.0%
! TGTTATGACATCTTTCAATT+TGG - chr4_4:67671190-67671209 None:intergenic 25.0%
! AACTTGTGATCTCAATATAT+TGG + chr4_4:67671391-67671410 Msa0697600:intron 25.0%
! GTATAAGGTAATATACACAA+AGG + chr4_4:67671465-67671484 Msa0697600:intron 25.0%
! TAAGTAAAGCTTCATTGTTT+GGG - chr4_4:67671689-67671708 None:intergenic 25.0%
! ATAAGTAAAGCTTCATTGTT+TGG - chr4_4:67671690-67671709 None:intergenic 25.0%
!!! GTAAGAAATTTTAACCACTT+GGG + chr4_4:67671727-67671746 Msa0697600:intron 25.0%
!! TGTAGTGCTTAATTATGTTT+TGG + chr4_4:67672297-67672316 Msa0697600:intron 25.0%
! AAAAAAAATTGTAACCACCT+TGG + chr4_4:67672544-67672563 Msa0697600:intron 25.0%
! AGAACTTAGTTTAAAGAAAG+TGG + chr4_4:67672654-67672673 Msa0697600:intron 25.0%
! CGGAATTGTATTATAAAAAC+AGG - chr4_4:67672803-67672822 None:intergenic 25.0%
!! ATCAAAATATTGGTGCTTAT+AGG - chr4_4:67672988-67673007 None:intergenic 25.0%
! TTATGCTTTGATCATATGTT+TGG + chr4_4:67673020-67673039 Msa0697600:three_prime_UTR 25.0%
! TTCAAAATTAATGAACTGTG+GGG - chr4_4:67673228-67673247 None:intergenic 25.0%
ATGATGCTTATTCAGATCAA+TGG - chr4_4:67670215-67670234 None:intergenic 30.0%
ACCTTAAAAAACACATCAGT+GGG - chr4_4:67670295-67670314 None:intergenic 30.0%
! TCTTCTCTTTCCTTTTGTTA+TGG - chr4_4:67670365-67670384 None:intergenic 30.0%
TATCAATGATGCATATTTCC+AGG - chr4_4:67670610-67670629 None:intergenic 30.0%
CATACTATACTAGATATTGC+AGG + chr4_4:67670669-67670688 Msa0697600:intron 30.0%
! AACGTCTCTGAAAATATTCA+TGG - chr4_4:67670759-67670778 None:intergenic 30.0%
! GAATATTTTCAGAGACGTTA+TGG + chr4_4:67670760-67670779 Msa0697600:intron 30.0%
AGAAATCTCTCATACCATTT+CGG - chr4_4:67670961-67670980 None:intergenic 30.0%
AATGTATAGCTTCTTCTTCA+AGG - chr4_4:67671071-67671090 None:intergenic 30.0%
TATTTGAAGGACATTGATAG+TGG + chr4_4:67671102-67671121 Msa0697600:CDS 30.0%
TGTTGCTATACACTTTACAA+AGG + chr4_4:67671573-67671592 Msa0697600:intron 30.0%
GTTGCTATACACTTTACAAA+GGG + chr4_4:67671574-67671593 Msa0697600:intron 30.0%
! AGAAGTATATGACTACCATA+AGG + chr4_4:67671601-67671620 Msa0697600:intron 30.0%
!! GGTAAGAAATTTTAACCACT+TGG + chr4_4:67671726-67671745 Msa0697600:intron 30.0%
ATTCCAAATAACAGTGCAAA+AGG + chr4_4:67671883-67671902 Msa0697600:intron 30.0%
TTGTAATCTTAGGAAAGTAG+TGG + chr4_4:67672110-67672129 Msa0697600:intron 30.0%
TGTAATCTTAGGAAAGTAGT+GGG + chr4_4:67672111-67672130 Msa0697600:intron 30.0%
!! ATTTTAAGTGATGTTGTGGA+TGG + chr4_4:67672213-67672232 Msa0697600:intron 30.0%
!! TTTTAAGTGATGTTGTGGAT+GGG + chr4_4:67672214-67672233 Msa0697600:intron 30.0%
!! GAGTAGTTTCTGTTTTATTG+TGG + chr4_4:67672357-67672376 Msa0697600:intron 30.0%
ATAACATCACAATTCGATCT+TGG - chr4_4:67672390-67672409 None:intergenic 30.0%
!!! GTTATGCATTAGTTTTCGTT+TGG + chr4_4:67672405-67672424 Msa0697600:intron 30.0%
!! TATTGCAGTACACCTTATTT+TGG + chr4_4:67672431-67672450 Msa0697600:intron 30.0%
!!! ATTGCAGTACACCTTATTTT+GGG + chr4_4:67672432-67672451 Msa0697600:intron 30.0%
