Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179610 | XP_013458057.1 | 97.705 | 305 | 5 | 1 | 1 | 305 | 1 | 303 | 0.0 | 612 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179610 | sp|Q9FNN6|SRM1_ARATH | 50.680 | 294 | 95 | 9 | 3 | 285 | 7 | 261 | 1.39e-79 | 246 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1179610 | TF | MYB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011910 | Msa1179610 | 0.807050 | 6.107917e-50 | -8.615850e-47 |
| Msa0015220 | Msa1179610 | 0.830095 | 3.562141e-55 | -8.615850e-47 |
| Msa0021570 | Msa1179610 | 0.800018 | 1.754254e-48 | -8.615850e-47 |
| Msa0028410 | Msa1179610 | 0.838517 | 2.743036e-57 | -8.615850e-47 |
| Msa0028450 | Msa1179610 | 0.808537 | 2.950446e-50 | -8.615850e-47 |
| Msa0045530 | Msa1179610 | 0.812291 | 4.564642e-51 | -8.615850e-47 |
| Msa0067820 | Msa1179610 | 0.802754 | 4.828930e-49 | -8.615850e-47 |
| Msa0079550 | Msa1179610 | 0.806637 | 7.466792e-50 | -8.615850e-47 |
| Msa0092750 | Msa1179610 | 0.841248 | 5.332471e-58 | -8.615850e-47 |
| Msa0094990 | Msa1179610 | 0.816197 | 6.262201e-52 | -8.615850e-47 |
| Msa0114960 | Msa1179610 | 0.808195 | 3.489346e-50 | -8.615850e-47 |
| Msa0118250 | Msa1179610 | 0.824460 | 7.973900e-54 | -8.615850e-47 |
| Msa0120320 | Msa1179610 | 0.800554 | 1.364918e-48 | -8.615850e-47 |
| Msa0612730 | Msa1179610 | 0.803983 | 2.686102e-49 | -8.615850e-47 |
| Msa0621870 | Msa1179610 | 0.809919 | 1.491482e-50 | -8.615850e-47 |
| Msa0626900 | Msa1179610 | 0.828504 | 8.667858e-55 | -8.615850e-47 |
| Msa0652360 | Msa1179610 | 0.812806 | 3.521514e-51 | -8.615850e-47 |
| Msa0653690 | Msa1179610 | 0.801234 | 9.913519e-49 | -8.615850e-47 |
| Msa0657300 | Msa1179610 | 0.800432 | 1.445470e-48 | -8.615850e-47 |
| Msa0663630 | Msa1179610 | 0.800825 | 1.201838e-48 | -8.615850e-47 |
| Msa0665010 | Msa1179610 | 0.811892 | 5.577688e-51 | -8.615850e-47 |
| Msa0666380 | Msa1179610 | 0.802940 | 4.419226e-49 | -8.615850e-47 |
| Msa0669710 | Msa1179610 | 0.807907 | 4.019258e-50 | -8.615850e-47 |
| Msa0669750 | Msa1179610 | 0.809121 | 2.212687e-50 | -8.615850e-47 |
| Msa0681190 | Msa1179610 | 0.800867 | 1.177975e-48 | -8.615850e-47 |
| Msa0689980 | Msa1179610 | 0.812029 | 5.208058e-51 | -8.615850e-47 |
| Msa0706300 | Msa1179610 | 0.827509 | 1.504001e-54 | -8.615850e-47 |
| Msa0719330 | Msa1179610 | 0.803441 | 3.481637e-49 | -8.615850e-47 |
| Msa0748470 | Msa1179610 | 0.805315 | 1.416266e-49 | -8.615850e-47 |
| Msa0748980 | Msa1179610 | 0.815532 | 8.811119e-52 | -8.615850e-47 |
| Msa0752830 | Msa1179610 | 0.809752 | 1.619686e-50 | -8.615850e-47 |
| Msa0761930 | Msa1179610 | 0.801379 | 9.257386e-49 | -8.615850e-47 |
| Msa0766540 | Msa1179610 | 0.804507 | 2.089446e-49 | -8.615850e-47 |
| Msa0772530 | Msa1179610 | 0.809318 | 2.007849e-50 | -8.615850e-47 |
| Msa0813310 | Msa1179610 | 0.812520 | 4.067541e-51 | -8.615850e-47 |
| Msa0825520 | Msa1179610 | 0.822112 | 2.819267e-53 | -8.615850e-47 |
| Msa0837040 | Msa1179610 | 0.808762 | 2.640835e-50 | -8.615850e-47 |
| Msa0841570 | Msa1179610 | 0.804227 | 2.390757e-49 | -8.615850e-47 |
| Msa0124070 | Msa1179610 | 0.830351 | 3.084530e-55 | -8.615850e-47 |
| Msa0131230 | Msa1179610 | 0.805951 | 1.041490e-49 | -8.615850e-47 |
| Msa0164580 | Msa1179610 | 0.812573 | 3.960114e-51 | -8.615850e-47 |
| Msa0170550 | Msa1179610 | 0.808622 | 2.829579e-50 | -8.615850e-47 |
| Msa0196620 | Msa1179610 | 0.808939 | 2.420938e-50 | -8.615850e-47 |
| Msa0196630 | Msa1179610 | 0.800044 | 1.733689e-48 | -8.615850e-47 |
| Msa0197600 | Msa1179610 | 0.837681 | 4.501984e-57 | -8.615850e-47 |
| Msa0203330 | Msa1179610 | 0.810993 | 8.742035e-51 | -8.615850e-47 |
| Msa0213020 | Msa1179610 | 0.825504 | 4.522051e-54 | -8.615850e-47 |
| Msa0224980 | Msa1179610 | 0.800732 | 1.255197e-48 | -8.615850e-47 |
| Msa0225030 | Msa1179610 | 0.803345 | 3.643548e-49 | -8.615850e-47 |
| Msa0236350 | Msa1179610 | 0.803101 | 4.094229e-49 | -8.615850e-47 |
| Msa0370690 | Msa1179610 | 0.805546 | 1.267023e-49 | -8.615850e-47 |
| Msa0371050 | Msa1179610 | 0.810049 | 1.398544e-50 | -8.615850e-47 |
| Msa0371640 | Msa1179610 | 0.808510 | 2.989311e-50 | -8.615850e-47 |
| Msa0372550 | Msa1179610 | 0.815360 | 9.623039e-52 | -8.615850e-47 |
| Msa0379090 | Msa1179610 | 0.822282 | 2.575284e-53 | -8.615850e-47 |
| Msa0388000 | Msa1179610 | 0.826140 | 3.194278e-54 | -8.615850e-47 |
| Msa0390350 | Msa1179610 | 0.822931 | 1.818722e-53 | -8.615850e-47 |
| Msa0393140 | Msa1179610 | 0.800776 | 1.229753e-48 | -8.615850e-47 |
| Msa0394330 | Msa1179610 | 0.812393 | 4.335890e-51 | -8.615850e-47 |
| Msa0404880 | Msa1179610 | 0.809042 | 2.300796e-50 | -8.615850e-47 |
| Msa0413050 | Msa1179610 | 0.805145 | 1.537393e-49 | -8.615850e-47 |
| Msa0414990 | Msa1179610 | 0.805265 | 1.451239e-49 | -8.615850e-47 |
| Msa0415200 | Msa1179610 | 0.807016 | 6.210500e-50 | -8.615850e-47 |
| Msa0420100 | Msa1179610 | 0.809310 | 2.015302e-50 | -8.615850e-47 |
| Msa0425320 | Msa1179610 | 0.818965 | 1.488264e-52 | -8.615850e-47 |
| Msa0431310 | Msa1179610 | 0.814885 | 1.226483e-51 | -8.615850e-47 |
| Msa0439120 | Msa1179610 | 0.807041 | 6.135454e-50 | -8.615850e-47 |
| Msa0440090 | Msa1179610 | 0.809530 | 1.807662e-50 | -8.615850e-47 |
| Msa0453310 | Msa1179610 | 0.834641 | 2.665529e-56 | -8.615850e-47 |
| Msa0457600 | Msa1179610 | 0.810645 | 1.039661e-50 | -8.615850e-47 |
| Msa0460220 | Msa1179610 | 0.805376 | 1.375491e-49 | -8.615850e-47 |
| Msa0463140 | Msa1179610 | 0.816194 | 6.270591e-52 | -8.615850e-47 |
| Msa0469770 | Msa1179610 | 0.810720 | 1.001821e-50 | -8.615850e-47 |
| Msa0469840 | Msa1179610 | 0.831840 | 1.328500e-55 | -8.615850e-47 |
| Msa0471130 | Msa1179610 | 0.806416 | 8.316000e-50 | -8.615850e-47 |
| Msa0471480 | Msa1179610 | 0.800512 | 1.392216e-48 | -8.615850e-47 |
| Msa0471520 | Msa1179610 | 0.800112 | 1.679348e-48 | -8.615850e-47 |
| Msa0471760 | Msa1179610 | 0.827374 | 1.621073e-54 | -8.615850e-47 |
| Msa0476490 | Msa1179610 | 0.800656 | 1.300966e-48 | -8.615850e-47 |
| Msa0997290 | Msa1179610 | 0.800138 | 1.658669e-48 | -8.615850e-47 |
| Msa1022660 | Msa1179610 | 0.802966 | 4.364478e-49 | -8.615850e-47 |
| Msa1026880 | Msa1179610 | 0.806098 | 9.703085e-50 | -8.615850e-47 |
| Msa1035090 | Msa1179610 | 0.811701 | 6.137245e-51 | -8.615850e-47 |
| Msa1038420 | Msa1179610 | 0.803326 | 3.677812e-49 | -8.615850e-47 |
| Msa1040030 | Msa1179610 | 0.824000 | 1.022713e-53 | -8.615850e-47 |
| Msa1055490 | Msa1179610 | 0.813903 | 2.022524e-51 | -8.615850e-47 |
| Msa1056590 | Msa1179610 | 0.813813 | 2.116154e-51 | -8.615850e-47 |
| Msa1078600 | Msa1179610 | 0.813619 | 2.335198e-51 | -8.615850e-47 |
| Msa1078770 | Msa1179610 | 0.814403 | 1.568249e-51 | -8.615850e-47 |
| Msa1091450 | Msa1179610 | 0.810118 | 1.351115e-50 | -8.615850e-47 |
| Msa1106830 | Msa1179610 | 0.819138 | 1.359402e-52 | -8.615850e-47 |
| Msa0240290 | Msa1179610 | 0.800314 | 1.527661e-48 | -8.615850e-47 |
| Msa0274870 | Msa1179610 | 0.804320 | 2.285701e-49 | -8.615850e-47 |
| Msa0276060 | Msa1179610 | 0.804337 | 2.266972e-49 | -8.615850e-47 |
| Msa0278720 | Msa1179610 | 0.816656 | 4.942593e-52 | -8.615850e-47 |
