AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1101610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1101610 MtrunA17_Chr3g0120791 97.599 708 17 0 1 708 1 708 0.0 1422
Msa1101610 MtrunA17_Chr3g0129101 46.281 605 284 9 138 708 143 740 0.0 538
Msa1101610 MtrunA17_Chr8g0382921 43.964 671 325 11 72 708 78 731 0.0 538
Msa1101610 MtrunA17_Chr3g0136721 37.692 390 226 4 198 575 132 516 7.81e-79 266
Msa1101610 MtrunA17_Chr4g0012061 35.128 390 240 5 197 580 148 530 1.16e-69 241
Msa1101610 MtrunA17_Chr6g0465161 35.904 376 228 4 201 575 129 492 1.22e-67 236
Msa1101610 MtrunA17_Chr7g0230671 30.196 510 333 8 73 580 30 518 7.99e-67 233
Msa1101610 MtrunA17_Chr1g0169361 33.638 437 264 8 150 580 142 558 6.97e-64 226
Msa1101610 MtrunA17_Chr1g0148121 34.109 387 241 5 201 580 131 510 5.90e-59 211
Msa1101610 MtrunA17_Chr1g0199921 29.481 424 283 4 204 614 203 623 1.10e-50 189
Msa1101610 MtrunA17_Chr1g0147481 26.503 449 285 9 168 580 86 525 2.27e-43 168
Msa1101610 MtrunA17_Chr8g0360981 31.003 329 191 8 198 497 203 524 1.82e-38 151
Msa1101610 MtrunA17_Chr5g0433911 30.072 276 178 5 215 483 77 344 1.19e-37 147
Msa1101610 MtrunA17_Chr3g0113361 27.073 410 261 8 185 563 69 471 2.54e-37 147
Msa1101610 MtrunA17_Chr4g0057941 26.782 463 265 14 154 580 26 450 1.51e-36 143
Msa1101610 MtrunA17_Chr4g0048521 29.909 331 200 8 203 506 217 542 7.66e-35 140
Msa1101610 MtrunA17_Chr5g0428451 25.126 398 263 6 203 570 127 519 9.91e-33 133
Msa1101610 MtrunA17_Chr2g0281061 29.206 315 194 7 203 493 214 523 3.18e-32 132
Msa1101610 MtrunA17_Chr1g0193751 28.947 304 192 8 199 492 225 514 4.30e-22 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1101610 AT3G07700.1 74.370 714 158 9 1 708 1 695 0.0 1079
Msa1101610 AT3G07700.2 74.370 714 158 9 1 708 1 695 0.0 1079
Msa1101610 AT3G07700.4 74.370 714 158 9 1 708 1 695 0.0 1079
Msa1101610 AT3G07700.3 71.467 743 158 10 1 708 1 724 0.0 1064
Msa1101610 AT5G64940.1 45.634 607 287 8 138 708 158 757 4.58e-179 530
Msa1101610 AT5G64940.2 45.634 607 287 8 138 708 158 757 4.58e-179 530
Msa1101610 AT5G24970.3 35.088 399 231 4 198 575 134 525 6.21e-73 251
Msa1101610 AT5G24970.2 35.088 399 231 4 198 575 173 564 2.20e-72 250
Msa1101610 AT1G79600.1 34.815 405 251 5 186 580 124 525 6.11e-70 242
Msa1101610 AT1G71810.1 36.170 376 227 4 201 575 120 483 2.17e-69 240
Msa1101610 AT5G24970.1 34.336 399 231 5 198 575 134 522 1.26e-68 239
Msa1101610 AT3G24190.1 34.430 395 244 6 189 580 184 566 2.00e-61 220
Msa1101610 AT4G31390.1 33.333 387 244 5 201 580 167 546 6.41e-57 206
Msa1101610 AT2G39190.2 30.380 395 252 4 204 580 202 591 9.08e-51 190
Msa1101610 AT4G31390.3 32.768 354 224 5 234 580 1 347 1.69e-48 178
Msa1101610 AT4G31390.2 31.266 387 227 6 201 580 167 521 4.12e-47 177
Msa1101610 AT4G24810.2 27.766 461 302 10 146 589 15 461 2.88e-42 160
Msa1101610 AT5G50330.1 28.761 452 286 10 152 580 14 452 7.83e-42 159
Msa1101610 AT5G24810.1 27.706 462 280 11 168 588 60 508 6.09e-41 161
Msa1101610 AT4G24810.6 29.008 393 259 7 211 589 32 418 8.32e-41 155
Msa1101610 AT4G24810.1 29.008 393 259 7 211 589 32 418 8.32e-41 155
Msa1101610 AT1G65950.2 30.657 274 177 6 215 482 113 379 3.91e-39 151
Msa1101610 AT4G24810.3 28.750 400 258 8 211 589 32 425 6.89e-39 150
Msa1101610 AT1G65950.1 30.657 274 177 6 215 482 113 379 2.53e-38 150
Msa1101610 AT4G24810.4 31.724 290 179 6 211 486 32 316 1.55e-37 143
Msa1101610 AT5G24810.2 26.369 493 278 13 168 588 60 539 4.46e-37 149
Msa1101610 AT4G24810.5 33.209 268 160 6 211 464 32 294 1.52e-36 140
Msa1101610 AT5G50330.2 26.829 451 280 10 152 580 14 436 5.36e-34 136
Msa1101610 AT5G05200.1 24.879 414 276 6 186 570 113 520 5.41e-34 137
Msa1101610 AT2G40090.1 28.617 311 200 5 199 491 87 393 1.78e-32 133
Msa1101610 AT1G11390.1 28.125 352 216 9 187 508 198 542 7.35e-32 132
Msa1101610 AT1G61640.3 28.267 329 202 10 204 506 213 533 1.21e-28 122
Msa1101610 AT1G61640.1 28.267 329 202 10 204 506 213 533 1.39e-28 122
Msa1101610 AT2G39190.1 36.250 160 99 1 204 363 202 358 1.59e-22 100
Msa1101610 AT4G01660.1 27.778 306 211 5 198 501 222 519 3.60e-22 102
Msa1101610 AT1G61640.2 30.049 203 124 6 204 394 213 409 6.59e-18 87.8

Find 181 sgRNAs with CRISPR-Local

Find 411 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCCTTGTAGCTGGTTTAT+TGG 0.177430 7_3:+32381712 Msa1101610:intron
CTCTTTAAACAATTCATTAA+TGG 0.177743 7_3:-32380588 None:intergenic