TAAGTATATGTCATCTTCCA+AGG - chr4_4:67672564-67672583 None:intergenic 30.0%
!!! GTGCTTTGATTTGTTCTTTT+AGG + chr4_4:67672601-67672620 Msa0697600:intron 30.0%
AGCATAAAACATAGCAATAC+TGG - chr4_4:67672633-67672652 None:intergenic 30.0%
!! CTATTTTAAGGGATGCTTAT+AGG - chr4_4:67672949-67672968 None:intergenic 30.0%
! ACATGGTTTTCAAATTAGGT+GGG - chr4_4:67673130-67673149 None:intergenic 30.0%
! AACATGGTTTTCAAATTAGG+TGG - chr4_4:67673131-67673150 None:intergenic 30.0%
TGTAACTCTCACATTAAACA+TGG - chr4_4:67673147-67673166 None:intergenic 30.0%
! ATAAGATCTGGAACATAACT+GGG + chr4_4:67673184-67673203 Msa0697600:three_prime_UTR 30.0%
AACTTTGACGGTTAGAATTC+CGG - chr4_4:67669767-67669786 None:intergenic 35.0%
GAATTCTAACCGTCAAAGTT+CGG + chr4_4:67669767-67669786 Msa0697600:CDS 35.0%
AACCACGTTATTCTTTGTTC+CGG - chr4_4:67669973-67669992 None:intergenic 35.0%
TTTGATTGATAAGTCTCCCA+TGG - chr4_4:67670187-67670206 None:intergenic 35.0%
!!! TCCCACTGATGTGTTTTTTA+AGG + chr4_4:67670291-67670310 Msa0697600:CDS 35.0%
CACCTTAAAAAACACATCAG+TGG - chr4_4:67670296-67670315 None:intergenic 35.0%
!!! GATGTGTTTTTTAAGGTGTG+TGG + chr4_4:67670298-67670317 Msa0697600:intron 35.0%
! AAATTACATGTGTCGGTGTA+AGG - chr4_4:67670424-67670443 None:intergenic 35.0%
! CACCACTATGCTGAAATTTT+CGG - chr4_4:67670864-67670883 None:intergenic 35.0%
CAAGTTCTACCATAGTCATT+AGG - chr4_4:67670933-67670952 None:intergenic 35.0%
GAAATGGTATGAGAGATTTC+TGG + chr4_4:67670960-67670979 Msa0697600:CDS 35.0%
ACTTTACATACTTTCCCCAA+AGG + chr4_4:67671023-67671042 Msa0697600:CDS 35.0%
TTCCTACACTGAGTATTTGA+AGG + chr4_4:67671089-67671108 Msa0697600:CDS 35.0%
TCTTTCAATTTGGCATCCTT+GGG - chr4_4:67671180-67671199 None:intergenic 35.0%
ATCTTTCAATTTGGCATCCT+TGG - chr4_4:67671181-67671200 None:intergenic 35.0%
ATTGAGATCACAAGTTCAAC+AGG - chr4_4:67671387-67671406 None:intergenic 35.0%
AAGTGCATGAGAGGAAATTA+GGG - chr4_4:67671524-67671543 None:intergenic 35.0%
ACACTACACTTTCGAATTCT+AGG - chr4_4:67671547-67671566 None:intergenic 35.0%
! AGAATTCGAAAGTGTAGTGT+AGG + chr4_4:67671547-67671566 Msa0697600:intron 35.0%
GACAACAAATGTATGCCTTA+TGG - chr4_4:67671619-67671638 None:intergenic 35.0%
!! CTTATATCCAACTTTTAGGG+AGG + chr4_4:67671705-67671724 Msa0697600:intron 35.0%
TTTCTTACCTCCCTAAAAGT+TGG - chr4_4:67671715-67671734 None:intergenic 35.0%
!! AGAAATTTTAACCACTTGGG+AGG + chr4_4:67671730-67671749 Msa0697600:intron 35.0%
!! AAGGGAGTGATATGTCATTT+TGG + chr4_4:67671807-67671826 Msa0697600:intron 35.0%
! CATCCTTTTGCACTGTTATT+TGG - chr4_4:67671889-67671908 None:intergenic 35.0%
GTAATCTTAGGAAAGTAGTG+GGG + chr4_4:67672112-67672131 Msa0697600:intron 35.0%
TAATCTTAGGAAAGTAGTGG+GGG + chr4_4:67672113-67672132 Msa0697600:intron 35.0%
ATCTTCTTAGAATCTGGGTT+TGG - chr4_4:67672175-67672194 None:intergenic 35.0%
ACTGCATCTTCTTAGAATCT+GGG - chr4_4:67672180-67672199 None:intergenic 35.0%
TTTAAGTGATGTTGTGGATG+GGG + chr4_4:67672215-67672234 Msa0697600:intron 35.0%
