AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1033450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1033450 MtrunA17_Chr7g0256041 97.778 180 4 0 15 194 181 360 8.52e-133 376
Msa1033450 MtrunA17_Chr7g0235331 61.682 107 41 0 84 190 19 125 5.95e-48 153
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1033450 AT4G18593.1 60.748 107 37 2 84 190 27 128 1.25e-45 147
Msa1033450 AT4G18593.2 60.748 107 37 2 84 190 27 128 1.25e-45 147

Find 84 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATTTAGCTTATAGTTAA+TGG 0.127766 7_1:-68575931 Msa1033450:three_prime_UTR
GATTCATTAGACTTGTTAAA+AGG 0.260913 7_1:+68576892 None:intergenic
GATTATTATACAACTCTATT+AGG 0.268265 7_1:+68575780 None:intergenic
CCCGTTTGGGATACTTCAAT+TGG 0.323463 7_1:-68576470 Msa1033450:CDS
ATTCTAGTTACTTGTGTGTA+AGG 0.339464 7_1:-68575829 Msa1033450:three_prime_UTR
CCGTAGAGGCTCAATAAATA+TGG 0.345431 7_1:+68576858 None:intergenic
TGCTCATTGTGATGCCCGTT+TGG 0.347710 7_1:-68576484 Msa1033450:CDS
ATATTATCCTATCTATTATA+TGG 0.370188 7_1:-68575737 Msa1033450:three_prime_UTR
GTTGAAAATGTTTGAGGAGA+TGG 0.370927 7_1:-68578860 Msa1033450:CDS
GGGGAGGGTGAGACATCCTT+TGG 0.382903 7_1:-68576940 Msa1033450:CDS
AGAACCTGAATGTTCTTGTT+AGG 0.383393 7_1:-68576018 Msa1033450:three_prime_UTR
CCTATAGTTGAAAATGTTTG+AGG 0.385792 7_1:-68578866 Msa1033450:intron
CTCAACTGCAAATGAAGTTA+TGG 0.385930 7_1:-68576261 Msa1033450:three_prime_UTR
TCAGGTGAGAATCATTTCTC+AGG 0.388064 7_1:-68577132 Msa1033450:intron
AGACGAAAGCGCTTGTATAC+AGG 0.393097 7_1:+68578814 None:intergenic
ACTTGTGTGTAAGGTTTGTT+TGG 0.399375 7_1:-68575820 Msa1033450:three_prime_UTR
CATATACTCATGTCTCGATA+AGG 0.420537 7_1:-68576342 Msa1033450:three_prime_UTR
GTTTGAGGAGATGGGTTTCA+AGG 0.423864 7_1:-68578851 Msa1033450:CDS
TCTAAGCTTGGTGCAGATCC+TGG 0.425042 7_1:-68577093 Msa1033450:CDS
TTGAAAATGTTTGAGGAGAT+GGG 0.427324 7_1:-68578859 Msa1033450:CDS
ATGACCTAACAAGAACATTC+AGG 0.429426 7_1:+68576014 None:intergenic
CATGTCGTAGATCATATTCC+TGG 0.438405 7_1:-68576961 Msa1033450:CDS
AGGCTAAACAAATGCAGTTA+TGG 0.439147 7_1:-68576201 Msa1033450:three_prime_UTR
TACAATGCAGCTGTGGAAGC+TGG 0.443294 7_1:-68576440 Msa1033450:CDS
GTAAGGTTTGTTTGGTGGCT+AGG 0.447993 7_1:-68575812 Msa1033450:three_prime_UTR
GCTCATTGTGATGCCCGTTT+GGG 0.448209 7_1:-68576483 Msa1033450:CDS
CAGTCTGCCATATAATAGAT+AGG 0.455534 7_1:+68575730 None:intergenic
ACCTCTGAAGAAGTTTCAAC+AGG 0.461123 7_1:+68577066 None:intergenic
TCAAAATCAACGTATATTCA+AGG 0.464588 7_1:+68576059 None:intergenic
CCCAATTGAAGTATCCCAAA+CGG 0.465316 7_1:+68576469 None:intergenic
GAAGTTTCAACAGGCATGCC+AGG 0.467127 7_1:+68577075 None:intergenic
CATACCTGCTCAAGATTTCG+AGG 0.473613 7_1:-68576221 Msa1033450:three_prime_UTR
ATATACTCATGTCTCGATAA+GGG 0.476211 7_1:-68576341 Msa1033450:three_prime_UTR
CCATATTTATTGAGCCTCTA+CGG 0.478853 7_1:-68576858 Msa1033450:CDS
GTCCAAGAACAATGGAGAAA+AGG 0.479438 7_1:+68576312 None:intergenic
TTGGGATACTTCAATTGGGC+AGG 0.489311 7_1:-68576465 Msa1033450:CDS
AGGGTGAGACATCCTTTGGC+TGG 0.503541 7_1:-68576936 Msa1033450:CDS
GGCTGGCACAAGCGGAAAAG+TGG 0.513620 7_1:-68576919 Msa1033450:CDS
TGTGTGTAAGGTTTGTTTGG+TGG 0.515460 7_1:-68575817 Msa1033450:three_prime_UTR
CCAATTGAAGTATCCCAAAC+GGG 0.519074 7_1:+68576470 None:intergenic
TGTTGAAACTTCTTCAGAGG+TGG 0.520731 7_1:-68577064 Msa1033450:CDS
CCGTTTGGGATACTTCAATT+GGG 0.524019 7_1:-68576469 Msa1033450:CDS
GTTGTATAATAATCAGATAG+AGG 0.525159 7_1:-68575771 Msa1033450:three_prime_UTR
TTTCCGCTTGTGCCAGCCAA+AGG 0.528514 7_1:+68576924 None:intergenic
AGTTGAGGAAGGCGCGTTGG+AGG 0.531978 7_1:-68576520 Msa1033450:CDS
CATCCTTTGGCTGGCACAAG+CGG 0.533168 7_1:-68576927 Msa1033450:CDS
CTCAGTTGAGGAAGGCGCGT+TGG 0.536953 7_1:-68576523 Msa1033450:intron
CTATCTATTATATGGCAGAC+TGG 0.542968 7_1:-68575729 Msa1033450:three_prime_UTR
CAGGTGAGAATCATTTCTCA+GGG 0.543545 7_1:-68577131 Msa1033450:CDS
AAGGATGTCTCACCCTCCCC+AGG 0.546506 7_1:+68576943 None:intergenic
AGGATAGACAGTTCTAAGCT+TGG 0.546865 7_1:-68577105 Msa1033450:CDS
ATGTCGTAGATCATATTCCT+GGG 0.548003 7_1:-68576960 Msa1033450:CDS
TAGTCAAGTGTGCTTTGTCA+TGG 0.548729 7_1:-68575703 None:intergenic
TCATTTGCAGTTGAGCAGCT+AGG 0.551230 7_1:+68576269 None:intergenic
GTGGTGCAACAAGACTTACA+TGG 0.552624 7_1:+68576371 None:intergenic
GACGAAAGCGCTTGTATACA+GGG 0.552682 7_1:+68578815 None:intergenic