CATTTATATAATCAATTTCT+TGG 0.199717 7_3:-32381445 None:intergenic
AGCCATTATTACTGCCATTT+AGG 0.200934 7_3:-32379515 None:intergenic
TACAGGAACTTCTAGATATA+AGG 0.236116 7_3:+32383957 Msa1101610:intron
GGAGGAACCTTTCTAAATAT+TGG 0.238190 7_3:+32384530 Msa1101610:CDS
ATAGGTATCATTACCCTAAA+TGG 0.241840 7_3:+32379501 Msa1101610:intron
GGCTTTATTGAGAGTGAATT+AGG 0.254061 7_3:+32380560 Msa1101610:CDS
ACCCTTGTAGCTGGTTTATT+GGG 0.269755 7_3:+32381713 Msa1101610:intron
GCCATTATTACTGCCATTTA+GGG 0.276747 7_3:-32379514 None:intergenic
GGCTCAAAGCAAGCTGTTAA+TGG 0.283062 7_3:+32379823 Msa1101610:CDS
GTCCTCCTAGTGGGTCCTTT+TGG 0.288341 7_3:+32378663 Msa1101610:five_prime_UTR
ATTCAATGCCTTATTGATCT+TGG 0.300157 7_3:+32382696 Msa1101610:CDS
TATTGAGGCGTACTTGATTC+AGG 0.305517 7_3:+32381994 Msa1101610:CDS
AAGAAAATGTCATTGTTTAG+AGG 0.325510 7_3:+32384949 Msa1101610:three_prime_UTR
GAAATGCCGCCATCAAAATT+AGG 0.325630 7_3:+32379712 Msa1101610:CDS
CCACATTACCACAGTAGTTA+TGG 0.329310 7_3:+32385031 Msa1101610:three_prime_UTR
ACCCTAAATGGCAGTAATAA+TGG 0.329958 7_3:+32379513 Msa1101610:exon
TCTTTAAACAATTCATTAAT+GGG 0.331071 7_3:-32380587 None:intergenic
GCTACTATGTACACGGTATT+AGG 0.336158 7_3:+32384509 Msa1101610:CDS
ATCCAAGTGCTGGTAATGTT+TGG 0.338580 7_3:-32385083 None:intergenic
AGCTGTTAATGGAGCAAGTT+TGG 0.341642 7_3:+32379834 Msa1101610:CDS
CAATGCAAAATGGGCATATC+CGG 0.342054 7_3:+32380053 Msa1101610:CDS
GAGCAGACATTGTCTGCAAT+TGG 0.346799 7_3:+32382910 Msa1101610:CDS
TTCGTTGTCTTTGTCAATGC+TGG 0.352992 7_3:-32379874 None:intergenic
TTTCATATACAATAAGGAAT+TGG 0.380190 7_3:-32384810 None:intergenic
CCAATGAAAATTACAGTTCC+TGG 0.383016 7_3:+32379971 Msa1101610:CDS
TTCAAGTGGTGGAAGTTCAT+TGG 0.384033 7_3:-32379908 None:intergenic
TCCAAGTGCTGGTAATGTTT+GGG 0.384889 7_3:-32385082 None:intergenic
TAATGGTAGAGCTGTTAAAA+TGG 0.385147 7_3:+32379738 Msa1101610:CDS
TCAATTATTTATTACGACTT+TGG 0.385780 7_3:+32382188 Msa1101610:CDS
CCATCAAAATTAGGTAATAA+TGG 0.389209 7_3:+32379721 Msa1101610:CDS
TAAGGAATTGGATATTTGTT+GGG 0.389619 7_3:-32384798 None:intergenic
TACGGTATAAACACGACAAA+AGG 0.394062 7_3:-32378544 None:intergenic
TTTGGCATCCTTCTCATAAA+CGG 0.395475 7_3:-32382267 None:intergenic
ACAGATCCCCGGTGGGTTGG+AGG 0.397963 7_3:-32382722 None:intergenic
AGCAGACATTGTCTGCAATT+GGG 0.399926 7_3:+32382911 Msa1101610:CDS
TCTATTTCCCCGTGAATTTG+TGG 0.401899 7_3:+32380364 Msa1101610:CDS
ATCTTCACAAATGAGAAATC+TGG 0.404363 7_3:-32383836 None:intergenic
TTTCAGAGAAGTGAAACTTT+TGG 0.408412 7_3:+32381189 Msa1101610:CDS
ATAAGGAATTGGATATTTGT+TGG 0.411963 7_3:-32384799 None:intergenic
TTGGTGGTCCAACTAGAGAT+TGG 0.412828 7_3:+32381208 Msa1101610:CDS
ATAACAAAGGTGAAGGTTGA+TGG 0.416877 7_3:-32383066 None:intergenic
CGAAGATCACTAGACAATCT+TGG 0.421184 7_3:+32379580 Msa1101610:CDS
CCGAGACTTGCAGCAGCAAT+TGG 0.421258 7_3:-32380623 None:intergenic
ACATCAATAGCAAGATTTCC+AGG 0.425680 7_3:-32382158 None:intergenic
GGAAGTTCATTGGAGATTGT+AGG 0.432975 7_3:-32379898 None:intergenic
GACAATGTCTGCTCTTGATC+TGG 0.434915 7_3:-32382901 None:intergenic
ATTGACACCAATATTTAGAA+AGG 0.438522 7_3:-32384537 None:intergenic
TAGCACAAGACCAGCCATTC+CGG 0.440262 7_3:+32383040 Msa1101610:CDS
TTTCACGCTGATCCACATCC+TGG 0.442896 7_3:+32382140 Msa1101610:CDS
TTGCAAAAGTTTGATTGCCT+TGG 0.444011 7_3:-32384568 None:intergenic
GAAGGAGGAAAACGGCTTCA+TGG 0.444251 7_3:+32380270 Msa1101610:CDS
TGTCCAAGTTTAATAAAAGT+TGG 0.444282 7_3:-32380320 None:intergenic
TCTATTCTTTGAACTCTCAA+TGG 0.445983 7_3:-32384207 None:intergenic
GAAATTGATTATATAAATGA+AGG 0.452977 7_3:+32381449 Msa1101610:CDS
TTATGAGAAGGATGCCAAAA+AGG 0.452978 7_3:+32382271 Msa1101610:CDS
AGGTGAAGGTTGATGGAAAC+CGG 0.458214 7_3:-32383059 None:intergenic
GGAGGGCTCCAAGATCAATA+AGG 0.466597 7_3:-32382704 None:intergenic
TATTACGACTTTGGCATGAT+GGG 0.468315 7_3:+32382197 Msa1101610:CDS
CCAATTGCTGCTGCAAGTCT+CGG 0.469478 7_3:+32380623 Msa1101610:CDS
GGATGAACTCGCAAAATTGC+AGG 0.471584 7_3:+32380385 Msa1101610:CDS
TGCTGCTGCAAGTCTCGGTC+AGG 0.471750 7_3:+32380628 Msa1101610:CDS
CCACAGGGCCACAACTCGTC+GGG 0.471887 7_3:+32383990 Msa1101610:CDS
GTGTTACAGATATTGAAAAC+AGG 0.473505 7_3:+32382113 Msa1101610:intron
CCTCAGATGAAGGCTTCAGT+TGG 0.474873 7_3:+32379947 Msa1101610:CDS
TTGGGATTATACAGCAATGA+AGG 0.474937 7_3:+32381731 Msa1101610:CDS
TCTTGCTTCCACGTTACAAA+AGG 0.479209 7_3:-32378638 None:intergenic
CGAGTTCATCCACAAATTCA+CGG 0.480904 7_3:-32380373 None:intergenic