!!! GTACACCTTATTTTGGGTAT+TGG + chr4_4:67672438-67672457 Msa0697600:intron 35.0%
GAGATCCAATACCCAAAATA+AGG - chr4_4:67672446-67672465 None:intergenic 35.0%
GATAACGAACATGCTAAATC+AGG - chr4_4:67672710-67672729 None:intergenic 35.0%
TTCATAATAATGCTGGCCAT+TGG + chr4_4:67672761-67672780 Msa0697600:intron 35.0%
GGTTTCGTAATGCAAACTAA+AGG - chr4_4:67672928-67672947 None:intergenic 35.0%
GCATCCCTTAAAATAGAAAG+AGG + chr4_4:67672953-67672972 Msa0697600:three_prime_UTR 35.0%
ACTGTTCTCTTGATAAGATC+TGG + chr4_4:67673172-67673191 Msa0697600:three_prime_UTR 35.0%
! GATAAGATCTGGAACATAAC+TGG + chr4_4:67673183-67673202 Msa0697600:three_prime_UTR 35.0%
GCATTCAGCATTGTGTTACA+TGG + chr4_4:67669719-67669738 Msa0697600:CDS 40.0%
TTCCGGAACAAAGAATAACG+TGG + chr4_4:67669968-67669987 Msa0697600:CDS 40.0%
CCATCCTCTCTCATAATCTT+CGG - chr4_4:67670023-67670042 None:intergenic 40.0%
! TTCGTTGTTGATTGTAGCCA+TGG + chr4_4:67670167-67670186 Msa0697600:intron 40.0%
! TCGTTGTTGATTGTAGCCAT+GGG + chr4_4:67670168-67670187 Msa0697600:intron 40.0%
! TCATGTGCCGAAGAATTTTC+TGG + chr4_4:67670231-67670250 Msa0697600:CDS 40.0%
TTCTGGATAAAGTCGCTTAC+AGG + chr4_4:67670248-67670267 Msa0697600:CDS 40.0%
! GAAATTTTCGGAGTGACTTG+AGG - chr4_4:67670852-67670871 None:intergenic 40.0%
CTCCGAAAATTTCAGCATAG+TGG + chr4_4:67670859-67670878 Msa0697600:CDS 40.0%
CGAAAATTTCAGCATAGTGG+TGG + chr4_4:67670862-67670881 Msa0697600:CDS 40.0%
AATTTCAGCATAGTGGTGGT+TGG + chr4_4:67670866-67670885 Msa0697600:CDS 40.0%
ATTTCAGCATAGTGGTGGTT+GGG + chr4_4:67670867-67670886 Msa0697600:CDS 40.0%
TTGAAGAAGCAGAGAATGAG+AGG + chr4_4:67670902-67670921 Msa0697600:CDS 40.0%
TAGAACTTGTGAAGCCGAAA+TGG + chr4_4:67670944-67670963 Msa0697600:CDS 40.0%
!! ATTTCTGGTTCTTGCTGTAC+AGG + chr4_4:67670975-67670994 Msa0697600:CDS 40.0%
!! TTTCTGGTTCTTGCTGTACA+GGG + chr4_4:67670976-67670995 Msa0697600:CDS 40.0%
TTACATACTTTCCCCAAAGG+TGG + chr4_4:67671026-67671045 Msa0697600:CDS 40.0%
GTCCTTCAAATACTCAGTGT+AGG - chr4_4:67671094-67671113 None:intergenic 40.0%
CAATAGTCTATTGCAATGGC+AGG - chr4_4:67671150-67671169 None:intergenic 40.0%
CTGCCATTGCAATAGACTAT+TGG + chr4_4:67671148-67671167 Msa0697600:CDS 40.0%
CCTCCAATAGTCTATTGCAA+TGG - chr4_4:67671154-67671173 None:intergenic 40.0%
CCATTGCAATAGACTATTGG+AGG + chr4_4:67671151-67671170 Msa0697600:CDS 40.0%
AATTAGGGGAAAATGCGATC+TGG - chr4_4:67671509-67671528 None:intergenic 40.0%
AGTGCATGAGAGGAAATTAG+GGG - chr4_4:67671523-67671542 None:intergenic 40.0%
GAAGTGCATGAGAGGAAATT+AGG - chr4_4:67671525-67671544 None:intergenic 40.0%
! AATTCTAGGAAGTGCATGAG+AGG - chr4_4:67671533-67671552 None:intergenic 40.0%
GCTATACACTTTACAAAGGG+CGG + chr4_4:67671577-67671596 Msa0697600:intron 40.0%
!! ATTTTAACCACTTGGGAGGA+CGG + chr4_4:67671734-67671753 Msa0697600:intron 40.0%
!!! TGTCATTTTGGAGTGATCCA+TGG + chr4_4:67671819-67671838 Msa0697600:intron 40.0%
!!! GTCATTTTGGAGTGATCCAT+GGG + chr4_4:67671820-67671839 Msa0697600:intron 40.0%