| Msa0296100 | Msa1179610 | 0.818456 | 1.941652e-52 | -8.615850e-47 |
| Msa0307750 | Msa1179610 | 0.814187 | 1.750144e-51 | -8.615850e-47 |
| Msa0308300 | Msa1179610 | 0.800143 | 1.654955e-48 | -8.615850e-47 |
| Msa0317630 | Msa1179610 | 0.818405 | 1.994330e-52 | -8.615850e-47 |
| Msa0318320 | Msa1179610 | 0.800854 | 1.185576e-48 | -8.615850e-47 |
| Msa0327870 | Msa1179610 | 0.834813 | 2.411864e-56 | -8.615850e-47 |
| Msa0329050 | Msa1179610 | 0.802633 | 5.114665e-49 | -8.615850e-47 |
| Msa0352120 | Msa1179610 | 0.805558 | 1.259540e-49 | -8.615850e-47 |
| Msa1109500 | Msa1179610 | 0.802578 | 5.250124e-49 | -8.615850e-47 |
| Msa1117770 | Msa1179610 | 0.800623 | 1.321230e-48 | -8.615850e-47 |
| Msa1134830 | Msa1179610 | 0.812266 | 4.621875e-51 | -8.615850e-47 |
| Msa1135910 | Msa1179610 | 0.803654 | 3.145062e-49 | -8.615850e-47 |
| Msa1143820 | Msa1179610 | 0.801432 | 9.029196e-49 | -8.615850e-47 |
| Msa1143910 | Msa1179610 | 0.809451 | 1.879689e-50 | -8.615850e-47 |
| Msa1144470 | Msa1179610 | 0.815177 | 1.056413e-51 | -8.615850e-47 |
| Msa1150250 | Msa1179610 | 0.819865 | 9.277766e-53 | -8.615850e-47 |
| Msa1161550 | Msa1179610 | 0.815325 | 9.794877e-52 | -8.615850e-47 |
| Msa1162470 | Msa1179610 | 0.806582 | 7.668733e-50 | -8.615850e-47 |
| Msa1169600 | Msa1179610 | 0.802271 | 6.071980e-49 | -8.615850e-47 |
| Msa1177300 | Msa1179610 | 0.818175 | 2.248204e-52 | -8.615850e-47 |
| Msa1179610 | Msa1182950 | 0.802014 | 6.857747e-49 | -8.615850e-47 |
| Msa1179610 | Msa1182960 | 0.804324 | 2.281795e-49 | -8.615850e-47 |
| Msa1179610 | Msa1193680 | 0.843003 | 1.830187e-58 | -8.615850e-47 |
| Msa1179610 | Msa1203840 | 0.816440 | 5.523995e-52 | -8.615850e-47 |
| Msa1179610 | Msa1203860 | 0.816908 | 4.339828e-52 | -8.615850e-47 |
| Msa1179610 | Msa1206440 | 0.804085 | 2.557999e-49 | -8.615850e-47 |
| Msa1179610 | Msa1213550 | 0.833693 | 4.605096e-56 | -8.615850e-47 |
| Msa1179610 | Msa1223050 | 0.817033 | 4.067373e-52 | -8.615850e-47 |
| Msa1179610 | Msa1223520 | 0.801713 | 7.907566e-49 | -8.615850e-47 |
| Msa1179610 | Msa1224310 | 0.814584 | 1.429856e-51 | -8.615850e-47 |
| Msa1179610 | Msa1229880 | 0.824621 | 7.309633e-54 | -8.615850e-47 |
| Msa1179610 | Msa1239000 | 0.817732 | 2.830775e-52 | -8.615850e-47 |
| Msa1179610 | Msa1250490 | 0.800851 | 1.186981e-48 | -8.615850e-47 |
| Msa1179610 | Msa1263600 | 0.810326 | 1.218770e-50 | -8.615850e-47 |
| Msa1179610 | Msa1265990 | 0.806208 | 9.195354e-50 | -8.615850e-47 |
| Msa1179610 | Msa1296270 | 0.803932 | 2.753340e-49 | -8.615850e-47 |
| Msa1179610 | Msa1303040 | 0.816694 | 4.845308e-52 | -8.615850e-47 |
| Msa1179610 | Msa1310620 | 0.820790 | 5.693282e-53 | -8.615850e-47 |
| Msa1179610 | Msa1315990 | 0.806695 | 7.260274e-50 | -8.615850e-47 |
| Msa1179610 | Msa1317090 | 0.821994 | 3.003193e-53 | -8.615850e-47 |
| Msa1179610 | Msa1317340 | 0.817350 | 3.451261e-52 | -8.615850e-47 |
| Msa1179610 | Msa1330910 | 0.806178 | 9.331163e-50 | -8.615850e-47 |
| Msa1179610 | Msa1331400 | 0.830939 | 2.213764e-55 | -8.615850e-47 |
| Msa1179610 | Msa1331490 | 0.871429 | 6.880421e-67 | -8.615850e-47 |
| Msa1179610 | Msa1346890 | 0.825902 | 3.637557e-54 | -8.615850e-47 |
| Msa1179610 | Msa1348340 | 0.800180 | 1.626685e-48 | -8.615850e-47 |
| Msa1179610 | Msa1350350 | 0.813287 | 2.762109e-51 | -8.615850e-47 |
| Msa1179610 | Msa1356730 | 0.818737 | 1.676470e-52 | -8.615850e-47 |
| Msa1179610 | Msa1364420 | 0.811360 | 7.280811e-51 | -8.615850e-47 |
| Msa1179610 | Msa1368800 | 0.815956 | 7.087752e-52 | -8.615850e-47 |
| Msa1179610 | Msa1371690 | 0.811554 | 6.606513e-51 | -8.615850e-47 |
| Msa1179610 | Msa1372570 | 0.801740 | 7.805595e-49 | -8.615850e-47 |
| Msa1179610 | Msa1374610 | 0.814696 | 1.351123e-51 | -8.615850e-47 |
| Msa1179610 | Msa1376230 | 0.801492 | 8.779494e-49 | -8.615850e-47 |
| Msa1179610 | Msa1378840 | 0.818038 | 2.414492e-52 | -8.615850e-47 |
| Msa1179610 | Msa1379270 | 0.806164 | 9.397377e-50 | -8.615850e-47 |
| Msa1179610 | Msa1384620 | 0.823339 | 1.460603e-53 | -8.615850e-47 |
| Msa1179610 | Msa1404690 | 0.823993 | 1.026696e-53 | -8.615850e-47 |
| Msa1179610 | Msa1414280 | 0.802315 | 5.946880e-49 | -8.615850e-47 |
| Msa1179610 | Msa1418010 | 0.807950 | 3.935557e-50 | -8.615850e-47 |
| Msa1179610 | Msa1427020 | 0.812939 | 3.293440e-51 | -8.615850e-47 |
| Msa1179610 | Msa1427260 | 0.801238 | 9.894117e-49 | -8.615850e-47 |
| Msa1179610 | Msa1430940 | 0.816842 | 4.489282e-52 | -8.615850e-47 |
| Msa1179610 | Msa1435990 | 0.829377 | 5.327143e-55 | -8.615850e-47 |
| Msa1179610 | Msa1444750 | 0.805732 | 1.158393e-49 | -8.615850e-47 |
| Msa1179610 | Msa1451780 | 0.800671 | 1.291626e-48 | -8.615850e-47 |
| Msa1179610 | Msa1452080 | 0.803808 | 2.920867e-49 | -8.615850e-47 |
| Msa1179610 | Msa1453180 | 0.800475 | 1.416716e-48 | -8.615850e-47 |
| Msa1179610 | Msa1465380 | 0.815224 | 1.031730e-51 | -8.615850e-47 |
| Msa1179610 | Msa1465950 | 0.840285 | 9.534811e-58 | -8.615850e-47 |
| Msa0497140 | Msa1179610 | 0.801915 | 7.188760e-49 | -8.615850e-47 |
| Msa0508770 | Msa1179610 | 0.806555 | 7.772264e-50 | -8.615850e-47 |
| Msa0510030 | Msa1179610 | 0.817245 | 3.644142e-52 | -8.615850e-47 |
| Msa0511930 | Msa1179610 | 0.803721 | 3.046013e-49 | -8.615850e-47 |
| Msa0512930 | Msa1179610 | 0.808623 | 2.827517e-50 | -8.615850e-47 |
| Msa0515420 | Msa1179610 | 0.832185 | 1.091955e-55 | -8.615850e-47 |
| Msa0515460 | Msa1179610 | 0.823212 | 1.564050e-53 | -8.615850e-47 |
| Msa0516330 | Msa1179610 | 0.809014 | 2.332402e-50 | -8.615850e-47 |
| Msa0520480 | Msa1179610 | 0.803719 | 3.048826e-49 | -8.615850e-47 |
| Msa0533140 | Msa1179610 | 0.816187 | 6.292922e-52 | -8.615850e-47 |
| Msa0538100 | Msa1179610 | 0.803447 | 3.471605e-49 | -8.615850e-47 |
| Msa0546020 | Msa1179610 | 0.816587 | 5.121414e-52 | -8.615850e-47 |
| Msa0548230 | Msa1179610 | 0.831060 | 2.067189e-55 | -8.615850e-47 |
| Msa0562040 | Msa1179610 | 0.805973 | 1.030547e-49 | -8.615850e-47 |
| Msa0565930 | Msa1179610 | 0.832107 | 1.141791e-55 | -8.615850e-47 |
| Msa0568810 | Msa1179610 | 0.802832 | 4.651578e-49 | -8.615850e-47 |
| Msa0569630 | Msa1179610 | 0.834797 | 2.435048e-56 | -8.615850e-47 |
| Msa0583810 | Msa1179610 | 0.807158 | 5.793689e-50 | -8.615850e-47 |
| Msa0584250 | Msa1179610 | 0.812497 | 4.116354e-51 | -8.615850e-47 |
| Msa0585770 | Msa1179610 | 0.804017 | 2.642712e-49 | -8.615850e-47 |
| Msa0587060 | Msa1179610 | 0.820705 | 5.956319e-53 | -8.615850e-47 |
| Msa0588600 | Msa1179610 | 0.808208 | 3.467541e-50 | -8.615850e-47 |
| Msa0598680 | Msa1179610 | 0.813648 | 2.301900e-51 | -8.615850e-47 |
| Msa0864730 | Msa1179610 | 0.820825 | 5.590638e-53 | -8.615850e-47 |
| Msa0864750 | Msa1179610 | 0.821838 | 3.264066e-53 | -8.615850e-47 |
| Msa0865500 | Msa1179610 | 0.805597 | 1.236016e-49 | -8.615850e-47 |
| Msa0876150 | Msa1179610 | 0.827106 | 1.879340e-54 | -8.615850e-47 |
| Msa0880200 | Msa1179610 | 0.808967 | 2.387796e-50 | -8.615850e-47 |
| Msa0937350 | Msa1179610 | 0.827127 | 1.857537e-54 | -8.615850e-47 |
| Msa0938370 | Msa1179610 | 0.803168 | 3.964816e-49 | -8.615850e-47 |
| Msa0968960 | Msa1179610 | 0.810388 | 1.181588e-50 | -8.615850e-47 |
| Msa0974660 | Msa1179610 | 0.828153 | 1.053375e-54 | -8.615850e-47 |