TTTGCAAATGGATCGTTTGT+TGG 0.485361 7_3:+32384584 Msa1101610:CDS
TCTGCTCTTGATCTGGTGAC+TGG 0.488384 7_3:-32382894 None:intergenic
AGAAAATGTCATTGTTTAGA+GGG 0.490479 7_3:+32384950 Msa1101610:three_prime_UTR
CAGATCCCCGGTGGGTTGGA+GGG 0.491136 7_3:-32382721 None:intergenic
ATTCTTACGGTCTATGCAAA+GGG 0.493150 7_3:+32384734 Msa1101610:CDS
TTTGTGAAGCAAGTTGAGGC+AGG 0.494683 7_3:+32384234 Msa1101610:CDS
GTTATCAAAGTTCAAAGGCC+TGG 0.495296 7_3:+32380686 Msa1101610:CDS
GGAAAACGGCTTCATGGCTA+AGG 0.498904 7_3:+32380276 Msa1101610:CDS
GATAAGCAGAAGGAGGAAAA+CGG 0.502499 7_3:+32380262 Msa1101610:intron
TAAAGCCTCTTGCTTTCTGT+GGG 0.502807 7_3:-32380544 None:intergenic
GCTATCTGCCCGACGAGTTG+TGG 0.508655 7_3:-32383998 None:intergenic
TTGATGGAAACCGGAATGGC+TGG 0.509916 7_3:-32383050 None:intergenic
TCCCAAACATTACCAGCACT+TGG 0.511999 7_3:+32385081 Msa1101610:three_prime_UTR
TTAAATTATGCAAGAGTACA+AGG 0.512450 7_3:-32385058 None:intergenic
ATGAAGGGAAGAATGCTGAT+AGG 0.512805 7_3:+32381465 Msa1101610:CDS
CTGACAGATCCCCGGTGGGT+TGG 0.513021 7_3:-32382725 None:intergenic
TGGTAAATTTCGTAGATTTG+TGG 0.513813 7_3:+32379672 Msa1101610:CDS
CTTGGAGCCCTCCAACCCAC+CGG 0.514456 7_3:+32382714 Msa1101610:CDS
ACAGTCTGAACCTGTGCATA+GGG 0.514489 7_3:-32383866 None:intergenic
AATCTCATCACGTGCTATTG+AGG 0.516579 7_3:+32381979 Msa1101610:CDS
TTGGAGCCCTCCAACCCACC+GGG 0.517854 7_3:+32382715 Msa1101610:CDS
AATGGATCGTTTGTTGGTGC+AGG 0.519200 7_3:+32384590 Msa1101610:CDS
GCTTTCTGTGGGGAGAAAGC+AGG 0.519217 7_3:-32380533 None:intergenic
CCGACGAGTTGTGGCCCTGT+GGG 0.519502 7_3:-32383989 None:intergenic
ATAGCAAGATTTCCAGGATG+TGG 0.519629 7_3:-32382152 None:intergenic
GGCAGAGATCAATTGATGTA+TGG 0.520886 7_3:+32379992 Msa1101610:CDS
GTCTCCACTTTATTCTCTGA+CGG 0.521771 7_3:-32379793 None:intergenic
ATTGAGAGTTCAAAGAATAG+AGG 0.523885 7_3:+32384209 Msa1101610:CDS
CTCAGATGAAGGCTTCAGTT+GGG 0.526088 7_3:+32379948 Msa1101610:CDS
ATACCGATCCAATCTCTAGT+TGG 0.528498 7_3:-32381216 None:intergenic
TTATTGTAACAATATAGAAT+CGG 0.529878 7_3:+32379549 Msa1101610:CDS
GAGTTCATCCACAAATTCAC+GGG 0.530269 7_3:-32380372 None:intergenic
TTATTACGACTTTGGCATGA+TGG 0.530731 7_3:+32382196 Msa1101610:CDS
TAAATTTCGTAGATTTGTGG+TGG 0.532222 7_3:+32379675 Msa1101610:CDS
TTGACCTTGGAGTATGTACC+AGG 0.532309 7_3:+32381756 Msa1101610:CDS
GCAGACATTGTCTGCAATTG+GGG 0.533585 7_3:+32382912 Msa1101610:CDS
GTCTTTGTCAATGCTGGAGT+AGG 0.534650 7_3:-32379868 None:intergenic
ATAAAGCCTCTTGCTTTCTG+TGG 0.536314 7_3:-32380545 None:intergenic
AACTCTCAATGGCATTGACA+TGG 0.538554 7_3:-32384196 None:intergenic
ACGGTATAAACACGACAAAA+GGG 0.539286 7_3:-32378543 None:intergenic
GGTGTCAATTTGACTAGCCA+AGG 0.544223 7_3:+32384551 Msa1101610:CDS
AATGACAGACACCCTCCAAA+AGG 0.546419 7_3:-32378678 None:intergenic
TTCTCCCCACAGAAAGCAAG+AGG 0.547830 7_3:+32380539 Msa1101610:CDS
TGCTCTAATAACAAAGGTGA+AGG 0.550545 7_3:-32383073 None:intergenic
AATAAAGTGGAGACAGTCAA+TGG 0.556563 7_3:+32379802 Msa1101610:CDS
AGCAATGAAGGTGTTGACCT+TGG 0.557273 7_3:+32381743 Msa1101610:CDS
CCAACTGAAGCCTTCATCTG+AGG 0.557528 7_3:-32379947 None:intergenic
ATAAATTGTCAAAGAATGAA+AGG 0.558325 7_3:+32379626 Msa1101610:CDS
CAACTGAAGCCTTCATCTGA+GGG 0.559152 7_3:-32379946 None:intergenic
AATGCAAAATGGGCATATCC+GGG 0.559374 7_3:+32380054 Msa1101610:CDS
TATTCTTACGGTCTATGCAA+AGG 0.560981 7_3:+32384733 Msa1101610:CDS
GACACCGTCAGAGAATAAAG+TGG 0.563292 7_3:+32379789 Msa1101610:CDS
GAAAGCGACAGTGTTACAAA+TGG 0.563568 7_3:+32384487 Msa1101610:CDS
GACAGTCTGAACCTGTGCAT+AGG 0.566917 7_3:-32383867 None:intergenic
CAGTTCGAGCAATCTCTCAC+GGG 0.571404 7_3:-32382237 None:intergenic
ATTACGACTTTGGCATGATG+GGG 0.574785 7_3:+32382198 Msa1101610:CDS
GCACTGCAAGATCCAAGTGC+TGG 0.577661 7_3:-32385093 None:intergenic
TAGAGCTGTTAAAATGGTAC+CGG 0.578175 7_3:+32379744 Msa1101610:CDS
TACATCAATTGATCTCTGCC+AGG 0.581512 7_3:-32379989 None:intergenic
AGGTATTAAAATAAATCAAG+TGG 0.581716 7_3:+32381922 Msa1101610:intron
ACAAAAGGTGTAAGAACAAG+TGG 0.584929 7_3:-32378623 None:intergenic
CCATAACTACTGTGGTAATG+TGG 0.585094 7_3:-32385031 None:intergenic
TGGCTTCACAGAAGAAAAGC+AGG 0.586577 7_3:+32380077 Msa1101610:CDS
CAAGTGGTTGAACTTGAACA+TGG 0.587413 7_3:-32378607 None:intergenic
ATAAGGCAACGACAGCCCAC+AGG 0.588619 7_3:+32383974 Msa1101610:CDS
AGCAAGAACGTCCTCCTAGT+GGG 0.590428 7_3:+32378654 Msa1101610:five_prime_UTR
ACAGTTCGAGCAATCTCTCA+CGG 0.590615 7_3:-32382238 None:intergenic
