AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1103620


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1103620 MtrunA17_Chr7g0234131 90.291 206 20 0 4 209 333 538 3.76e-136 392
Msa1103620 MtrunA17_Chr7g0234091 80.296 203 39 1 4 206 333 534 2.90e-113 333
Msa1103620 MtrunA17_Chr7g0234111 79.803 203 40 1 4 206 333 534 9.90e-113 332
Msa1103620 MtrunA17_Chr7g0230651 60.959 146 51 2 4 149 236 375 4.74e-55 179
Msa1103620 MtrunA17_Chr4g0033191 41.951 205 113 2 4 203 314 517 6.23e-47 161
Msa1103620 MtrunA17_Chr4g0033331 42.105 209 115 2 4 207 310 517 1.50e-46 160
Msa1103620 MtrunA17_Chr4g0033201 41.463 205 114 2 4 203 307 510 3.80e-46 159
Msa1103620 MtrunA17_Chr4g0033271 41.748 206 112 3 4 203 306 509 6.24e-46 158
Msa1103620 MtrunA17_Chr6g0482081 42.233 206 112 3 4 203 307 511 1.12e-45 158
Msa1103620 MtrunA17_Chr6g0482131 40.000 205 117 2 4 203 307 510 8.46e-45 155
Msa1103620 MtrunA17_Chr4g0033311 41.463 205 114 2 4 203 310 513 1.34e-44 155
Msa1103620 MtrunA17_Chr5g0430451 41.262 206 113 3 4 203 293 496 3.59e-44 154
Msa1103620 MtrunA17_Chr4g0033401 40.865 208 117 2 4 206 305 511 3.68e-44 154
Msa1103620 MtrunA17_Chr2g0329321 39.614 207 115 3 4 203 283 486 1.05e-43 152
Msa1103620 MtrunA17_Chr3g0088441 40.976 205 115 2 4 203 309 512 1.42e-43 152
Msa1103620 MtrunA17_Chr2g0329191 40.000 205 117 2 4 203 304 507 2.97e-43 151
Msa1103620 MtrunA17_Chr2g0329201 41.262 206 113 3 4 203 302 505 2.49e-42 149
Msa1103620 MtrunA17_Chr6g0482071 39.512 205 118 2 4 203 308 511 3.01e-42 149
Msa1103620 MtrunA17_Chr4g0033321 39.320 206 119 2 4 204 304 508 1.66e-41 147
Msa1103620 MtrunA17_Chr4g0043091 36.967 211 117 4 4 203 296 501 3.18e-41 145
Msa1103620 MtrunA17_Chr3g0087201 38.308 201 121 2 4 203 144 342 2.56e-40 140
Msa1103620 MtrunA17_Chr2g0301231 40.566 212 112 7 3 203 182 390 2.41e-39 139
Msa1103620 MtrunA17_Chr4g0033341 39.024 205 119 2 4 203 338 541 4.78e-39 140
Msa1103620 MtrunA17_Chr4g0042171 35.681 213 126 4 4 207 292 502 3.44e-37 135
Msa1103620 MtrunA17_Chr3g0090111 34.466 206 125 4 4 203 278 479 1.24e-36 133
Msa1103620 MtrunA17_Chr4g0033261 37.198 207 124 2 3 203 285 491 1.43e-36 133
Msa1103620 MtrunA17_Chr3g0087271 38.049 205 120 4 4 203 306 508 2.22e-36 133
Msa1103620 MtrunA17_Chr4g0033231 35.749 207 127 2 3 203 285 491 2.48e-36 132
Msa1103620 MtrunA17_Chr2g0288071 35.407 209 124 5 4 204 336 541 7.14e-36 132
Msa1103620 MtrunA17_Chr7g0236731 86.957 69 9 0 4 72 205 273 8.65e-36 127
Msa1103620 MtrunA17_Chr3g0090131 34.951 206 125 4 4 203 280 482 1.30e-35 130
Msa1103620 MtrunA17_Chr4g0010501 36.634 202 123 4 4 203 294 492 2.38e-35 130
Msa1103620 MtrunA17_Chr7g0236741 91.667 60 5 0 150 209 9 68 4.05e-35 119
Msa1103620 MtrunA17_Chr4g0006131 35.321 218 121 6 3 203 285 499 3.16e-34 127
Msa1103620 MtrunA17_Chr3g0087261 35.610 205 125 2 4 203 305 507 5.55e-34 126
Msa1103620 MtrunA17_Chr4g0074551 34.466 206 128 3 4 203 318 522 7.42e-34 126
Msa1103620 MtrunA17_Chr6g0482951 35.294 204 127 3 4 204 310 511 3.06e-33 124
Msa1103620 MtrunA17_Chr7g0242681 38.308 201 116 5 4 203 306 499 6.31e-33 124
Msa1103620 MtrunA17_Chr4g0074561 34.286 210 123 4 4 203 306 510 1.24e-32 123
Msa1103620 MtrunA17_Chr6g0482941 35.577 208 121 4 4 204 310 511 2.84e-32 122
Msa1103620 MtrunA17_Chr2g0317841 36.967 211 115 7 4 203 300 503 5.05e-32 121
Msa1103620 MtrunA17_Chr2g0317821 37.441 211 114 7 4 203 300 503 5.63e-32 121
Msa1103620 MtrunA17_Chr7g0242691 35.323 201 123 4 4 203 299 493 7.99e-32 120
Msa1103620 MtrunA17_Chr4g0006111 35.160 219 120 7 3 203 309 523 8.97e-32 120
Msa1103620 MtrunA17_Chr5g0428831 37.198 207 111 5 4 203 294 488 3.94e-31 118
Msa1103620 MtrunA17_Chr2g0288021 32.692 208 131 4 4 204 303 508 1.01e-30 117
Msa1103620 MtrunA17_Chr4g0006971 35.714 210 123 5 4 208 295 497 2.46e-29 114
Msa1103620 MtrunA17_Chr1g0195611 36.715 207 111 6 4 203 294 487 8.79e-29 112
Msa1103620 MtrunA17_Chr7g0227581 74.138 58 15 0 14 71 1 58 1.24e-24 92.4
Msa1103620 MtrunA17_Chr7g0227591 67.273 55 18 0 150 204 12 66 3.97e-21 83.2
Msa1103620 MtrunA17_Chr5g0418861 36.471 85 53 1 121 204 7 91 2.52e-15 68.6
Msa1103620 MtrunA17_Chr8g0352881 47.368 57 30 0 4 60 102 158 2.46e-12 62.4
Msa1103620 MtrunA17_Chr1g0195641 39.837 123 56 4 4 120 294 404 2.81e-12 64.7
Msa1103620 MtrunA17_Chr4g0068871 30.286 175 88 4 38 208 393 537 1.00e-11 63.5
Msa1103620 MtrunA17_Chr5g0418871 53.061 49 23 0 4 52 251 299 2.38e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1103620 AT2G44460.2 40.385 208 118 2 4 205 153 360 6.22e-46 157
Msa1103620 AT2G44460.1 40.385 208 118 2 4 205 299 506 5.75e-45 157
Msa1103620 AT2G44480.5 38.756 209 122 2 4 207 99 306 2.40e-43 147
Msa1103620 AT2G44490.1 39.623 212 120 2 4 207 285 496 4.38e-43 152
Msa1103620 AT2G44470.3 39.614 207 119 2 4 204 300 506 4.77e-43 152
Msa1103620 AT3G60140.1 38.756 209 116 3 4 203 297 502 8.17e-43 151
Msa1103620 AT2G44480.2 38.756 209 122 2 4 207 203 410 2.37e-42 147
Msa1103620 AT2G44480.1 38.756 209 122 2 4 207 305 512 1.49e-41 147
Msa1103620 AT2G44480.3 38.756 209 122 2 4 207 336 543 1.96e-41 147
Msa1103620 AT1G51470.1 39.130 207 114 4 4 204 310 510 5.64e-40 143
Msa1103620 AT5G24550.1 39.130 207 119 3 4 203 303 509 6.43e-40 143
Msa1103620 AT1G47600.2 37.864 206 117 3 4 204 310 509 7.14e-40 142
Msa1103620 AT5G24540.1 38.647 207 120 3 4 203 303 509 1.81e-39 142
Msa1103620 AT1G47600.1 37.089 213 110 4 4 204 310 510 3.28e-39 141
Msa1103620 AT3G60120.1 38.350 206 121 3 4 203 284 489 3.68e-39 141
Msa1103620 AT5G36890.2 37.143 210 123 4 4 206 275 482 1.16e-38 139
Msa1103620 AT2G44450.2 38.308 201 121 2 4 203 151 349 1.21e-38 136
Msa1103620 AT5G36890.1 37.143 210 123 4 4 206 275 482 1.32e-38 139
Msa1103620 AT3G60130.2 40.099 202 117 4 4 203 249 448 1.40e-38 138
Msa1103620 AT3G09260.1 38.424 203 119 2 8 204 309 511 2.79e-38 138
Msa1103620 AT3G60130.1 40.099 202 117 4 4 203 301 500 4.07e-38 138
Msa1103620 AT1G66280.1 38.835 206 120 2 4 203 305 510 9.79e-38 137
Msa1103620 AT5G44640.1 37.931 203 122 3 4 204 302 502 1.61e-37 136
Msa1103620 AT2G44450.1 38.308 201 121 2 4 203 302 500 1.86e-37 136
Msa1103620 AT1G75940.1 37.838 222 102 5 4 203 310 517 2.66e-37 136
Msa1103620 AT3G21370.1 37.981 208 121 3 4 203 304 511 4.09e-37 135
Msa1103620 AT1G66270.1 38.164 207 122 2 4 204 305 511 6.08e-37 135
Msa1103620 AT1G66270.2 38.164 207 122 2 4 204 303 509 6.53e-37 135
Msa1103620 AT4G27830.2 38.679 212 107 6 1 203 199 396 9.17e-37 133
Msa1103620 AT3G03640.1 38.278 209 117 3 4 203 307 512 9.81e-37 134
Msa1103620 AT4G27820.2 37.198 207 118 5 1 203 199 397 1.14e-36 132
Msa1103620 AT4G27820.3 37.198 207 118 5 1 203 199 397 1.14e-36 132
Msa1103620 AT3G60130.3 39.604 202 107 5 4 203 249 437 1.39e-36 133
Msa1103620 AT5G28510.1 36.946 203 122 2 8 204 318 520 3.09e-36 133
Msa1103620 AT4G27830.1 38.679 212 107 6 1 203 287 484 3.16e-36 132
Msa1103620 AT4G27820.1 37.198 207 118 5 1 203 284 482 3.95e-36 132
Msa1103620 AT1G26560.1 35.681 213 126 5 4 207 300 510 5.27e-36 132
Msa1103620 AT5G54570.2 33.971 209 127 4 4 203 202 408 1.05e-35 130
Msa1103620 AT5G25980.2 37.379 206 122 4 4 203 318 522 2.32e-35 130
Msa1103620 AT5G54570.1 33.971 209 127 4 4 203 299 505 2.84e-35 130
Msa1103620 AT1G52400.3 37.681 207 121 3 4 203 310 515 3.65e-35 130
Msa1103620 AT1G52400.1 37.681 207 121 3 4 203 310 515 3.65e-35 130
Msa1103620 AT5G42260.1 37.879 198 119 3 4 199 302 497 1.25e-34 128
Msa1103620 AT1G61820.3 34.123 211 123 5 4 203 160 365 5.30e-34 125
Msa1103620 AT1G02850.1 36.318 201 120 5 4 203 265 458 8.82e-34 125
Msa1103620 AT1G02850.2 36.318 201 120 5 4 203 292 485 1.07e-33 125
Msa1103620 AT1G02850.5 36.318 201 120 5 4 203 315 508 1.22e-33 126
Msa1103620 AT3G18070.7 33.816 207 133 2 4 207 106 311 1.26e-33 122
Msa1103620 AT3G62750.6 36.893 206 120 4 1 203 190 388 1.50e-33 124
Msa1103620 AT3G62750.5 36.893 206 120 4 1 203 190 388 1.50e-33 124
Msa1103620 AT3G62740.1 35.610 205 123 4 1 203 281 478 1.55e-33 125
Msa1103620 AT3G18080.1 36.842 209 116 6 4 203 306 507 1.94e-33 125
Msa1103620 AT5G26000.1 35.238 210 125 5 4 205 307 513 3.30e-33 125
Msa1103620 AT1G61820.1 34.123 211 123 5 4 203 299 504 3.51e-33 124
Msa1103620 AT3G62750.1 36.893 206 120 4 1 203 275 473 4.48e-33 124
Msa1103620 AT1G61810.5 34.783 207 127 4 4 203 202 407 4.63e-33 123
Msa1103620 AT3G62750.2 36.893 206 120 4 1 203 301 499 4.79e-33 124
Msa1103620 AT3G18070.2 33.816 207 133 2 4 207 218 423 1.02e-32 122
Msa1103620 AT4G21760.2 34.615 208 120 4 4 203 322 521 1.04e-32 123
Msa1103620 AT1G61810.1 34.783 207 127 4 4 203 302 507 1.39e-32 123
Msa1103620 AT3G18070.3 33.816 207 133 2 4 207 289 494 2.01e-32 122
Msa1103620 AT3G18070.1 33.816 207 133 2 4 207 295 500 2.21e-32 122
Msa1103620 AT1G02850.4 36.139 202 120 6 4 203 315 509 3.29e-32 122