| Msa0978440 | Msa1179610 | 0.805524 | 1.280812e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179610 | MtrunA17_Chr4g0062741 | 97.705 | 305 | 5 | 1 | 1 | 305 | 1 | 303 | 0.0 | 612 |
| Msa1179610 | MtrunA17_Chr1g0162081 | 51.466 | 307 | 104 | 8 | 8 | 298 | 12 | 289 | 4.68e-89 | 268 |
| Msa1179610 | MtrunA17_Chr5g0429521 | 48.058 | 206 | 68 | 5 | 8 | 208 | 29 | 200 | 1.32e-54 | 179 |
| Msa1179610 | MtrunA17_Chr3g0104071 | 47.867 | 211 | 72 | 5 | 8 | 213 | 43 | 220 | 4.95e-54 | 179 |
| Msa1179610 | MtrunA17_Chr7g0241761 | 36.774 | 310 | 144 | 9 | 3 | 294 | 30 | 305 | 1.00e-53 | 177 |
| Msa1179610 | MtrunA17_Chr1g0210471 | 46.040 | 202 | 77 | 3 | 8 | 209 | 24 | 193 | 1.15e-53 | 175 |
| Msa1179610 | MtrunA17_Chr5g0436501 | 41.509 | 212 | 82 | 5 | 8 | 214 | 27 | 201 | 1.34e-47 | 160 |
| Msa1179610 | MtrunA17_Chr8g0365011 | 34.347 | 329 | 134 | 12 | 1 | 298 | 1 | 278 | 2.20e-44 | 152 |
| Msa1179610 | MtrunA17_Chr4g0055931 | 57.391 | 115 | 46 | 2 | 101 | 213 | 55 | 168 | 4.14e-35 | 129 |
| Msa1179610 | MtrunA17_Chr6g0488471 | 73.239 | 71 | 19 | 0 | 134 | 204 | 91 | 161 | 8.55e-34 | 125 |
| Msa1179610 | MtrunA17_Chr8g0389241 | 73.239 | 71 | 18 | 1 | 134 | 204 | 99 | 168 | 3.20e-33 | 123 |
| Msa1179610 | MtrunA17_Chr2g0331031 | 61.053 | 95 | 31 | 1 | 110 | 204 | 85 | 173 | 9.70e-33 | 124 |
| Msa1179610 | MtrunA17_Chr8g0364731 | 50.000 | 146 | 50 | 7 | 149 | 280 | 10 | 146 | 9.05e-30 | 111 |
| Msa1179610 | MtrunA17_Chr5g0415191 | 59.184 | 98 | 30 | 1 | 109 | 206 | 81 | 168 | 4.00e-28 | 110 |
| Msa1179610 | MtrunA17_Chr3g0092621 | 51.456 | 103 | 39 | 1 | 115 | 206 | 48 | 150 | 1.38e-26 | 102 |
| Msa1179610 | MtrunA17_Chr4g0059701 | 68.354 | 79 | 25 | 0 | 128 | 206 | 72 | 150 | 1.68e-25 | 102 |
| Msa1179610 | MtrunA17_Chr8g0364741 | 38.255 | 149 | 50 | 4 | 4 | 149 | 6 | 115 | 1.26e-23 | 93.6 |
| Msa1179610 | MtrunA17_Chr5g0409841 | 50.617 | 81 | 38 | 1 | 136 | 214 | 88 | 168 | 8.36e-23 | 94.4 |
| Msa1179610 | MtrunA17_Chr5g0440731 | 54.430 | 79 | 32 | 2 | 136 | 211 | 101 | 178 | 1.06e-22 | 95.5 |
| Msa1179610 | MtrunA17_Chr3g0135671 | 56.410 | 78 | 31 | 2 | 130 | 204 | 81 | 158 | 1.50e-22 | 93.6 |
| Msa1179610 | MtrunA17_Chr5g0440741 | 56.410 | 78 | 29 | 3 | 137 | 211 | 98 | 173 | 6.30e-22 | 93.2 |
| Msa1179610 | MtrunA17_Chr6g0452791 | 57.746 | 71 | 20 | 1 | 140 | 210 | 80 | 140 | 6.91e-20 | 85.1 |
| Msa1179610 | MtrunA17_Chr5g0409831 | 48.780 | 82 | 39 | 1 | 136 | 214 | 73 | 154 | 4.46e-18 | 81.6 |
| Msa1179610 | MtrunA17_Chr5g0432921 | 32.512 | 203 | 92 | 10 | 8 | 207 | 21 | 181 | 8.75e-18 | 80.5 |
| Msa1179610 | MtrunA17_Chr1g0155181 | 48.000 | 75 | 35 | 2 | 1 | 75 | 1 | 71 | 1.83e-16 | 73.2 |
| Msa1179610 | MtrunA17_Chr5g0432941 | 32.512 | 203 | 91 | 10 | 8 | 207 | 22 | 181 | 2.15e-16 | 76.6 |
| Msa1179610 | MtrunA17_Chr3g0141601 | 48.000 | 75 | 36 | 2 | 3 | 77 | 2 | 73 | 5.02e-16 | 72.0 |
| Msa1179610 | MtrunA17_Chr1g0192061 | 48.611 | 72 | 33 | 2 | 142 | 210 | 63 | 133 | 5.34e-14 | 69.3 |
| Msa1179610 | MtrunA17_Chr6g0449111 | 44.595 | 74 | 38 | 1 | 2 | 75 | 4 | 74 | 6.62e-14 | 65.9 |
| Msa1179610 | MtrunA17_Chr3g0144631 | 40.000 | 70 | 39 | 1 | 4 | 73 | 12 | 78 | 1.80e-12 | 62.0 |
| Msa1179610 | MtrunA17_Chr8g0370121 | 47.170 | 53 | 28 | 0 | 137 | 189 | 97 | 149 | 8.41e-12 | 63.9 |
| Msa1179610 | MtrunA17_Chr3g0113121 | 45.946 | 74 | 33 | 2 | 142 | 208 | 97 | 170 | 7.61e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179610 | AT1G49010.1 | 54.006 | 337 | 99 | 11 | 1 | 304 | 1 | 314 | 1.18e-94 | 283 |
| Msa1179610 | AT5G08520.1 | 50.680 | 294 | 95 | 9 | 3 | 285 | 7 | 261 | 1.42e-80 | 246 |
| Msa1179610 | AT2G38090.1 | 45.366 | 205 | 90 | 3 | 5 | 208 | 26 | 209 | 5.91e-56 | 183 |
| Msa1179610 | AT5G58900.1 | 46.977 | 215 | 85 | 6 | 2 | 214 | 28 | 215 | 1.48e-53 | 177 |
| Msa1179610 | AT5G01200.1 | 44.660 | 206 | 92 | 4 | 6 | 208 | 28 | 214 | 1.45e-51 | 171 |
| Msa1179610 | AT5G23650.1 | 43.750 | 224 | 100 | 4 | 3 | 226 | 8 | 205 | 3.02e-50 | 169 |
| Msa1179610 | AT5G04760.1 | 41.629 | 221 | 90 | 4 | 8 | 228 | 6 | 187 | 2.17e-47 | 158 |
| Msa1179610 | AT5G05790.2 | 37.500 | 272 | 122 | 8 | 1 | 256 | 24 | 263 | 1.00e-46 | 159 |
| Msa1179610 | AT5G05790.1 | 37.500 | 272 | 122 | 8 | 1 | 256 | 24 | 263 | 1.00e-46 | 159 |
| Msa1179610 | AT3G11280.2 | 45.050 | 202 | 71 | 4 | 8 | 208 | 33 | 195 | 1.89e-46 | 157 |
| Msa1179610 | AT3G11280.1 | 45.050 | 202 | 71 | 4 | 8 | 208 | 33 | 195 | 1.89e-46 | 157 |
| Msa1179610 | AT5G47390.1 | 57.798 | 109 | 43 | 1 | 114 | 219 | 67 | 175 | 9.30e-35 | 129 |
| Msa1179610 | AT3G10580.2 | 38.009 | 221 | 86 | 8 | 1 | 221 | 1 | 170 | 3.32e-34 | 125 |
| Msa1179610 | AT3G10580.1 | 38.009 | 221 | 86 | 8 | 1 | 221 | 1 | 170 | 6.15e-34 | 125 |
| Msa1179610 | AT5G61620.1 | 38.265 | 196 | 89 | 7 | 114 | 300 | 84 | 256 | 1.25e-30 | 117 |
| Msa1179610 | AT4G09450.1 | 36.245 | 229 | 90 | 7 | 8 | 231 | 7 | 184 | 2.07e-29 | 111 |
| Msa1179610 | AT5G56840.1 | 56.818 | 88 | 37 | 1 | 123 | 209 | 74 | 161 | 5.93e-29 | 111 |
| Msa1179610 | AT1G70000.1 | 61.458 | 96 | 27 | 1 | 110 | 205 | 78 | 163 | 8.56e-28 | 108 |
| Msa1179610 | AT1G70000.2 | 61.458 | 96 | 27 | 1 | 110 | 205 | 78 | 163 | 8.56e-28 | 108 |
| Msa1179610 | AT1G74840.2 | 45.122 | 164 | 83 | 4 | 118 | 276 | 74 | 235 | 3.34e-26 | 103 |
| Msa1179610 | AT3G16350.1 | 65.385 | 78 | 20 | 1 | 110 | 187 | 114 | 184 | 3.68e-26 | 107 |
| Msa1179610 | AT1G74840.1 | 48.611 | 144 | 67 | 4 | 118 | 256 | 74 | 215 | 3.98e-26 | 104 |
| Msa1179610 | AT1G19000.2 | 55.556 | 108 | 45 | 2 | 130 | 237 | 92 | 196 | 1.25e-23 | 98.2 |
| Msa1179610 | AT1G19000.1 | 55.556 | 108 | 45 | 2 | 130 | 237 | 92 | 196 | 1.25e-23 | 98.2 |
| Msa1179610 | AT3G10590.1 | 47.917 | 96 | 48 | 2 | 125 | 219 | 96 | 190 | 4.83e-18 | 81.3 |
| Msa1179610 | AT4G39250.1 | 42.424 | 66 | 35 | 1 | 8 | 73 | 14 | 76 | 5.34e-13 | 64.7 |
| Msa1179610 | AT1G75250.2 | 40.845 | 71 | 39 | 1 | 3 | 73 | 7 | 74 | 2.59e-12 | 62.4 |
| Msa1179610 | AT1G75250.1 | 40.845 | 71 | 39 | 1 | 3 | 73 | 7 | 74 | 1.30e-11 | 61.6 |
Find 117 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAATTCATTAGCATAATT+TGG | 0.179151 | 8_1:-13063540 | None:intergenic |
| GTTGGATTTCTTTGGAATTA+TGG | 0.193581 | 8_1:-13063296 | None:intergenic |
| AAGAGATCAAGTTGTAATTT+TGG | 0.196816 | 8_1:+13063615 | Msa1179610:CDS |
| CATCATCCTCCTGGTGGTTT+AGG | 0.251182 | 8_1:+13064346 | Msa1179610:CDS |
| TTACTCGGTTTAGACAAATT+TGG | 0.255781 | 8_1:+13064061 | Msa1179610:CDS |
| CTTGATGACATGTTGGTTAT+TGG | 0.264739 | 8_1:-13063318 | None:intergenic |
| GGTTATTGGTTGGATTTCTT+TGG | 0.275947 | 8_1:-13063304 | None:intergenic |
| CCTTATTAGGTGGTGGGTCT+TGG | 0.278133 | 8_1:+13064941 | Msa1179610:three_prime_UTR |
| CCAAGACCCACCACCTAATA+AGG | 0.287986 | 8_1:-13064941 | None:intergenic |
| TTCAAACAAAGATTCTTCTA+AGG | 0.298166 | 8_1:+13063575 | Msa1179610:CDS |
| AGTTTAGGAGAGTTGGATTT+CGG | 0.308464 | 8_1:+13064566 | Msa1179610:three_prime_UTR |
| ATTTAGTAGATTTCCTTATT+AGG | 0.311305 | 8_1:+13064928 | Msa1179610:three_prime_UTR |
| CCTTCAAATACAATGGGTTT+AGG | 0.313838 | 8_1:+13064295 | Msa1179610:CDS |
| ACAAATTTGGAAAAGGAGAT+TGG | 0.314475 | 8_1:+13064074 | Msa1179610:CDS |