CCCACAGGGCCACAACTCGT+CGG 0.591725 7_3:+32383989 Msa1101610:CDS
GATTGCTGCACCCTATGCAC+AGG 0.591848 7_3:+32383856 Msa1101610:CDS
TCTAGTCTGAAAGAGCTGCT+CGG 0.594593 7_3:+32384465 Msa1101610:intron
GTGGATACATTGACTTCTCG+TGG 0.595263 7_3:+32381941 Msa1101610:CDS
ACTATGTACACGGTATTAGG+AGG 0.601581 7_3:+32384512 Msa1101610:CDS
GTATAGCTTATATGTGTAAG+CGG 0.602317 7_3:-32384859 None:intergenic
CCCGACGAGTTGTGGCCCTG+TGG 0.603360 7_3:-32383990 None:intergenic
TGTTTAAAGAGTTTGAAGAT+CGG 0.606621 7_3:+32380600 Msa1101610:CDS
AAGTAGTTATCAAAGTTCAA+AGG 0.613460 7_3:+32380681 Msa1101610:CDS
AGGGAATCTGTATTACAGCT+CGG 0.617183 7_3:+32380296 Msa1101610:CDS
AGAAAATGCTCTAATAACAA+AGG 0.622886 7_3:-32383079 None:intergenic
CCTTACAGCTGACAGATCCC+CGG 0.625234 7_3:-32382733 None:intergenic
TACAGCTGACAGATCCCCGG+TGG 0.626173 7_3:-32382730 None:intergenic
AAATTGATTATATAAATGAA+GGG 0.628702 7_3:+32381450 Msa1101610:CDS
CTCCAAAAGGACCCACTAGG+AGG 0.629197 7_3:-32378665 None:intergenic
CTACCTCTAGTACTCGAACT+CGG 0.632492 7_3:-32384269 None:intergenic
GAAAGAAACATACAGGTACT+CGG 0.633321 7_3:-32381520 None:intergenic
TTGCAGGGTGTTGACACTGT+AGG 0.636866 7_3:+32384904 Msa1101610:three_prime_UTR
ACATCTGATAAGTTAAAGAG+TGG 0.637198 7_3:+32379652 Msa1101610:CDS
TTACGACTTTGGCATGATGG+GGG 0.641403 7_3:+32382199 Msa1101610:CDS
ATAACCTGGTACATACTCCA+AGG 0.642881 7_3:-32381760 None:intergenic
ACTCCGAGTTCGAGTACTAG+AGG 0.643048 7_3:+32384266 Msa1101610:CDS
GACATTGTCTGCAATTGGGG+AGG 0.644164 7_3:+32382915 Msa1101610:CDS
AAGCAAGAACGTCCTCCTAG+TGG 0.646163 7_3:+32378653 Msa1101610:five_prime_UTR
TTGCATTGTCGAAAAGAACA+CGG 0.647652 7_3:-32380038 None:intergenic
ACAAATGGCTACTATGTACA+CGG 0.650955 7_3:+32384502 Msa1101610:CDS
GAAAACGGCTTCATGGCTAA+GGG 0.653245 7_3:+32380277 Msa1101610:CDS
ACCCTCCAAAAGGACCCACT+AGG 0.662138 7_3:-32378668 None:intergenic
GGAGTTTGTGAAGCAAGTTG+AGG 0.666870 7_3:+32384230 Msa1101610:CDS
AAGGTAGAAACATACCAGGA+GGG 0.668694 7_3:-32378705 None:intergenic
GCAGTAATAATGGCTTTGCA+TGG 0.669620 7_3:+32379523 Msa1101610:CDS
AAGGTTGATGGAAACCGGAA+TGG 0.675520 7_3:-32383054 None:intergenic
AGAAAACTTAAAGCTGATCG+CGG 0.679693 7_3:+32381161 Msa1101610:intron
GACACGTAAAGAAAGAACAA+AGG 0.679744 7_3:-32380016 None:intergenic
TAAGGCAACGACAGCCCACA+GGG 0.682134 7_3:+32383975 Msa1101610:CDS
GGTCCAACTAGAGATTGGAT+CGG 0.683709 7_3:+32381213 Msa1101610:CDS
ACAGCTGACAGATCCCCGGT+GGG 0.686035 7_3:-32382729 None:intergenic
CATCGTGCAATTCTGCACAA+TGG 0.686650 7_3:+32380653 Msa1101610:CDS
AAGGAAAGCCATAACTACTG+TGG 0.689938 7_3:-32385039 None:intergenic
AAAGCCTCTTGCTTTCTGTG+GGG 0.714944 7_3:-32380543 None:intergenic
TGGAGCCCTCCAACCCACCG+GGG 0.715980 7_3:+32382716 Msa1101610:CDS
GCAAAATGGGCATATCCGGG+TGG 0.723451 7_3:+32380057 Msa1101610:CDS
TTGGACAGTTATCATCAACA+AGG 0.723832 7_3:+32380336 Msa1101610:CDS
TTATGTTTCGAAAATCACGA+CGG 0.732189 7_3:-32381490 None:intergenic
AGTTCATCCACAAATTCACG+GGG 0.744511 7_3:-32380371 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCATCAAATTATTAAAA+GGG - chr7_3:32378818-32378837 None:intergenic 10.0%
!! AATTTCATCAAATTATTAAA+AGG - chr7_3:32378819-32378838 None:intergenic 10.0%
!!! TTTCTTTTAATAAATCAATT+AGG + chr7_3:32380185-32380204 Msa1101610:intron 10.0%
!! AAATTGATTATATAAATGAA+GGG + chr7_3:32381450-32381469 Msa1101610:CDS 10.0%
!! AAACAATACAAATATTTAAA+AGG - chr7_3:32381559-32381578 None:intergenic 10.0%
!!! AATATTTTTCATATACAATA+AGG - chr7_3:32384819-32384838 None:intergenic 10.0%
!!! GTTTTATTTTTAATGTGTTA+CGG - chr7_3:32378565-32378584 None:intergenic 15.0%
!!! TTATTGATTTTGTTAATGTT+TGG - chr7_3:32378587-32378606 None:intergenic 15.0%
!! TTTCATCAAATTATTAAAAG+GGG - chr7_3:32378817-32378836 None:intergenic 15.0%
!! GAAAATCAATCAATATAATT+TGG - chr7_3:32379179-32379198 None:intergenic 15.0%
!! ATAAGAGAAATAAATTGTAA+AGG - chr7_3:32379463-32379482 None:intergenic 15.0%
!!! TGTTCATATTGATTTTTTAT+AGG + chr7_3:32379483-32379502 Msa1101610:intron 15.0%
!! TTATTGTAACAATATAGAAT+CGG + chr7_3:32379549-32379568 Msa1101610:CDS 15.0%
!! TTTATTTAGTGTATTAAACT+TGG + chr7_3:32380456-32380475 Msa1101610:intron 15.0%
!! TCTTTAAACAATTCATTAAT+GGG - chr7_3:32380590-32380609 None:intergenic 15.0%
!! CATTTATATAATCAATTTCT+TGG - chr7_3:32381448-32381467 None:intergenic 15.0%
!! GAAATTGATTATATAAATGA+AGG + chr7_3:32381449-32381468 Msa1101610:CDS 15.0%
!!! CTTTAATTTTAAAGAAAACA+AGG - chr7_3:32381806-32381825 None:intergenic 15.0%