CAAATGCAGTTATGGTTGAG+AGG 0.555563 7_1:-68576193 Msa1033450:three_prime_UTR
TTAGCCTCGAAATCTTGAGC+AGG 0.555819 7_1:+68576217 None:intergenic
CACTTCTTGCAGCGATATGT+AGG 0.556043 7_1:+68577009 None:intergenic
CCTCTACGGTGGATGAAAGA+TGG 0.560281 7_1:-68576844 Msa1033450:intron
GCCTGTTGAAACTTCTTCAG+AGG 0.563895 7_1:-68577067 Msa1033450:CDS
GTTGAAACTTCTTCAGAGGT+GGG 0.564173 7_1:-68577063 Msa1033450:CDS
GGATATCAAGTTGTCTCTGT+AGG 0.565292 7_1:-68575973 Msa1033450:three_prime_UTR
TTAACTATAAGCTAAATATG+TGG 0.572608 7_1:+68575934 None:intergenic
GTTGAGGAAGGCGCGTTGGA+GGG 0.574211 7_1:-68576519 Msa1033450:CDS
TCTTGTCACTCAGTTGAGGA+AGG 0.575185 7_1:-68576531 Msa1033450:intron
GATAAGTGTCGATTTCAACT+TGG 0.581969 7_1:+68576118 None:intergenic
ACATGAGTATATGTATAAAG+TGG 0.584720 7_1:+68576352 None:intergenic
AGAATCATTTCTCAGGGTCG+AGG 0.589151 7_1:-68577125 Msa1033450:CDS
TGGTGCAACAAGACTTACAT+GGG 0.594553 7_1:+68576372 None:intergenic
CATTATTAGTCGTTAAATCG+TGG 0.600511 7_1:-68575994 Msa1033450:three_prime_UTR
CGTAGATCATATTCCTGGGG+AGG 0.603657 7_1:-68576956 Msa1033450:CDS
CAAGAACAATGGAGAAAAGG+TGG 0.604929 7_1:+68576315 None:intergenic
AGAAGAATTCAACAATGGGT+TGG 0.611364 7_1:-68580563 None:intergenic
ACGGGCATCACAATGAGCAC+AGG 0.619374 7_1:+68576488 None:intergenic
CCATCTTTCATCCACCGTAG+AGG 0.619573 7_1:+68576844 None:intergenic
GAATGCAAGTCCAAGAACAA+TGG 0.620741 7_1:+68576304 None:intergenic
GTAGATCATATTCCTGGGGA+GGG 0.623117 7_1:-68576955 Msa1033450:CDS
AACTATAGATATTGCATACG+AGG 0.648362 7_1:-68580526 Msa1033450:intron
GCAGGCATACAATGCAGCTG+TGG 0.649537 7_1:-68576447 Msa1033450:CDS
TATTTATTGAGCCTCTACGG+TGG 0.683041 7_1:-68576855 Msa1033450:CDS
CTTGCAATGCAACAATACGA+CGG 0.704891 7_1:+68576986 None:intergenic
TGTCGTAGATCATATTCCTG+GGG 0.712970 7_1:-68576959 Msa1033450:CDS
GGTGCAACAAGACTTACATG+GGG 0.765081 7_1:+68576373 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAATTTTGAATTCTATT+TGG + chr7_1:68575824-68575843 None:intergenic 10.0%
!! ATATTTATGATATATTTAGT+TGG - chr7_1:68576630-68576649 Msa1033450:intron 10.0%
!!! TAAATATAATTTGTAGATTA+AGG - chr7_1:68576757-68576776 Msa1033450:intron 10.0%
!!! AAATATAATTTGTAGATTAA+GGG - chr7_1:68576758-68576777 Msa1033450:intron 10.0%
!! ATTCAAAATATTATAAAAGA+CGG + chr7_1:68579556-68579575 None:intergenic 10.0%
!!! ATTAAATTTAGGTCTTTTAA+TGG - chr7_1:68575923-68575942 Msa1033450:three_prime_UTR 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG - chr7_1:68576427-68576446 Msa1033450:CDS 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG - chr7_1:68576428-68576447 Msa1033450:CDS 15.0%
!! AAAGTGAAATATATTGTATT+GGG - chr7_1:68576452-68576471 Msa1033450:CDS 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr7_1:68576492-68576511 Msa1033450:CDS 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr7_1:68576493-68576512 Msa1033450:CDS 15.0%
!!! ACACTTTTTTTTTAGAAAAT+GGG - chr7_1:68576563-68576582 Msa1033450:intron 15.0%
!! ATTGTAAATGTCATATAAAA+TGG + chr7_1:68576692-68576711 None:intergenic 15.0%
!! TTATAAACAAAAAAGTTCTT+CGG + chr7_1:68577133-68577152 None:intergenic 15.0%
!! AAGTTAACATAAAAAAACAT+AGG + chr7_1:68577652-68577671 None:intergenic 15.0%
!!! TACTTTCAAAAACTTTTAAA+AGG + chr7_1:68577744-68577763 None:intergenic 15.0%
!!! TTTTAAAAGTTTTTGAAAGT+AGG - chr7_1:68577743-68577762 Msa1033450:intron 15.0%
!! AAAGAAAAAAAACTTATGAA+AGG + chr7_1:68578221-68578240 None:intergenic 15.0%
!!! CATTTTTTAAGTTTTTCTTT+GGG + chr7_1:68578493-68578512 None:intergenic 15.0%
!!! TCATTTTTTAAGTTTTTCTT+TGG + chr7_1:68578494-68578513 None:intergenic 15.0%
!!! ACTTTTATTCATAAATACAA+AGG + chr7_1:68578934-68578953 None:intergenic 15.0%
!! ATATTATCCTATCTATTATA+TGG - chr7_1:68580518-68580537 Msa1033450:intron 15.0%
!!! GCAATATCTATAGTTATTTT+TGG + chr7_1:68575724-68575743 None:intergenic 20.0%
!!! TATGCTTTTATTTAATCACA+CGG - chr7_1:68575787-68575806 Msa1033450:three_prime_UTR 20.0%
!!! GAATTCAAAATTTTAACCAT+CGG - chr7_1:68575828-68575847 Msa1033450:three_prime_UTR 20.0%
!!! ACTTTGATAATTATACACAA+AGG - chr7_1:68575888-68575907 Msa1033450:three_prime_UTR 20.0%
!! AACAAAATTTGATAGAAAAG+AGG - chr7_1:68576182-68576201 Msa1033450:three_prime_UTR 20.0%
!! GATAAAAAGTGAATGAATTA+AGG + chr7_1:68576299-68576318 None:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG - chr7_1:68576429-68576448 Msa1033450:CDS 20.0%