Msa1103620 AT1G45191.4 34.653 202 120 4 4 203 292 483 7.66e-32 120
Msa1103620 AT2G25630.1 37.129 202 106 5 4 203 301 483 2.46e-31 119
Msa1103620 AT4G22100.1 37.198 207 120 6 1 203 282 482 1.07e-30 117
Msa1103620 AT1G45191.2 33.019 212 122 4 1 203 289 489 1.56e-30 117
Msa1103620 AT1G45191.6 32.258 217 122 4 1 203 289 494 8.56e-30 115
Msa1103620 AT1G45191.1 32.258 217 122 4 1 203 301 506 8.86e-30 115
Msa1103620 AT4G21760.1 33.659 205 116 4 4 203 322 511 2.33e-29 114
Msa1103620 AT1G60090.2 34.928 209 124 7 4 208 287 487 3.23e-29 113
Msa1103620 AT2G32860.2 33.803 213 121 6 4 203 366 571 3.29e-29 114
Msa1103620 AT2G32860.1 33.816 207 127 4 4 203 367 570 9.24e-29 113
Msa1103620 AT1G61810.3 34.536 194 119 4 4 190 302 494 1.08e-28 112
Msa1103620 AT1G60090.1 32.258 217 126 6 4 208 287 494 1.21e-27 109
Msa1103620 AT5G16580.1 36.709 158 93 3 4 160 148 299 6.98e-24 96.7
Msa1103620 AT5G48375.1 34.783 184 82 5 4 182 275 425 2.98e-23 96.7
Msa1103620 AT2G44470.1 38.411 151 88 1 4 149 300 450 3.08e-23 96.7
Msa1103620 AT5G24540.2 38.158 152 88 2 4 149 303 454 1.02e-21 92.4
Msa1103620 AT5G25980.3 36.667 150 90 2 4 149 318 466 1.25e-21 92.4
Msa1103620 AT5G25980.1 36.667 150 90 2 4 149 318 466 1.25e-21 92.4
Msa1103620 AT3G60140.2 39.655 116 70 0 4 119 297 412 1.75e-21 91.7
Msa1103620 AT3G62740.2 36.000 150 88 3 1 149 281 423 6.37e-21 90.1
Msa1103620 AT5G26000.2 35.172 145 85 3 4 142 307 448 4.47e-19 85.1
Msa1103620 AT5G54570.3 32.468 154 94 3 4 149 299 450 4.81e-19 84.7
Msa1103620 AT3G62750.4 36.364 154 89 3 1 152 301 447 9.95e-19 84.0
Msa1103620 AT1G52400.2 36.184 152 90 2 4 149 310 460 1.58e-18 83.6
Msa1103620 AT3G18070.6 35.043 117 76 0 4 120 106 222 6.24e-16 73.9
Msa1103620 AT1G02850.3 37.069 116 67 3 4 119 315 424 7.12e-16 75.9
Msa1103620 AT3G18070.5 35.043 117 76 0 4 120 218 334 1.71e-15 74.3
Msa1103620 AT3G06510.2 31.609 174 95 5 38 195 370 535 7.82e-13 67.0
Msa1103620 AT3G06510.1 31.481 162 77 4 38 195 370 501 7.54e-12 64.3
Msa1103620 AT2G44470.2 48.276 58 30 0 4 61 300 357 8.27e-11 60.8

Find 120 sgRNAs with CRISPR-Local

Find 582 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATGTCTTACCTGGAATT+TGG 0.151480 7_3:+39712942 None:intergenic
GGATTAATCTTGGTTCTATT+TGG 0.177781 7_3:+39712183 None:intergenic
TGACTTTCAAATAAATAAAT+TGG 0.239419 7_3:-39710108 Msa1103620:three_prime_UTR
TTTCTCATTTGTTGTGAATT+CGG 0.243291 7_3:+39712275 None:intergenic
TGTTCGTCTTTCAATGGATT+TGG 0.245425 7_3:+39711537 None:intergenic
TGTATAGATGGAACCTTAAA+AGG 0.256228 7_3:-39713590 Msa1103620:intron
AGAATCTACATCACTGAAAA+TGG 0.258729 7_3:-39711685 Msa1103620:intron
GCAGTTCAAGAGGGAGAAAT+TGG 0.283757 7_3:-39712641 Msa1103620:five_prime_UTR
AATAATTTGTAGGACCAATA+TGG 0.300027 7_3:-39711778 Msa1103620:intron
AAGACCAGCGTAATTCAAAT+TGG 0.302981 7_3:-39718341 Msa1103620:five_prime_UTR
AAAGGAAGTACAGACTTTAT+TGG 0.307324 7_3:-39712243 Msa1103620:CDS
TTCTCATTTGTTGTGAATTC+GGG 0.312449 7_3:+39712276 None:intergenic
GTTCGTCTTTCAATGGATTT+GGG 0.327576 7_3:+39711538 None:intergenic
AACTTACTTAATTGCTGCTT+TGG 0.329115 7_3:+39711479 None:intergenic
TTATACATAGCTTGGAGTTC+CGG 0.337255 7_3:+39713090 None:intergenic
TACTGACAAACACAGCTAAA+TGG 0.340167 7_3:-39710401 Msa1103620:CDS
CAATGGATATTCTAAACATA+TGG 0.345398 7_3:-39710463 Msa1103620:CDS
AAGGAAGTACAGACTTTATT+GGG 0.346048 7_3:-39712242 Msa1103620:CDS
CTAAATGTTCTTATGTTGAT+TGG 0.348569 7_3:-39710346 Msa1103620:exon
TATAATAATCAAACATAAAG+TGG 0.352114 7_3:+39710292 None:intergenic
TCTAAATACCATACAGTTCA+TGG 0.358433 7_3:+39710003 None:intergenic
TATAATTACATGGGAAATCT+AGG 0.368126 7_3:-39713072 Msa1103620:five_prime_UTR
CTAGCTCTTCAACAAAATAT+TGG 0.370714 7_3:-39713349 Msa1103620:five_prime_UTR
TAACAAGCAGAAGCTTATTC+CGG 0.376269 7_3:-39716824 Msa1103620:intron
AAATAAATAAATTGGTTCAA+TGG 0.379265 7_3:-39710100 Msa1103620:three_prime_UTR
ATTGTCAATAGGATTAATCT+TGG 0.383120 7_3:+39712173 None:intergenic
ACAATATATTAGTTGGTCAT+TGG 0.391567 7_3:+39710228 None:intergenic
AAAGACTAACAGATTTCAAA+TGG 0.396482 7_3:-39712553 Msa1103620:exon
ATCCTGAGGCTTGGAACTAT+AGG 0.402618 7_3:+39712589 None:intergenic
CACTAGTAACATTGTGTAGT+TGG 0.402750 7_3:-39719964 Msa1103620:five_prime_UTR
TGAGCATTGCAAGAGATATA+AGG 0.413944 7_3:-39716777 Msa1103620:intron
GGTCTCTCAACTTGGAGAAA+TGG 0.420193 7_3:-39710325 Msa1103620:three_prime_UTR
AAGGCATCAAAATTGTCAAT+AGG 0.422397 7_3:+39712162 None:intergenic
GTTATACAAATCCAAATTCC+AGG 0.422977 7_3:-39712953 Msa1103620:intron
GTTCGATGTTCGTCTTTCAA+TGG 0.424862 7_3:+39711531 None:intergenic
AAGACATTATATAATCCTTC+GGG 0.425230 7_3:+39711739 None:intergenic
CCATGTAATTATACATAGCT+TGG 0.425885 7_3:+39713082 None:intergenic
CAAGACATTATATAATCCTT+CGG 0.426983 7_3:+39711738 None:intergenic
TATTACTCTGCTCCAACATA+TGG 0.427015 7_3:+39714712 None:intergenic
CCAAGCTATGTATAATTACA+TGG 0.427045 7_3:-39713082 Msa1103620:five_prime_UTR
TCCTGAGGCTTGGAACTATA+GGG 0.430918 7_3:+39712590 None:intergenic
CTTACAGATTCTCCATATGT+TGG 0.434746 7_3:-39714724 Msa1103620:five_prime_UTR
GCTTTCCAACATTCGGGTCC+AGG 0.435440 7_3:-39719714 Msa1103620:five_prime_UTR
AGACATAGTTACAACCATAT+TGG 0.442280 7_3:+39711764 None:intergenic
ATGGTGATCGAGTGAAATAT+TGG 0.443015 7_3:-39713128 Msa1103620:five_prime_UTR
AAAGTATTTGACACTTGATT+CGG 0.448246 7_3:-39710373 Msa1103620:CDS
ATTCATCAAGCTTTCCGAAC+CGG 0.448448 7_3:-39718271 Msa1103620:five_prime_UTR
TGTTGGAACTTCAGCCGGTC+AGG 0.455233 7_3:-39718219 Msa1103620:intron
GATCACCATATGTTTCGAAT+AGG 0.457073 7_3:+39713142 None:intergenic
TGTTGATTGGTCTCTCAACT+TGG 0.461636 7_3:-39710333 Msa1103620:three_prime_UTR
ATTGAAGAAAGTGGATATCA+TGG 0.463361 7_3:-39718108 Msa1103620:five_prime_UTR
AATGGATATTCTAAACATAT+GGG 0.466396 7_3:-39710462 Msa1103620:CDS
AAGACTAACAGATTTCAAAT+GGG 0.467207 7_3:-39712552 Msa1103620:exon
TGTAACAAATCTATTATCTC+CGG 0.467464 7_3:+39716805 None:intergenic
TTTCTGTTTGGACTTCTAAG+AGG 0.468595 7_3:-39710196 Msa1103620:three_prime_UTR
GAAATGAACAATATATTAGT+TGG 0.477474 7_3:+39710221 None:intergenic
TATCATGGAGGAAGAGGGCT+TGG 0.484375 7_3:-39718093 Msa1103620:five_prime_UTR
TAGTTCCAAGCCTCAGGATG+TGG 0.490504 7_3:-39712585 Msa1103620:five_prime_UTR
CTTAGAAGTCCAAACAGAAA+AGG 0.493853 7_3:+39710199 None:intergenic
GAGCTCCTATTCGAAACATA+TGG 0.495479 7_3:-39713147 Msa1103620:five_prime_UTR
AAGTTGTTCCATGAACTGTA+TGG 0.495518 7_3:-39710011 Msa1103620:three_prime_UTR
GTAACATTGTGTAGTTGGAT+TGG 0.496120 7_3:-39719959 Msa1103620:five_prime_UTR
TCCCTATAGTTCCAAGCCTC+AGG 0.497302 7_3:-39712591 Msa1103620:five_prime_UTR
AAATCTAGGTTCTTATTCTA+CGG 0.500597 7_3:-39713058 Msa1103620:five_prime_UTR
AAATGCTCAAACCTTGTGCC+TGG 0.500647 7_3:+39719696 None:intergenic
TTCTCCATCTAAGAAAACTC+TGG 0.512509 7_3:+39719800 None:intergenic
AGTGACGGCGTAAACGTTCG+TGG 0.513350 7_3:-39710525 Msa1103620:CDS
TTTGGTGTTGGAACTTCAGC+CGG 0.517258 7_3:-39718224 Msa1103620:five_prime_UTR
GTGCAACGATTGAAGAAACT+TGG 0.522017 7_3:-39714755 Msa1103620:five_prime_UTR
AGTGGATATCATGGAGGAAG+AGG 0.523410 7_3:-39718099 Msa1103620:five_prime_UTR
AGAGGGCTTGGTATATTTGA+CGG 0.523788 7_3:-39718081 Msa1103620:intron
AGCATCCACATCCTGAGGCT+TGG 0.530262 7_3:+39712580 None:intergenic
AGCTACGTGGGAATGAAGTC+CGG 0.530436 7_3:+39718252 None:intergenic
AACATTCGGGTCCAGGCACA+AGG 0.536095 7_3:-39719707 Msa1103620:intron
AAAGGAGGTATAAACAAAGA+AGG 0.536911 7_3:-39713572 Msa1103620:five_prime_UTR
AAGTGCAGGATATTCACAAA+AGG 0.542923 7_3:+39713382 None:intergenic
GCTCTTCAACAAAATATTGG+CGG 0.543907 7_3:-39713346 Msa1103620:five_prime_UTR
AATGAGAAAGAAATGTTGAA+AGG 0.546175 7_3:-39712261 Msa1103620:CDS
CGTTGAGATGGTTTCTGCGA+GGG 0.548866 7_3:+39718482 None:intergenic
AAAATAATGAGAAAACTAGT+GGG 0.552473 7_3:-39712309 Msa1103620:CDS
CTCAACTTGGAGAAATGGCA+AGG 0.555234 7_3:-39710320 Msa1103620:three_prime_UTR
TAACTTTGAAACTGTAGCAT+GGG 0.556412 7_3:+39712972 None:intergenic
TTCTCCAATTTGAATTACGC+TGG 0.557627 7_3:+39718337 None:intergenic
ACGTGACTTATCTACTTCAC+AGG 0.558237 7_3:-39718462 Msa1103620:intron
GATGCCTTGGCTGTTACAGA+AGG 0.559427 7_3:-39712147 Msa1103620:intron
CTAGTGGATAGTCAAAGTGC+AGG 0.564603 7_3:+39713368 None:intergenic
ATAATAATCAAACATAAAGT+GGG 0.564886 7_3:+39710293 None:intergenic
GGATAATCCCCGTTGAACAA+TGG 0.565796 7_3:+39712333 None:intergenic
GTAGATAAGTCACGTTGAGA+TGG 0.567628 7_3:+39718470 None:intergenic
TGTCATTGTCAAAGTAGTGC+GGG 0.568052 7_3:+39719985 None:intergenic
CGTGGGAATGAAGTCCGGTT+CGG 0.568926 7_3:+39718257 None:intergenic
TGACTGTAGATTGAAGAAAG+TGG 0.573431 7_3:-39718117 Msa1103620:intron
TTGGACTACATTCAATGAGC+CGG 0.573984 7_3:-39713109 Msa1103620:five_prime_UTR
TAACAGATTTCAAATGGGGA+TGG 0.588010 7_3:-39712547 Msa1103620:intron
ATTTGTACTGTACAGATGAA+AGG 0.591083 7_3:+39721257 None:intergenic
TTTACCTTCTGTAACAGCCA+AGG 0.591152 7_3:+39712143 None:intergenic