AGTGCAAAAGGATGCTAATG+TGG + chr4_4:67671895-67671914 Msa0697600:intron 40.0%
GTGCAAAAGGATGCTAATGT+GGG + chr4_4:67671896-67671915 Msa0697600:intron 40.0%
TGCAAAAGGATGCTAATGTG+GGG + chr4_4:67671897-67671916 Msa0697600:intron 40.0%
GAGAAAGTCAATCCATTGGA+AGG + chr4_4:67671970-67671989 Msa0697600:intron 40.0%
ATCAACCGTGAGAACTTCAA+GGG + chr4_4:67672020-67672039 Msa0697600:intron 40.0%
! GCTGGTTCTCTTGTAATCTT+AGG + chr4_4:67672100-67672119 Msa0697600:intron 40.0%
TAGAATCTGGGTTTGGACTT+TGG - chr4_4:67672168-67672187 None:intergenic 40.0%
CACTGCATCTTCTTAGAATC+TGG - chr4_4:67672181-67672200 None:intergenic 40.0%
CACTGATATCGGCATCAAAT+TGG - chr4_4:67672323-67672342 None:intergenic 40.0%
CAATTTGATGCCGATATCAG+TGG + chr4_4:67672321-67672340 Msa0697600:intron 40.0%
CAAGAAACAGCCACTGATAT+CGG - chr4_4:67672334-67672353 None:intergenic 40.0%
!! ATATCAGTGGCTGTTTCTTG+AGG + chr4_4:67672334-67672353 Msa0697600:intron 40.0%
!! TATCAGTGGCTGTTTCTTGA+GGG + chr4_4:67672335-67672354 Msa0697600:intron 40.0%
!! TTTGGGTATTGGATCTCGTT+TGG + chr4_4:67672449-67672468 Msa0697600:intron 40.0%
GTATATGTCATCTTCCAAGG+TGG - chr4_4:67672561-67672580 None:intergenic 40.0%
AACGAACATGCTAAATCAGG+TGG - chr4_4:67672707-67672726 None:intergenic 40.0%
ACAATTCCGTTCTTTCATGC+AGG + chr4_4:67672814-67672833 Msa0697600:intron 40.0%
GGATATCCTGCATGAAAGAA+CGG - chr4_4:67672823-67672842 None:intergenic 40.0%
TAATGATAACCAAGAGGAGC+TGG - chr4_4:67672875-67672894 None:intergenic 40.0%
AGCTCCTCTTGGTTATCATT+AGG + chr4_4:67672874-67672893 Msa0697600:CDS 40.0%
GCTCCTCTTGGTTATCATTA+GGG + chr4_4:67672875-67672894 Msa0697600:CDS 40.0%
AAGCCCTAATGATAACCAAG+AGG - chr4_4:67672881-67672900 None:intergenic 40.0%
AAAAAGGTAAAGATACCCCG+AGG + chr4_4:67673247-67673266 Msa0697600:three_prime_UTR 40.0%
TTCTAACCGTCAAAGTTCGG+CGG + chr4_4:67669770-67669789 Msa0697600:CDS 45.0%
! GAAACGGAGGGTTCTTTTAC+TGG + chr4_4:67669850-67669869 Msa0697600:CDS 45.0%
! GAGGGTTCTTTTACTGGAAG+AGG + chr4_4:67669856-67669875 Msa0697600:CDS 45.0%
ACGTGGTTGTGTCGAGTTAT+TGG + chr4_4:67669985-67670004 Msa0697600:CDS 45.0%
CGTGGTTGTGTCGAGTTATT+GGG + chr4_4:67669986-67670005 Msa0697600:CDS 45.0%
GTGGTTGTGTCGAGTTATTG+GGG + chr4_4:67669987-67670006 Msa0697600:CDS 45.0%
TGGTTGTGTCGAGTTATTGG+GGG + chr4_4:67669988-67670007 Msa0697600:CDS 45.0%
CCGAAGATTATGAGAGAGGA+TGG + chr4_4:67670020-67670039 Msa0697600:CDS 45.0%
GTTACCATGAAGCAGTTCCA+AGG - chr4_4:67670056-67670075 None:intergenic 45.0%
GACACGACACAACATTGACA+CGG - chr4_4:67670475-67670494 None:intergenic 45.0%
GTCGTGTCTAGTGTTCATGT+TGG + chr4_4:67670487-67670506 Msa0697600:intron 45.0%
CTGTTTCGAGCATCATTGCA+CGG - chr4_4:67670789-67670808 None:intergenic 45.0%
GAGGATGCACCTAATGACTA+TGG + chr4_4:67670921-67670940 Msa0697600:CDS 45.0%
AACTCTATGAGCCACCTTTG+GGG - chr4_4:67671040-67671059 None:intergenic 45.0%
CAACTCTATGAGCCACCTTT+GGG - chr4_4:67671041-67671060 None:intergenic 45.0%