| TTGGATTTCGGAGGCTCATC+AGG | 0.316961 | 8_1:+13064578 | Msa1179610:three_prime_UTR |
| GAGAAGTTCATTACTTTCCT+TGG | 0.317335 | 8_1:-13064997 | None:intergenic |
| AAAATAAAGTTTAGGAGAGT+TGG | 0.346478 | 8_1:+13064559 | Msa1179610:three_prime_UTR |
| ACGCACAAAAGTATTTCATT+AGG | 0.364378 | 8_1:+13064152 | Msa1179610:CDS |
| ATATGTCCCCAACAAAAGTA+TGG | 0.368701 | 8_1:+13063446 | Msa1179610:CDS |
| TGTTGCTCCTCCTGCTCATA+TGG | 0.385813 | 8_1:+13064399 | Msa1179610:CDS |
| TTACCATGTTGACCTGTTAT+CGG | 0.390780 | 8_1:-13064265 | None:intergenic |
| AATCATCAAGCACCGATAAC+AGG | 0.397688 | 8_1:+13064253 | Msa1179610:CDS |
| CCTAAACCCATTGTATTTGA+AGG | 0.400664 | 8_1:-13064295 | None:intergenic |
| TAGATTTCCTTATTAGGTGG+TGG | 0.405451 | 8_1:+13064934 | Msa1179610:three_prime_UTR |
| AATTATGGTTCAAAGTTTAG+AGG | 0.405891 | 8_1:-13063281 | None:intergenic |
| ATCCACCTTTACCACTACTA+TGG | 0.406819 | 8_1:-13063680 | None:intergenic |
| GAATTTGAGGAATTCAATAA+TGG | 0.408130 | 8_1:+13064872 | Msa1179610:three_prime_UTR |
| GGATGATGGGGAAGCATAAC+AGG | 0.408632 | 8_1:-13064439 | None:intergenic |
| TCAGGGTCGGGGAAAGTCTC+AGG | 0.409322 | 8_1:+13064596 | Msa1179610:three_prime_UTR |
| TTCGGAGGCTCATCAGGGTC+GGG | 0.413449 | 8_1:+13064584 | Msa1179610:three_prime_UTR |
| TATAGAGGGTGCGCAGGATA+AGG | 0.429870 | 8_1:-13063168 | None:intergenic |
| TTCTTCTTCATAGCTCCAAA+TGG | 0.430907 | 8_1:-13063346 | None:intergenic |
| CCTGGTGGTTTAGGAATGTA+TGG | 0.438589 | 8_1:+13064355 | Msa1179610:CDS |
| TGTCATCAAGTGGAGCCATT+TGG | 0.441940 | 8_1:+13063331 | Msa1179610:CDS |
| AGATGTCATTGGTGCATTGT+TGG | 0.442436 | 8_1:-13064511 | None:intergenic |
| GCTCATATGGCATCTGCAGT+TGG | 0.444181 | 8_1:+13064412 | Msa1179610:CDS |
| CTTAACTTTCCACATAAAAG+AGG | 0.446989 | 8_1:-13064803 | None:intergenic |
| AATTTACTCAAAAGAATTTG+AGG | 0.456304 | 8_1:+13064859 | Msa1179610:three_prime_UTR |
| CTATGCTCTTCTTCTGTCCA+TGG | 0.458260 | 8_1:-13063750 | None:intergenic |
| AGAAGATTCAAAAGAGCAAT+GGG | 0.463592 | 8_1:+13063410 | Msa1179610:CDS |
| CTCATATGGCATCTGCAGTT+GGG | 0.466530 | 8_1:+13064413 | Msa1179610:CDS |
| CCAACATTGGTTGGTTCAGT+TGG | 0.475875 | 8_1:-13064724 | None:intergenic |
| ACAATCCCTTCAAATACAAT+GGG | 0.480739 | 8_1:+13064289 | Msa1179610:CDS |
| CACAATCCCTTCAAATACAA+TGG | 0.482952 | 8_1:+13064288 | Msa1179610:CDS |
| TTTCGGAGGCTCATCAGGGT+CGG | 0.483482 | 8_1:+13064583 | Msa1179610:three_prime_UTR |
| AGATTTCCTTATTAGGTGGT+GGG | 0.487579 | 8_1:+13064935 | Msa1179610:three_prime_UTR |
| TCAGAACAAGAAAGGAGAAA+AGG | 0.493051 | 8_1:+13063723 | Msa1179610:CDS |
| GCAACAACAGGATGTCCAAC+TGG | 0.493168 | 8_1:-13064382 | None:intergenic |
| TGTTAACACTAGTAATATCA+TGG | 0.493710 | 8_1:-13064213 | None:intergenic |
| GGTTTAGACAAATTTGGAAA+AGG | 0.494395 | 8_1:+13064067 | Msa1179610:CDS |
| TGAGCAGGAGGAGCAACAAC+AGG | 0.495632 | 8_1:-13064394 | None:intergenic |
| ATGGTTCAAAGTTTAGAGGA+TGG | 0.496215 | 8_1:-13063277 | None:intergenic |
| ATGGTGAAATTAATTGAAGA+TGG | 0.496373 | 8_1:-13063252 | None:intergenic |
| TATGATTATATTAAATTCCA+AGG | 0.498304 | 8_1:+13064980 | Msa1179610:three_prime_UTR |
| TGGTTCAAAGTTTAGAGGAT+GGG | 0.499033 | 8_1:-13063276 | None:intergenic |
| CTAAACCCATTGTATTTGAA+GGG | 0.499951 | 8_1:-13064294 | None:intergenic |
| GTGGATGATGATGAGGATGA+TGG | 0.500151 | 8_1:-13064453 | None:intergenic |
| TACATGACATGGTAGTATAG+AGG | 0.500647 | 8_1:-13063183 | None:intergenic |
| GTTCAGCCTCATCATCCTCC+TGG | 0.503699 | 8_1:+13064337 | Msa1179610:CDS |
| TGGATGATGATGAGGATGAT+GGG | 0.504027 | 8_1:-13064452 | None:intergenic |
| TGTACCTCTTGCTTACCCTA+TGG | 0.504295 | 8_1:+13064483 | Msa1179610:CDS |
| TAAGCAAGAGGTACAACATA+AGG | 0.508613 | 8_1:-13064475 | None:intergenic |
| TGCATTGTTGGAGGTGCCAT+AGG | 0.508759 | 8_1:-13064499 | None:intergenic |
| AAAGAAAGAGGAGATGTCAT+TGG | 0.509235 | 8_1:-13064522 | None:intergenic |
| ATGACATGTTGGTTATTGGT+TGG | 0.509790 | 8_1:-13063314 | None:intergenic |
| CATCGTCATCAGAACAAGAA+AGG | 0.515208 | 8_1:+13063715 | Msa1179610:CDS |
| AGAATGCTATAGCCATGCAT+TGG | 0.517213 | 8_1:+13063379 | Msa1179610:CDS |
| TAACAACAAATAAAAGAAAG+AGG | 0.520903 | 8_1:-13064754 | None:intergenic |
| TGTCATTGGTGCATTGTTGG+AGG | 0.521814 | 8_1:-13064508 | None:intergenic |
| GCGTGACTTGCTACTTGTGT+TGG | 0.526225 | 8_1:-13064133 | None:intergenic |
| AAGAAGATTCAAAAGAGCAA+TGG | 0.529523 | 8_1:+13063409 | Msa1179610:CDS |
| CCAACTGAACCAACCAATGT+TGG | 0.532207 | 8_1:+13064724 | Msa1179610:three_prime_UTR |
| GGAGTTGAGCCAACATTGGT+TGG | 0.541325 | 8_1:-13064733 | None:intergenic |
| GAAACAACATTACCAAGTAT+TGG | 0.544479 | 8_1:+13063476 | Msa1179610:CDS |
| TAACATCATCTACCAATACT+TGG | 0.547881 | 8_1:-13063488 | None:intergenic |
| GAGATTGGAGGAGCATATCA+AGG | 0.549491 | 8_1:+13064089 | Msa1179610:CDS |
| TCGGAGGCTCATCAGGGTCG+GGG | 0.550876 | 8_1:+13064585 | Msa1179610:three_prime_UTR |
| AAAGGAGAAAAGGAATTCCA+TGG | 0.553013 | 8_1:+13063733 | Msa1179610:CDS |
| ACTGCAGATGCCATATGAGC+AGG | 0.554621 | 8_1:-13064409 | None:intergenic |
| GGAATGTATGGAGCACCAGT+TGG | 0.557234 | 8_1:+13064367 | Msa1179610:CDS |
| CAGGATAAGGAGAAGAATCA+TGG | 0.563458 | 8_1:-13063155 | None:intergenic |
| ACACACCATAGTAGTGGTAA+AGG | 0.568656 | 8_1:+13063675 | Msa1179610:CDS |
| TGATCTCTTATCTGAACTTG+TGG | 0.570341 | 8_1:-13063601 | None:intergenic |
| CAATGAATAGAGATAGAAGA+AGG | 0.573297 | 8_1:+13064182 | Msa1179610:CDS |
| AGATGATGTTAGTGCAATTG+AGG | 0.574849 | 8_1:+13063500 | Msa1179610:CDS |
| TGGTGAAATTAATTGAAGAT+GGG | 0.575541 | 8_1:-13063251 | None:intergenic |
| AAGAGGAGTTGAGCCAACAT+TGG | 0.577251 | 8_1:-13064737 | None:intergenic |
| CAAAGTTTAGAGGATGGGAA+TGG | 0.579935 | 8_1:-13063271 | None:intergenic |
| TAGTAGATTTCCTTATTAGG+TGG | 0.580399 | 8_1:+13064931 | Msa1179610:three_prime_UTR |
| GTGTATGATAAGAAGTAAAG+TGG | 0.581080 | 8_1:-13063129 | None:intergenic |
| TGGTAGTATAGAGGGTGCGC+AGG | 0.586308 | 8_1:-13063174 | None:intergenic |
| CAGCCTCATCATCCTCCTGG+TGG | 0.590947 | 8_1:+13064340 | Msa1179610:CDS |
| ACATGACATGGTAGTATAGA+GGG | 0.592564 | 8_1:-13063182 | None:intergenic |
| CACCATAGTAGTGGTAAAGG+TGG | 0.593230 | 8_1:+13063678 | Msa1179610:CDS |
| GGATGATGATGAGGATGATG+GGG | 0.600297 | 8_1:-13064451 | None:intergenic |
| GCAAGAGGTACAACATAAGG+TGG | 0.601447 | 8_1:-13064472 | None:intergenic |
| GATGTTAGTGCAATTGAGGA+AGG | 0.604039 | 8_1:+13063504 | Msa1179610:CDS |
| ATAACCAACATGTCATCAAG+TGG | 0.608531 | 8_1:+13063321 | Msa1179610:exon |
| GGCTCCACTTGATGACATGT+TGG | 0.610239 | 8_1:-13063325 | None:intergenic |
| TTAGGAGAGTTGGATTTCGG+AGG | 0.610748 | 8_1:+13064569 | Msa1179610:three_prime_UTR |
| CAGGCTCAGTGTAGTGACAG+AGG | 0.614873 | 8_1:+13064615 | Msa1179610:three_prime_UTR |
| CCATACATTCCTAAACCACC+AGG | 0.623664 | 8_1:-13064355 | None:intergenic |
| AATTTGGAAAAGGAGATTGG+AGG | 0.625943 | 8_1:+13064077 | Msa1179610:CDS |
| AAACCACCAGGAGGATGATG+AGG | 0.627717 | 8_1:-13064343 | None:intergenic |
| TGGATTTCGGAGGCTCATCA+GGG | 0.631848 | 8_1:+13064579 | Msa1179610:three_prime_UTR |
| GTGGTAAAGGTGGATTGTCA+AGG | 0.632578 | 8_1:+13063688 | Msa1179610:CDS |
| GCATTGTTGGAGGTGCCATA+GGG | 0.632899 | 8_1:-13064498 | None:intergenic |