!! GAAAGTGAAATATATTGTAT+TGG - chr7_1:68576451-68576470 Msa1033450:CDS 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - chr7_1:68576525-68576544 Msa1033450:intron 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - chr7_1:68576526-68576545 Msa1033450:intron 20.0%
!!! GACACTTTTTTTTTAGAAAA+TGG - chr7_1:68576562-68576581 Msa1033450:intron 20.0%
!!! ATACGAGTATCTTTTAAAAA+TGG - chr7_1:68577107-68577126 Msa1033450:CDS 20.0%
!! ACAAATGACATAAAAGTAAA+AGG + chr7_1:68577593-68577612 None:intergenic 20.0%
!!! TCAAAAACTTTTAAAAGGAA+TGG + chr7_1:68577739-68577758 None:intergenic 20.0%
!!! TTTTAGTGTTAGTGAAAAAT+AGG - chr7_1:68578016-68578035 Msa1033450:intron 20.0%
!!! GTTTTTTTTCTTTCTTTCAT+TGG - chr7_1:68578228-68578247 Msa1033450:intron 20.0%
!!! CTATTAATACATTTTAGTCA+AGG + chr7_1:68578551-68578570 None:intergenic 20.0%
!!! CGTTTTAAAATTAACTACAT+TGG + chr7_1:68578577-68578596 None:intergenic 20.0%
!! TGATAATTATTTGAATCCTT+TGG - chr7_1:68578875-68578894 Msa1033450:intron 20.0%
!!! ATTTTGATTCAAAAGCAATT+GGG - chr7_1:68580212-68580231 Msa1033450:intron 20.0%
!! TTAACTATAAGCTAAATATG+TGG + chr7_1:68580324-68580343 None:intergenic 20.0%
!!! CATATTTAGCTTATAGTTAA+TGG - chr7_1:68580324-68580343 Msa1033450:intron 20.0%
!! GATTATTATACAACTCTATT+AGG + chr7_1:68580478-68580497 None:intergenic 20.0%
!!! ATCTATAGTTATTTTTGGTG+AGG + chr7_1:68575719-68575738 None:intergenic 25.0%
!!! ATGCTTTTATTTAATCACAC+GGG - chr7_1:68575788-68575807 Msa1033450:three_prime_UTR 25.0%
!! CAAAGTAAATTACACCATTT+TGG + chr7_1:68575874-68575893 None:intergenic 25.0%
!! TTAGGTCTTTTAATGGTTAA+TGG - chr7_1:68575930-68575949 Msa1033450:three_prime_UTR 25.0%
!!! TTGTTTGATTTGGTCTATTT+AGG + chr7_1:68576126-68576145 None:intergenic 25.0%
! AAATTTGATAGAAAAGAGGA+CGG - chr7_1:68576186-68576205 Msa1033450:three_prime_UTR 25.0%
! TACACTCTTTACAATATTCA+TGG - chr7_1:68576822-68576841 Msa1033450:intron 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + chr7_1:68576910-68576929 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr7_1:68576909-68576928 Msa1033450:CDS 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr7_1:68576922-68576941 Msa1033450:CDS 25.0%
!!! TGGTTGTTTTCTTCTTTTTT+CGG - chr7_1:68577197-68577216 Msa1033450:intron 25.0%
! AATGTTTATGTTTGACAATG+AGG - chr7_1:68577337-68577356 Msa1033450:intron 25.0%
! TATATGATAATATGAGCATG+AGG + chr7_1:68577517-68577536 None:intergenic 25.0%
! TCATGCTCATATTATCATAT+AGG - chr7_1:68577516-68577535 Msa1033450:intron 25.0%
! AAAAAACATAGGAAGAGAAA+AGG + chr7_1:68577641-68577660 None:intergenic 25.0%
! AAAAAACACATTGTCTGAAA+AGG + chr7_1:68577691-68577710 None:intergenic 25.0%
! CAAAAGATAAATTTGTGCTT+TGG - chr7_1:68578060-68578079 Msa1033450:intron 25.0%
! GAAAAAAAACTTATGAAAGG+TGG + chr7_1:68578218-68578237 None:intergenic 25.0%
!! TTTTCTTAGTTTCCCAATAT+CGG + chr7_1:68578265-68578284 None:intergenic 25.0%
! GAAACTAAGAAAATGCATTA+GGG - chr7_1:68578272-68578291 Msa1033450:intron 25.0%
!!! TTTTTGGGGAGTATTTTTTA+AGG + chr7_1:68578398-68578417 None:intergenic 25.0%
!!! TCAAGGAAGATTATTTTATC+TGG + chr7_1:68578534-68578553 None:intergenic 25.0%
! AAAACGAATTAACGTAGATT+TGG - chr7_1:68578591-68578610 Msa1033450:intron 25.0%
! GTTGAGATACAAATAAATAG+TGG - chr7_1:68578613-68578632 Msa1033450:intron 25.0%
!!! AATGTCCACTTTAGAATATT+CGG + chr7_1:68578699-68578718 None:intergenic 25.0%
!!! GATTCATTAGACTTGTTAAA+AGG + chr7_1:68579366-68579385 None:intergenic 25.0%
! AAGTCAAATTCAATTCTTGT+TGG + chr7_1:68579479-68579498 None:intergenic 25.0%
!! GCATATTACCAAAATTTTCT+TGG - chr7_1:68579583-68579602 Msa1033450:intron 25.0%
!! TTAATGCTCCAAGAAAATTT+TGG + chr7_1:68579594-68579613 None:intergenic 25.0%
! CGCATAAATATGCATAAAAA+TGG - chr7_1:68579678-68579697 Msa1033450:intron 25.0%
! ACATGAGTATATGTATAAAG+TGG + chr7_1:68579906-68579925 None:intergenic 25.0%
!! CTTCTTCCAAAATGATTTTT+AGG - chr7_1:68580110-68580129 Msa1033450:intron 25.0%
! TCAAAATCAACGTATATTCA+AGG + chr7_1:68580199-68580218 None:intergenic 25.0%
!!! GATTTTGATTCAAAAGCAAT+TGG - chr7_1:68580211-68580230 Msa1033450:intron 25.0%
!!! TTACTAGTTTTCTTCATGTT+GGG + chr7_1:68580368-68580387 None:intergenic 25.0%
!!! ATTACTAGTTTTCTTCATGT+TGG + chr7_1:68580369-68580388 None:intergenic 25.0%