!!! TTATTTGATTTTTTTTTTCC+CGG + chr7_3:32381895-32381914 Msa1101610:intron 15.0%
!! CTAATTATCTATTCTAATAA+AGG + chr7_3:32382530-32382549 Msa1101610:intron 15.0%
!! AAATTTATAAGATAGAGATA+TGG - chr7_3:32382816-32382835 None:intergenic 15.0%
!!! AATTTCATAATTTGATTTTC+AGG + chr7_3:32382831-32382850 Msa1101610:intron 15.0%
!!! ACTTGAATATTTAATTCTTT+TGG + chr7_3:32382939-32382958 Msa1101610:intron 15.0%
!!! TTATTATTGATGGAATTTTT+TGG + chr7_3:32383001-32383020 Msa1101610:intron 15.0%
!! AAGAAACAAATAAGAAAATA+GGG - chr7_3:32383327-32383346 None:intergenic 15.0%
!! AAAGAAACAAATAAGAAAAT+AGG - chr7_3:32383328-32383347 None:intergenic 15.0%
!!! TTCAACTTATTTTTTCTTAT+TGG + chr7_3:32384423-32384442 Msa1101610:intron 15.0%
!! TGAACATGATAAAAAATATT+TGG - chr7_3:32384643-32384662 None:intergenic 15.0%
!! AACGTATTAACATATTCAAA+TGG - chr7_3:32379133-32379152 None:intergenic 20.0%
!!! TGAATATGTTAATACGTTTT+TGG + chr7_3:32379135-32379154 Msa1101610:intron 20.0%
!!! ATTTTACAAGATATAACAAC+CGG - chr7_3:32379315-32379334 None:intergenic 20.0%
!! ATAAATTGTCAAAGAATGAA+AGG + chr7_3:32379626-32379645 Msa1101610:CDS 20.0%
!! CTCTTTAAACAATTCATTAA+TGG - chr7_3:32380591-32380610 None:intergenic 20.0%
!!! ATATATGATTAATTTTGCTG+AGG - chr7_3:32380856-32380875 None:intergenic 20.0%
!!! ACAACTAAGTTTTATATACA+TGG + chr7_3:32380989-32381008 Msa1101610:intron 20.0%
!! TAGAGATTGGAAATTTATAA+AGG - chr7_3:32381655-32381674 None:intergenic 20.0%
!! TATGCGGTTAATATTAAAAT+TGG - chr7_3:32381681-32381700 None:intergenic 20.0%
!!! TATTTGATTTTTTTTTTCCC+GGG + chr7_3:32381896-32381915 Msa1101610:intron 20.0%
!! AGGTATTAAAATAAATCAAG+TGG + chr7_3:32381922-32381941 Msa1101610:intron 20.0%
!! TCAATTATTTATTACGACTT+TGG + chr7_3:32382188-32382207 Msa1101610:CDS 20.0%
!! AAAGTTTAAGTAAATGTGAA+AGG - chr7_3:32382655-32382674 None:intergenic 20.0%
!!! AGTTTTAATCTTTTACAAGA+TGG + chr7_3:32382765-32382784 Msa1101610:intron 20.0%
!!! TATGGCAATTTTATTATTGA+TGG + chr7_3:32382991-32383010 Msa1101610:intron 20.0%
!! AGAAACAAATAAGAAAATAG+GGG - chr7_3:32383326-32383345 None:intergenic 20.0%
!!! TCATGATATCTTCATATTTT+AGG + chr7_3:32383521-32383540 Msa1101610:intron 20.0%
!! TGAGAAAAAACTATTAAAGT+AGG + chr7_3:32383554-32383573 Msa1101610:intron 20.0%
!!! GTGAAGCATTATTTTAATTA+TGG + chr7_3:32384114-32384133 Msa1101610:intron 20.0%
!!! AGAAAAAATAAGTTGAAGAA+TGG - chr7_3:32384420-32384439 None:intergenic 20.0%
!!! TTTTGTTCATACTATTCTTA+CGG + chr7_3:32384721-32384740 Msa1101610:CDS 20.0%
!! TTTCATATACAATAAGGAAT+TGG - chr7_3:32384813-32384832 None:intergenic 20.0%
! TTGTGAATGACTTAAATTCA+AGG + chr7_3:32378910-32378929 Msa1101610:intron 25.0%
! TGAACTCTATCTTAGATAAT+TGG - chr7_3:32378971-32378990 None:intergenic 25.0%
!!! ACCTTTTTAAGAGTAAGATA+TGG + chr7_3:32379088-32379107 Msa1101610:intron 25.0%
! GGTTGTTATATCTTGTAAAA+TGG + chr7_3:32379314-32379333 Msa1101610:intron 25.0%
!!! TTATTACCTAATTTTGATGG+CGG - chr7_3:32379721-32379740 None:intergenic 25.0%
!! CCATTATTACCTAATTTTGA+TGG - chr7_3:32379724-32379743 None:intergenic 25.0%
! CCATCAAAATTAGGTAATAA+TGG + chr7_3:32379721-32379740 Msa1101610:CDS 25.0%
! TAAATCAATTAGGTTTCTGT+TGG + chr7_3:32380195-32380214 Msa1101610:intron 25.0%
! TGTCCAAGTTTAATAAAAGT+TGG - chr7_3:32380323-32380342 None:intergenic 25.0%
! TTTAGTGTATTAAACTTGGT+TGG + chr7_3:32380460-32380479 Msa1101610:intron 25.0%
! TGTTTAAAGAGTTTGAAGAT+CGG + chr7_3:32380600-32380619 Msa1101610:CDS 25.0%
! AAGTAGTTATCAAAGTTCAA+AGG + chr7_3:32380681-32380700 Msa1101610:CDS 25.0%
! TTGTCTAATATTACGAAACT+TGG + chr7_3:32380888-32380907 Msa1101610:intron 25.0%
! TACTATGATATCATCCAAAA+AGG + chr7_3:32381074-32381093 Msa1101610:intron 25.0%
! ACTATGATATCATCCAAAAA+GGG + chr7_3:32381075-32381094 Msa1101610:intron 25.0%
! TCAAACTTTAACATGTAATG+AGG - chr7_3:32381302-32381321 None:intergenic 25.0%
!! GTGCAAAGTATTAAAAATGA+TGG - chr7_3:32381371-32381390 None:intergenic 25.0%
!! TGATTTTCGAAACATAAAGT+GGG + chr7_3:32381496-32381515 Msa1101610:CDS 25.0%
! TATATGAGACATGATTATGA+AGG - chr7_3:32381611-32381630 None:intergenic 25.0%
! CATAATCATGTCTCATATAT+TGG + chr7_3:32381612-32381631 Msa1101610:intron 25.0%
! TTAAAATTGGAGTTAGAGAT+TGG - chr7_3:32381668-32381687 None:intergenic 25.0%
! CTTCAAGGAAATAAAGTTAT+TGG - chr7_3:32381829-32381848 None:intergenic 25.0%
!!! TTTATTTTAATACCTGTTCC+CGG - chr7_3:32381917-32381936 None:intergenic 25.0%