AGCGTAATTCAAATTGGAGA+AGG 0.596740 7_3:-39718335 Msa1103620:five_prime_UTR
TTGTGCCTGGACCCGAATGT+TGG 0.603731 7_3:+39719709 None:intergenic
TTTGGTAGCATTTATATGTG+CGG 0.604159 7_3:+39711497 None:intergenic
ATAACTTTGAAACTGTAGCA+TGG 0.607588 7_3:+39712971 None:intergenic
TCAACTTGGAGAAATGGCAA+GGG 0.611609 7_3:-39710319 Msa1103620:three_prime_UTR
TGAGCAGCATCCACATCCTG+AGG 0.615247 7_3:+39712575 None:intergenic
TTGACATAGGCAGTTCAAGA+GGG 0.626479 7_3:-39712650 Msa1103620:intron
GTGGATATCATGGAGGAAGA+GGG 0.632491 7_3:-39718098 Msa1103620:five_prime_UTR
CAAGCTATGTATAATTACAT+GGG 0.633314 7_3:-39713081 Msa1103620:five_prime_UTR
TCTAGGTTCTTATTCTACGG+AGG 0.635634 7_3:-39713055 Msa1103620:five_prime_UTR
GTGTCATTGTCAAAGTAGTG+CGG 0.637758 7_3:+39719984 None:intergenic
AGACTAACAGATTTCAAATG+GGG 0.641684 7_3:-39712551 Msa1103620:exon
TTTATGTTATAAATAAAATG+CGG 0.644405 7_3:-39710259 Msa1103620:three_prime_UTR
ATGGATATTCTAAACATATG+GGG 0.647267 7_3:-39710461 Msa1103620:CDS
TGTAACTATGTCTACCCCGA+AGG 0.653655 7_3:-39711754 Msa1103620:CDS
ATCAACGAGTTACTCAACAA+TGG 0.658866 7_3:-39713527 Msa1103620:intron
TGTTGGAGCAGAGTAATACC+AGG 0.658908 7_3:-39714707 Msa1103620:intron
GAAGAAAGTGGATATCATGG+AGG 0.661715 7_3:-39718105 Msa1103620:five_prime_UTR
TTTGACATAGGCAGTTCAAG+AGG 0.664429 7_3:-39712651 Msa1103620:intron
ATAGATGGAACCTTAAAAGG+AGG 0.682953 7_3:-39713587 Msa1103620:intron
AAATAATGAGAAAACTAGTG+GGG 0.686151 7_3:-39712308 Msa1103620:CDS
ACGTTGAGATGGTTTCTGCG+AGG 0.690914 7_3:+39718481 None:intergenic
TTTAGAGCCATTGTTCAACG+GGG 0.731687 7_3:-39712340 Msa1103620:intron
AGACATTATATAATCCTTCG+GGG 0.774274 7_3:+39711740 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATAAAATAAATAA+AGG - chr7_3:39712305-39712324 Msa1103620:CDS 0.0%
!!! TTTTTTTTTAAAAAAAATTA+CGG - chr7_3:39715005-39715024 Msa1103620:intron 0.0%
!!! TAAGTGTTATAATAATATTT+TGG - chr7_3:39710698-39710717 Msa1103620:intron 10.0%
!!! ATGAGTTTTTTTTTTTTTTT+TGG - chr7_3:39712108-39712127 Msa1103620:intron 10.0%
!!! TATAATAAATTTTGACAAAT+AGG + chr7_3:39713363-39713382 None:intergenic 10.0%
!! TCTTAAAAATATAAGTTATT+CGG - chr7_3:39713844-39713863 Msa1103620:intron 10.0%
!!! TTATATGTTTTCTTTTTTAA+TGG - chr7_3:39714683-39714702 Msa1103620:intron 10.0%
!!! TTTATTTGTTTTAATTTGAA+TGG - chr7_3:39716400-39716419 Msa1103620:intron 10.0%
!! ATATATCGTATATAATTATA+TGG - chr7_3:39717314-39717333 Msa1103620:intron 10.0%
!!! TTATGTTAAAATCAAATTTT+AGG - chr7_3:39718001-39718020 Msa1103620:intron 10.0%
!!! CAATTATTTTAAAAATAGAA+TGG + chr7_3:39719093-39719112 None:intergenic 10.0%
!!! CATTCTATTTTTAAAATAAT+TGG - chr7_3:39719091-39719110 Msa1103620:intron 10.0%
!!! TATAAAGAATGATATTTTTT+AGG - chr7_3:39719322-39719341 Msa1103620:intron 10.0%
!!! ATAAAGAATGATATTTTTTA+GGG - chr7_3:39719323-39719342 Msa1103620:intron 10.0%
!!! TATCTAATTTTTATTTTCTA+AGG - chr7_3:39719770-39719789 Msa1103620:five_prime_UTR 10.0%
!! AAAATATATGTAATATCAAA+AGG - chr7_3:39720516-39720535 Msa1103620:intron 10.0%
!! TTTATGTTATAAATAAAATG+CGG - chr7_3:39720933-39720952 Msa1103620:intron 10.0%
!!! CACTTAATAGATTTTTTTAA+CGG + chr7_3:39710161-39710180 None:intergenic 15.0%
!!! ATATATCAGAAATAGTTTTA+TGG - chr7_3:39710487-39710506 Msa1103620:CDS 15.0%
!!! TGTATATTTTTATTAGACTA+TGG + chr7_3:39710520-39710539 None:intergenic 15.0%
!!! AAACATTTTTTATTAAACCA+TGG - chr7_3:39710664-39710683 Msa1103620:intron 15.0%
!! AAAAGATAAAGGATTAAATT+GGG + chr7_3:39711775-39711794 None:intergenic 15.0%
!! AAAAAGATAAAGGATTAAAT+TGG + chr7_3:39711776-39711795 None:intergenic 15.0%
!! TATAAACATAAAGATCAAAA+TGG - chr7_3:39712242-39712261 Msa1103620:CDS 15.0%
!! ATAAACATAAAGATCAAAAT+GGG - chr7_3:39712243-39712262 Msa1103620:CDS 15.0%
!! GATAAAATAGTATAATTGAA+TGG + chr7_3:39713203-39713222 None:intergenic 15.0%
!! TCATAATTTAACACTATTAT+AGG - chr7_3:39713324-39713343 Msa1103620:intron 15.0%
!! GTAATAGAAAAATTGATAAA+CGG - chr7_3:39713387-39713406 Msa1103620:five_prime_UTR 15.0%
!! TAATAGAAAAATTGATAAAC+GGG - chr7_3:39713388-39713407 Msa1103620:five_prime_UTR 15.0%
!!! AATTAATTAACCTCTAAAAT+TGG + chr7_3:39713602-39713621 None:intergenic 15.0%
!! GTTACATTTAAATAACTTAA+AGG + chr7_3:39713686-39713705 None:intergenic 15.0%
!! GTTATTTAAATGTAACAAAT+TGG - chr7_3:39713690-39713709 Msa1103620:intron 15.0%
!! CTTAAAAATATAAGTTATTC+GGG - chr7_3:39713845-39713864 Msa1103620:intron 15.0%
!! TTAAAAATATAAGTTATTCG+GGG - chr7_3:39713846-39713865 Msa1103620:intron 15.0%
!! GTTACAATTAAAAAACTTAA+AGG - chr7_3:39713876-39713895 Msa1103620:intron 15.0%
!! GTTATAATTAGATAACTTAA+AGG - chr7_3:39714000-39714019 Msa1103620:intron 15.0%
!!! ATTTAACCTAGTTTTTTTTA+GGG - chr7_3:39714034-39714053 Msa1103620:intron 15.0%
!! TATATACTACATATTCTATA+AGG + chr7_3:39714228-39714247 None:intergenic 15.0%
!!! TTCTTATTTTGATAAGAATA+TGG - chr7_3:39714588-39714607 Msa1103620:intron 15.0%
!!! CTATACTATTTATTGTTTTT+TGG + chr7_3:39714727-39714746 None:intergenic 15.0%
!! TAAGAATTTCCATATTTAAA+GGG + chr7_3:39715470-39715489 None:intergenic 15.0%
!!! GTATTCACAAAATTTTATTT+TGG + chr7_3:39715696-39715715 None:intergenic 15.0%
!!! TTTTATTTCTAAAAATTAGC+AGG - chr7_3:39716657-39716676 Msa1103620:intron 15.0%
!!! AATTTTTTTTCTCTTCATTA+GGG + chr7_3:39716713-39716732 None:intergenic 15.0%
!!! TAATTTTTTTTCTCTTCATT+AGG + chr7_3:39716714-39716733 None:intergenic 15.0%
!! TATATTTCTTTACATAAAGA+TGG - chr7_3:39716741-39716760 Msa1103620:intron 15.0%
!!! ATCAAAAAGTTTTTAAGTTA+AGG - chr7_3:39717192-39717211 Msa1103620:intron 15.0%
!!! TCAAAAAGTTTTTAAGTTAA+GGG - chr7_3:39717193-39717212 Msa1103620:intron 15.0%
!!! TATTCCTTAAACTTATTTTT+AGG + chr7_3:39717258-39717277 None:intergenic 15.0%
!!! TTTTTTTTTTTTTGTTGAAG+AGG + chr7_3:39717404-39717423 None:intergenic 15.0%
!! ATTATTATATATTGCAAGAA+AGG + chr7_3:39717548-39717567 None:intergenic 15.0%
!! CTAATTATTGCAATAAATAT+TGG + chr7_3:39717706-39717725 None:intergenic 15.0%
!! TTAAAATAATTGGTATACAA+AGG - chr7_3:39719101-39719120 Msa1103620:intron 15.0%
!! AATTTAATTCATAGAGTTTA+TGG + chr7_3:39719160-39719179 None:intergenic 15.0%
!!! TAAAGAATGATATTTTTTAG+GGG - chr7_3:39719324-39719343 Msa1103620:intron 15.0%
!!! AATTATTAACTAGATTTTCT+CGG - chr7_3:39719877-39719896 Msa1103620:intron 15.0%
!! ACAAAAATTACAAATCTTAA+GGG + chr7_3:39720494-39720513 None:intergenic 15.0%
!! AACAAAAATTACAAATCTTA+AGG + chr7_3:39720495-39720514 None:intergenic 15.0%
!! ATAATAATCAAACATAAAGT+GGG + chr7_3:39720902-39720921 None:intergenic 15.0%
!! TATAATAATCAAACATAAAG+TGG + chr7_3:39720903-39720922 None:intergenic 15.0%
!! TGACTTTCAAATAAATAAAT+TGG - chr7_3:39721084-39721103 Msa1103620:intron 15.0%
!!! AAATAAATAAATTGGTTCAA+TGG - chr7_3:39721092-39721111 Msa1103620:intron 15.0%
!! CTAAAGTGAAAGTAAAAAAA+TGG - chr7_3:39710223-39710242 Msa1103620:three_prime_UTR 20.0%
!! AATAAAAATATACACAGAGA+TGG - chr7_3:39710526-39710545 Msa1103620:CDS 20.0%
!! ACTAAAGTGAAAGTAAAAAA+TGG + chr7_3:39710222-39710241 None:intergenic 20.0%
!!! CACTTAACAGATTTTTTTAA+CGG - chr7_3:39711034-39711053 Msa1103620:intron 20.0%
!! ATTGGTAAAAAAAGGTTATT+TGG - chr7_3:39711251-39711270 Msa1103620:intron 20.0%
!! AAAAAAGTGAGACAAATTAA+TGG - chr7_3:39711569-39711588 Msa1103620:intron 20.0%
!!! ATTTCTAAGGTAAATAAGTA+GGG - chr7_3:39711650-39711669 Msa1103620:intron 20.0%
!! TTTGGCATTTAAAAAGATAA+AGG + chr7_3:39711786-39711805 None:intergenic 20.0%
!!! ATATAAAAGGACAAGAATTT+TGG + chr7_3:39711804-39711823 None:intergenic 20.0%
!!! TTGGAGATTTTAGATATAAA+AGG + chr7_3:39711817-39711836 None:intergenic 20.0%
!!! TGGTTTTTTTTTGAGTTTAT+GGG - chr7_3:39712069-39712088 Msa1103620:intron 20.0%
!!! TTTTTTTTTTTTTTGGTGTC+TGG - chr7_3:39712115-39712134 Msa1103620:intron 20.0%
!!! TTACGAGTTTTATATGAAAA+AGG - chr7_3:39712202-39712221 Msa1103620:CDS 20.0%
!! GTAAAAATAGAAAGAAAAAG+CGG + chr7_3:39713181-39713200 None:intergenic 20.0%
!!! TATACCATTTTATCTTTAAC+CGG + chr7_3:39713435-39713454 None:intergenic 20.0%
!!! TTTTTTTTTCCCTATTCATT+TGG - chr7_3:39713621-39713640 Msa1103620:intron 20.0%
!!! TTTTTTTTCCCTATTCATTT+GGG - chr7_3:39713622-39713641 Msa1103620:intron 20.0%
!!! GATTTAACCTAGTTTTTTTT+AGG - chr7_3:39714033-39714052 Msa1103620:intron 20.0%
!!! TTTAACCTAGTTTTTTTTAG+GGG - chr7_3:39714035-39714054 Msa1103620:intron 20.0%
!! ACAAAAAAAAAAAAGGAGAT+AGG + chr7_3:39714136-39714155 None:intergenic 20.0%
!!! TTTTTTTTTTTTGTCACAGA+GGG - chr7_3:39714142-39714161 Msa1103620:intron 20.0%
!!! TGTTTTTGGATTGATAATTT+AGG + chr7_3:39715167-39715186 None:intergenic 20.0%
!!! ACTATACTTTTCATTTTGTA+AGG - chr7_3:39715217-39715236 Msa1103620:intron 20.0%
!! AAGAATTTCCATATTTAAAG+GGG + chr7_3:39715469-39715488 None:intergenic 20.0%
!! GTAAGAATTTCCATATTTAA+AGG + chr7_3:39715471-39715490 None:intergenic 20.0%
!! TTGAATTACATAAGTATTTC+AGG + chr7_3:39715552-39715571 None:intergenic 20.0%