! GTTGTATAATAATCAGATAG+AGG - chr7_1:68580484-68580503 Msa1033450:intron 25.0%
AACTATAGATATTGCATACG+AGG - chr7_1:68575729-68575748 Msa1033450:three_prime_UTR 30.0%
TAGTACTATCATGTCCAAAA+TGG - chr7_1:68575857-68575876 Msa1033450:three_prime_UTR 30.0%
TGAGAGATCAACATACAATA+TGG - chr7_1:68576053-68576072 Msa1033450:three_prime_UTR 30.0%
!! GAACTACCTTTCAAGTTAAA+TGG - chr7_1:68576212-68576231 Msa1033450:three_prime_UTR 30.0%
!! TCATGACCATTTAACTTGAA+AGG + chr7_1:68576221-68576240 None:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG - chr7_1:68576539-68576558 Msa1033450:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG - chr7_1:68576540-68576559 Msa1033450:intron 30.0%
TATTATGAATCCCTATGACT+TGG + chr7_1:68576660-68576679 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG + chr7_1:68576884-68576903 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr7_1:68576935-68576954 Msa1033450:CDS 30.0%
ATATGCATCTTGAACTTATG+TGG - chr7_1:68577177-68577196 Msa1033450:intron 30.0%
! CCTCAAACATTTTCAACTAT+AGG + chr7_1:68577392-68577411 None:intergenic 30.0%
CCTATAGTTGAAAATGTTTG+AGG - chr7_1:68577389-68577408 Msa1033450:intron 30.0%
TTGAAAATGTTTGAGGAGAT+GGG - chr7_1:68577396-68577415 Msa1033450:intron 30.0%
TCGTCTAAAAATACTAGGTA+TGG - chr7_1:68577458-68577477 Msa1033450:intron 30.0%
TGCTCATATTATCATATAGG+TGG - chr7_1:68577519-68577538 Msa1033450:intron 30.0%
! AGTGACAACTTGTATTGTTT+TGG - chr7_1:68577547-68577566 Msa1033450:intron 30.0%
GACAACATTAGTACAGATTT+GGG + chr7_1:68577800-68577819 None:intergenic 30.0%
TGACAACATTAGTACAGATT+TGG + chr7_1:68577801-68577820 None:intergenic 30.0%
GTACTAATGTTGTCAAATAG+TGG - chr7_1:68577806-68577825 Msa1033450:intron 30.0%
!! TGTTTAAGAGCTAGCTTTAA+CGG - chr7_1:68577891-68577910 Msa1033450:intron 30.0%
TAGTGTTAGTGAAAAATAGG+TGG - chr7_1:68578019-68578038 Msa1033450:intron 30.0%
AGTGTTAGTGAAAAATAGGT+GGG - chr7_1:68578020-68578039 Msa1033450:intron 30.0%
!!! AGTTTTGAGGATTGAAGAAT+GGG - chr7_1:68578162-68578181 Msa1033450:intron 30.0%
GGAAACTAAGAAAATGCATT+AGG - chr7_1:68578271-68578290 Msa1033450:intron 30.0%
!! TAAGTTTTTCTTTGGGAGTT+AGG + chr7_1:68578486-68578505 None:intergenic 30.0%
!! TGGGAGTATCAAATTAAATC+AGG - chr7_1:68578732-68578751 Msa1033450:intron 30.0%
CTAATTGTAGCAATAGATTC+CGG - chr7_1:68578904-68578923 Msa1033450:intron 30.0%
ATGAATAAAAGTCCTTACCA+TGG - chr7_1:68578942-68578961 Msa1033450:intron 30.0%
AGTTTGATATACAACAACCA+TGG + chr7_1:68578962-68578981 None:intergenic 30.0%
ATAGTACACAATCATCACAT+TGG + chr7_1:68579038-68579057 None:intergenic 30.0%
AATGTGATGATTGTGTACTA+TGG - chr7_1:68579037-68579056 Msa1033450:intron 30.0%
ATGTGATGATTGTGTACTAT+GGG - chr7_1:68579038-68579057 Msa1033450:intron 30.0%
CTAGTAATTTATGTCATCTG+AGG - chr7_1:68579079-68579098 Msa1033450:intron 30.0%
!!! GAAATATCTCTCCTTTTTTC+AGG - chr7_1:68579105-68579124 Msa1033450:intron 30.0%
AATGATTCTCACCTGAAAAA+AGG + chr7_1:68579119-68579138 None:intergenic 30.0%
!! ACTAAATAATGAGAGCATCT+TGG + chr7_1:68579518-68579537 None:intergenic 30.0%
! GAATGTTTTCTATGTTTGAG+TGG - chr7_1:68579615-68579634 Msa1033450:intron 30.0%
TTTATGCATATTTATGCGCA+CGG + chr7_1:68579676-68579695 None:intergenic 30.0%
! CTTTTCAACTACACAAAAGT+CGG - chr7_1:68579848-68579867 Msa1033450:intron 30.0%
! TTTTCAACTACACAAAAGTC+GGG - chr7_1:68579849-68579868 Msa1033450:intron 30.0%
ATATACTCATGTCTCGATAA+GGG - chr7_1:68579914-68579933 Msa1033450:intron 30.0%
! GGAGATCCTAAAAATCATTT+TGG + chr7_1:68580119-68580138 None:intergenic 30.0%
CATTATTAGTCGTTAAATCG+TGG - chr7_1:68580261-68580280 Msa1033450:intron 30.0%
! ATTCTAGTTACTTGTGTGTA+AGG - chr7_1:68580426-68580445 Msa1033450:intron 30.0%
GATAGTACTATTCTAACCGA+TGG + chr7_1:68575847-68575866 None:intergenic 35.0%
CAAAGTAGGTCAATTATACC+GGG + chr7_1:68576392-68576411 None:intergenic 35.0%
CCAAAGTAGGTCAATTATAC+CGG + chr7_1:68576393-68576412 None:intergenic 35.0%
TCAGTGTGAAAAACCAAAGT+AGG + chr7_1:68576406-68576425 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG - chr7_1:68576576-68576595 Msa1033450:intron 35.0%
! TGAATTTGTTTGCCCAATGA+TGG - chr7_1:68577268-68577287 Msa1033450:intron 35.0%
GTTGAAAATGTTTGAGGAGA+TGG - chr7_1:68577395-68577414 Msa1033450:intron 35.0%
CGCTTTCGTCTAAAAATACT+AGG - chr7_1:68577453-68577472 Msa1033450:intron 35.0%
!!! GACAACTTGTATTGTTTTGG+TGG - chr7_1:68577550-68577569 Msa1033450:intron 35.0%