! TATTAGATACACTTTCAGAT+AGG - chr7_3:32382033-32382052 None:intergenic 25.0%
! GTTGAATATATTCATCTGAT+CGG + chr7_3:32382059-32382078 Msa1101610:intron 25.0%
!! TTGATTGTTGATAAGCTATT+AGG + chr7_3:32382377-32382396 Msa1101610:intron 25.0%
!!! GACAGATTTTTGCTATAATT+CGG - chr7_3:32382510-32382529 None:intergenic 25.0%
! TTCCGAATTATCTGAATTTA+TGG + chr7_3:32382973-32382992 Msa1101610:intron 25.0%
! TGCCATAAATTCAGATAATT+CGG - chr7_3:32382978-32382997 None:intergenic 25.0%
! AGAAAATGCTCTAATAACAA+AGG - chr7_3:32383082-32383101 None:intergenic 25.0%
! TTACTTTAAATGAGGTACAA+AGG - chr7_3:32383156-32383175 None:intergenic 25.0%
!! CATATACGATATACCAATTT+TGG - chr7_3:32383209-32383228 None:intergenic 25.0%
!! AGAACTTTTCAATTTCCTTT+TGG - chr7_3:32383292-32383311 None:intergenic 25.0%
!!! AATAAGAAAATAGGGGTATT+GGG - chr7_3:32383319-32383338 None:intergenic 25.0%
!! AAATAAGAAAATAGGGGTAT+TGG - chr7_3:32383320-32383339 None:intergenic 25.0%
! CCATTAAACCTATATTTCAT+GGG - chr7_3:32383461-32383480 None:intergenic 25.0%
! TCCATTAAACCTATATTTCA+TGG - chr7_3:32383462-32383481 None:intergenic 25.0%
! ATATCCCAAATTATTTACCT+TGG + chr7_3:32383590-32383609 Msa1101610:intron 25.0%
! TGAGTTAAAGTGTATCTAAA+TGG - chr7_3:32383711-32383730 None:intergenic 25.0%
! AACTCATTTACACAATAACA+CGG + chr7_3:32383725-32383744 Msa1101610:intron 25.0%
! ATTACAAAACAAACATCATC+TGG - chr7_3:32384081-32384100 None:intergenic 25.0%
!! ACATTAAATTACGTCTTGTT+TGG + chr7_3:32384353-32384372 Msa1101610:intron 25.0%
! ATTGACACCAATATTTAGAA+AGG - chr7_3:32384540-32384559 None:intergenic 25.0%
! TAAGGAATTGGATATTTGTT+GGG - chr7_3:32384801-32384820 None:intergenic 25.0%
! ATAAGGAATTGGATATTTGT+TGG - chr7_3:32384802-32384821 None:intergenic 25.0%
!! AAGTTTTACAAAAAAGTTGC+AGG + chr7_3:32384888-32384907 Msa1101610:three_prime_UTR 25.0%
!! AGTTTTACAAAAAAGTTGCA+GGG + chr7_3:32384889-32384908 Msa1101610:three_prime_UTR 25.0%
!! TGACATTTTCTTTATCATCA+AGG - chr7_3:32384941-32384960 None:intergenic 25.0%
! AAGAAAATGTCATTGTTTAG+AGG + chr7_3:32384949-32384968 Msa1101610:three_prime_UTR 25.0%
! AGAAAATGTCATTGTTTAGA+GGG + chr7_3:32384950-32384969 Msa1101610:three_prime_UTR 25.0%
!! TTTTCTAACTATAGTGTACA+TGG - chr7_3:32384998-32385017 None:intergenic 25.0%
!! TTAAATTATGCAAGAGTACA+AGG - chr7_3:32385061-32385080 None:intergenic 25.0%
!! TGATCATTGAGTTGAAAGAA+AGG - chr7_3:32379008-32379027 None:intergenic 30.0%
CTTAGTTCAATTAGACAACA+TGG + chr7_3:32379036-32379055 Msa1101610:intron 30.0%
!! TGGTTAGTTTACTATTGTAC+TGG + chr7_3:32379056-32379075 Msa1101610:intron 30.0%
GCCATATCTTACTCTTAAAA+AGG - chr7_3:32379092-32379111 None:intergenic 30.0%
! TAGCTAGAGTTTAGAATCAT+TGG + chr7_3:32379199-32379218 Msa1101610:intron 30.0%
! AGCTAGAGTTTAGAATCATT+GGG + chr7_3:32379200-32379219 Msa1101610:intron 30.0%
TTAGGGGTAATCTTGTAAAT+TGG + chr7_3:32379272-32379291 Msa1101610:intron 30.0%
TCTTGTTAGAATTAGAACAC+TGG - chr7_3:32379430-32379449 None:intergenic 30.0%
ATAGGTATCATTACCCTAAA+TGG + chr7_3:32379501-32379520 Msa1101610:intron 30.0%
ACATCTGATAAGTTAAAGAG+TGG + chr7_3:32379652-32379671 Msa1101610:CDS 30.0%
TGGTAAATTTCGTAGATTTG+TGG + chr7_3:32379672-32379691 Msa1101610:CDS 30.0%
TAAATTTCGTAGATTTGTGG+TGG + chr7_3:32379675-32379694 Msa1101610:CDS 30.0%
TAATGGTAGAGCTGTTAAAA+TGG + chr7_3:32379738-32379757 Msa1101610:CDS 30.0%
!!! AAAACTTTTAGCTCTTCAAG+TGG - chr7_3:32379925-32379944 None:intergenic 30.0%
! TTCTTTTCGACAATGCAAAA+TGG + chr7_3:32380043-32380062 Msa1101610:CDS 30.0%
! TCTTTTCGACAATGCAAAAT+GGG + chr7_3:32380044-32380063 Msa1101610:CDS 30.0%
! TTGCATTTTAGATAAGCAGA+AGG + chr7_3:32380252-32380271 Msa1101610:intron 30.0%
! GGTCCAACTTTTATTAAACT+TGG + chr7_3:32380317-32380336 Msa1101610:CDS 30.0%
!! GTCAATATTTTCAAGCTCAT+TGG + chr7_3:32380426-32380445 Msa1101610:intron 30.0%
TTCTCGATATAACATTCTTC+AGG + chr7_3:32380502-32380521 Msa1101610:intron 30.0%
ATATAACATTCTTCAGGACA+AGG + chr7_3:32380508-32380527 Msa1101610:intron 30.0%
CGTTAGTATCATGTTTAAGA+TGG + chr7_3:32380799-32380818 Msa1101610:intron 30.0%
! TCATGTTTAAGATGGATCTA+AGG + chr7_3:32380807-32380826 Msa1101610:intron 30.0%
TATCTGGTCTAGTTATTGTA+AGG + chr7_3:32381051-32381070 Msa1101610:intron 30.0%
! TTTCAGAGAAGTGAAACTTT+TGG + chr7_3:32381189-32381208 Msa1101610:CDS 30.0%
CTTTAACATGTAATGAGGTA+AGG - chr7_3:32381297-32381316 None:intergenic 30.0%
! AAAGTTTGAGCAACTCTTTT+TGG + chr7_3:32381313-32381332 Msa1101610:intron 30.0%