!!! TTCACAAAATTTTATTTTGG+TGG + chr7_3:39715693-39715712 None:intergenic 20.0%
!! ATATGCAAACAATTTATTCA+AGG + chr7_3:39716326-39716345 None:intergenic 20.0%
!! TGAATTAATAAGTTACTCTT+TGG + chr7_3:39716559-39716578 None:intergenic 20.0%
!! AAAGAGTAACTTATTAATTC+AGG - chr7_3:39716558-39716577 Msa1103620:intron 20.0%
!! AAGAGTAACTTATTAATTCA+GGG - chr7_3:39716559-39716578 Msa1103620:intron 20.0%
!! AAAACACTAGATCTATAATT+TGG - chr7_3:39717057-39717076 Msa1103620:intron 20.0%
!! AAACACTAGATCTATAATTT+GGG - chr7_3:39717058-39717077 Msa1103620:intron 20.0%
!! GAAACCTAAAAATAAGTTTA+AGG - chr7_3:39717251-39717270 Msa1103620:intron 20.0%
!! ATAATTATATGGATATTCAG+AGG - chr7_3:39717325-39717344 Msa1103620:intron 20.0%
!!! TTTAAGGTTGAATCAATTTA+TGG + chr7_3:39717934-39717953 None:intergenic 20.0%
!!! ATTTTTGTGAGACTAATTTA+AGG + chr7_3:39717950-39717969 None:intergenic 20.0%
!!! AAATTTTAGGAAACATTTCA+AGG - chr7_3:39718014-39718033 Msa1103620:intron 20.0%
!!! ATTATTGCTATTACGTTAAT+CGG + chr7_3:39718416-39718435 None:intergenic 20.0%
!! TTCCATTAAATATTTGACAT+AGG - chr7_3:39718529-39718548 Msa1103620:intron 20.0%
!! TATAAAACACAAAATATGAG+TGG + chr7_3:39718697-39718716 None:intergenic 20.0%
!!! CATATCAAATTTTTATCTTG+CGG - chr7_3:39718806-39718825 Msa1103620:intron 20.0%
!!! ACTAGTTTTCTCATTATTTT+TGG + chr7_3:39718883-39718902 None:intergenic 20.0%
!! AAAAATAATGAGAAAACTAG+TGG - chr7_3:39718882-39718901 Msa1103620:intron 20.0%
!! AAAATAATGAGAAAACTAGT+GGG - chr7_3:39718883-39718902 Msa1103620:intron 20.0%
!!! AAAGAATGATATTTTTTAGG+GGG - chr7_3:39719325-39719344 Msa1103620:intron 20.0%
!!! GTTCACTTTTAATAATTTGT+AGG - chr7_3:39719404-39719423 Msa1103620:intron 20.0%
!! TGTAAAAACAATGATGATTA+GGG + chr7_3:39720249-39720268 None:intergenic 20.0%
!! ATGTAAAAACAATGATGATT+AGG + chr7_3:39720437-39720456 None:intergenic 20.0%
!! AATGGATATTCTAAACATAT+GGG - chr7_3:39720730-39720749 Msa1103620:intron 20.0%
!! GAAATGAACAATATATTAGT+TGG + chr7_3:39720974-39720993 None:intergenic 20.0%
!!! TCCTTAGTAGTTTTTTATCT+TGG - chr7_3:39710007-39710026 Msa1103620:three_prime_UTR 25.0%
! TCCAAGATAAAAAACTACTA+AGG + chr7_3:39710011-39710030 None:intergenic 25.0%
!!! AATAGATTTTTTTAACGGCA+GGG + chr7_3:39710156-39710175 None:intergenic 25.0%
!!! TAATAGATTTTTTTAACGGC+AGG + chr7_3:39710157-39710176 None:intergenic 25.0%
!! AAATCTATTAAGTGATGATG+TGG - chr7_3:39710167-39710186 Msa1103620:three_prime_UTR 25.0%
! AAGTAAAAAAATGGTCACTT+TGG - chr7_3:39710232-39710251 Msa1103620:three_prime_UTR 25.0%
! AGAGATTTAACAGTAAATTG+AGG + chr7_3:39710280-39710299 None:intergenic 25.0%
! GAGTATACTTATTGTCAATT+AGG - chr7_3:39710304-39710323 Msa1103620:three_prime_UTR 25.0%
! AATATCCTCAACTTTATGTT+AGG - chr7_3:39710344-39710363 Msa1103620:three_prime_UTR 25.0%
! CAAATATAAATGCCCAAATA+TGG - chr7_3:39710585-39710604 Msa1103620:intron 25.0%
! CACTTATAAAAATGATTCCA+TGG + chr7_3:39710684-39710703 None:intergenic 25.0%
! AAAGTAAAAAATGGTCACTT+TGG + chr7_3:39710964-39710983 None:intergenic 25.0%
! ACCTTAGAAATGAATTCTAT+CGG + chr7_3:39711641-39711660 None:intergenic 25.0%
!!! CATTTCTAAGGTAAATAAGT+AGG - chr7_3:39711649-39711668 Msa1103620:intron 25.0%
! GTTACTTGAAATTAAGTTAG+AGG + chr7_3:39711737-39711756 None:intergenic 25.0%
! AAAGGATTAAATTGGGATAA+AGG + chr7_3:39711768-39711787 None:intergenic 25.0%
! GTTTAAGAGAAACTAAAAGA+AGG + chr7_3:39711988-39712007 None:intergenic 25.0%
!!! CAAAAAAAGAATCTGCTTTT+TGG - chr7_3:39712007-39712026 Msa1103620:intron 25.0%
!!! CTGGTTTTTTTTTGAGTTTA+TGG - chr7_3:39712068-39712087 Msa1103620:intron 25.0%
! ATAATGAATGTTACTATTGC+AGG - chr7_3:39712674-39712693 Msa1103620:intron 25.0%
! CAATCACAAAAAATTACCAT+AGG + chr7_3:39713022-39713041 None:intergenic 25.0%
!! TTTTTGTGATTGTAGATTGA+AGG - chr7_3:39713030-39713049 Msa1103620:five_prime_UTR 25.0%
! ATTCATACCTGTATATATAG+AGG - chr7_3:39713138-39713157 Msa1103620:five_prime_UTR 25.0%
! TTCATACCTGTATATATAGA+GGG - chr7_3:39713139-39713158 Msa1103620:five_prime_UTR 25.0%
!! TATTTGAACTCCAATTTTAG+AGG - chr7_3:39713589-39713608 Msa1103620:intron 25.0%
! TACATATTCCCAAATGAATA+GGG + chr7_3:39713633-39713652 None:intergenic 25.0%
! TAAATAACTTAAAGGACCTA+TGG + chr7_3:39713678-39713697 None:intergenic 25.0%
! GTAGTACGAAAAAAACTTAA+AGG + chr7_3:39713717-39713736 None:intergenic 25.0%
!!! AAGTTTTTTTCGTACTACTT+AGG - chr7_3:39713719-39713738 Msa1103620:intron 25.0%
! TTCGTACGAAAAAAACTTAA+AGG + chr7_3:39713777-39713796 None:intergenic 25.0%
! GTTACGGTTAAATAACTAAA+AGG + chr7_3:39713806-39713825 None:intergenic 25.0%
! TGAAATTCGACAAATTGTTA+CGG + chr7_3:39713822-39713841 None:intergenic 25.0%
! GATATAAACTTAAATGACCA+TGG - chr7_3:39713976-39713995 Msa1103620:intron 25.0%
! GTTATCTAATTATAACACCA+TGG + chr7_3:39713996-39714015 None:intergenic 25.0%
! AAAAACTAGGTTAAATCACA+CGG + chr7_3:39714030-39714049 None:intergenic 25.0%
! CTCTGTGACAAAAAAAAAAA+AGG + chr7_3:39714143-39714162 None:intergenic 25.0%
!!! CTTTTTTTTTTTTGTCACAG+AGG - chr7_3:39714141-39714160 Msa1103620:intron 25.0%
! TGTAACAAATCTATTATCTC+CGG + chr7_3:39714390-39714409 None:intergenic 25.0%
!! TTTGGATTGATAATTTAGGA+GGG + chr7_3:39715163-39715182 None:intergenic 25.0%
!!! TTTTGGATTGATAATTTAGG+AGG + chr7_3:39715164-39715183 None:intergenic 25.0%
!! ATTTTGTAAGGCTTCAAAAA+AGG - chr7_3:39715229-39715248 Msa1103620:intron 25.0%
! CGTATGTATAAACTTTCAAA+TGG - chr7_3:39715259-39715278 Msa1103620:intron 25.0%
! TTCTTACATAAGTATCAGAA+TGG - chr7_3:39715484-39715503 Msa1103620:intron 25.0%
! AAATGTTAAATCAAGCTCAT+TGG - chr7_3:39715570-39715589 Msa1103620:intron 25.0%
!!! TGAAATGATTCTAGGATAAT+GGG + chr7_3:39715646-39715665 None:intergenic 25.0%
!!! TTGAAATGATTCTAGGATAA+TGG + chr7_3:39715647-39715666 None:intergenic 25.0%
! TTATCCTAGAATCATTTCAA+AGG - chr7_3:39715647-39715666 Msa1103620:intron 25.0%
! AAAAATAATCGCAAAATCGT+AGG - chr7_3:39715732-39715751 Msa1103620:intron 25.0%
! ACCATGAATATATTATCGAA+TGG - chr7_3:39715784-39715803 Msa1103620:intron 25.0%
! CCATGAATATATTATCGAAT+GGG - chr7_3:39715785-39715804 Msa1103620:intron 25.0%
! CATGAATATATTATCGAATG+GGG - chr7_3:39715786-39715805 Msa1103620:intron 25.0%
! AATGATTGACAATGTTGTAA+TGG + chr7_3:39715826-39715845 None:intergenic 25.0%
! AACATTGTCAATCATTTCAT+GGG - chr7_3:39715830-39715849 Msa1103620:intron 25.0%
! GTCATATTAGAAGAAAACAT+TGG - chr7_3:39715861-39715880 Msa1103620:intron 25.0%
! TTATGTGGAAAGCAATAATT+TGG - chr7_3:39715900-39715919 Msa1103620:intron 25.0%
! AACATTATTAAGTCACCTAT+TGG + chr7_3:39716083-39716102 None:intergenic 25.0%
!! AGGTGACTTAATAATGTTTT+TGG - chr7_3:39716085-39716104 Msa1103620:intron 25.0%
! ATTTATTCAAGGTAGTACAA+GGG + chr7_3:39716315-39716334 None:intergenic 25.0%
! AATTTATTCAAGGTAGTACA+AGG + chr7_3:39716316-39716335 None:intergenic 25.0%
!!! AGTACATTCATTAGTTTTTG+TGG - chr7_3:39716590-39716609 Msa1103620:intron 25.0%
! TCTAAAAATTAGCAGGTTTA+TGG - chr7_3:39716664-39716683 Msa1103620:intron 25.0%
! TTTAATCTACTAGTATGTCT+TGG - chr7_3:39716807-39716826 Msa1103620:five_prime_UTR 25.0%
! CCAACATTGAATGTTATATT+TGG + chr7_3:39716902-39716921 None:intergenic 25.0%
! CCAAATATAACATTCAATGT+TGG - chr7_3:39716899-39716918 Msa1103620:intron 25.0%
! AGTAGTTGTACAACAAATTT+AGG + chr7_3:39716934-39716953 None:intergenic 25.0%
! TATCACTTTCCTTTCTATTT+AGG - chr7_3:39716996-39717015 Msa1103620:intron 25.0%
! AACACTAGATCTATAATTTG+GGG - chr7_3:39717059-39717078 Msa1103620:intron 25.0%
! CACCTAATAAGCATAAATAT+AGG - chr7_3:39717112-39717131 Msa1103620:intron 25.0%
! GTCCTATATTTATGCTTATT+AGG + chr7_3:39717117-39717136 None:intergenic 25.0%
! TTAGTCAAACAAAATGCTAA+CGG - chr7_3:39717156-39717175 Msa1103620:intron 25.0%
!!! ACTTATTTTTAGGTTTCACT+TGG + chr7_3:39717248-39717267 None:intergenic 25.0%
! ATATAAAGAGTTGTACCAAA+TGG - chr7_3:39717350-39717369 Msa1103620:intron 25.0%
! TCGTTAAACTATATTTCACA+TGG - chr7_3:39717500-39717519 Msa1103620:intron 25.0%
!! TTTGTTTATACCTCCTTTTA+AGG + chr7_3:39717618-39717637 None:intergenic 25.0%
! ATTCAAGTGAATTTACACAA+TGG + chr7_3:39717886-39717905 None:intergenic 25.0%
! CAAGCTATGTATAATTACAT+GGG - chr7_3:39718111-39718130 Msa1103620:five_prime_UTR 25.0%
! TATAATTACATGGGAAATCT+AGG - chr7_3:39718120-39718139 Msa1103620:intron 25.0%
! AAATCTAGGTTCTTATTCTA+CGG - chr7_3:39718134-39718153 Msa1103620:intron 25.0%
!! TTTTCAAAATATGTCTTACC+TGG + chr7_3:39718260-39718279 None:intergenic 25.0%
! AAAATTGCATGTTACATGTA+TGG - chr7_3:39718276-39718295 Msa1103620:five_prime_UTR 25.0%
!! TTATTGCTATTACGTTAATC+GGG + chr7_3:39718415-39718434 None:intergenic 25.0%
! TGCCTATGTCAAATATTTAA+TGG + chr7_3:39718534-39718553 None:intergenic 25.0%
! AAAGACTAACAGATTTCAAA+TGG - chr7_3:39718639-39718658 Msa1103620:intron 25.0%
! AAGACTAACAGATTTCAAAT+GGG - chr7_3:39718640-39718659 Msa1103620:intron 25.0%