ACAACTCTATGAGCCACCTT+TGG - chr4_4:67671042-67671061 None:intergenic 45.0%
AAGGTGGCTCATAGAGTTGT+TGG + chr4_4:67671042-67671061 Msa0697600:CDS 45.0%
AGGTGGCTCATAGAGTTGTT+GGG + chr4_4:67671043-67671062 Msa0697600:CDS 45.0%
! TTTTAACCACTTGGGAGGAC+GGG + chr4_4:67671735-67671754 Msa0697600:intron 45.0%
! CTGGTTCTCTAGTAAGTGCA+GGG + chr4_4:67671772-67671791 Msa0697600:intron 45.0%
TAGTAAGTGCAGGGAAGTAG+TGG + chr4_4:67671781-67671800 Msa0697600:intron 45.0%
AGTAAGTGCAGGGAAGTAGT+GGG + chr4_4:67671782-67671801 Msa0697600:intron 45.0%
!!! TTTTGGAGTGATCCATGGGT+AGG + chr4_4:67671824-67671843 Msa0697600:intron 45.0%
! TTTGGAGTGATCCATGGGTA+GGG + chr4_4:67671825-67671844 Msa0697600:intron 45.0%
GCAAAAGGATGCTAATGTGG+GGG + chr4_4:67671898-67671917 Msa0697600:intron 45.0%
GTGTGGAACAAGTTCAGAGA+GGG + chr4_4:67671925-67671944 Msa0697600:intron 45.0%
TGTGGAACAAGTTCAGAGAG+GGG + chr4_4:67671926-67671945 Msa0697600:intron 45.0%
GGAGGAGAAAGTCAATCCAT+TGG + chr4_4:67671966-67671985 Msa0697600:intron 45.0%
GTCAATCCATTGGAAGGAGT+TGG + chr4_4:67671976-67671995 Msa0697600:intron 45.0%
CATTCACCAACTCCTTCCAA+TGG - chr4_4:67671985-67672004 None:intergenic 45.0%
GATCAACCGTGAGAACTTCA+AGG + chr4_4:67672019-67672038 Msa0697600:intron 45.0%
TCAACCGTGAGAACTTCAAG+GGG + chr4_4:67672021-67672040 Msa0697600:intron 45.0%
AGTACCCCTTGAAGTTCTCA+CGG - chr4_4:67672028-67672047 None:intergenic 45.0%
!! AGGGGTACTCAACAGACAAA+TGG + chr4_4:67672039-67672058 Msa0697600:intron 45.0%
! GGGGTACTCAACAGACAAAT+GGG + chr4_4:67672040-67672059 Msa0697600:intron 45.0%
ACTCAACAGACAAATGGGTC+TGG + chr4_4:67672045-67672064 Msa0697600:intron 45.0%
AGGAGGAGAATTAAACGAGC+TGG + chr4_4:67672082-67672101 Msa0697600:intron 45.0%
! AGGGGACTGATACGTTGTTT+TGG + chr4_4:67672136-67672155 Msa0697600:intron 45.0%
GATGTTGTGGATGGGGTTTA+TGG + chr4_4:67672222-67672241 Msa0697600:intron 45.0%
TGTGGATGGGGTTTATGGAA+TGG + chr4_4:67672227-67672246 Msa0697600:intron 45.0%
GAACACCAGTGTGAAACCAA+TGG - chr4_4:67672780-67672799 None:intergenic 45.0%
ATGCAGGATATCCACTTCCA+CGG + chr4_4:67672830-67672849 Msa0697600:intron 45.0%
ACTTCCACGGTAAAGAACTG+CGG + chr4_4:67672843-67672862 Msa0697600:CDS 45.0%
! TCTGGAACATAACTGGGTGA+AGG + chr4_4:67673190-67673209 Msa0697600:three_prime_UTR 45.0%
CTGGAACATAACTGGGTGAA+GGG + chr4_4:67673191-67673210 Msa0697600:three_prime_UTR 45.0%
TGGAACATAACTGGGTGAAG+GGG + chr4_4:67673192-67673211 Msa0697600:three_prime_UTR 45.0%
GCTTCATCTTTCGAGAGCGA+AGG - chr4_4:67669701-67669720 None:intergenic 50.0%
TCACAACCGCCGAACTTTGA+CGG - chr4_4:67669779-67669798 None:intergenic 50.0%
GACGGAGAAGAACGAGAAGA+AGG + chr4_4:67669938-67669957 Msa0697600:CDS 50.0%
GGAGAAGAACGAGAAGAAGG+AGG + chr4_4:67669941-67669960 Msa0697600:CDS 50.0%
GAGAAGAAGGAGGAGAGTTC+CGG + chr4_4:67669951-67669970 Msa0697600:CDS 50.0%
CGAGTTATTGGGGGATTTCG+AGG + chr4_4:67669997-67670016 Msa0697600:CDS 50.0%