| TTTACCACTACTATGGTGTG+TGG | 0.634746 | 8_1:-13063673 | None:intergenic |
| CATGGACAGAAGAAGAGCAT+AGG | 0.635255 | 8_1:+13063751 | Msa1179610:CDS |
| GATATTACTAGTGTTAACAA+TGG | 0.637555 | 8_1:+13064217 | Msa1179610:CDS |
| GCACCGATAACAGGTCAACA+TGG | 0.644220 | 8_1:+13064262 | Msa1179610:CDS |
| GCAGATGCCATATGAGCAGG+AGG | 0.646062 | 8_1:-13064406 | None:intergenic |
| GACTCCACACACCATAGTAG+TGG | 0.647100 | 8_1:+13063669 | Msa1179610:CDS |
| ACATAAGGTGGATGATGATG+AGG | 0.659765 | 8_1:-13064460 | None:intergenic |
| GAATTTGTCTCTACATGACA+TGG | 0.702800 | 8_1:-13063194 | None:intergenic |
| GGTGCCATAGGGTAAGCAAG+AGG | 0.704654 | 8_1:-13064487 | None:intergenic |
| TACATTCCTAAACCACCAGG+AGG | 0.734599 | 8_1:-13064352 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTGTTTCTTTTATTC+AGG | + | chr8_1:13064032-13064051 | Msa1179610:intron | 15.0% |
| !!! | TTTTGTCAAAAATAAAGTTT+AGG | + | chr8_1:13064551-13064570 | Msa1179610:three_prime_UTR | 15.0% |
| !! | TATGATTATATTAAATTCCA+AGG | + | chr8_1:13064980-13064999 | Msa1179610:three_prime_UTR | 15.0% |
| !!! | TTAATTTGTTTCTTTTATTC+AGG | + | chr8_1:13064032-13064051 | Msa1179610:intron | 15.0% |
| !!! | TTTTGTCAAAAATAAAGTTT+AGG | + | chr8_1:13064551-13064570 | Msa1179610:three_prime_UTR | 15.0% |
| !! | TATGATTATATTAAATTCCA+AGG | + | chr8_1:13064980-13064999 | Msa1179610:three_prime_UTR | 15.0% |
| !! | TCTAATTCATTAGCATAATT+TGG | - | chr8_1:13063543-13063562 | None:intergenic | 20.0% |
| !! | TTGTTGAACAATTATATGAA+GGG | - | chr8_1:13063812-13063831 | None:intergenic | 20.0% |
| !! | ATTGTTGAACAATTATATGA+AGG | - | chr8_1:13063813-13063832 | None:intergenic | 20.0% |
| !! | TTCAAGGTAATTAATTAACA+TGG | + | chr8_1:13063989-13064008 | Msa1179610:intron | 20.0% |
| !!! | TTATTCAGGTTATTTTTACT+CGG | + | chr8_1:13064046-13064065 | Msa1179610:intron | 20.0% |
| !! | ACAAAAAGAAAAAAAGAAAG+AGG | - | chr8_1:13064537-13064556 | None:intergenic | 20.0% |
| !! | TAACAACAAATAAAAGAAAG+AGG | - | chr8_1:13064757-13064776 | None:intergenic | 20.0% |
| !!! | ATTTGTTGTTAGTTTTAATG+AGG | + | chr8_1:13064766-13064785 | Msa1179610:three_prime_UTR | 20.0% |
| !! | AATTTACTCAAAAGAATTTG+AGG | + | chr8_1:13064859-13064878 | Msa1179610:three_prime_UTR | 20.0% |
| !! | ATTTAGTAGATTTCCTTATT+AGG | + | chr8_1:13064928-13064947 | Msa1179610:three_prime_UTR | 20.0% |
| !! | TCTAATTCATTAGCATAATT+TGG | - | chr8_1:13063543-13063562 | None:intergenic | 20.0% |
| !! | TTGTTGAACAATTATATGAA+GGG | - | chr8_1:13063812-13063831 | None:intergenic | 20.0% |
| !! | ATTGTTGAACAATTATATGA+AGG | - | chr8_1:13063813-13063832 | None:intergenic | 20.0% |
| !! | TTCAAGGTAATTAATTAACA+TGG | + | chr8_1:13063989-13064008 | Msa1179610:intron | 20.0% |
| !!! | TTATTCAGGTTATTTTTACT+CGG | + | chr8_1:13064046-13064065 | Msa1179610:intron | 20.0% |
| !! | ACAAAAAGAAAAAAAGAAAG+AGG | - | chr8_1:13064537-13064556 | None:intergenic | 20.0% |
| !! | TAACAACAAATAAAAGAAAG+AGG | - | chr8_1:13064757-13064776 | None:intergenic | 20.0% |
| !!! | ATTTGTTGTTAGTTTTAATG+AGG | + | chr8_1:13064766-13064785 | Msa1179610:three_prime_UTR | 20.0% |
| !! | AATTTACTCAAAAGAATTTG+AGG | + | chr8_1:13064859-13064878 | Msa1179610:three_prime_UTR | 20.0% |
| !! | ATTTAGTAGATTTCCTTATT+AGG | + | chr8_1:13064928-13064947 | Msa1179610:three_prime_UTR | 20.0% |
| ! | TGGTGAAATTAATTGAAGAT+GGG | - | chr8_1:13063254-13063273 | None:intergenic | 25.0% |
| ! | ATGGTGAAATTAATTGAAGA+TGG | - | chr8_1:13063255-13063274 | None:intergenic | 25.0% |
| ! | AATTATGGTTCAAAGTTTAG+AGG | - | chr8_1:13063284-13063303 | None:intergenic | 25.0% |
| ! | TTCAAACAAAGATTCTTCTA+AGG | + | chr8_1:13063575-13063594 | Msa1179610:CDS | 25.0% |
| !!! | AAGAGATCAAGTTGTAATTT+TGG | + | chr8_1:13063615-13063634 | Msa1179610:CDS | 25.0% |
| ! | ATGAAATATATTTGTGCACA+CGG | - | chr8_1:13063939-13063958 | None:intergenic | 25.0% |
| ! | TGTTAACACTAGTAATATCA+TGG | - | chr8_1:13064216-13064235 | None:intergenic | 25.0% |
| ! | GATATTACTAGTGTTAACAA+TGG | + | chr8_1:13064217-13064236 | Msa1179610:CDS | 25.0% |
| ! | AAAATAAAGTTTAGGAGAGT+TGG | + | chr8_1:13064559-13064578 | Msa1179610:three_prime_UTR | 25.0% |
| !! | AAGAAAAATCCTCTTTTATG+TGG | + | chr8_1:13064794-13064813 | Msa1179610:three_prime_UTR | 25.0% |
| ! | GAATTTGAGGAATTCAATAA+TGG | + | chr8_1:13064872-13064891 | Msa1179610:three_prime_UTR | 25.0% |
| ! | TGGTGAAATTAATTGAAGAT+GGG | - | chr8_1:13063254-13063273 | None:intergenic | 25.0% |
| ! | ATGGTGAAATTAATTGAAGA+TGG | - | chr8_1:13063255-13063274 | None:intergenic | 25.0% |
| ! | AATTATGGTTCAAAGTTTAG+AGG | - | chr8_1:13063284-13063303 | None:intergenic | 25.0% |
| ! | TTCAAACAAAGATTCTTCTA+AGG | + | chr8_1:13063575-13063594 | Msa1179610:CDS | 25.0% |
| !!! | AAGAGATCAAGTTGTAATTT+TGG | + | chr8_1:13063615-13063634 | Msa1179610:CDS | 25.0% |
| ! | ATGAAATATATTTGTGCACA+CGG | - | chr8_1:13063939-13063958 | None:intergenic | 25.0% |
| ! | TGTTAACACTAGTAATATCA+TGG | - | chr8_1:13064216-13064235 | None:intergenic | 25.0% |
| ! | GATATTACTAGTGTTAACAA+TGG | + | chr8_1:13064217-13064236 | Msa1179610:CDS | 25.0% |
| ! | AAAATAAAGTTTAGGAGAGT+TGG | + | chr8_1:13064559-13064578 | Msa1179610:three_prime_UTR | 25.0% |
| !! | AAGAAAAATCCTCTTTTATG+TGG | + | chr8_1:13064794-13064813 | Msa1179610:three_prime_UTR | 25.0% |
| ! | GAATTTGAGGAATTCAATAA+TGG | + | chr8_1:13064872-13064891 | Msa1179610:three_prime_UTR | 25.0% |
| !! | GTTGGATTTCTTTGGAATTA+TGG | - | chr8_1:13063299-13063318 | None:intergenic | 30.0% |
| !!! | TTCTTTTTCAATCCAATGCA+TGG | - | chr8_1:13063394-13063413 | None:intergenic | 30.0% |
| AAGAAGATTCAAAAGAGCAA+TGG | + | chr8_1:13063409-13063428 | Msa1179610:CDS | 30.0% | |
| AGAAGATTCAAAAGAGCAAT+GGG | + | chr8_1:13063410-13063429 | Msa1179610:CDS | 30.0% | |
| ! | ACATGTTCCATACTTTTGTT+GGG | - | chr8_1:13063456-13063475 | None:intergenic | 30.0% |
| GAAACAACATTACCAAGTAT+TGG | + | chr8_1:13063476-13063495 | Msa1179610:CDS | 30.0% | |
| TAACATCATCTACCAATACT+TGG | - | chr8_1:13063491-13063510 | None:intergenic | 30.0% | |
| !! | TCAAGTTGTAATTTTGGAAG+TGG | + | chr8_1:13063621-13063640 | Msa1179610:CDS | 30.0% |
| !! | CAAGTTGTAATTTTGGAAGT+GGG | + | chr8_1:13063622-13063641 | Msa1179610:CDS | 30.0% |
| TCATTAGCTAGATTTCAACA+AGG | + | chr8_1:13063955-13063974 | Msa1179610:intron | 30.0% | |
| CAAGGATTCATTTCAATTCA+AGG | + | chr8_1:13063973-13063992 | Msa1179610:intron | 30.0% | |
| TTACTCGGTTTAGACAAATT+TGG | + | chr8_1:13064061-13064080 | Msa1179610:CDS | 30.0% | |
| GGTTTAGACAAATTTGGAAA+AGG | + | chr8_1:13064067-13064086 | Msa1179610:CDS | 30.0% | |
| ACAAATTTGGAAAAGGAGAT+TGG | + | chr8_1:13064074-13064093 | Msa1179610:CDS | 30.0% | |
| ! | CAAGGAATTTTGTGATATCT+AGG | + | chr8_1:13064107-13064126 | Msa1179610:CDS | 30.0% |
| !! | ACGCACAAAAGTATTTCATT+AGG | + | chr8_1:13064152-13064171 | Msa1179610:CDS | 30.0% |
| CAATGAATAGAGATAGAAGA+AGG | + | chr8_1:13064182-13064201 | Msa1179610:CDS | 30.0% | |
| ACAATCCCTTCAAATACAAT+GGG | + | chr8_1:13064289-13064308 | Msa1179610:CDS | 30.0% | |
| CTAAACCCATTGTATTTGAA+GGG | - | chr8_1:13064297-13064316 | None:intergenic | 30.0% | |
| AATTCAAAGTCAGATTCTTG+TGG | + | chr8_1:13064682-13064701 | Msa1179610:intron | 30.0% | |