! AAATAATGAGAAAACTAGTG+GGG - chr7_3:39718884-39718903 Msa1103620:intron 25.0%
!!! TTTCTCATTTGTTGTGAATT+CGG + chr7_3:39718920-39718939 None:intergenic 25.0%
! AATGAGAAAGAAATGTTGAA+AGG - chr7_3:39718931-39718950 Msa1103620:intron 25.0%
! ATTGTCAATAGGATTAATCT+TGG + chr7_3:39719022-39719041 None:intergenic 25.0%
!! AATAATTTGTAGGACCAATA+TGG - chr7_3:39719414-39719433 Msa1103620:intron 25.0%
! AAGACATTATATAATCCTTC+GGG + chr7_3:39719456-39719475 None:intergenic 25.0%
! CAAGACATTATATAATCCTT+CGG + chr7_3:39719457-39719476 None:intergenic 25.0%
!!! TTTTCCACATCTTTAGAATT+TGG - chr7_3:39719739-39719758 Msa1103620:five_prime_UTR 25.0%
!! ATTTGAGTTTATGTACAACT+TGG + chr7_3:39719953-39719972 None:intergenic 25.0%
! TACATAAACTCAAATCAGAA+GGG - chr7_3:39719958-39719977 Msa1103620:five_prime_UTR 25.0%
! GTGTAAAAACAATGATGATT+AGG + chr7_3:39720250-39720269 None:intergenic 25.0%
! TATTGTATTGTTCACTTTGA+AGG - chr7_3:39720460-39720479 Msa1103620:intron 25.0%
! CAATGAAACATTAGTATGAT+AGG - chr7_3:39720561-39720580 Msa1103620:intron 25.0%
!!! TGTTTTTACATTGATAGTGA+CGG - chr7_3:39720652-39720671 Msa1103620:intron 25.0%
! CAATGGATATTCTAAACATA+TGG - chr7_3:39720729-39720748 Msa1103620:intron 25.0%
! ATGGATATTCTAAACATATG+GGG - chr7_3:39720731-39720750 Msa1103620:intron 25.0%
!! AAAGTATTTGACACTTGATT+CGG - chr7_3:39720819-39720838 Msa1103620:intron 25.0%
! CTAAATGTTCTTATGTTGAT+TGG - chr7_3:39720846-39720865 Msa1103620:intron 25.0%
! ACAATATATTAGTTGGTCAT+TGG + chr7_3:39720967-39720986 None:intergenic 25.0%
TTGTATTTAATCCTGAGTCA+GGG + chr7_3:39711100-39711119 None:intergenic 30.0%
TTTGTATTTAATCCTGAGTC+AGG + chr7_3:39711099-39711118 None:intergenic 30.0%
!!! GGATATTGATTTTCGATTCA+AGG + chr7_3:39710865-39710884 None:intergenic 30.0%
!!! GGATATTGATTTTCGATTCA+GGG + chr7_3:39710865-39710884 None:intergenic 30.0%
!!! AGGATATTGATTTTCGATTC+AGG + chr7_3:39710864-39710883 None:intergenic 30.0%
AAATTTCGTGTTTACTGTCA+AGG + chr7_3:39710403-39710422 None:intergenic 30.0%
!! GTTAAACTAACAACTTGCTA+AGG + chr7_3:39710435-39710454 None:intergenic 30.0%
CAAAAGATTGCACCATATTT+GGG + chr7_3:39710600-39710619 None:intergenic 30.0%
TCAAAAGATTGCACCATATT+TGG + chr7_3:39710601-39710620 None:intergenic 30.0%
GTGTATATTTACTGTCAGTT+AGG + chr7_3:39710820-39710839 None:intergenic 30.0%
AATATCCTCAACTTACTGTT+AGG + chr7_3:39710852-39710871 None:intergenic 30.0%
!!! AGGATATTGATTTTCGATTC+AGG - chr7_3:39710864-39710883 Msa1103620:intron 30.0%
!!! GGATATTGATTTTCGATTCA+GGG - chr7_3:39710865-39710884 Msa1103620:intron 30.0%
AGAGATCTAACAGTAAATTG+AGG - chr7_3:39710916-39710935 Msa1103620:intron 30.0%
!!! AGGATATTGATTTTCGATTC+AGG - chr7_3:39710864-39710883 Msa1103620:intron 30.0%
!!! GGATATTGATTTTCGATTCA+GGG - chr7_3:39710865-39710884 Msa1103620:intron 30.0%
! AAATCTGTTAAGTGATGATG+TGG + chr7_3:39711028-39711047 None:intergenic 30.0%
!!! TAACAGATTTTTTTAACGGC+AGG - chr7_3:39711038-39711057 Msa1103620:intron 30.0%
!!! AACAGATTTTTTTAACGGCA+GGG - chr7_3:39711039-39711058 Msa1103620:intron 30.0%
TTTGTATTTAATCCTGAGTC+AGG - chr7_3:39711099-39711118 Msa1103620:intron 30.0%
TTGTATTTAATCCTGAGTCA+GGG - chr7_3:39711100-39711119 Msa1103620:intron 30.0%
!! GTAGTTGGATTGGTAAAAAA+AGG - chr7_3:39711243-39711262 Msa1103620:intron 30.0%
! TTTTCCAGAGTTTTCTTAGA+TGG - chr7_3:39711388-39711407 Msa1103620:intron 30.0%
! GTTTTCTTAGATGGAGAAAA+TGG - chr7_3:39711397-39711416 Msa1103620:intron 30.0%
!! TTGTTTTGCTTTCCAACATT+CGG - chr7_3:39711471-39711490 Msa1103620:intron 30.0%
! CGATGAACTTTATGAGTTTT+TGG + chr7_3:39711836-39711855 None:intergenic 30.0%
!! TGAGAATTTTGATGAGTTTC+TGG + chr7_3:39711865-39711884 None:intergenic 30.0%
CATATCTTCATCATCTTAAG+TGG - chr7_3:39711883-39711902 Msa1103620:intron 30.0%
!!! GGATTTTTTGTATGAGTTTC+TGG - chr7_3:39712049-39712068 Msa1103620:intron 30.0%
GACAATGCATAATATATGCA+AGG + chr7_3:39712156-39712175 None:intergenic 30.0%
CACATGGATAATACATTGTT+AGG + chr7_3:39712379-39712398 None:intergenic 30.0%
! TTTAGAATTCATGACGAAGA+CGG + chr7_3:39712498-39712517 None:intergenic 30.0%
TCTACTTCACAGGTAATTAT+TGG - chr7_3:39712740-39712759 Msa1103620:intron 30.0%
AATCAATATCATTGTGCCTA+TGG + chr7_3:39712784-39712803 None:intergenic 30.0%
ATTGAAGAAAGTGGATATCA+TGG - chr7_3:39713084-39713103 Msa1103620:five_prime_UTR 30.0%
TCATACCTGTATATATAGAG+GGG - chr7_3:39713140-39713159 Msa1103620:five_prime_UTR 30.0%
! TCTACCGGTTAAAGATAAAA+TGG - chr7_3:39713428-39713447 Msa1103620:intron 30.0%
CTACATATTCCCAAATGAAT+AGG + chr7_3:39713634-39713653 None:intergenic 30.0%
!!! GGGAATATGTAGTAGTTTTT+TGG - chr7_3:39713642-39713661 Msa1103620:intron 30.0%
!! TTTTGGCTAAATTACACCAT+AGG - chr7_3:39713659-39713678 Msa1103620:intron 30.0%
GTGTTACGAAGAATACTTAA+AGG - chr7_3:39713905-39713924 Msa1103620:intron 30.0%
AAAACTAGGTTAAATCACAC+GGG + chr7_3:39714029-39714048 None:intergenic 30.0%
TTCAACCCCTAAAAAAAACT+AGG + chr7_3:39714043-39714062 None:intergenic 30.0%
TCCATCCAAAATGAAGATTA+AGG - chr7_3:39714178-39714197 Msa1103620:intron 30.0%
CCATCCAAAATGAAGATTAA+GGG - chr7_3:39714179-39714198 Msa1103620:intron 30.0%
CATCCAAAATGAAGATTAAG+GGG - chr7_3:39714180-39714199 Msa1103620:intron 30.0%
AAAATGAAGATTAAGGGGAT+GGG - chr7_3:39714185-39714204 Msa1103620:intron 30.0%
! AGATTAAGGAGAGATTTTGA+TGG + chr7_3:39714614-39714633 None:intergenic 30.0%
!!! GTTATTTTAGACCAGAGATT+TGG + chr7_3:39714861-39714880 None:intergenic 30.0%
AATAACCAAATTACCCATTG+TGG - chr7_3:39714875-39714894 Msa1103620:intron 30.0%
! TTGGATTGATAATTTAGGAG+GGG + chr7_3:39715162-39715181 None:intergenic 30.0%
! ACTTTCAAATGGATTTCCTT+TGG - chr7_3:39715270-39715289 Msa1103620:intron 30.0%
! CTTTCAAATGGATTTCCTTT+GGG - chr7_3:39715271-39715290 Msa1103620:intron 30.0%
! AGTTTTTACTATGTTCCCAA+AGG + chr7_3:39715289-39715308 None:intergenic 30.0%
AAAACTGTAAGAAAGTAACC+TGG - chr7_3:39715303-39715322 Msa1103620:intron 30.0%
TGTGTGCAAACAAAAGAATT+TGG - chr7_3:39715340-39715359 Msa1103620:intron 30.0%
GTGTGCAAACAAAAGAATTT+GGG - chr7_3:39715341-39715360 Msa1103620:intron 30.0%
!!! ACATAGTTTTATTAGCGAAG+TGG - chr7_3:39715396-39715415 Msa1103620:intron 30.0%
! TTTTATTAGCGAAGTGGAAA+TGG - chr7_3:39715402-39715421 Msa1103620:intron 30.0%
! AGTTGATACTAATACTCTCT+AGG - chr7_3:39715433-39715452 Msa1103620:intron 30.0%
GTTGATACTAATACTCTCTA+GGG - chr7_3:39715434-39715453 Msa1103620:intron 30.0%
!! GGTTTGTTGATTACAAAAGT+AGG + chr7_3:39715525-39715544 None:intergenic 30.0%
! TACATAAGTATTTCAGGTGT+GGG + chr7_3:39715546-39715565 None:intergenic 30.0%
! TTACATAAGTATTTCAGGTG+TGG + chr7_3:39715547-39715566 None:intergenic 30.0%
!! CTTTCCTTTGAAATGATTCT+AGG + chr7_3:39715654-39715673 None:intergenic 30.0%
CCCATTCGATAATATATTCA+TGG + chr7_3:39715788-39715807 None:intergenic 30.0%
CAACATTGTCAATCATTTCA+TGG - chr7_3:39715829-39715848 Msa1103620:intron 30.0%
AAGCAATAATTTGGTCGTTA+TGG - chr7_3:39715909-39715928 Msa1103620:intron 30.0%
AAAAGTTGCAAACTTTAACG+AGG - chr7_3:39715961-39715980 Msa1103620:intron 30.0%
TTAAGTCACCTATTGGAAAT+TGG + chr7_3:39716076-39716095 None:intergenic 30.0%
ATACCAATTTATTGATGCCA+TGG - chr7_3:39716114-39716133 Msa1103620:intron 30.0%
GAAACTATGAACAAGAGAAT+GGG + chr7_3:39716168-39716187 None:intergenic 30.0%
AGAAACTATGAACAAGAGAA+TGG + chr7_3:39716169-39716188 None:intergenic 30.0%
!! AATTTGAATGGTCTTGTAGA+AGG - chr7_3:39716412-39716431 Msa1103620:intron 30.0%
! GTTAGTTCAAAAGTTTTACC+TGG + chr7_3:39716506-39716525 None:intergenic 30.0%
!!! CATTCATTAGTTTTTGTGGA+CGG - chr7_3:39716594-39716613 Msa1103620:intron 30.0%
CTTTACATAAAGATGGTTGA+TGG - chr7_3:39716748-39716767 Msa1103620:intron 30.0%
TTCTTTGTCTTTCTTAGAGT+AGG - chr7_3:39716865-39716884 Msa1103620:intron 30.0%
! ACTACATTTTCATAGTAGTG+TGG - chr7_3:39716951-39716970 Msa1103620:intron 30.0%
! CTACATTTTCATAGTAGTGT+GGG - chr7_3:39716952-39716971 Msa1103620:intron 30.0%
AGAACTAGACCTAAATAGAA+AGG + chr7_3:39717008-39717027 None:intergenic 30.0%
TGATAAAACAAACATCAGCA+TGG + chr7_3:39717433-39717452 None:intergenic 30.0%
TGTATAGATGGAACCTTAAA+AGG - chr7_3:39717602-39717621 Msa1103620:intron 30.0%
! AAAGGAGGTATAAACAAAGA+AGG - chr7_3:39717620-39717639 Msa1103620:intron 30.0%
TTCAATACCTGCACATTTAA+AGG + chr7_3:39717790-39717809 None:intergenic 30.0%
! ATATTTTGTTGAAGAGCTAG+TGG + chr7_3:39717843-39717862 None:intergenic 30.0%
! CTAGCTCTTCAACAAAATAT+TGG - chr7_3:39717843-39717862 Msa1103620:intron 30.0%
CCATGTAATTATACATAGCT+TGG + chr7_3:39718113-39718132 None:intergenic 30.0%
CCAAGCTATGTATAATTACA+TGG - chr7_3:39718110-39718129 Msa1103620:five_prime_UTR 30.0%
!! TAACTTTGAAACTGTAGCAT+GGG + chr7_3:39718223-39718242 None:intergenic 30.0%
!! ATAACTTTGAAACTGTAGCA+TGG + chr7_3:39718224-39718243 None:intergenic 30.0%
GTTATACAAATCCAAATTCC+AGG - chr7_3:39718239-39718258 Msa1103620:five_prime_UTR 30.0%