GTAGGAATCATGTTAGATGT+TGG - chr7_1:68577761-68577780 Msa1033450:intron 35.0%
TGTGCTAAATTAGCGTATTG+AGG + chr7_1:68577867-68577886 None:intergenic 35.0%
GTGTTAGTGAAAAATAGGTG+GGG - chr7_1:68578021-68578040 Msa1033450:intron 35.0%
!!! GAGTTTTGAGGATTGAAGAA+TGG - chr7_1:68578161-68578180 Msa1033450:intron 35.0%
AGGATTGAAGAATGGGAAAA+GGG - chr7_1:68578169-68578188 Msa1033450:intron 35.0%
AATGCATTAGGGAATAGCTT+TGG - chr7_1:68578283-68578302 Msa1033450:intron 35.0%
!! TTTTTCTTTGGGAGTTAGGA+GGG + chr7_1:68578482-68578501 None:intergenic 35.0%
GACATTTAGTATGAGATGCT+GGG - chr7_1:68578713-68578732 Msa1033450:intron 35.0%
CTACAATTAGACACTACCAA+AGG + chr7_1:68578894-68578913 None:intergenic 35.0%
! TCATAAATACAAAGGCATGC+CGG + chr7_1:68578926-68578945 None:intergenic 35.0%
GATATACAACAACCATGGTA+AGG + chr7_1:68578957-68578976 None:intergenic 35.0%
ATGTCGTAGATCATATTCCT+GGG - chr7_1:68579295-68579314 Msa1033450:intron 35.0%
CCATATTTATTGAGCCTCTA+CGG - chr7_1:68579397-68579416 Msa1033450:intron 35.0%
! AGTGGATTCCTCTATATACA+AGG - chr7_1:68579633-68579652 Msa1033450:intron 35.0%
CCAAAGAACCTTGTATATAG+AGG + chr7_1:68579644-68579663 None:intergenic 35.0%
CCTCTATATACAAGGTTCTT+TGG - chr7_1:68579641-68579660 Msa1033450:intron 35.0%
TATTTCTTGTCACTCAGTTG+AGG - chr7_1:68579720-68579739 Msa1033450:intron 35.0%
! CTTTTGTGTAGTTGAAAAGC+TGG + chr7_1:68579847-68579866 None:intergenic 35.0%
CATATACTCATGTCTCGATA+AGG - chr7_1:68579913-68579932 Msa1033450:intron 35.0%
CTCAACTGCAAATGAAGTTA+TGG - chr7_1:68579994-68580013 Msa1033450:intron 35.0%
AGGCTAAACAAATGCAGTTA+TGG - chr7_1:68580054-68580073 Msa1033450:intron 35.0%
!! GATAAGTGTCGATTTCAACT+TGG + chr7_1:68580140-68580159 None:intergenic 35.0%
AGAACCTGAATGTTCTTGTT+AGG - chr7_1:68580237-68580256 Msa1033450:intron 35.0%
ATGACCTAACAAGAACATTC+AGG + chr7_1:68580244-68580263 None:intergenic 35.0%
! ACTTGTGTGTAAGGTTTGTT+TGG - chr7_1:68580435-68580454 Msa1033450:intron 35.0%
CAGTCTGCCATATAATAGAT+AGG + chr7_1:68580528-68580547 None:intergenic 35.0%
CTATCTATTATATGGCAGAC+TGG - chr7_1:68580526-68580545 Msa1033450:intron 35.0%
TTAGGCCATTCTTCGTGTAT+GGG + chr7_1:68576108-68576127 None:intergenic 40.0%
TTTAGGCCATTCTTCGTGTA+TGG + chr7_1:68576109-68576128 None:intergenic 40.0%
TTCACGTCGCTTGTTTGATT+TGG + chr7_1:68576136-68576155 None:intergenic 40.0%
GATTAAGGTACGAGGGTTTA+GGG + chr7_1:68576328-68576347 None:intergenic 40.0%
!! TTGATGATGCGCTACGATTA+AGG + chr7_1:68576343-68576362 None:intergenic 40.0%
CCGGTATAATTGACCTACTT+TGG - chr7_1:68576390-68576409 Msa1033450:CDS 40.0%
GAAAATGGGTCAGTTATTCC+GGG - chr7_1:68576577-68576596 Msa1033450:intron 40.0%
! TAGTTGGTATGCCAAGTCAT+AGG - chr7_1:68576646-68576665 Msa1033450:intron 40.0%
! AGTTGGTATGCCAAGTCATA+GGG - chr7_1:68576647-68576666 Msa1033450:intron 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG - chr7_1:68576945-68576964 Msa1033450:CDS 40.0%
!! TGCTCTAGAAAGCCATCATT+GGG + chr7_1:68577283-68577302 None:intergenic 40.0%
AGAGCAGGTGTGTATTATGA+AGG - chr7_1:68577297-68577316 Msa1033450:intron 40.0%
TCAAATAGTGGCTAGCATAG+CGG - chr7_1:68577818-68577837 Msa1033450:intron 40.0%
!! GAAAACACTGATTTGTACGC+AGG - chr7_1:68577991-68578010 Msa1033450:intron 40.0%
GAGGATTGAAGAATGGGAAA+AGG - chr7_1:68578168-68578187 Msa1033450:intron 40.0%
TTGAAGAATGGGAAAAGGGA+AGG - chr7_1:68578173-68578192 Msa1033450:intron 40.0%
GACTAAAACCCTCCGATATT+GGG - chr7_1:68578250-68578269 Msa1033450:intron 40.0%
CTTAGTTTCCCAATATCGGA+GGG + chr7_1:68578261-68578280 None:intergenic 40.0%
TCTTAGTTTCCCAATATCGG+AGG + chr7_1:68578262-68578281 None:intergenic 40.0%
!!! CGGAATCTCTCACTTTTTTG+GGG + chr7_1:68578412-68578431 None:intergenic 40.0%
!!! GCGGAATCTCTCACTTTTTT+GGG + chr7_1:68578413-68578432 None:intergenic 40.0%
!!! AGCGGAATCTCTCACTTTTT+TGG + chr7_1:68578414-68578433 None:intergenic 40.0%
TGGGAGGAATGAAAAGTTAG+CGG + chr7_1:68578432-68578451 None:intergenic 40.0%
!! GTTTTTCTTTGGGAGTTAGG+AGG + chr7_1:68578483-68578502 None:intergenic 40.0%
! GACAGCCGAATATTCTAAAG+TGG - chr7_1:68578691-68578710 Msa1033450:intron 40.0%
GGACATTTAGTATGAGATGC+TGG - chr7_1:68578712-68578731 Msa1033450:intron 40.0%
!! GGAGGGCATTAAACAAAACT+GGG + chr7_1:68578809-68578828 None:intergenic 40.0%
!! AGGAGGGCATTAAACAAAAC+TGG + chr7_1:68578810-68578829 None:intergenic 40.0%