| CTTAACTTTCCACATAAAAG+AGG | - | chr8_1:13064806-13064825 | None:intergenic | 30.0% | |
| TAGTAGATTTCCTTATTAGG+TGG | + | chr8_1:13064931-13064950 | Msa1179610:three_prime_UTR | 30.0% | |
| GTGTATGATAAGAAGTAAAG+TGG | - | chr8_1:13063132-13063151 | None:intergenic | 30.0% | |
| !! | GTTGGATTTCTTTGGAATTA+TGG | - | chr8_1:13063299-13063318 | None:intergenic | 30.0% |
| !!! | TTCTTTTTCAATCCAATGCA+TGG | - | chr8_1:13063394-13063413 | None:intergenic | 30.0% |
| AAGAAGATTCAAAAGAGCAA+TGG | + | chr8_1:13063409-13063428 | Msa1179610:CDS | 30.0% | |
| AGAAGATTCAAAAGAGCAAT+GGG | + | chr8_1:13063410-13063429 | Msa1179610:CDS | 30.0% | |
| ! | ACATGTTCCATACTTTTGTT+GGG | - | chr8_1:13063456-13063475 | None:intergenic | 30.0% |
| GAAACAACATTACCAAGTAT+TGG | + | chr8_1:13063476-13063495 | Msa1179610:CDS | 30.0% | |
| TAACATCATCTACCAATACT+TGG | - | chr8_1:13063491-13063510 | None:intergenic | 30.0% | |
| !! | TCAAGTTGTAATTTTGGAAG+TGG | + | chr8_1:13063621-13063640 | Msa1179610:CDS | 30.0% |
| !! | CAAGTTGTAATTTTGGAAGT+GGG | + | chr8_1:13063622-13063641 | Msa1179610:CDS | 30.0% |
| TCATTAGCTAGATTTCAACA+AGG | + | chr8_1:13063955-13063974 | Msa1179610:intron | 30.0% | |
| CAAGGATTCATTTCAATTCA+AGG | + | chr8_1:13063973-13063992 | Msa1179610:intron | 30.0% | |
| TTACTCGGTTTAGACAAATT+TGG | + | chr8_1:13064061-13064080 | Msa1179610:CDS | 30.0% | |
| GGTTTAGACAAATTTGGAAA+AGG | + | chr8_1:13064067-13064086 | Msa1179610:CDS | 30.0% | |
| ACAAATTTGGAAAAGGAGAT+TGG | + | chr8_1:13064074-13064093 | Msa1179610:CDS | 30.0% | |
| ! | CAAGGAATTTTGTGATATCT+AGG | + | chr8_1:13064107-13064126 | Msa1179610:CDS | 30.0% |
| !! | ACGCACAAAAGTATTTCATT+AGG | + | chr8_1:13064152-13064171 | Msa1179610:CDS | 30.0% |
| CAATGAATAGAGATAGAAGA+AGG | + | chr8_1:13064182-13064201 | Msa1179610:CDS | 30.0% | |
| ACAATCCCTTCAAATACAAT+GGG | + | chr8_1:13064289-13064308 | Msa1179610:CDS | 30.0% | |
| CTAAACCCATTGTATTTGAA+GGG | - | chr8_1:13064297-13064316 | None:intergenic | 30.0% | |
| AATTCAAAGTCAGATTCTTG+TGG | + | chr8_1:13064682-13064701 | Msa1179610:intron | 30.0% | |
| CTTAACTTTCCACATAAAAG+AGG | - | chr8_1:13064806-13064825 | None:intergenic | 30.0% | |
| TAGTAGATTTCCTTATTAGG+TGG | + | chr8_1:13064931-13064950 | Msa1179610:three_prime_UTR | 30.0% | |
| ACATGACATGGTAGTATAGA+GGG | - | chr8_1:13063185-13063204 | None:intergenic | 35.0% | |
| TACATGACATGGTAGTATAG+AGG | - | chr8_1:13063186-13063205 | None:intergenic | 35.0% | |
| GAATTTGTCTCTACATGACA+TGG | - | chr8_1:13063197-13063216 | None:intergenic | 35.0% | |
| !!! | GTAAGTCTTTTTTGTGAGTG+TGG | - | chr8_1:13063219-13063238 | None:intergenic | 35.0% |
| TGGTTCAAAGTTTAGAGGAT+GGG | - | chr8_1:13063279-13063298 | None:intergenic | 35.0% | |
| ATGGTTCAAAGTTTAGAGGA+TGG | - | chr8_1:13063280-13063299 | None:intergenic | 35.0% | |
| ! | GGTTATTGGTTGGATTTCTT+TGG | - | chr8_1:13063307-13063326 | None:intergenic | 35.0% |
| ! | ATGACATGTTGGTTATTGGT+TGG | - | chr8_1:13063317-13063336 | None:intergenic | 35.0% |
| ! | CTTGATGACATGTTGGTTAT+TGG | - | chr8_1:13063321-13063340 | None:intergenic | 35.0% |
| ATAACCAACATGTCATCAAG+TGG | + | chr8_1:13063321-13063340 | Msa1179610:exon | 35.0% | |
| TTCTTCTTCATAGCTCCAAA+TGG | - | chr8_1:13063349-13063368 | None:intergenic | 35.0% | |
| ATATGTCCCCAACAAAAGTA+TGG | + | chr8_1:13063446-13063465 | Msa1179610:CDS | 35.0% | |
| ! | CATGTTCCATACTTTTGTTG+GGG | - | chr8_1:13063455-13063474 | None:intergenic | 35.0% |
| ! | CACATGTTCCATACTTTTGT+TGG | - | chr8_1:13063457-13063476 | None:intergenic | 35.0% |
| AGATGATGTTAGTGCAATTG+AGG | + | chr8_1:13063500-13063519 | Msa1179610:CDS | 35.0% | |
| TGATCTCTTATCTGAACTTG+TGG | - | chr8_1:13063604-13063623 | None:intergenic | 35.0% | |
| !! | AATTTTGGAAGTGGGTTTTC+TGG | + | chr8_1:13063630-13063649 | Msa1179610:CDS | 35.0% |
| TCAGAACAAGAAAGGAGAAA+AGG | + | chr8_1:13063723-13063742 | Msa1179610:CDS | 35.0% | |
| AAAGGAGAAAAGGAATTCCA+TGG | + | chr8_1:13063733-13063752 | Msa1179610:CDS | 35.0% | |
| AATTTGGAAAAGGAGATTGG+AGG | + | chr8_1:13064077-13064096 | Msa1179610:CDS | 35.0% | |
| TTACCATGTTGACCTGTTAT+CGG | - | chr8_1:13064268-13064287 | None:intergenic | 35.0% | |
| CACAATCCCTTCAAATACAA+TGG | + | chr8_1:13064288-13064307 | Msa1179610:CDS | 35.0% | |
| CCTAAACCCATTGTATTTGA+AGG | - | chr8_1:13064298-13064317 | None:intergenic | 35.0% | |
| ! | CCTTCAAATACAATGGGTTT+AGG | + | chr8_1:13064295-13064314 | Msa1179610:CDS | 35.0% |
| ! | TAAGCAAGAGGTACAACATA+AGG | - | chr8_1:13064478-13064497 | None:intergenic | 35.0% |
| AAAGAAAGAGGAGATGTCAT+TGG | - | chr8_1:13064525-13064544 | None:intergenic | 35.0% | |
| AGTTTAGGAGAGTTGGATTT+CGG | + | chr8_1:13064566-13064585 | Msa1179610:three_prime_UTR | 35.0% | |
| GTCAGATTCTTGTGGAATTT+AGG | + | chr8_1:13064690-13064709 | Msa1179610:intron | 35.0% | |
| TAGATTTCCTTATTAGGTGG+TGG | + | chr8_1:13064934-13064953 | Msa1179610:three_prime_UTR | 35.0% | |
| AGATTTCCTTATTAGGTGGT+GGG | + | chr8_1:13064935-13064954 | Msa1179610:three_prime_UTR | 35.0% | |
| GAGAAGTTCATTACTTTCCT+TGG | - | chr8_1:13065000-13065019 | None:intergenic | 35.0% | |
| ACATGACATGGTAGTATAGA+GGG | - | chr8_1:13063185-13063204 | None:intergenic | 35.0% | |
| TACATGACATGGTAGTATAG+AGG | - | chr8_1:13063186-13063205 | None:intergenic | 35.0% | |
| GAATTTGTCTCTACATGACA+TGG | - | chr8_1:13063197-13063216 | None:intergenic | 35.0% | |
| !!! | GTAAGTCTTTTTTGTGAGTG+TGG | - | chr8_1:13063219-13063238 | None:intergenic | 35.0% |
| TGGTTCAAAGTTTAGAGGAT+GGG | - | chr8_1:13063279-13063298 | None:intergenic | 35.0% | |
| ATGGTTCAAAGTTTAGAGGA+TGG | - | chr8_1:13063280-13063299 | None:intergenic | 35.0% | |
| ! | GGTTATTGGTTGGATTTCTT+TGG | - | chr8_1:13063307-13063326 | None:intergenic | 35.0% |
| ! | ATGACATGTTGGTTATTGGT+TGG | - | chr8_1:13063317-13063336 | None:intergenic | 35.0% |
| ! | CTTGATGACATGTTGGTTAT+TGG | - | chr8_1:13063321-13063340 | None:intergenic | 35.0% |
| ATAACCAACATGTCATCAAG+TGG | + | chr8_1:13063321-13063340 | Msa1179610:exon | 35.0% | |
| TTCTTCTTCATAGCTCCAAA+TGG | - | chr8_1:13063349-13063368 | None:intergenic | 35.0% | |
| ATATGTCCCCAACAAAAGTA+TGG | + | chr8_1:13063446-13063465 | Msa1179610:CDS | 35.0% | |
| ! | CATGTTCCATACTTTTGTTG+GGG | - | chr8_1:13063455-13063474 | None:intergenic | 35.0% |
| ! | CACATGTTCCATACTTTTGT+TGG | - | chr8_1:13063457-13063476 | None:intergenic | 35.0% |
| AGATGATGTTAGTGCAATTG+AGG | + | chr8_1:13063500-13063519 | Msa1179610:CDS | 35.0% | |
| TGATCTCTTATCTGAACTTG+TGG | - | chr8_1:13063604-13063623 | None:intergenic | 35.0% | |
| !! | AATTTTGGAAGTGGGTTTTC+TGG | + | chr8_1:13063630-13063649 | Msa1179610:CDS | 35.0% |
| TCAGAACAAGAAAGGAGAAA+AGG | + | chr8_1:13063723-13063742 | Msa1179610:CDS | 35.0% | |
| AAAGGAGAAAAGGAATTCCA+TGG | + | chr8_1:13063733-13063752 | Msa1179610:CDS | 35.0% | |
| AATTTGGAAAAGGAGATTGG+AGG | + | chr8_1:13064077-13064096 | Msa1179610:CDS | 35.0% | |
| TTACCATGTTGACCTGTTAT+CGG | - | chr8_1:13064268-13064287 | None:intergenic | 35.0% | |
| CACAATCCCTTCAAATACAA+TGG | + | chr8_1:13064288-13064307 | Msa1179610:CDS | 35.0% | |
| CCTAAACCCATTGTATTTGA+AGG | - | chr8_1:13064298-13064317 | None:intergenic | 35.0% | |
| ! | CCTTCAAATACAATGGGTTT+AGG | + | chr8_1:13064295-13064314 | Msa1179610:CDS | 35.0% |