AATATGTCTTACCTGGAATT+TGG + chr7_3:39718253-39718272 None:intergenic 30.0%
ATTCACAACAACATGACTAA+AGG - chr7_3:39718379-39718398 Msa1103620:intron 30.0%
TTCACAACAACATGACTAAA+GGG - chr7_3:39718380-39718399 Msa1103620:intron 30.0%
! TATTGCTATTACGTTAATCG+GGG + chr7_3:39718414-39718433 None:intergenic 30.0%
AGACTAACAGATTTCAAATG+GGG - chr7_3:39718641-39718660 Msa1103620:intron 30.0%
CACAAAATATGAGTGGTTTA+TGG + chr7_3:39718690-39718709 None:intergenic 30.0%
!! TTCTCATTTGTTGTGAATTC+GGG + chr7_3:39718919-39718938 None:intergenic 30.0%
! AAAGGAAGTACAGACTTTAT+TGG - chr7_3:39718949-39718968 Msa1103620:intron 30.0%
! AAGGAAGTACAGACTTTATT+GGG - chr7_3:39718950-39718969 Msa1103620:intron 30.0%
!! GGATTAATCTTGGTTCTATT+TGG + chr7_3:39719012-39719031 None:intergenic 30.0%
! AAGGCATCAAAATTGTCAAT+AGG + chr7_3:39719033-39719052 None:intergenic 30.0%
!! TATTGACAATTTTGATGCCT+TGG - chr7_3:39719032-39719051 Msa1103620:intron 30.0%
! GTTTATGGTGTCAATTTCAA+TGG + chr7_3:39719145-39719164 None:intergenic 30.0%
!!! CATTATTGCAGTTTTGAATG+TGG - chr7_3:39719253-39719272 Msa1103620:intron 30.0%
AGACATAGTTACAACCATAT+TGG + chr7_3:39719431-39719450 None:intergenic 30.0%
AGACATTATATAATCCTTCG+GGG + chr7_3:39719455-39719474 None:intergenic 30.0%
! TTTTCAGTGATGTAGATTCT+TGG + chr7_3:39719507-39719526 None:intergenic 30.0%
AGAATCTACATCACTGAAAA+TGG - chr7_3:39719507-39719526 Msa1103620:intron 30.0%
! TTTGGTAGCATTTATATGTG+CGG + chr7_3:39719698-39719717 None:intergenic 30.0%
! AACTTACTTAATTGCTGCTT+TGG + chr7_3:39719716-39719735 None:intergenic 30.0%
! CTTTCCAAATTCTAAAGATG+TGG + chr7_3:39719746-39719765 None:intergenic 30.0%
GTACATAAACTCAAATCAGA+AGG - chr7_3:39719957-39719976 Msa1103620:five_prime_UTR 30.0%
AATTTATAGGACACACAAGA+TGG + chr7_3:39719989-39720008 None:intergenic 30.0%
TGTGTGTCCTATAAATTCTT+TGG - chr7_3:39719992-39720011 Msa1103620:five_prime_UTR 30.0%
GGAGAATATTCATTGCTAAA+CGG - chr7_3:39720016-39720035 Msa1103620:five_prime_UTR 30.0%
TATTGTATTGTTCACCTTGA+AGG - chr7_3:39720273-39720292 Msa1103620:intron 30.0%
CATTAAAGATCAGTTTCTTG+TGG + chr7_3:39720626-39720645 None:intergenic 30.0%
!! GATACGTTTGATTTTGACAA+TGG - chr7_3:39720712-39720731 Msa1103620:intron 30.0%
! TGTTCATTTCCTTTTCTGTT+TGG - chr7_3:39720984-39721003 Msa1103620:intron 30.0%
TCTAAATACCATACAGTTCA+TGG + chr7_3:39721192-39721211 None:intergenic 30.0%
AAGGACCTAACATAAAGTTG+AGG + chr7_3:39710352-39710371 None:intergenic 35.0%
ACAGTAAGTATACACAGTCA+AGG + chr7_3:39710897-39710916 None:intergenic 35.0%
GCTATTTACTGACAACACTA+AGG - chr7_3:39710457-39710476 Msa1103620:CDS 35.0%
!! GCAATCTTTTGATTACTCTG+CGG - chr7_3:39710609-39710628 Msa1103620:intron 35.0%
CGAAATTTCACTAAGATCCT+TGG + chr7_3:39710781-39710800 None:intergenic 35.0%
AATGACCTAACAGTAAGTTG+AGG - chr7_3:39710844-39710863 Msa1103620:intron 35.0%
GTGTATACTTACTGTCAGTT+AGG + chr7_3:39710376-39710395 None:intergenic 35.0%
! ATAACGAAAGTGTAGAGTCA+GGG - chr7_3:39711071-39711090 Msa1103620:intron 35.0%
CACTAGTAACATTGTGTAGT+TGG - chr7_3:39711228-39711247 Msa1103620:intron 35.0%
GTAACATTGTGTAGTTGGAT+TGG - chr7_3:39711233-39711252 Msa1103620:intron 35.0%
TTCTCCATCTAAGAAAACTC+TGG + chr7_3:39711395-39711414 None:intergenic 35.0%
! TGTTTTGCTTTCCAACATTC+GGG - chr7_3:39711472-39711491 Msa1103620:intron 35.0%
CGGCTAAACTACTTGATAAA+TGG + chr7_3:39711621-39711640 None:intergenic 35.0%
GCCGATAGAATTCATTTCTA+AGG - chr7_3:39711637-39711656 Msa1103620:intron 35.0%
! AGGTAAATAAGTAGGGTGTT+CGG - chr7_3:39711657-39711676 Msa1103620:intron 35.0%
GTCTCTGCATATAACAATGT+AGG - chr7_3:39711693-39711712 Msa1103620:CDS 35.0%
ATCTTCATCATCTTAAGTGG+TGG - chr7_3:39711886-39711905 Msa1103620:intron 35.0%
TCTTCATCATCTTAAGTGGT+GGG - chr7_3:39711887-39711906 Msa1103620:intron 35.0%
!!! GGTTTTTTTTCATGAGCATC+TGG - chr7_3:39712028-39712047 Msa1103620:intron 35.0%
TGAGTATAGCTCAATTCACA+TGG + chr7_3:39712395-39712414 None:intergenic 35.0%
TGTGAATTGAGCTATACTCA+CGG - chr7_3:39712395-39712414 Msa1103620:intron 35.0%
AGACGGTATAAAACAGGAAA+TGG + chr7_3:39712481-39712500 None:intergenic 35.0%
GTAATTATTGGCCATATCCA+TGG - chr7_3:39712752-39712771 Msa1103620:intron 35.0%
TATGGCTAAAACCATGGATA+TGG + chr7_3:39712766-39712785 None:intergenic 35.0%
!!! ATATCCATGGTTTTAGCCAT+AGG - chr7_3:39712765-39712784 Msa1103620:intron 35.0%
AAGACCAGCGTAATTCAAAT+TGG - chr7_3:39712851-39712870 Msa1103620:intron 35.0%
TTCTCCAATTTGAATTACGC+TGG + chr7_3:39712858-39712877 None:intergenic 35.0%
AGCGTAATTCAAATTGGAGA+AGG - chr7_3:39712857-39712876 Msa1103620:intron 35.0%
!!! TTCCCACGTAGCTTTTTTTT+TGG - chr7_3:39712950-39712969 Msa1103620:intron 35.0%
CACCAAAAAAAAAGCTACGT+GGG + chr7_3:39712955-39712974 None:intergenic 35.0%
ACACCAAAAAAAAAGCTACG+TGG + chr7_3:39712956-39712975 None:intergenic 35.0%
!!! CGTAGCTTTTTTTTTGGTGT+TGG - chr7_3:39712956-39712975 Msa1103620:five_prime_UTR 35.0%
! TTTTAGCATATGTACCTGAC+CGG + chr7_3:39712990-39713009 None:intergenic 35.0%
TGACTGTAGATTGAAGAAAG+TGG - chr7_3:39713075-39713094 Msa1103620:five_prime_UTR 35.0%
TGTATCCCCTCTATATATAC+AGG + chr7_3:39713148-39713167 None:intergenic 35.0%
ATTAGTGTCTGTCTTTCTAC+CGG - chr7_3:39713413-39713432 Msa1103620:intron 35.0%
TGTGAATGAGAAAAGAGTAG+TGG - chr7_3:39714075-39714094 Msa1103620:intron 35.0%
GGGAGAGAAAAAATGTGAAT+GGG + chr7_3:39714104-39714123 None:intergenic 35.0%
AGGGAGAGAAAAAATGTGAA+TGG + chr7_3:39714105-39714124 None:intergenic 35.0%
AAGGAGATAGGAGAAATCAA+GGG + chr7_3:39714124-39714143 None:intergenic 35.0%
AAAGGAGATAGGAGAAATCA+AGG + chr7_3:39714125-39714144 None:intergenic 35.0%
! CCCTTAATCTTCATTTTGGA+TGG + chr7_3:39714182-39714201 None:intergenic 35.0%
! CATCCCCTTAATCTTCATTT+TGG + chr7_3:39714186-39714205 None:intergenic 35.0%
CAAAATGAAGATTAAGGGGA+TGG - chr7_3:39714184-39714203 Msa1103620:intron 35.0%
AAATGAAGATTAAGGGGATG+GGG - chr7_3:39714186-39714205 Msa1103620:intron 35.0%
TAACAAGCAGAAGCTTATTC+CGG - chr7_3:39714368-39714387 Msa1103620:intron 35.0%
! TGAGCATTGCAAGAGATATA+AGG - chr7_3:39714415-39714434 Msa1103620:intron 35.0%
GACGATTAGAATCGAGATTA+AGG + chr7_3:39714628-39714647 None:intergenic 35.0%
!! TACAAGAAGTACTTAAGTCC+AGG - chr7_3:39714750-39714769 Msa1103620:five_prime_UTR 35.0%
! TCTTCTTTGTTACTTAGACC+TGG + chr7_3:39714771-39714790 None:intergenic 35.0%
!! TTTTAGACCAGAGATTTGGT+GGG + chr7_3:39714857-39714876 None:intergenic 35.0%
! ATTTTAGACCAGAGATTTGG+TGG + chr7_3:39714858-39714877 None:intergenic 35.0%
GATTTATAGCCATCCACAAT+GGG + chr7_3:39714891-39714910 None:intergenic 35.0%
AGATTTATAGCCATCCACAA+TGG + chr7_3:39714892-39714911 None:intergenic 35.0%
ATTATGGTGTGTTTGGATGA+TGG - chr7_3:39714951-39714970 Msa1103620:intron 35.0%
! TGTTTGGATGATGGTTTAAG+AGG - chr7_3:39714960-39714979 Msa1103620:intron 35.0%
! GTTTGGATGATGGTTTAAGA+GGG - chr7_3:39714961-39714980 Msa1103620:intron 35.0%
! TTTGGATGATGGTTTAAGAG+GGG - chr7_3:39714962-39714981 Msa1103620:intron 35.0%
! ACATCTACAAGGTGTGTTTT+TGG + chr7_3:39715181-39715200 None:intergenic 35.0%
TGCAAACAAAAGAATTTGGG+AGG - chr7_3:39715344-39715363 Msa1103620:intron 35.0%
AGGACTCAGCTTGAAAAATT+TGG - chr7_3:39715364-39715383 Msa1103620:intron 35.0%
TCCATATTTAAAGGGGAGTA+GGG + chr7_3:39715462-39715481 None:intergenic 35.0%
TTCCATATTTAAAGGGGAGT+AGG + chr7_3:39715463-39715482 None:intergenic 35.0%
!! TAGGATAATGGGTAATGTAG+TGG + chr7_3:39715635-39715654 None:intergenic 35.0%
TCGCAAAATCGTAGGATATT+AGG - chr7_3:39715740-39715759 Msa1103620:intron 35.0%
AATCATTTCATGGGATACGA+AGG - chr7_3:39715839-39715858 Msa1103620:intron 35.0%
GAAAACATTGGCAAAAGCTT+CGG - chr7_3:39715873-39715892 Msa1103620:intron 35.0%
AAAGGTGAAACCCTTATCAT+GGG - chr7_3:39715991-39716010 Msa1103620:intron 35.0%
TGGCATATCCAATTTCCAAT+AGG - chr7_3:39716065-39716084 Msa1103620:intron 35.0%
CTACCATGGCATCAATAAAT+TGG + chr7_3:39716120-39716139 None:intergenic 35.0%
TGTTACCAAAAACACTACCA+TGG + chr7_3:39716134-39716153 None:intergenic 35.0%
CTTACAGATTCTCCATATGT+TGG - chr7_3:39716468-39716487 Msa1103620:intron 35.0%
TATTACTCTGCTCCAACATA+TGG + chr7_3:39716483-39716502 None:intergenic 35.0%
! ATTTTCATAGTAGTGTGGGA+TGG - chr7_3:39716956-39716975 Msa1103620:intron 35.0%
!! TAGGTCTAGTTCTATAGCAT+AGG - chr7_3:39717015-39717034 Msa1103620:intron 35.0%
!! AGGTCTAGTTCTATAGCATA+GGG - chr7_3:39717016-39717035 Msa1103620:intron 35.0%
CAAACAAAATGCTAACGGAA+AGG - chr7_3:39717161-39717180 Msa1103620:intron 35.0%
ATGTGATTAGAGTGACCATT+TGG + chr7_3:39717368-39717387 None:intergenic 35.0%
TCAACAACCACTTGTATAGA+TGG - chr7_3:39717590-39717609 Msa1103620:intron 35.0%
TAAGGTTCCATCTATACAAG+TGG + chr7_3:39717600-39717619 None:intergenic 35.0%
ATAGATGGAACCTTAAAAGG+AGG - chr7_3:39717605-39717624 Msa1103620:intron 35.0%
ATCAACGAGTTACTCAACAA+TGG - chr7_3:39717665-39717684 Msa1103620:intron 35.0%