! AAGTTTGAGCAACTCTTTTT+GGG + chr7_3:32381314-32381333 Msa1101610:intron 30.0%
TTATGTTTCGAAAATCACGA+CGG - chr7_3:32381493-32381512 None:intergenic 30.0%
! GTGATTTTCGAAACATAAAG+TGG + chr7_3:32381495-32381514 Msa1101610:CDS 30.0%
TATTGCAGAAAGAAACATAC+AGG - chr7_3:32381530-32381549 None:intergenic 30.0%
TCAGAGTAAATCAAGTTTCA+AGG - chr7_3:32381588-32381607 None:intergenic 30.0%
TTGATAGAAACAACACTTCA+AGG - chr7_3:32381844-32381863 None:intergenic 30.0%
ATAAGAGCAATTATGAATCC+AGG - chr7_3:32381879-32381898 None:intergenic 30.0%
!!! TTATTTTAATACCTGTTCCC+GGG - chr7_3:32381916-32381935 None:intergenic 30.0%
GTGTTACAGATATTGAAAAC+AGG + chr7_3:32382113-32382132 Msa1101610:intron 30.0%
!! GTTTTATTCCGTTTATGAGA+AGG + chr7_3:32382259-32382278 Msa1101610:CDS 30.0%
! TGAAAGAAACTAGACCTTTT+TGG - chr7_3:32382288-32382307 None:intergenic 30.0%
! ATTCAATGCCTTATTGATCT+TGG + chr7_3:32382696-32382715 Msa1101610:CDS 30.0%
!!! CATAATTTGATTTTCAGGTG+AGG + chr7_3:32382836-32382855 Msa1101610:intron 30.0%
! GAGATCTGTACAATTTTTCT+TGG + chr7_3:32382858-32382877 Msa1101610:CDS 30.0%
!!! TATTGATGGAATTTTTTGGC+AGG + chr7_3:32383005-32383024 Msa1101610:intron 30.0%
! ACCTCATTTAAAGTAAGCTA+AGG + chr7_3:32383160-32383179 Msa1101610:intron 30.0%
ACCTTAGCTTACTTTAAATG+AGG - chr7_3:32383164-32383183 None:intergenic 30.0%
!! ATATACCAATTTTGGTATGC+CGG - chr7_3:32383201-32383220 None:intergenic 30.0%
TATTGGCAATGAAACATGAT+TGG + chr7_3:32383385-32383404 Msa1101610:intron 30.0%
! CCTATTGTTCTTTTCTTTCT+CGG - chr7_3:32383422-32383441 None:intergenic 30.0%
AGAAAAGAACAATAGGATGT+AGG + chr7_3:32383426-32383445 Msa1101610:intron 30.0%
TAAACCTATATTTCATGGGA+TGG - chr7_3:32383457-32383476 None:intergenic 30.0%
CCCATGAAATATAGGTTTAA+TGG + chr7_3:32383458-32383477 Msa1101610:intron 30.0%
! AATCATGCCTTATACTGATT+TGG - chr7_3:32383488-32383507 None:intergenic 30.0%
AAATCAGTATAAGGCATGAT+TGG + chr7_3:32383487-32383506 Msa1101610:intron 30.0%
GACACCAAGGTAAATAATTT+GGG - chr7_3:32383597-32383616 None:intergenic 30.0%
TGACACCAAGGTAAATAATT+TGG - chr7_3:32383598-32383617 None:intergenic 30.0%
ACTCATTTACACAATAACAC+GGG + chr7_3:32383726-32383745 Msa1101610:intron 30.0%
! TGACTTTTTATTCTTCTGAC+AGG + chr7_3:32383794-32383813 Msa1101610:intron 30.0%
ATCTTCACAAATGAGAAATC+TGG - chr7_3:32383839-32383858 None:intergenic 30.0%
!! ATAGCATTTTAACCGAGAAT+GGG - chr7_3:32383910-32383929 None:intergenic 30.0%
! TATATCATGCATGCTTTTAC+AGG + chr7_3:32383940-32383959 Msa1101610:intron 30.0%
TACAGGAACTTCTAGATATA+AGG + chr7_3:32383957-32383976 Msa1101610:intron 30.0%
AAAGCTTAAATGAAAGTTCC+AGG - chr7_3:32384053-32384072 None:intergenic 30.0%
ACTAGAATTAACAAGTCTCA+CGG + chr7_3:32384149-32384168 Msa1101610:intron 30.0%
TCTATTCTTTGAACTCTCAA+TGG - chr7_3:32384210-32384229 None:intergenic 30.0%
ATTGAGAGTTCAAAGAATAG+AGG + chr7_3:32384209-32384228 Msa1101610:CDS 30.0%
GTATAGCTTATATGTGTAAG+CGG - chr7_3:32384862-32384881 None:intergenic 30.0%
ACGGTATAAACACGACAAAA+GGG - chr7_3:32378546-32378565 None:intergenic 35.0%
TACGGTATAAACACGACAAA+AGG - chr7_3:32378547-32378566 None:intergenic 35.0%
! ACAAAAGGTGTAAGAACAAG+TGG - chr7_3:32378626-32378645 None:intergenic 35.0%
! TTCTTACACCTTTTGTAACG+TGG + chr7_3:32378630-32378649 Msa1101610:five_prime_UTR 35.0%
AAGAAAGGTAGAAACATACC+AGG - chr7_3:32378712-32378731 None:intergenic 35.0%
GAGAAGAAGAAGAAGAAGAA+AGG - chr7_3:32378727-32378746 None:intergenic 35.0%
TTCCATAAGTTATCTCGACT+GGG + chr7_3:32378776-32378795 Msa1101610:intron 35.0%
TTAAGAGTAAGATATGGCAG+TGG + chr7_3:32379094-32379113 Msa1101610:intron 35.0%
GAGTATGACTCATAGTAGTT+AGG + chr7_3:32379226-32379245 Msa1101610:intron 35.0%
GAACTGTCATGTACAGTTTA+GGG + chr7_3:32379255-32379274 Msa1101610:intron 35.0%
AACTGTCATGTACAGTTTAG+GGG + chr7_3:32379256-32379275 Msa1101610:intron 35.0%
CAACCGGTGTTTAAATACTA+CGG - chr7_3:32379299-32379318 None:intergenic 35.0%
CGAAATTTGATCATGGAACT+CGG - chr7_3:32379365-32379384 None:intergenic 35.0%
GAACACACGAAATTTGATCA+TGG - chr7_3:32379372-32379391 None:intergenic 35.0%
ACCCTAAATGGCAGTAATAA+TGG + chr7_3:32379513-32379532 Msa1101610:exon 35.0%
! GCCATTATTACTGCCATTTA+GGG - chr7_3:32379517-32379536 None:intergenic 35.0%
! AGCCATTATTACTGCCATTT+AGG - chr7_3:32379518-32379537 None:intergenic 35.0%
TAGAGCTGTTAAAATGGTAC+CGG + chr7_3:32379744-32379763 Msa1101610:CDS 35.0%
AATAAAGTGGAGACAGTCAA+TGG + chr7_3:32379802-32379821 Msa1101610:CDS 35.0%