| ! | TAAGCAAGAGGTACAACATA+AGG | - | chr8_1:13064478-13064497 | None:intergenic | 35.0% |
| AAAGAAAGAGGAGATGTCAT+TGG | - | chr8_1:13064525-13064544 | None:intergenic | 35.0% | |
| AGTTTAGGAGAGTTGGATTT+CGG | + | chr8_1:13064566-13064585 | Msa1179610:three_prime_UTR | 35.0% | |
| GTCAGATTCTTGTGGAATTT+AGG | + | chr8_1:13064690-13064709 | Msa1179610:intron | 35.0% | |
| TAGATTTCCTTATTAGGTGG+TGG | + | chr8_1:13064934-13064953 | Msa1179610:three_prime_UTR | 35.0% | |
| AGATTTCCTTATTAGGTGGT+GGG | + | chr8_1:13064935-13064954 | Msa1179610:three_prime_UTR | 35.0% | |
| GAGAAGTTCATTACTTTCCT+TGG | - | chr8_1:13065000-13065019 | None:intergenic | 35.0% | |
| CAGGATAAGGAGAAGAATCA+TGG | - | chr8_1:13063158-13063177 | None:intergenic | 40.0% | |
| CAAAGTTTAGAGGATGGGAA+TGG | - | chr8_1:13063274-13063293 | None:intergenic | 40.0% | |
| AGAATGCTATAGCCATGCAT+TGG | + | chr8_1:13063379-13063398 | Msa1179610:CDS | 40.0% | |
| GATGTTAGTGCAATTGAGGA+AGG | + | chr8_1:13063504-13063523 | Msa1179610:CDS | 40.0% | |
| TTTACCACTACTATGGTGTG+TGG | - | chr8_1:13063676-13063695 | None:intergenic | 40.0% | |
| ACACACCATAGTAGTGGTAA+AGG | + | chr8_1:13063675-13063694 | Msa1179610:CDS | 40.0% | |
| ATCCACCTTTACCACTACTA+TGG | - | chr8_1:13063683-13063702 | None:intergenic | 40.0% | |
| CATCGTCATCAGAACAAGAA+AGG | + | chr8_1:13063715-13063734 | Msa1179610:CDS | 40.0% | |
| CAGACAAACAGATAGACAGA+CGG | - | chr8_1:13063903-13063922 | None:intergenic | 40.0% | |
| !! | AATCATCAAGCACCGATAAC+AGG | + | chr8_1:13064253-13064272 | Msa1179610:CDS | 40.0% |
| ! | TGGATGATGATGAGGATGAT+GGG | - | chr8_1:13064455-13064474 | None:intergenic | 40.0% |
| ! | ACATAAGGTGGATGATGATG+AGG | - | chr8_1:13064463-13064482 | None:intergenic | 40.0% |
| AGATGTCATTGGTGCATTGT+TGG | - | chr8_1:13064514-13064533 | None:intergenic | 40.0% | |
| TGCCAATGTGAGAATCTCAT+CGG | - | chr8_1:13064658-13064677 | None:intergenic | 40.0% | |
| CAGGATAAGGAGAAGAATCA+TGG | - | chr8_1:13063158-13063177 | None:intergenic | 40.0% | |
| CAAAGTTTAGAGGATGGGAA+TGG | - | chr8_1:13063274-13063293 | None:intergenic | 40.0% | |
| AGAATGCTATAGCCATGCAT+TGG | + | chr8_1:13063379-13063398 | Msa1179610:CDS | 40.0% | |
| GATGTTAGTGCAATTGAGGA+AGG | + | chr8_1:13063504-13063523 | Msa1179610:CDS | 40.0% | |
| TTTACCACTACTATGGTGTG+TGG | - | chr8_1:13063676-13063695 | None:intergenic | 40.0% | |
| ACACACCATAGTAGTGGTAA+AGG | + | chr8_1:13063675-13063694 | Msa1179610:CDS | 40.0% | |
| ATCCACCTTTACCACTACTA+TGG | - | chr8_1:13063683-13063702 | None:intergenic | 40.0% | |
| CATCGTCATCAGAACAAGAA+AGG | + | chr8_1:13063715-13063734 | Msa1179610:CDS | 40.0% | |
| CAGACAAACAGATAGACAGA+CGG | - | chr8_1:13063903-13063922 | None:intergenic | 40.0% | |
| !! | AATCATCAAGCACCGATAAC+AGG | + | chr8_1:13064253-13064272 | Msa1179610:CDS | 40.0% |
| ! | TGGATGATGATGAGGATGAT+GGG | - | chr8_1:13064455-13064474 | None:intergenic | 40.0% |
| ! | ACATAAGGTGGATGATGATG+AGG | - | chr8_1:13064463-13064482 | None:intergenic | 40.0% |
| AGATGTCATTGGTGCATTGT+TGG | - | chr8_1:13064514-13064533 | None:intergenic | 40.0% | |
| TGCCAATGTGAGAATCTCAT+CGG | - | chr8_1:13064658-13064677 | None:intergenic | 40.0% | |
| TGTCATCAAGTGGAGCCATT+TGG | + | chr8_1:13063331-13063350 | Msa1179610:CDS | 45.0% | |
| !!! | GGGTTTTCTGGTTCTGGATT+TGG | + | chr8_1:13063642-13063661 | Msa1179610:CDS | 45.0% |
| CACCATAGTAGTGGTAAAGG+TGG | + | chr8_1:13063678-13063697 | Msa1179610:CDS | 45.0% | |
| !! | GTGGTAAAGGTGGATTGTCA+AGG | + | chr8_1:13063688-13063707 | Msa1179610:CDS | 45.0% |
| CTATGCTCTTCTTCTGTCCA+TGG | - | chr8_1:13063753-13063772 | None:intergenic | 45.0% | |
| ! | CATGGACAGAAGAAGAGCAT+AGG | + | chr8_1:13063751-13063770 | Msa1179610:CDS | 45.0% |
| ! | GAGATTGGAGGAGCATATCA+AGG | + | chr8_1:13064089-13064108 | Msa1179610:CDS | 45.0% |
| TACATTCCTAAACCACCAGG+AGG | - | chr8_1:13064355-13064374 | None:intergenic | 45.0% | |
| CCATACATTCCTAAACCACC+AGG | - | chr8_1:13064358-13064377 | None:intergenic | 45.0% | |
| CCTGGTGGTTTAGGAATGTA+TGG | + | chr8_1:13064355-13064374 | Msa1179610:CDS | 45.0% | |
| CTCATATGGCATCTGCAGTT+GGG | + | chr8_1:13064413-13064432 | Msa1179610:CDS | 45.0% | |
| ! | GGATGATGATGAGGATGATG+GGG | - | chr8_1:13064454-13064473 | None:intergenic | 45.0% |
| ! | GTGGATGATGATGAGGATGA+TGG | - | chr8_1:13064456-13064475 | None:intergenic | 45.0% |
| ! | GCAAGAGGTACAACATAAGG+TGG | - | chr8_1:13064475-13064494 | None:intergenic | 45.0% |
| TGTACCTCTTGCTTACCCTA+TGG | + | chr8_1:13064483-13064502 | Msa1179610:CDS | 45.0% | |
| TGTCATTGGTGCATTGTTGG+AGG | - | chr8_1:13064511-13064530 | None:intergenic | 45.0% | |
| TTAGGAGAGTTGGATTTCGG+AGG | + | chr8_1:13064569-13064588 | Msa1179610:three_prime_UTR | 45.0% | |
| CACCGATGAGATTCTCACAT+TGG | + | chr8_1:13064653-13064672 | Msa1179610:intron | 45.0% | |
| TGAGATTCTCACATTGGCAG+CGG | + | chr8_1:13064659-13064678 | Msa1179610:intron | 45.0% | |
| ! | CCAACATTGGTTGGTTCAGT+TGG | - | chr8_1:13064727-13064746 | None:intergenic | 45.0% |
| CCAACTGAACCAACCAATGT+TGG | + | chr8_1:13064724-13064743 | Msa1179610:three_prime_UTR | 45.0% | |
| AAGAGGAGTTGAGCCAACAT+TGG | - | chr8_1:13064740-13064759 | None:intergenic | 45.0% | |
| TGTCATCAAGTGGAGCCATT+TGG | + | chr8_1:13063331-13063350 | Msa1179610:CDS | 45.0% | |
| !!! | GGGTTTTCTGGTTCTGGATT+TGG | + | chr8_1:13063642-13063661 | Msa1179610:CDS | 45.0% |
| CACCATAGTAGTGGTAAAGG+TGG | + | chr8_1:13063678-13063697 | Msa1179610:CDS | 45.0% | |
| !! | GTGGTAAAGGTGGATTGTCA+AGG | + | chr8_1:13063688-13063707 | Msa1179610:CDS | 45.0% |
| CTATGCTCTTCTTCTGTCCA+TGG | - | chr8_1:13063753-13063772 | None:intergenic | 45.0% | |
| ! | CATGGACAGAAGAAGAGCAT+AGG | + | chr8_1:13063751-13063770 | Msa1179610:CDS | 45.0% |
| ! | GAGATTGGAGGAGCATATCA+AGG | + | chr8_1:13064089-13064108 | Msa1179610:CDS | 45.0% |
| TACATTCCTAAACCACCAGG+AGG | - | chr8_1:13064355-13064374 | None:intergenic | 45.0% | |
| CCATACATTCCTAAACCACC+AGG | - | chr8_1:13064358-13064377 | None:intergenic | 45.0% | |
| CCTGGTGGTTTAGGAATGTA+TGG | + | chr8_1:13064355-13064374 | Msa1179610:CDS | 45.0% | |
| CTCATATGGCATCTGCAGTT+GGG | + | chr8_1:13064413-13064432 | Msa1179610:CDS | 45.0% | |
| ! | GGATGATGATGAGGATGATG+GGG | - | chr8_1:13064454-13064473 | None:intergenic | 45.0% |
| ! | GTGGATGATGATGAGGATGA+TGG | - | chr8_1:13064456-13064475 | None:intergenic | 45.0% |
| ! | GCAAGAGGTACAACATAAGG+TGG | - | chr8_1:13064475-13064494 | None:intergenic | 45.0% |
| TGTACCTCTTGCTTACCCTA+TGG | + | chr8_1:13064483-13064502 | Msa1179610:CDS | 45.0% | |
| TGTCATTGGTGCATTGTTGG+AGG | - | chr8_1:13064511-13064530 | None:intergenic | 45.0% | |
| TTAGGAGAGTTGGATTTCGG+AGG | + | chr8_1:13064569-13064588 | Msa1179610:three_prime_UTR | 45.0% | |
| CACCGATGAGATTCTCACAT+TGG | + | chr8_1:13064653-13064672 | Msa1179610:intron | 45.0% | |
| TGAGATTCTCACATTGGCAG+CGG | + | chr8_1:13064659-13064678 | Msa1179610:intron | 45.0% | |
| ! | CCAACATTGGTTGGTTCAGT+TGG | - | chr8_1:13064727-13064746 | None:intergenic | 45.0% |
| CCAACTGAACCAACCAATGT+TGG | + | chr8_1:13064724-13064743 | Msa1179610:three_prime_UTR | 45.0% | |
| AAGAGGAGTTGAGCCAACAT+TGG | - | chr8_1:13064740-13064759 | None:intergenic | 45.0% | |