TTTGTTTAATGCCCTCCTTG+TGG - chr7_1:68578812-68578831 Msa1033450:CDS 40.0%
ATACCAGAACAGCTACTAGT+AGG + chr7_1:68579000-68579019 None:intergenic 40.0%
TCAGGTGAGAATCATTTCTC+AGG - chr7_1:68579123-68579142 Msa1033450:intron 40.0%
CAGGTGAGAATCATTTCTCA+GGG - chr7_1:68579124-68579143 Msa1033450:intron 40.0%
!! AGGATAGACAGTTCTAAGCT+TGG - chr7_1:68579150-68579169 Msa1033450:intron 40.0%
! ACCTCTGAAGAAGTTTCAAC+AGG + chr7_1:68579192-68579211 None:intergenic 40.0%
TGTTGAAACTTCTTCAGAGG+TGG - chr7_1:68579191-68579210 Msa1033450:intron 40.0%
GTTGAAACTTCTTCAGAGGT+GGG - chr7_1:68579192-68579211 Msa1033450:intron 40.0%
CTTGCAATGCAACAATACGA+CGG + chr7_1:68579272-68579291 None:intergenic 40.0%
CATGTCGTAGATCATATTCC+TGG - chr7_1:68579294-68579313 Msa1033450:intron 40.0%
TGTCGTAGATCATATTCCTG+GGG - chr7_1:68579296-68579315 Msa1033450:intron 40.0%
CCGTAGAGGCTCAATAAATA+TGG + chr7_1:68579400-68579419 None:intergenic 40.0%
TATTTATTGAGCCTCTACGG+TGG - chr7_1:68579400-68579419 Msa1033450:intron 40.0%
! CCAATTGAAGTATCCCAAAC+GGG + chr7_1:68579788-68579807 None:intergenic 40.0%
! CCCAATTGAAGTATCCCAAA+CGG + chr7_1:68579789-68579808 None:intergenic 40.0%
! CCGTTTGGGATACTTCAATT+GGG - chr7_1:68579786-68579805 Msa1033450:intron 40.0%
TGGTGCAACAAGACTTACAT+GGG + chr7_1:68579886-68579905 None:intergenic 40.0%
CAAGAACAATGGAGAAAAGG+TGG + chr7_1:68579943-68579962 None:intergenic 40.0%
! CACCTTTTCTCCATTGTTCT+TGG - chr7_1:68579941-68579960 Msa1033450:intron 40.0%
GTCCAAGAACAATGGAGAAA+AGG + chr7_1:68579946-68579965 None:intergenic 40.0%
GAATGCAAGTCCAAGAACAA+TGG + chr7_1:68579954-68579973 None:intergenic 40.0%
CAAATGCAGTTATGGTTGAG+AGG - chr7_1:68580062-68580081 Msa1033450:intron 40.0%
! GGATATCAAGTTGTCTCTGT+AGG - chr7_1:68580282-68580301 Msa1033450:intron 40.0%
! TGTGTGTAAGGTTTGTTTGG+TGG - chr7_1:68580438-68580457 Msa1033450:intron 40.0%
TGCAACCCATACACGAAGAA+TGG - chr7_1:68576100-68576119 Msa1033450:three_prime_UTR 45.0%
TTTGTCCGTAGTCTAAGAGG+GGG + chr7_1:68576275-68576294 None:intergenic 45.0%
CTTTGTCCGTAGTCTAAGAG+GGG + chr7_1:68576276-68576295 None:intergenic 45.0%
GCTTTGTCCGTAGTCTAAGA+GGG + chr7_1:68576277-68576296 None:intergenic 45.0%
! GTACGAGGGTTTAGGGTTTA+GGG + chr7_1:68576321-68576340 None:intergenic 45.0%
CGATTAAGGTACGAGGGTTT+AGG + chr7_1:68576329-68576348 None:intergenic 45.0%
ATCGTAGCGCATCATCAACA+AGG - chr7_1:68576345-68576364 Msa1033450:three_prime_UTR 45.0%
ATCACATACTACCTTCGTCC+CGG - chr7_1:68576371-68576390 Msa1033450:exon 45.0%
GCTCTGCTTTAACGATGCAA+GGG + chr7_1:68577246-68577265 None:intergenic 45.0%
AGCTCTGCTTTAACGATGCA+AGG + chr7_1:68577247-68577266 None:intergenic 45.0%
!! CTGCTCTAGAAAGCCATCAT+TGG + chr7_1:68577284-68577303 None:intergenic 45.0%
!! CAATGATGGCTTTCTAGAGC+AGG - chr7_1:68577282-68577301 Msa1033450:intron 45.0%
! GTTTGAGGAGATGGGTTTCA+AGG - chr7_1:68577404-68577423 Msa1033450:intron 45.0%
!! GACGAAAGCGCTTGTATACA+GGG + chr7_1:68577443-68577462 None:intergenic 45.0%
!! AGACGAAAGCGCTTGTATAC+AGG + chr7_1:68577444-68577463 None:intergenic 45.0%
TCACGACTTCCTTCATGTTG+TGG - chr7_1:68577489-68577508 Msa1033450:intron 45.0%
CACGACTTCCTTCATGTTGT+GGG - chr7_1:68577490-68577509 Msa1033450:intron 45.0%
!! AGCTAGCTTTAACGGCACTA+CGG - chr7_1:68577899-68577918 Msa1033450:intron 45.0%
TCACGAATCGCGAAGAATAG+TGG + chr7_1:68577969-68577988 None:intergenic 45.0%
TTCCTCTGTCTTGCATAGCT+AGG - chr7_1:68578103-68578122 Msa1033450:intron 45.0%
TCCTCTGTCTTGCATAGCTA+GGG - chr7_1:68578104-68578123 Msa1033450:intron 45.0%
TGCATAGCTAGGGCTATGTT+TGG - chr7_1:68578114-68578133 Msa1033450:intron 45.0%
GCATAGCTAGGGCTATGTTT+GGG - chr7_1:68578115-68578134 Msa1033450:intron 45.0%
TAGGGCTATGTTTGGGAGTT+TGG - chr7_1:68578122-68578141 Msa1033450:intron 45.0%
GCTATGTTTGGGAGTTTGGT+GGG - chr7_1:68578126-68578145 Msa1033450:intron 45.0%
! TTTGGGAGTTTGGTGGGAAA+TGG - chr7_1:68578132-68578151 Msa1033450:intron 45.0%
AATGGGAAAAGGGAAGGAGA+AGG - chr7_1:68578179-68578198 Msa1033450:intron 45.0%
ATGGGAAAAGGGAAGGAGAA+GGG - chr7_1:68578180-68578199 Msa1033450:intron 45.0%
GGACTAAAACCCTCCGATAT+TGG - chr7_1:68578249-68578268 Msa1033450:intron 45.0%
!! GCATTAGGGAATAGCTTTGG+AGG - chr7_1:68578286-68578305 Msa1033450:intron 45.0%
GTTCCTACTAGTAGCTGTTC+TGG - chr7_1:68578994-68579013 Msa1033450:intron 45.0%