GAGGCCGAAGATTATGAGAG+AGG + chr4_4:67670016-67670035 Msa0697600:CDS 50.0%
TGAGAGAGGATGGAACAGAG+TGG + chr4_4:67670030-67670049 Msa0697600:CDS 50.0%
TAAGTGTTCTCTGTCGCACG+AGG + chr4_4:67670387-67670406 Msa0697600:intron 50.0%
TCTATTGCAATGGCAGGAGC+AGG - chr4_4:67671144-67671163 None:intergenic 50.0%
AGACTATTGGAGGCTTCCCA+AGG + chr4_4:67671161-67671180 Msa0697600:CDS 50.0%
! AACAGTCATTCGCGCTGATG+AGG + chr4_4:67671206-67671225 Msa0697600:CDS 50.0%
GAACACTCACTGAAGCGAAG+TGG - chr4_4:67671251-67671270 None:intergenic 50.0%
TTTAACCACTTGGGAGGACG+GGG + chr4_4:67671736-67671755 Msa0697600:intron 50.0%
! GCTGGTTCTCTAGTAAGTGC+AGG + chr4_4:67671771-67671790 Msa0697600:intron 50.0%
GTAAGTGCAGGGAAGTAGTG+GGG + chr4_4:67671783-67671802 Msa0697600:intron 50.0%
TAAGTGCAGGGAAGTAGTGG+GGG + chr4_4:67671784-67671803 Msa0697600:intron 50.0%
AAAGGATGCTAATGTGGGGG+AGG + chr4_4:67671901-67671920 Msa0697600:intron 50.0%
CGTGTGGAACAAGTTCAGAG+AGG + chr4_4:67671924-67671943 Msa0697600:intron 50.0%
ACAAGTTCAGAGAGGGGTGA+AGG + chr4_4:67671932-67671951 Msa0697600:intron 50.0%
AGAGAGGGGTGAAGGAAAGT+GGG + chr4_4:67671940-67671959 Msa0697600:intron 50.0%
GTGAAGGAAAGTGGGATTGG+AGG + chr4_4:67671948-67671967 Msa0697600:intron 50.0%
! TCTTAGGAAAGTAGTGGGGG+AGG + chr4_4:67672116-67672135 Msa0697600:intron 50.0%
! CTTAGGAAAGTAGTGGGGGA+GGG + chr4_4:67672117-67672136 Msa0697600:intron 50.0%
! TTAGGAAAGTAGTGGGGGAG+GGG + chr4_4:67672118-67672137 Msa0697600:intron 50.0%
!! GGGTATTGGATCTCGTTTGG+AGG + chr4_4:67672452-67672471 Msa0697600:intron 50.0%
GCAGTTCTTTACCGTGGAAG+TGG - chr4_4:67672844-67672863 None:intergenic 50.0%
CTTCCACGGTAAAGAACTGC+GGG + chr4_4:67672844-67672863 Msa0697600:CDS 50.0%
! ATGGCTCGCCGAGCTTTGAT+CGG + chr4_4:67669738-67669757 Msa0697600:CDS 55.0%
GTCAAAGTTCGGCGGTTGTG+AGG + chr4_4:67669778-67669797 Msa0697600:CDS 55.0%
TCTTCCGCTGATGGCTTCGA+CGG - chr4_4:67669903-67669922 None:intergenic 55.0%
GAAGCCATCAGCGGAAGAGA+CGG + chr4_4:67669905-67669924 Msa0697600:CDS 55.0%
AGAGACGGAGGCGAAATCGA+CGG + chr4_4:67669920-67669939 Msa0697600:CDS 55.0%
AGGATGGAACAGAGTGGCCT+TGG + chr4_4:67670036-67670055 Msa0697600:CDS 55.0%
! GTGGCCTTGGAACTGCTTCA+TGG + chr4_4:67670049-67670068 Msa0697600:CDS 55.0%
TGACACGGACACGATGACAC+CGG - chr4_4:67670460-67670479 None:intergenic 55.0%
GAAACAGTTGCAGCTGTCCC+TGG + chr4_4:67670802-67670821 Msa0697600:CDS 55.0%
AGTTGCAGCTGTCCCTGGAA+TGG + chr4_4:67670807-67670826 Msa0697600:CDS 55.0%
CTGTCCCTGGAATGGTTGGA+GGG + chr4_4:67670815-67670834 Msa0697600:CDS 55.0%
GCATCCCTCCAACCATTCCA+GGG - chr4_4:67670822-67670841 None:intergenic 55.0%
AGCATCCCTCCAACCATTCC+AGG - chr4_4:67670823-67670842 None:intergenic 55.0%
CGAAGTGGTTCACATCCCGA+TGG - chr4_4:67671236-67671255 None:intergenic 55.0%
ACGGGGAGAGTCAAACAAGC+TGG + chr4_4:67671753-67671772 Msa0697600:intron 55.0%
AGTGATCCATGGGTAGGGCA+AGG + chr4_4:67671830-67671849 Msa0697600:intron 55.0%