ACATGATCCTTTAAATGTGC+AGG - chr7_3:39717780-39717799 Msa1103620:intron 35.0%
AAGTGCAGGATATTCACAAA+AGG + chr7_3:39717813-39717832 None:intergenic 35.0%
GCTCTTCAACAAAATATTGG+CGG - chr7_3:39717846-39717865 Msa1103620:intron 35.0%
GATCACCATATGTTTCGAAT+AGG + chr7_3:39718053-39718072 None:intergenic 35.0%
ATGGTGATCGAGTGAAATAT+TGG - chr7_3:39718064-39718083 Msa1103620:intron 35.0%
TTATACATAGCTTGGAGTTC+CGG + chr7_3:39718105-39718124 None:intergenic 35.0%
TAACAGATTTCAAATGGGGA+TGG - chr7_3:39718645-39718664 Msa1103620:intron 35.0%
!!! GTTTTAGAGCCATTGTTCAA+CGG - chr7_3:39718850-39718869 Msa1103620:intron 35.0%
!!! TTTTAGAGCCATTGTTCAAC+GGG - chr7_3:39718851-39718870 Msa1103620:intron 35.0%
!!! ATTGCAGTTTTGAATGTGGA+AGG - chr7_3:39719257-39719276 Msa1103620:intron 35.0%
AATGTGGAAGGAAAAACTCT+TGG - chr7_3:39719269-39719288 Msa1103620:intron 35.0%
TCTACATCACTGAAAATGGT+TGG - chr7_3:39719511-39719530 Msa1103620:intron 35.0%
!! GGATTTGGGATTTTGTAAGA+AGG + chr7_3:39719643-39719662 None:intergenic 35.0%
! GTTCGTCTTTCAATGGATTT+GGG + chr7_3:39719657-39719676 None:intergenic 35.0%
! TGTTCGTCTTTCAATGGATT+TGG + chr7_3:39719658-39719677 None:intergenic 35.0%
GTGTCCTATAAATTCTTTGG+CGG - chr7_3:39719995-39720014 Msa1103620:five_prime_UTR 35.0%
TTCTCCGCCAAAGAATTTAT+AGG + chr7_3:39720002-39720021 None:intergenic 35.0%
GAATATTCATTGCTAAACGG+CGG - chr7_3:39720019-39720038 Msa1103620:intron 35.0%
GTGGAAACTTGATACATACA+TGG - chr7_3:39720041-39720060 Msa1103620:intron 35.0%
CTTGATACATACATGGTAAC+TGG - chr7_3:39720048-39720067 Msa1103620:intron 35.0%
TACTGACAAACACAGCTAAA+TGG - chr7_3:39720791-39720810 Msa1103620:intron 35.0%
CTTAGAAGTCCAAACAGAAA+AGG + chr7_3:39720996-39721015 None:intergenic 35.0%
TTTCTGTTTGGACTTCTAAG+AGG - chr7_3:39720996-39721015 Msa1103620:intron 35.0%
AAGTTGTTCCATGAACTGTA+TGG - chr7_3:39721181-39721200 Msa1103620:five_prime_UTR 35.0%
! ATAACGGAAGTGTAGAGTCA+AGG + chr7_3:39710124-39710143 None:intergenic 40.0%
GCTACTTACTGACAACACTA+AGG + chr7_3:39710739-39710758 None:intergenic 40.0%
GTTAAACCAACAACTTGCCA+AGG - chr7_3:39710761-39710780 Msa1103620:intron 40.0%
TAAGATCCTTGGCAAGTTGT+TGG + chr7_3:39710770-39710789 None:intergenic 40.0%
AAATTTCGTGCTTACCGTCA+GGG - chr7_3:39710793-39710812 Msa1103620:intron 40.0%
! GATAACGAAAGTGTAGAGTC+AGG - chr7_3:39711070-39711089 Msa1103620:intron 40.0%
TGTCATTGTCAAAGTAGTGC+GGG + chr7_3:39711210-39711229 None:intergenic 40.0%
! GTGTCATTGTCAAAGTAGTG+CGG + chr7_3:39711211-39711230 None:intergenic 40.0%
GTGAATGGGAGAGAAGATAA+TGG - chr7_3:39711934-39711953 Msa1103620:intron 40.0%
! TGTCCTTACTAGCTTAGCTA+AGG - chr7_3:39712172-39712191 Msa1103620:CDS 40.0%
! GTCCTTACTAGCTTAGCTAA+GGG - chr7_3:39712173-39712192 Msa1103620:CDS 40.0%
TGACGAAGACGGTATAAAAC+AGG + chr7_3:39712487-39712506 None:intergenic 40.0%
GTAGATAAGTCACGTTGAGA+TGG + chr7_3:39712725-39712744 None:intergenic 40.0%
ACGTGACTTATCTACTTCAC+AGG - chr7_3:39712730-39712749 Msa1103620:intron 40.0%
ATTCATCAAGCTTTCCGAAC+CGG - chr7_3:39712921-39712940 Msa1103620:intron 40.0%
GCTAAAAAGTCACAGACCTA+TGG - chr7_3:39713003-39713022 Msa1103620:five_prime_UTR 40.0%
GAAGAAAGTGGATATCATGG+AGG - chr7_3:39713087-39713106 Msa1103620:five_prime_UTR 40.0%
! AGAGGGCTTGGTATATTTGA+CGG - chr7_3:39713111-39713130 Msa1103620:five_prime_UTR 40.0%
!!! TTTTTTTGTCACAGAGGGTG+AGG - chr7_3:39714147-39714166 Msa1103620:intron 40.0%
TAGAGATCTTTGTGCTCAGT+TGG + chr7_3:39714824-39714843 None:intergenic 40.0%
ACCAAATTACCCATTGTGGA+TGG - chr7_3:39714879-39714898 Msa1103620:intron 40.0%
AGAGGGAATTATGGTGTGTT+TGG - chr7_3:39714944-39714963 Msa1103620:intron 40.0%
GCGTGATAACAACATCTACA+AGG + chr7_3:39715192-39715211 None:intergenic 40.0%
!! AGAAAGTAACCTGGATTAGC+TGG - chr7_3:39715312-39715331 Msa1103620:intron 40.0%
! CACATTTTTCCAGCTAATCC+AGG + chr7_3:39715324-39715343 None:intergenic 40.0%
CATATTTAAAGGGGAGTAGG+GGG + chr7_3:39715460-39715479 None:intergenic 40.0%
CCATATTTAAAGGGGAGTAG+GGG + chr7_3:39715461-39715480 None:intergenic 40.0%
TATTATCGAATGGGGATGAC+CGG - chr7_3:39715794-39715813 Msa1103620:intron 40.0%
AATGTTGTAATGGTGTACCC+CGG + chr7_3:39715816-39715835 None:intergenic 40.0%
AAAAGCTTCGGCACATTATG+TGG - chr7_3:39715885-39715904 Msa1103620:intron 40.0%
TTTGGTCGTTATGGACAATG+AGG - chr7_3:39715918-39715937 Msa1103620:intron 40.0%
CTTTAACGAGGCGATTTCAA+AGG - chr7_3:39715973-39715992 Msa1103620:intron 40.0%
CAAAGGTGAAACCCTTATCA+TGG - chr7_3:39715990-39716009 Msa1103620:intron 40.0%
AAGGTGAAACCCTTATCATG+GGG - chr7_3:39715992-39716011 Msa1103620:intron 40.0%
ATGAACAAGCCCCATGATAA+GGG + chr7_3:39716004-39716023 None:intergenic 40.0%
AATGAACAAGCCCCATGATA+AGG + chr7_3:39716005-39716024 None:intergenic 40.0%
TTAGTTGATCCCTTTCAGAC+TGG - chr7_3:39716041-39716060 Msa1103620:intron 40.0%
ATATGCCAACCAGTCTGAAA+GGG + chr7_3:39716053-39716072 None:intergenic 40.0%
!! TGATGCCATGGTAGTGTTTT+TGG - chr7_3:39716126-39716145 Msa1103620:intron 40.0%
TGAACAAGAGAATGGGAGAT+TGG + chr7_3:39716161-39716180 None:intergenic 40.0%
GTGCAACGATTGAAGAAACT+TGG - chr7_3:39716437-39716456 Msa1103620:intron 40.0%
ATGTCTTGGAACAACAGTCT+TGG - chr7_3:39716821-39716840 Msa1103620:intron 40.0%
GAGCTCCTATTCGAAACATA+TGG - chr7_3:39718045-39718064 Msa1103620:intron 40.0%
TTGGACTACATTCAATGAGC+CGG - chr7_3:39718083-39718102 Msa1103620:five_prime_UTR 40.0%
TCTAGGTTCTTATTCTACGG+AGG - chr7_3:39718137-39718156 Msa1103620:intron 40.0%
TTTGACATAGGCAGTTCAAG+AGG - chr7_3:39718541-39718560 Msa1103620:intron 40.0%
TTGACATAGGCAGTTCAAGA+GGG - chr7_3:39718542-39718561 Msa1103620:intron 40.0%
!! AATGGCTCTAAAACCCTGAA+AGG + chr7_3:39718844-39718863 None:intergenic 40.0%
! TTTAGAGCCATTGTTCAACG+GGG - chr7_3:39718852-39718871 Msa1103620:intron 40.0%
TTTACCTTCTGTAACAGCCA+AGG + chr7_3:39719052-39719071 None:intergenic 40.0%
TTGTGACATCCTCTCTTTGT+AGG - chr7_3:39719613-39719632 Msa1103620:intron 40.0%
GAAGGAATTCCTACAAAGAG+AGG + chr7_3:39719625-39719644 None:intergenic 40.0%
GTTCGATGTTCGTCTTTCAA+TGG + chr7_3:39719664-39719683 None:intergenic 40.0%
TAAAGGATGCAACTCCTTCA+AGG + chr7_3:39720290-39720309 None:intergenic 40.0%
! ACGTTCGTGGATATTTTGCA+TGG - chr7_3:39720680-39720699 Msa1103620:intron 40.0%
! CGTTCGTGGATATTTTGCAT+GGG - chr7_3:39720681-39720700 Msa1103620:intron 40.0%
!! TGTTGATTGGTCTCTCAACT+TGG - chr7_3:39720859-39720878 Msa1103620:intron 40.0%
TCAACTTGGAGAAATGGCAA+GGG - chr7_3:39720873-39720892 Msa1103620:intron 40.0%
GGCAGGGACTAAAGTGATAA+CGG + chr7_3:39711055-39711074 None:intergenic 45.0%
! AAGGAGTATGACGTGTCACA+TGG - chr7_3:39710199-39710218 Msa1103620:three_prime_UTR 45.0%
GAAATTTCGTGCTTACCGTC+AGG - chr7_3:39710792-39710811 Msa1103620:intron 45.0%
! AAGGAGTATGACGTGTCACA+GGG + chr7_3:39710199-39710218 None:intergenic 45.0%
AAATGCTCAAACCTTGTGCC+TGG + chr7_3:39711499-39711518 None:intergenic 45.0%
! TGGAAGCATGAGGATGTGAA+TGG - chr7_3:39711919-39711938 Msa1103620:CDS 45.0%
! GGAAGCATGAGGATGTGAAT+GGG - chr7_3:39711920-39711939 Msa1103620:CDS 45.0%
GTCCCTTAGCTAAGCTAGTA+AGG + chr7_3:39712178-39712197 None:intergenic 45.0%
TGTGCCTATGGCTAAAACCA+TGG + chr7_3:39712772-39712791 None:intergenic 45.0%
!! TTTGGTGTTGGAACTTCAGC+CGG - chr7_3:39712968-39712987 Msa1103620:five_prime_UTR 45.0%
AGTGGATATCATGGAGGAAG+AGG - chr7_3:39713093-39713112 Msa1103620:five_prime_UTR 45.0%
GTGGATATCATGGAGGAAGA+GGG - chr7_3:39713094-39713113 Msa1103620:five_prime_UTR 45.0%
TTGTGCTCAGTTGGTTGTCT+GGG + chr7_3:39714815-39714834 None:intergenic 45.0%
TTTGTGCTCAGTTGGTTGTC+TGG + chr7_3:39714816-39714835 None:intergenic 45.0%
GCCATCCACAATGGGTAATT+TGG + chr7_3:39714883-39714902 None:intergenic 45.0%
CCCCTACTCCCCTTTAAATA+TGG - chr7_3:39715458-39715477 Msa1103620:intron 45.0%
ATTATCGAATGGGGATGACC+GGG - chr7_3:39715795-39715814 Msa1103620:intron 45.0%
TTGATCCCTTTCAGACTGGT+TGG - chr7_3:39716045-39716064 Msa1103620:intron 45.0%
GATATGCCAACCAGTCTGAA+AGG + chr7_3:39716054-39716073 None:intergenic 45.0%
TGTTGGAGCAGAGTAATACC+AGG - chr7_3:39716485-39716504 Msa1103620:intron 45.0%
! CTAGTGGATAGTCAAAGTGC+AGG + chr7_3:39717827-39717846 None:intergenic 45.0%
GCAGTTCAAGAGGGAGAAAT+TGG - chr7_3:39718551-39718570 Msa1103620:intron 45.0%
TCCTGAGGCTTGGAACTATA+GGG + chr7_3:39718605-39718624 None:intergenic 45.0%
ATCCTGAGGCTTGGAACTAT+AGG + chr7_3:39718606-39718625 None:intergenic 45.0%
! GCGTTTGATTTCGCCTTTCA+GGG - chr7_3:39718828-39718847 Msa1103620:intron 45.0%
GGATAATCCCCGTTGAACAA+TGG + chr7_3:39718862-39718881 None:intergenic 45.0%
TGTAACTATGTCTACCCCGA+AGG - chr7_3:39719438-39719457 Msa1103620:intron 45.0%
TATTCATTGCTAAACGGCGG+TGG - chr7_3:39720022-39720041 Msa1103620:intron 45.0%
GGTCTCTCAACTTGGAGAAA+TGG - chr7_3:39720867-39720886 Msa1103620:intron 45.0%
CTCAACTTGGAGAAATGGCA+AGG - chr7_3:39720872-39720891 Msa1103620:intron 45.0%