AGAATCATTTCTCAGGGTCG+AGG - chr7_1:68579130-68579149 Msa1033450:intron 45.0%
GCCTGTTGAAACTTCTTCAG+AGG - chr7_1:68579188-68579207 Msa1033450:intron 45.0%
CACTTCTTGCAGCGATATGT+AGG + chr7_1:68579249-68579268 None:intergenic 45.0%
GTAGATCATATTCCTGGGGA+GGG - chr7_1:68579300-68579319 Msa1033450:intron 45.0%
TCTTGTCACTCAGTTGAGGA+AGG - chr7_1:68579724-68579743 Msa1033450:intron 45.0%
! CCCGTTTGGGATACTTCAAT+TGG - chr7_1:68579785-68579804 Msa1033450:intron 45.0%
TTGGGATACTTCAATTGGGC+AGG - chr7_1:68579790-68579809 Msa1033450:intron 45.0%
GGTGCAACAAGACTTACATG+GGG + chr7_1:68579885-68579904 None:intergenic 45.0%
GTGGTGCAACAAGACTTACA+TGG + chr7_1:68579887-68579906 None:intergenic 45.0%
TCATTTGCAGTTGAGCAGCT+AGG + chr7_1:68579989-68580008 None:intergenic 45.0%
CATACCTGCTCAAGATTTCG+AGG - chr7_1:68580034-68580053 Msa1033450:intron 45.0%
TTAGCCTCGAAATCTTGAGC+AGG + chr7_1:68580041-68580060 None:intergenic 45.0%
! GTAAGGTTTGTTTGGTGGCT+AGG - chr7_1:68580443-68580462 Msa1033450:intron 45.0%
!! CTAATTTATTTATTAAATTT+AGG - chr7_1:68575912-68575931 Msa1033450:three_prime_UTR 5.0%
! TCTTCGTGTATGGGTTGCAC+AGG + chr7_1:68576099-68576118 None:intergenic 50.0%
TGGTCATGACCATGCCTAAG+AGG - chr7_1:68576232-68576251 Msa1033450:three_prime_UTR 50.0%
TCATGACCATGCCTAAGAGG+AGG - chr7_1:68576235-68576254 Msa1033450:three_prime_UTR 50.0%
TACCAACCACTCCTCCTCTT+AGG + chr7_1:68576249-68576268 None:intergenic 50.0%
TTGTCCGTAGTCTAAGAGGG+GGG + chr7_1:68576274-68576293 None:intergenic 50.0%
! GGCTTTGTCCGTAGTCTAAG+AGG + chr7_1:68576278-68576297 None:intergenic 50.0%
! GGTACGAGGGTTTAGGGTTT+AGG + chr7_1:68576322-68576341 None:intergenic 50.0%
GCGCTACGATTAAGGTACGA+GGG + chr7_1:68576335-68576354 None:intergenic 50.0%
TGCGCTACGATTAAGGTACG+AGG + chr7_1:68576336-68576355 None:intergenic 50.0%
GGTCAATTATACCGGGACGA+AGG + chr7_1:68576385-68576404 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - chr7_1:68576581-68576600 Msa1033450:intron 50.0%
!! TAACGATGCAAGGGCATCTG+CGG + chr7_1:68577237-68577256 None:intergenic 50.0%
CATGAGGTCCCACAACATGA+AGG + chr7_1:68577501-68577520 None:intergenic 50.0%
GGCTATGTTTGGGAGTTTGG+TGG - chr7_1:68578125-68578144 Msa1033450:intron 50.0%
! GGAGTTTGGTGGGAAATGGA+GGG - chr7_1:68578136-68578155 Msa1033450:intron 50.0%
! GAGTTTGGTGGGAAATGGAG+GGG - chr7_1:68578137-68578156 Msa1033450:intron 50.0%
! AGTTTGGTGGGAAATGGAGG+GGG - chr7_1:68578138-68578157 Msa1033450:intron 50.0%
! AAATGGAGGGGGGAGTTTTG+AGG - chr7_1:68578149-68578168 Msa1033450:intron 50.0%
GAGTTAGGAGGGAAACGAAG+GGG + chr7_1:68578471-68578490 None:intergenic 50.0%
GGAGTTAGGAGGGAAACGAA+GGG + chr7_1:68578472-68578491 None:intergenic 50.0%
GTTTAATGCCCTCCTTGTGG+TGG - chr7_1:68578815-68578834 Msa1033450:CDS 50.0%
ATGGGGAAGGCTGAGGTTAT+TGG - chr7_1:68578845-68578864 Msa1033450:CDS 50.0%
!! TCTAAGCTTGGTGCAGATCC+TGG - chr7_1:68579162-68579181 Msa1033450:intron 50.0%
GAAGTTTCAACAGGCATGCC+AGG + chr7_1:68579183-68579202 None:intergenic 50.0%
CGTAGATCATATTCCTGGGG+AGG - chr7_1:68579299-68579318 Msa1033450:intron 50.0%
CCATCTTTCATCCACCGTAG+AGG + chr7_1:68579414-68579433 None:intergenic 50.0%
CCTCTACGGTGGATGAAAGA+TGG - chr7_1:68579411-68579430 Msa1033450:intron 50.0%
TGCTCATTGTGATGCCCGTT+TGG - chr7_1:68579771-68579790 Msa1033450:intron 50.0%
GCTCATTGTGATGCCCGTTT+GGG - chr7_1:68579772-68579791 Msa1033450:intron 50.0%
TACAATGCAGCTGTGGAAGC+TGG - chr7_1:68579815-68579834 Msa1033450:intron 50.0%
ACCATGCCTAAGAGGAGGAG+TGG - chr7_1:68576240-68576259 Msa1033450:three_prime_UTR 55.0%
ACCACTCCTCCTCTTAGGCA+TGG + chr7_1:68576244-68576263 None:intergenic 55.0%
TGCCTAAGAGGAGGAGTGGT+TGG - chr7_1:68576244-68576263 Msa1033450:three_prime_UTR 55.0%
TACCCCCCCCTCTTAGACTA+CGG - chr7_1:68576267-68576286 Msa1033450:three_prime_UTR 55.0%
TGTCCGTAGTCTAAGAGGGG+GGG + chr7_1:68576273-68576292 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr7_1:68576585-68576604 Msa1033450:intron 55.0%
AAGAACTACTCCCTCCGTCC+CGG + chr7_1:68576598-68576617 None:intergenic 55.0%
GCCCTAGCTATGCAAGACAG+AGG + chr7_1:68578108-68578127 None:intergenic 55.0%
! GGGAGTTTGGTGGGAAATGG+AGG - chr7_1:68578135-68578154 Msa1033450:intron 55.0%
! GTTTGGTGGGAAATGGAGGG+GGG - chr7_1:68578139-68578158 Msa1033450:intron 55.0%
!! AAGGCTTTGGAGGGAATGGG+AGG + chr7_1:68578448-68578467 None:intergenic 55.0%