GTGATCCATGGGTAGGGCAA+GGG + chr4_4:67671831-67671850 Msa0697600:intron 55.0%
TGATCCATGGGTAGGGCAAG+GGG + chr4_4:67671832-67671851 Msa0697600:intron 55.0%
CAGAGAGGGGTGAAGGAAAG+TGG + chr4_4:67671939-67671958 Msa0697600:intron 55.0%
GGGGTGAAGGAAAGTGGGAT+TGG + chr4_4:67671945-67671964 Msa0697600:intron 55.0%
CAGACAAATGGGTCTGGCTG+CGG + chr4_4:67672051-67672070 Msa0697600:intron 55.0%
AGACAAATGGGTCTGGCTGC+GGG + chr4_4:67672052-67672071 Msa0697600:intron 55.0%
!! GCTGGCCATTGGTTTCACAC+TGG + chr4_4:67672772-67672791 Msa0697600:intron 55.0%
TCCGGCCACCGATCAAAGCT+CGG - chr4_4:67669749-67669768 None:intergenic 60.0%
GGCGGTTGTGAGGTCATTCG+CGG + chr4_4:67669788-67669807 Msa0697600:CDS 60.0%
GGTTGTGAGGTCATTCGCGG+CGG + chr4_4:67669791-67669810 Msa0697600:CDS 60.0%
TCATTCGCGGCGGCGGAAAT+CGG + chr4_4:67669801-67669820 Msa0697600:CDS 60.0%
CATCGGCGTAGAGATGCCTC+TGG - chr4_4:67669827-67669846 None:intergenic 60.0%
!! CAGAGGCATCTCTACGCCGA+TGG + chr4_4:67669825-67669844 Msa0697600:CDS 60.0%
AGGCATCTCTACGCCGATGG+CGG + chr4_4:67669828-67669847 Msa0697600:CDS 60.0%
!! CTCTACGCCGATGGCGGAAA+CGG + chr4_4:67669834-67669853 Msa0697600:CDS 60.0%
GAACCCTCCGTTTCCGCCAT+CGG - chr4_4:67669844-67669863 None:intergenic 60.0%
TCTGTCGCACGAGGCGTGTA+TGG + chr4_4:67670396-67670415 Msa0697600:intron 60.0%
GCAGCTGTCCCTGGAATGGT+TGG + chr4_4:67670811-67670830 Msa0697600:CDS 60.0%
GCTGTCCCTGGAATGGTTGG+AGG + chr4_4:67670814-67670833 Msa0697600:CDS 60.0%
! GCGCTGATGAGGCTCACCAT+CGG + chr4_4:67671217-67671236 Msa0697600:CDS 60.0%
CGCTGATGAGGCTCACCATC+GGG + chr4_4:67671218-67671237 Msa0697600:CDS 60.0%
! TGCAGGGAAGTAGTGGGGGA+AGG + chr4_4:67671788-67671807 Msa0697600:intron 60.0%
! GCAGGGAAGTAGTGGGGGAA+GGG + chr4_4:67671789-67671808 Msa0697600:intron 60.0%
ATCTCCCCTTGCCCTACCCA+TGG - chr4_4:67671839-67671858 None:intergenic 60.0%
CGTCCCGCAGTTCTTTACCG+TGG - chr4_4:67672850-67672869 None:intergenic 60.0%
! GCTCGCCGAGCTTTGATCGG+TGG + chr4_4:67669741-67669760 Msa0697600:CDS 65.0%
! GCCGAGCTTTGATCGGTGGC+CGG + chr4_4:67669745-67669764 Msa0697600:CDS 65.0%
TGTGAGGTCATTCGCGGCGG+CGG + chr4_4:67669794-67669813 Msa0697600:CDS 65.0%
!! TACGCCGATGGCGGAAACGG+AGG + chr4_4:67669837-67669856 Msa0697600:CDS 65.0%
!! ACGCCGATGGCGGAAACGGA+GGG + chr4_4:67669838-67669857 Msa0697600:CDS 65.0%
TGCGCCGTCGAAGCCATCAG+CGG + chr4_4:67669896-67669915 Msa0697600:CDS 65.0%
GCCATCAGCGGAAGAGACGG+AGG + chr4_4:67669908-67669927 Msa0697600:CDS 65.0%
GCCTCCGTCTCTTCCGCTGA+TGG - chr4_4:67669912-67669931 None:intergenic 65.0%
ACTCTCCCCGTCCTCCCAAG+TGG - chr4_4:67671744-67671763 None:intergenic 65.0%
! GCTAATGTGGGGGAGGCGTG+TGG + chr4_4:67671908-67671927 Msa0697600:intron 65.0%
ATGGGTCTGGCTGCGGGTGA+AGG + chr4_4:67672058-67672077 Msa0697600:intron 65.0%
TGGGTCTGGCTGCGGGTGAA+GGG + chr4_4:67672059-67672078 Msa0697600:intron 65.0%
GTCTGGCTGCGGGTGAAGGG+AGG + chr4_4:67672062-67672081 Msa0697600:intron 70.0%