!!! ATAATTTTTTTTTTTTTTGA+GGG + chr7_3:39713227-39713246 None:intergenic 5.0%
!!! TATAATTTTTTTTTTTTTTG+AGG + chr7_3:39713228-39713247 None:intergenic 5.0%
!!! ATAATATTATAAGTTTTTTT+AGG - chr7_3:39714523-39714542 Msa1103620:intron 5.0%
!!! TAATATTATAAGTTTTTTTA+GGG - chr7_3:39714524-39714543 Msa1103620:intron 5.0%
!!! AATTATAATATATTTTTATG+AGG + chr7_3:39714570-39714589 None:intergenic 5.0%
!!! ATATATATATATATTTTCTT+TGG - chr7_3:39718771-39718790 Msa1103620:intron 5.0%
!!! AACTTAATTATATTTTTTTT+AGG - chr7_3:39719350-39719369 Msa1103620:intron 5.0%
!! ACTAAAATTATAAATATTAA+AGG + chr7_3:39720307-39720326 None:intergenic 5.0%
ACTGTCAGTTAGGTCCCTGA+CGG + chr7_3:39710810-39710829 None:intergenic 50.0%
! CAAGGAGTATGACGTGTCAC+AGG + chr7_3:39710198-39710217 None:intergenic 50.0%
GTCACATAGATCCCTGACTC+AGG + chr7_3:39711114-39711133 None:intergenic 50.0%
CGTTGAGATGGTTTCTGCGA+GGG + chr7_3:39712713-39712732 None:intergenic 50.0%
ACGTTGAGATGGTTTCTGCG+AGG + chr7_3:39712714-39712733 None:intergenic 50.0%
AGCTACGTGGGAATGAAGTC+CGG + chr7_3:39712943-39712962 None:intergenic 50.0%
TATCATGGAGGAAGAGGGCT+TGG - chr7_3:39713099-39713118 Msa1103620:five_prime_UTR 50.0%
TGTGCTCAGTTGGTTGTCTG+GGG + chr7_3:39714814-39714833 None:intergenic 50.0%
!! AGACCAGAGATTTGGTGGGA+GGG + chr7_3:39714853-39714872 None:intergenic 50.0%
!! TAGACCAGAGATTTGGTGGG+AGG + chr7_3:39714854-39714873 None:intergenic 50.0%
ATGGTTTAAGAGGGGAAGCG+AGG - chr7_3:39714970-39714989 Msa1103620:intron 50.0%
TGGTTTAAGAGGGGAAGCGA+GGG - chr7_3:39714971-39714990 Msa1103620:intron 50.0%
TTATCGAATGGGGATGACCG+GGG - chr7_3:39715796-39715815 Msa1103620:intron 50.0%
TCCCTATAGTTCCAAGCCTC+AGG - chr7_3:39718601-39718620 Msa1103620:intron 50.0%
TAGTTCCAAGCCTCAGGATG+TGG - chr7_3:39718607-39718626 Msa1103620:intron 50.0%
! GGCGTTTGATTTCGCCTTTC+AGG - chr7_3:39718827-39718846 Msa1103620:intron 50.0%
GATGCCTTGGCTGTTACAGA+AGG - chr7_3:39719045-39719064 Msa1103620:intron 50.0%
TCTACCCCTCGCTGTCACAT+AGG - chr7_3:39710068-39710087 Msa1103620:three_prime_UTR 55.0%
AGGGACCTATGTGACAGCGA+GGG + chr7_3:39710076-39710095 None:intergenic 55.0%
GTCACATAGGTCCCTGACTC+AGG - chr7_3:39710081-39710100 Msa1103620:three_prime_UTR 55.0%
GATGATGTGGCACGCTGACA+AGG - chr7_3:39710180-39710199 Msa1103620:three_prime_UTR 55.0%
GATGATGTGGCACGCTGACA+AGG + chr7_3:39710180-39710199 None:intergenic 55.0%
GCTTTCCAACATTCGGGTCC+AGG - chr7_3:39711478-39711497 Msa1103620:intron 55.0%
TTGTGCCTGGACCCGAATGT+TGG + chr7_3:39711486-39711505 None:intergenic 55.0%
AACATTCGGGTCCAGGCACA+AGG - chr7_3:39711485-39711504 Msa1103620:intron 55.0%
!! TAAGTGGTGGGTGAGCGAGT+TGG - chr7_3:39711899-39711918 Msa1103620:intron 55.0%
! GTGAGCGAGTTGGAAGCATG+AGG - chr7_3:39711909-39711928 Msa1103620:intron 55.0%
CGTGGGAATGAAGTCCGGTT+CGG + chr7_3:39712938-39712957 None:intergenic 55.0%
TGTTGGAACTTCAGCCGGTC+AGG - chr7_3:39712973-39712992 Msa1103620:five_prime_UTR 55.0%
TGTCACAGAGGGTGAGGATG+TGG - chr7_3:39714153-39714172 Msa1103620:intron 55.0%
GTCACAGAGGGTGAGGATGT+GGG - chr7_3:39714154-39714173 Msa1103620:intron 55.0%
GTGCTCAGTTGGTTGTCTGG+GGG + chr7_3:39714813-39714832 None:intergenic 55.0%
GGTTTAAGAGGGGAAGCGAG+GGG - chr7_3:39714972-39714991 Msa1103620:intron 55.0%
AGCATCCACATCCTGAGGCT+TGG + chr7_3:39718615-39718634 None:intergenic 55.0%
TGAGCAGCATCCACATCCTG+AGG + chr7_3:39718620-39718639 None:intergenic 55.0%
AGTGACGGCGTAAACGTTCG+TGG - chr7_3:39720667-39720686 Msa1103620:intron 55.0%
GACAGCGAGGGGTAGAGTCA+GGG + chr7_3:39710064-39710083 None:intergenic 60.0%
TGACAGCGAGGGGTAGAGTC+AGG + chr7_3:39710065-39710084 None:intergenic 60.0%
GGGACCTATGTGACAGCGAG+GGG + chr7_3:39710075-39710094 None:intergenic 60.0%
CAGGGACCTATGTGACAGCG+AGG + chr7_3:39710077-39710096 None:intergenic 60.0%
CGTCCCTCCCACCAAATCTC+TGG - chr7_3:39714847-39714866 Msa1103620:intron 60.0%
TTAAGAGGGGAAGCGAGGGG+AGG - chr7_3:39714975-39714994 Msa1103620:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 39709936 39721278 39709936 ID=Msa1103620;Name=Msa1103620
chr7_3 mRNA 39709936 39721278 39709936 ID=Msa1103620-mRNA-1;Parent=Msa1103620;Name=Msa1103620-mRNA-1;_AED=0.12;_eAED=0.12;_QI=1278|0.93|0.94|1|0.68|0.70|17|429|209
chr7_3 exon 39709936 39710545 39709936 ID=Msa1103620-mRNA-1:exon:8139;Parent=Msa1103620-mRNA-1
chr7_3 exon 39711486 39711579 39711486 ID=Msa1103620-mRNA-1:exon:8138;Parent=Msa1103620-mRNA-1
chr7_3 exon 39711686 39711788 39711686 ID=Msa1103620-mRNA-1:exon:8137;Parent=Msa1103620-mRNA-1
chr7_3 exon 39711916 39711950 39711916 ID=Msa1103620-mRNA-1:exon:8136;Parent=Msa1103620-mRNA-1
chr7_3 exon 39712148 39712355 39712148 ID=Msa1103620-mRNA-1:exon:8135;Parent=Msa1103620-mRNA-1
chr7_3 exon 39712548 39712663 39712548 ID=Msa1103620-mRNA-1:exon:8134;Parent=Msa1103620-mRNA-1
chr7_3 exon 39712954 39713191 39712954 ID=Msa1103620-mRNA-1:exon:8133;Parent=Msa1103620-mRNA-1
chr7_3 exon 39713325 39713412 39713325 ID=Msa1103620-mRNA-1:exon:8132;Parent=Msa1103620-mRNA-1
chr7_3 exon 39713528 39713605 39713528 ID=Msa1103620-mRNA-1:exon:8131;Parent=Msa1103620-mRNA-1
chr7_3 exon 39714708 39714783 39714708 ID=Msa1103620-mRNA-1:exon:8130;Parent=Msa1103620-mRNA-1
chr7_3 exon 39716778 39716836 39716778 ID=Msa1103620-mRNA-1:exon:8129;Parent=Msa1103620-mRNA-1
chr7_3 exon 39718082 39718130 39718082 ID=Msa1103620-mRNA-1:exon:8128;Parent=Msa1103620-mRNA-1
chr7_3 exon 39718220 39718360 39718220 ID=Msa1103620-mRNA-1:exon:8127;Parent=Msa1103620-mRNA-1
chr7_3 exon 39718463 39718518 39718463 ID=Msa1103620-mRNA-1:exon:8126;Parent=Msa1103620-mRNA-1
chr7_3 exon 39719708 39719850 39719708 ID=Msa1103620-mRNA-1:exon:8125;Parent=Msa1103620-mRNA-1
chr7_3 exon 39719894 39720037 39719894 ID=Msa1103620-mRNA-1:exon:8124;Parent=Msa1103620-mRNA-1
chr7_3 exon 39721180 39721278 39721180 ID=Msa1103620-mRNA-1:exon:8123;Parent=Msa1103620-mRNA-1
chr7_3 five_prime_UTR 39721180 39721278 39721180 ID=Msa1103620-mRNA-1:five_prime_utr;Parent=Msa1103620-mRNA-1
chr7_3 five_prime_UTR 39719894 39720037 39719894 ID=Msa1103620-mRNA-1:five_prime_utr;Parent=Msa1103620-mRNA-1
chr7_3 five_prime_UTR 39719708 39719850 39719708 ID=Msa1103620-mRNA-1:five_prime_utr;Parent=Msa1103620-mRNA-1
chr7_3 five_prime_UTR 39718463 39718518 39718463 ID=Msa1103620-mRNA-1:five_prime_utr;Parent=Msa1103620-mRNA-1
chr7_3 five_prime_UTR 39718220 39718360 39718220 ID=Msa1103620-mRNA-1:five_prime_utr;Parent=Msa1103620-mRNA-1
chr7_3 five_prime_UTR 39718082 39718130 39718082 ID=Msa1103620-mRNA-1:five_prime_utr;Parent=Msa1103620-mRNA-1
chr7_3 five_prime_UTR 39716778 39716836 39716778 ID=Msa1103620-mRNA-1:five_prime_utr;Parent=Msa1103620-mRNA-1
chr7_3 five_prime_UTR 39714708 39714783 39714708 ID=Msa1103620-mRNA-1:five_prime_utr;Parent=Msa1103620-mRNA-1
chr7_3 five_prime_UTR 39713528 39713605 39713528 ID=Msa1103620-mRNA-1:five_prime_utr;Parent=Msa1103620-mRNA-1
chr7_3 five_prime_UTR 39713325 39713412 39713325 ID=Msa1103620-mRNA-1:five_prime_utr;Parent=Msa1103620-mRNA-1
chr7_3 five_prime_UTR 39712954 39713191 39712954 ID=Msa1103620-mRNA-1:five_prime_utr;Parent=Msa1103620-mRNA-1
chr7_3 five_prime_UTR 39712557 39712663 39712557 ID=Msa1103620-mRNA-1:five_prime_utr;Parent=Msa1103620-mRNA-1
chr7_3 CDS 39712548 39712556 39712548 ID=Msa1103620-mRNA-1:cds;Parent=Msa1103620-mRNA-1
chr7_3 CDS 39712148 39712355 39712148 ID=Msa1103620-mRNA-1:cds;Parent=Msa1103620-mRNA-1
chr7_3 CDS 39711916 39711950 39711916 ID=Msa1103620-mRNA-1:cds;Parent=Msa1103620-mRNA-1
chr7_3 CDS 39711686 39711788 39711686 ID=Msa1103620-mRNA-1:cds;Parent=Msa1103620-mRNA-1
chr7_3 CDS 39711486 39711579 39711486 ID=Msa1103620-mRNA-1:cds;Parent=Msa1103620-mRNA-1
chr7_3 CDS 39710365 39710545 39710365 ID=Msa1103620-mRNA-1:cds;Parent=Msa1103620-mRNA-1
chr7_3 three_prime_UTR 39709936 39710364 39709936 ID=Msa1103620-mRNA-1:three_prime_utr;Parent=Msa1103620-mRNA-1
Gene Sequence

>Msa1103620

ATGGGGATGCCATTGTTCAACGGGGATTATCCAAAAATAATGAGAAAACTAGTGGGGAAAAGACTACCCGAATTCACAACAAATGAGAAAGAAATGTTGAAAGGAAGTACAGACTTTATTGGGATCAATTACTATTACTCTCTCTTTGTTAGACATGAACCAAATAGAACCAAGATTAATCCTATTGACAATTTTGATGCCTTGGCTGTTACAGAAGTTTTGAATGTGGAAGGAAAAACTCTTGGTTACTATGACCAATATGGTTGTAACTATGTCTACCCCGAAGGATTATATAATGTCTTGCTCTACATTAACAAAGAGTATAAAAATCCAAGAATCTACATCACTGAAAATGGAATTCCTTCTTACAAAATCCCAAATCCATTGAAAGACGAACATCGAACTGCTTACATCGCCGCACATATAAATGCTACCAAAGCAGCAATTAATGACGGCGTAAACGTTCGTGGATATTTTGCATGGGCAGCATTTGATACGTTTGATTTTGACAATGGATATTCTAAACATATGGGGCTTTATCATGTCGATTTTGATGATAGTCTCAAACGTATACTGACAAACACAGCTAAATGGTACAAAAAGTATTTGACACTTGATTCGGTACACTAA

Protein sequence

>Msa1103620

MGMPLFNGDYPKIMRKLVGKRLPEFTTNEKEMLKGSTDFIGINYYYSLFVRHEPNRTKINPIDNFDALAVTEVLNVEGKTLGYYDQYGCNYVYPEGLYNVLLYINKEYKNPRIYITENGIPSYKIPNPLKDEHRTAYIAAHINATKAAINDGVNVRGYFAWAAFDTFDFDNGYSKHMGLYHVDFDDSLKRILTNTAKWYKKYLTLDSVH*