!! GGGAAGGCTTTGGAGGGAAT+GGG + chr7_1:68578451-68578470 None:intergenic 55.0%
!! ACGAAGGGGAAGGCTTTGGA+GGG + chr7_1:68578457-68578476 None:intergenic 55.0%
! AACGAAGGGGAAGGCTTTGG+AGG + chr7_1:68578458-68578477 None:intergenic 55.0%
GGAAACGAAGGGGAAGGCTT+TGG + chr7_1:68578461-68578480 None:intergenic 55.0%
TAGGAGGGAAACGAAGGGGA+AGG + chr7_1:68578467-68578486 None:intergenic 55.0%
GGGAGTTAGGAGGGAAACGA+AGG + chr7_1:68578473-68578492 None:intergenic 55.0%
TCCCTCAACCACCACAAGGA+GGG + chr7_1:68578826-68578845 None:intergenic 55.0%
ATCCCTCAACCACCACAAGG+AGG + chr7_1:68578827-68578846 None:intergenic 55.0%
TCCTTGTGGTGGTTGAGGGA+TGG - chr7_1:68578826-68578845 Msa1033450:CDS 55.0%
CCTTGTGGTGGTTGAGGGAT+GGG - chr7_1:68578827-68578846 Msa1033450:CDS 55.0%
CTTGTGGTGGTTGAGGGATG+GGG - chr7_1:68578828-68578847 Msa1033450:CDS 55.0%
AGGGTGAGACATCCTTTGGC+TGG - chr7_1:68579319-68579338 Msa1033450:intron 55.0%
CATCCTTTGGCTGGCACAAG+CGG - chr7_1:68579328-68579347 Msa1033450:intron 55.0%
TTTCCGCTTGTGCCAGCCAA+AGG + chr7_1:68579334-68579353 None:intergenic 55.0%
ACGGGCATCACAATGAGCAC+AGG + chr7_1:68579770-68579789 None:intergenic 55.0%
GCAGGCATACAATGCAGCTG+TGG - chr7_1:68579808-68579827 Msa1033450:intron 55.0%
GTCCGTAGTCTAAGAGGGGG+GGG + chr7_1:68576272-68576291 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG - chr7_1:68576584-68576603 Msa1033450:intron 60.0%
!! GGGGAAGGCTTTGGAGGGAA+TGG + chr7_1:68578452-68578471 None:intergenic 60.0%
TGCCCTCCTTGTGGTGGTTG+AGG - chr7_1:68578821-68578840 Msa1033450:CDS 60.0%
GCCCTCCTTGTGGTGGTTGA+GGG - chr7_1:68578822-68578841 Msa1033450:CDS 60.0%
CCCATCCCTCAACCACCACA+AGG + chr7_1:68578830-68578849 None:intergenic 60.0%
TGGTGGTTGAGGGATGGGGA+AGG - chr7_1:68578832-68578851 Msa1033450:CDS 60.0%
TTGAGGGATGGGGAAGGCTG+AGG - chr7_1:68578838-68578857 Msa1033450:CDS 60.0%
AAGGATGTCTCACCCTCCCC+AGG + chr7_1:68579315-68579334 None:intergenic 60.0%
GGGGAGGGTGAGACATCCTT+TGG - chr7_1:68579315-68579334 Msa1033450:intron 60.0%
GGCTGGCACAAGCGGAAAAG+TGG - chr7_1:68579336-68579355 Msa1033450:intron 60.0%
! CTCAGTTGAGGAAGGCGCGT+TGG - chr7_1:68579732-68579751 Msa1033450:intron 60.0%
! AGTTGAGGAAGGCGCGTTGG+AGG - chr7_1:68579735-68579754 Msa1033450:intron 60.0%
! GTTGAGGAAGGCGCGTTGGA+GGG - chr7_1:68579736-68579755 Msa1033450:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 68575706 68580571 68575706 ID=Msa1033450;Name=Msa1033450
chr7_1 mRNA 68575706 68580571 68575706 ID=Msa1033450-mRNA-1;Parent=Msa1033450;Name=Msa1033450-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.33|0.25|0.75|0.66|0.75|4|680|194
chr7_1 exon 68575706 68576540 68575706 ID=Msa1033450-mRNA-1:exon:16034;Parent=Msa1033450-mRNA-1
chr7_1 exon 68576845 68577150 68576845 ID=Msa1033450-mRNA-1:exon:16033;Parent=Msa1033450-mRNA-1
chr7_1 exon 68578803 68578881 68578803 ID=Msa1033450-mRNA-1:exon:16032;Parent=Msa1033450-mRNA-1
chr7_1 exon 68580527 68580571 68580527 ID=Msa1033450-mRNA-1:exon:16031;Parent=Msa1033450-mRNA-1
chr7_1 CDS 68580527 68580571 68580527 ID=Msa1033450-mRNA-1:cds;Parent=Msa1033450-mRNA-1
chr7_1 CDS 68578803 68578881 68578803 ID=Msa1033450-mRNA-1:cds;Parent=Msa1033450-mRNA-1
chr7_1 CDS 68576845 68577150 68576845 ID=Msa1033450-mRNA-1:cds;Parent=Msa1033450-mRNA-1
chr7_1 CDS 68576386 68576540 68576386 ID=Msa1033450-mRNA-1:cds;Parent=Msa1033450-mRNA-1
chr7_1 three_prime_UTR 68575706 68576385 68575706 ID=Msa1033450-mRNA-1:three_prime_utr;Parent=Msa1033450-mRNA-1
Gene Sequence

>Msa1033450

ATGGGTTGGTCCTCACCAAAAATAACTATAGATATTGCATACGAGTTGAAAATGTTTGAGGAGATGGGTTTCAAGGTTGATCAATCTAGCCCTGTATACAAGCGCTTTCGTCTAAAAATACTAGGTGAGAATCATTTCTCAGGGTCGAGGATAGACAGTTCTAAGCTTGGTGCAGATCCTGGCATGCCTGTTGAAACTTCTTCAGAGGTGGGAGAAGCTACTAAAGTAGAAAATAATCGTAGTCCTACATATCGCTGCAAGAAGTGCCGTCGTATTGTTGCATTGCAAGAACATGTCGTAGATCATATTCCTGGGGAGGGTGAGACATCCTTTGGCTGGCACAAGCGGAAAAGTGGCAATCCTTTTAACAAGTCTAATGAATCTGAGTGTTCGTCCATATTTATTGAGCCTCTACGGTGGATGAAAGATGTTGAGGAAGGCGCGTTGGAGGGAAAACTGTCCTGTGCTCATTGTGATGCCCGTTTGGGATACTTCAATTGGGCAGGCATACAATGCAGCTGTGGAAGCTGGATAACACCAGCTTTTCAACTACACAAAAGTCGGGTAGATATAAGCCCCATGTAA
Protein sequence

>Msa1033450

MGWSSPKITIDIAYELKMFEEMGFKVDQSSPVYKRFRLKILGENHFSGSRIDSSKLGADPGMPVETSSEVGEATKVENNRSPTYRCKKCRRIVALQEHVVDHIPGEGETSFGWHKRKSGNPFNKSNESECSSIFIEPLRWMKDVEEGALEGKLSCAHCDARLGYFNWAGIQCSCGSWITPAFQLHKSRVDISPM*