TGGCTGCGGGTGAAGGGAGG+AGG + chr4_4:67672065-67672084 Msa0697600:intron 70.0%
CGGGACGCACCAGCTCCTCT+TGG + chr4_4:67672863-67672882 Msa0697600:CDS 70.0%
CGGCGGCGGAAATCGGCCAG+AGG + chr4_4:67669808-67669827 Msa0697600:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 67669638 67673270 67669638 ID=Msa0697600;Name=Msa0697600
chr4_4 mRNA 67669638 67673270 67669638 ID=Msa0697600-mRNA-1;Parent=Msa0697600;Name=Msa0697600-mRNA-1;_AED=0.04;_eAED=0.04;_QI=76|1|1|1|1|1|4|375|344
chr4_4 exon 67669638 67670070 67669638 ID=Msa0697600-mRNA-1:exon:19918;Parent=Msa0697600-mRNA-1
chr4_4 exon 67670184 67670312 67670184 ID=Msa0697600-mRNA-1:exon:19919;Parent=Msa0697600-mRNA-1
chr4_4 exon 67670772 67671260 67670772 ID=Msa0697600-mRNA-1:exon:19920;Parent=Msa0697600-mRNA-1
chr4_4 exon 67672836 67673270 67672836 ID=Msa0697600-mRNA-1:exon:19921;Parent=Msa0697600-mRNA-1
chr4_4 five_prime_UTR 67669638 67669713 67669638 ID=Msa0697600-mRNA-1:five_prime_utr;Parent=Msa0697600-mRNA-1
chr4_4 CDS 67669714 67670070 67669714 ID=Msa0697600-mRNA-1:cds;Parent=Msa0697600-mRNA-1
chr4_4 CDS 67670184 67670312 67670184 ID=Msa0697600-mRNA-1:cds;Parent=Msa0697600-mRNA-1
chr4_4 CDS 67670772 67671260 67670772 ID=Msa0697600-mRNA-1:cds;Parent=Msa0697600-mRNA-1
chr4_4 CDS 67672836 67672895 67672836 ID=Msa0697600-mRNA-1:cds;Parent=Msa0697600-mRNA-1
chr4_4 three_prime_UTR 67672896 67673270 67672896 ID=Msa0697600-mRNA-1:three_prime_utr;Parent=Msa0697600-mRNA-1
Gene Sequence

>Msa0697600

ATGAAGCATTCAGCATTGTGTTACATGGCTCGCCGAGCTTTGATCGGTGGCCGGAATTCTAACCGTCAAAGTTCGGCGGTTGTGAGGTCATTCGCGGCGGCGGAAATCGGCCAGAGGCATCTCTACGCCGATGGCGGAAACGGAGGGTTCTTTTACTGGAAGAGGATGATGTCTTCGCAAGCTGCGCCGTCGAAGCCATCAGCGGAAGAGACGGAGGCGAAATCGACGGAGAAGAACGAGAAGAAGGAGGAGAGTTCCGGAACAAAGAATAACGTGGTTGTGTCGAGTTATTGGGGGATTTCGAGGCCGAAGATTATGAGAGAGGATGGAACAGAGTGGCCTTGGAACTGCTTCATGCCATGGGAGACTTATCAATCAAACGTTTCCATTGATCTGAATAAGCATCATGTGCCGAAGAATTTTCTGGATAAAGTCGCTTACAGGACAGTGAAGCTTCTCAGAATTCCCACTGATGTGTTTTTTAAGAGACGTTATGGTTGCCGTGCAATGATGCTCGAAACAGTTGCAGCTGTCCCTGGAATGGTTGGAGGGATGCTGTTGCACCTCAAGTCACTCCGAAAATTTCAGCATAGTGGTGGTTGGGTCAAAGCATTGCTTGAAGAAGCAGAGAATGAGAGGATGCACCTAATGACTATGGTAGAACTTGTGAAGCCGAAATGGTATGAGAGATTTCTGGTTCTTGCTGTACAGGGAGTTTTCTTCAATGCATTCTTTGTACTTTACATACTTTCCCCAAAGGTGGCTCATAGAGTTGTTGGGTACCTTGAAGAAGAAGCTATACATTCCTACACTGAGTATTTGAAGGACATTGATAGTGGTGCAATTGAAAATGTTCCTGCTCCTGCCATTGCAATAGACTATTGGAGGCTTCCCAAGGATGCCAAATTGAAAGATGTCATAACAGTCATTCGCGCTGATGAGGCTCACCATCGGGATGTGAACCACTTCGCTTCAGATATCCACTTCCACGGTAAAGAACTGCGGGACGCACCAGCTCCTCTTGGTTATCATTAG

Protein sequence

>Msa0697600

MKHSALCYMARRALIGGRNSNRQSSAVVRSFAAAEIGQRHLYADGGNGGFFYWKRMMSSQAAPSKPSAEETEAKSTEKNEKKEESSGTKNNVVVSSYWGISRPKIMREDGTEWPWNCFMPWETYQSNVSIDLNKHHVPKNFLDKVAYRTVKLLRIPTDVFFKRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRKFQHSGGWVKALLEEAENERMHLMTMVELVKPKWYERFLVLAVQGVFFNAFFVLYILSPKVAHRVVGYLEEEAIHSYTEYLKDIDSGAIENVPAPAIAIDYWRLPKDAKLKDVITVIRADEAHHRDVNHFASDIHFHGKELRDAPAPLGYH*