| ! | TATAGAGGGTGCGCAGGATA+AGG | - | chr8_1:13063171-13063190 | None:intergenic | 50.0% |
| ! | GGCTCCACTTGATGACATGT+TGG | - | chr8_1:13063328-13063347 | None:intergenic | 50.0% |
| !!! | GGAAGTGGGTTTTCTGGTTC+TGG | + | chr8_1:13063636-13063655 | Msa1179610:CDS | 50.0% |
| GACTCCACACACCATAGTAG+TGG | + | chr8_1:13063669-13063688 | Msa1179610:CDS | 50.0% | |
| !! | GCGTGACTTGCTACTTGTGT+TGG | - | chr8_1:13064136-13064155 | None:intergenic | 50.0% |
| ! | GCACCGATAACAGGTCAACA+TGG | + | chr8_1:13064262-13064281 | Msa1179610:CDS | 50.0% |
| AAACCACCAGGAGGATGATG+AGG | - | chr8_1:13064346-13064365 | None:intergenic | 50.0% | |
| CATCATCCTCCTGGTGGTTT+AGG | + | chr8_1:13064346-13064365 | Msa1179610:CDS | 50.0% | |
| ! | GGAATGTATGGAGCACCAGT+TGG | + | chr8_1:13064367-13064386 | Msa1179610:CDS | 50.0% |
| GCAACAACAGGATGTCCAAC+TGG | - | chr8_1:13064385-13064404 | None:intergenic | 50.0% | |
| TGTTGCTCCTCCTGCTCATA+TGG | + | chr8_1:13064399-13064418 | Msa1179610:CDS | 50.0% | |
| ACTGCAGATGCCATATGAGC+AGG | - | chr8_1:13064412-13064431 | None:intergenic | 50.0% | |
| GCTCATATGGCATCTGCAGT+TGG | + | chr8_1:13064412-13064431 | Msa1179610:CDS | 50.0% | |
| !! | GGATGATGGGGAAGCATAAC+AGG | - | chr8_1:13064442-13064461 | None:intergenic | 50.0% |
| !! | GCATTGTTGGAGGTGCCATA+GGG | - | chr8_1:13064501-13064520 | None:intergenic | 50.0% |
| !! | TGCATTGTTGGAGGTGCCAT+AGG | - | chr8_1:13064502-13064521 | None:intergenic | 50.0% |
| TTGGATTTCGGAGGCTCATC+AGG | + | chr8_1:13064578-13064597 | Msa1179610:three_prime_UTR | 50.0% | |
| TGGATTTCGGAGGCTCATCA+GGG | + | chr8_1:13064579-13064598 | Msa1179610:three_prime_UTR | 50.0% | |
| GGAGTTGAGCCAACATTGGT+TGG | - | chr8_1:13064736-13064755 | None:intergenic | 50.0% | |
| CCAAGACCCACCACCTAATA+AGG | - | chr8_1:13064944-13064963 | None:intergenic | 50.0% | |
| !! | CCTTATTAGGTGGTGGGTCT+TGG | + | chr8_1:13064941-13064960 | Msa1179610:three_prime_UTR | 50.0% |
| ! | TATAGAGGGTGCGCAGGATA+AGG | - | chr8_1:13063171-13063190 | None:intergenic | 50.0% |
| ! | GGCTCCACTTGATGACATGT+TGG | - | chr8_1:13063328-13063347 | None:intergenic | 50.0% |
| !!! | GGAAGTGGGTTTTCTGGTTC+TGG | + | chr8_1:13063636-13063655 | Msa1179610:CDS | 50.0% |
| GACTCCACACACCATAGTAG+TGG | + | chr8_1:13063669-13063688 | Msa1179610:CDS | 50.0% | |
| !! | GCGTGACTTGCTACTTGTGT+TGG | - | chr8_1:13064136-13064155 | None:intergenic | 50.0% |
| ! | GCACCGATAACAGGTCAACA+TGG | + | chr8_1:13064262-13064281 | Msa1179610:CDS | 50.0% |
| AAACCACCAGGAGGATGATG+AGG | - | chr8_1:13064346-13064365 | None:intergenic | 50.0% | |
| CATCATCCTCCTGGTGGTTT+AGG | + | chr8_1:13064346-13064365 | Msa1179610:CDS | 50.0% | |
| ! | GGAATGTATGGAGCACCAGT+TGG | + | chr8_1:13064367-13064386 | Msa1179610:CDS | 50.0% |
| GCAACAACAGGATGTCCAAC+TGG | - | chr8_1:13064385-13064404 | None:intergenic | 50.0% | |
| TGTTGCTCCTCCTGCTCATA+TGG | + | chr8_1:13064399-13064418 | Msa1179610:CDS | 50.0% | |
| ACTGCAGATGCCATATGAGC+AGG | - | chr8_1:13064412-13064431 | None:intergenic | 50.0% | |
| GCTCATATGGCATCTGCAGT+TGG | + | chr8_1:13064412-13064431 | Msa1179610:CDS | 50.0% | |
| !! | GGATGATGGGGAAGCATAAC+AGG | - | chr8_1:13064442-13064461 | None:intergenic | 50.0% |
| !! | GCATTGTTGGAGGTGCCATA+GGG | - | chr8_1:13064501-13064520 | None:intergenic | 50.0% |
| !! | TGCATTGTTGGAGGTGCCAT+AGG | - | chr8_1:13064502-13064521 | None:intergenic | 50.0% |
| TTGGATTTCGGAGGCTCATC+AGG | + | chr8_1:13064578-13064597 | Msa1179610:three_prime_UTR | 50.0% | |
| TGGATTTCGGAGGCTCATCA+GGG | + | chr8_1:13064579-13064598 | Msa1179610:three_prime_UTR | 50.0% | |
| GGAGTTGAGCCAACATTGGT+TGG | - | chr8_1:13064736-13064755 | None:intergenic | 50.0% | |
| CCAAGACCCACCACCTAATA+AGG | - | chr8_1:13064944-13064963 | None:intergenic | 50.0% | |
| !! | CCTTATTAGGTGGTGGGTCT+TGG | + | chr8_1:13064941-13064960 | Msa1179610:three_prime_UTR | 50.0% |
| ! | TGGTAGTATAGAGGGTGCGC+AGG | - | chr8_1:13063177-13063196 | None:intergenic | 55.0% |
| GTTCAGCCTCATCATCCTCC+TGG | + | chr8_1:13064337-13064356 | Msa1179610:CDS | 55.0% | |
| TGAGCAGGAGGAGCAACAAC+AGG | - | chr8_1:13064397-13064416 | None:intergenic | 55.0% | |
| GCAGATGCCATATGAGCAGG+AGG | - | chr8_1:13064409-13064428 | None:intergenic | 55.0% | |
| ! | GGTGCCATAGGGTAAGCAAG+AGG | - | chr8_1:13064490-13064509 | None:intergenic | 55.0% |
| TTTCGGAGGCTCATCAGGGT+CGG | + | chr8_1:13064583-13064602 | Msa1179610:three_prime_UTR | 55.0% | |
| CAGGCTCAGTGTAGTGACAG+AGG | + | chr8_1:13064615-13064634 | Msa1179610:three_prime_UTR | 55.0% | |
| ! | TGGTAGTATAGAGGGTGCGC+AGG | - | chr8_1:13063177-13063196 | None:intergenic | 55.0% |
| GTTCAGCCTCATCATCCTCC+TGG | + | chr8_1:13064337-13064356 | Msa1179610:CDS | 55.0% | |
| TGAGCAGGAGGAGCAACAAC+AGG | - | chr8_1:13064397-13064416 | None:intergenic | 55.0% | |
| GCAGATGCCATATGAGCAGG+AGG | - | chr8_1:13064409-13064428 | None:intergenic | 55.0% | |
| ! | GGTGCCATAGGGTAAGCAAG+AGG | - | chr8_1:13064490-13064509 | None:intergenic | 55.0% |
| TTTCGGAGGCTCATCAGGGT+CGG | + | chr8_1:13064583-13064602 | Msa1179610:three_prime_UTR | 55.0% | |
| CAGGCTCAGTGTAGTGACAG+AGG | + | chr8_1:13064615-13064634 | Msa1179610:three_prime_UTR | 55.0% | |
| CAGCCTCATCATCCTCCTGG+TGG | + | chr8_1:13064340-13064359 | Msa1179610:CDS | 60.0% | |
| TTCGGAGGCTCATCAGGGTC+GGG | + | chr8_1:13064584-13064603 | Msa1179610:three_prime_UTR | 60.0% | |
| TCAGGGTCGGGGAAAGTCTC+AGG | + | chr8_1:13064596-13064615 | Msa1179610:three_prime_UTR | 60.0% | |
| CAGCCTCATCATCCTCCTGG+TGG | + | chr8_1:13064340-13064359 | Msa1179610:CDS | 60.0% | |
| TTCGGAGGCTCATCAGGGTC+GGG | + | chr8_1:13064584-13064603 | Msa1179610:three_prime_UTR | 60.0% | |
| TCAGGGTCGGGGAAAGTCTC+AGG | + | chr8_1:13064596-13064615 | Msa1179610:three_prime_UTR | 60.0% | |
| TCGGAGGCTCATCAGGGTCG+GGG | + | chr8_1:13064585-13064604 | Msa1179610:three_prime_UTR | 65.0% | |
| TCGGAGGCTCATCAGGGTCG+GGG | + | chr8_1:13064585-13064604 | Msa1179610:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 13063132 | 13065029 | 13063132 | ID=Msa1179610;Name=Msa1179610 |
| chr8_1 | mRNA | 13063132 | 13065029 | 13063132 | ID=Msa1179610-mRNA-1;Parent=Msa1179610;Name=Msa1179610-mRNA-1;_AED=0.06;_eAED=0.06;_QI=198|1|1|1|0.5|0.33|3|426|305 |
| chr8_1 | exon | 13063132 | 13063772 | 13063132 | ID=Msa1179610-mRNA-1:exon:4685;Parent=Msa1179610-mRNA-1 |
| chr8_1 | exon | 13064054 | 13064636 | 13064054 | ID=Msa1179610-mRNA-1:exon:4686;Parent=Msa1179610-mRNA-1 |
| chr8_1 | exon | 13064712 | 13065029 | 13064712 | ID=Msa1179610-mRNA-1:exon:4687;Parent=Msa1179610-mRNA-1 |
| chr8_1 | five_prime_UTR | 13063132 | 13063329 | 13063132 | ID=Msa1179610-mRNA-1:five_prime_utr;Parent=Msa1179610-mRNA-1 |
| chr8_1 | CDS | 13063330 | 13063772 | 13063330 | ID=Msa1179610-mRNA-1:cds;Parent=Msa1179610-mRNA-1 |
| chr8_1 | CDS | 13064054 | 13064528 | 13064054 | ID=Msa1179610-mRNA-1:cds;Parent=Msa1179610-mRNA-1 |
| chr8_1 | three_prime_UTR | 13064529 | 13064636 | 13064529 | ID=Msa1179610-mRNA-1:three_prime_utr;Parent=Msa1179610-mRNA-1 |
| chr8_1 | three_prime_UTR | 13064712 | 13065029 | 13064712 | ID=Msa1179610-mRNA-1:three_prime_utr;Parent=Msa1179610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