! CCAGGAACTGTAATTTTCAT+TGG - chr7_3:32379974-32379993 None:intergenic 35.0%
CCAATGAAAATTACAGTTCC+TGG + chr7_3:32379971-32379990 Msa1101610:CDS 35.0%
GACACGTAAAGAAAGAACAA+AGG - chr7_3:32380019-32380038 None:intergenic 35.0%
TTGCATTGTCGAAAAGAACA+CGG - chr7_3:32380041-32380060 None:intergenic 35.0%
! TTTTCTGAACTCTAACTAGC+TGG + chr7_3:32380116-32380135 Msa1101610:intron 35.0%
! CATTTTAGATAAGCAGAAGG+AGG + chr7_3:32380255-32380274 Msa1101610:intron 35.0%
TTGGACAGTTATCATCAACA+AGG + chr7_3:32380336-32380355 Msa1101610:CDS 35.0%
!! GGCTTTATTGAGAGTGAATT+AGG + chr7_3:32380560-32380579 Msa1101610:CDS 35.0%
TCAAAAAGCTTCTTCAAACC+AGG - chr7_3:32380707-32380726 None:intergenic 35.0%
AACATCACAAGATGTGCAAA+TGG - chr7_3:32380766-32380785 None:intergenic 35.0%
AAGGATTTCTGAATTGCTAG+AGG + chr7_3:32380826-32380845 Msa1101610:intron 35.0%
TATGTCTTTCACAATCAGTG+TGG - chr7_3:32381033-32381052 None:intergenic 35.0%
CTGATTGTGAAAGACATATC+TGG + chr7_3:32381035-32381054 Msa1101610:intron 35.0%
AGAAAACTTAAAGCTGATCG+CGG + chr7_3:32381161-32381180 Msa1101610:intron 35.0%
GAAAGAAACATACAGGTACT+CGG - chr7_3:32381523-32381542 None:intergenic 35.0%
TTGGGATTATACAGCAATGA+AGG + chr7_3:32381731-32381750 Msa1101610:CDS 35.0%
CACTATTCAAGATGATAACC+TGG - chr7_3:32381777-32381796 None:intergenic 35.0%
AATTATGAATCCAGGTTCAG+TGG - chr7_3:32381871-32381890 None:intergenic 35.0%
!!! ATTTTTTTTTTCCCGGGAAC+AGG + chr7_3:32381902-32381921 Msa1101610:intron 35.0%
TACACTTTCAGATAGGAACA+AGG - chr7_3:32382026-32382045 None:intergenic 35.0%
ACATCAATAGCAAGATTTCC+AGG - chr7_3:32382161-32382180 None:intergenic 35.0%
TTATTACGACTTTGGCATGA+TGG + chr7_3:32382196-32382215 Msa1101610:CDS 35.0%
TATTACGACTTTGGCATGAT+GGG + chr7_3:32382197-32382216 Msa1101610:CDS 35.0%
TTTGGCATCCTTCTCATAAA+CGG - chr7_3:32382270-32382289 None:intergenic 35.0%
TTATGAGAAGGATGCCAAAA+AGG + chr7_3:32382271-32382290 Msa1101610:CDS 35.0%
CATTACAAGAAGACACAAAC+AGG - chr7_3:32382422-32382441 None:intergenic 35.0%
TTCACATTCACACACACATT+AGG + chr7_3:32382459-32382478 Msa1101610:intron 35.0%
ATAACAAAGGTGAAGGTTGA+TGG - chr7_3:32383069-32383088 None:intergenic 35.0%
TGCTCTAATAACAAAGGTGA+AGG - chr7_3:32383076-32383095 None:intergenic 35.0%
!! AGAGCATTTTCTACACTTGA+AGG + chr7_3:32383090-32383109 Msa1101610:CDS 35.0%
TTCATGCACATTAGAAGAGA+AGG - chr7_3:32383122-32383141 None:intergenic 35.0%
GGTATATCGTATATGTGAAG+AGG + chr7_3:32383214-32383233 Msa1101610:intron 35.0%
TCTTTGTAAACCTTTCTGCA+CGG + chr7_3:32383343-32383362 Msa1101610:intron 35.0%
TCATGAGGAAAGTAGTGTAT+TGG + chr7_3:32383368-32383387 Msa1101610:intron 35.0%
CCGAGAAAGAAAAGAACAAT+AGG + chr7_3:32383419-32383438 Msa1101610:intron 35.0%
AAAGAACAATAGGATGTAGG+TGG + chr7_3:32383429-32383448 Msa1101610:intron 35.0%
TGGAACACCAAATCAGTATA+AGG + chr7_3:32383478-32383497 Msa1101610:intron 35.0%
ATAACTACATGTCTAGCGTA+GGG - chr7_3:32383621-32383640 None:intergenic 35.0%
AATAACTACATGTCTAGCGT+AGG - chr7_3:32383622-32383641 None:intergenic 35.0%
TTTATTCTTCTGACAGGCAT+AGG + chr7_3:32383800-32383819 Msa1101610:intron 35.0%
TCAGTTATTGTTCCCATTCT+CGG + chr7_3:32383895-32383914 Msa1101610:intron 35.0%
!! CATAGCATTTTAACCGAGAA+TGG - chr7_3:32383911-32383930 None:intergenic 35.0%
GCATGTGAAGATGAAAGAAT+TGG - chr7_3:32384296-32384315 None:intergenic 35.0%
TCTTTCATCTTCACATGCTA+TGG + chr7_3:32384298-32384317 Msa1101610:intron 35.0%
ACAAATGGCTACTATGTACA+CGG + chr7_3:32384502-32384521 Msa1101610:CDS 35.0%
GGAGGAACCTTTCTAAATAT+TGG + chr7_3:32384530-32384549 Msa1101610:CDS 35.0%
TTGCAAAAGTTTGATTGCCT+TGG - chr7_3:32384571-32384590 None:intergenic 35.0%
! GGCAATCAAACTTTTGCAAA+TGG + chr7_3:32384572-32384591 Msa1101610:CDS 35.0%
TTTGCAAATGGATCGTTTGT+TGG + chr7_3:32384584-32384603 Msa1101610:CDS 35.0%
GTATCAGCTTATTCATATGC+AGG + chr7_3:32384696-32384715 Msa1101610:intron 35.0%
TATTCTTACGGTCTATGCAA+AGG + chr7_3:32384733-32384752 Msa1101610:CDS 35.0%
ATTCTTACGGTCTATGCAAA+GGG + chr7_3:32384734-32384753 Msa1101610:CDS 35.0%
CAAGTGGTTGAACTTGAACA+TGG - chr7_3:32378610-32378629 None:intergenic 40.0%
TCTTGCTTCCACGTTACAAA+AGG - chr7_3:32378641-32378660 None:intergenic 40.0%
AAGGTAGAAACATACCAGGA+GGG - chr7_3:32378708-32378727 None:intergenic 40.0%
AAAGGTAGAAACATACCAGG+AGG - chr7_3:32378709-32378728 None:intergenic 40.0%
CTTCCATAAGTTATCTCGAC+TGG + chr7_3:32378775-32378794 Msa1101610:intron 40.0%
TACCCAGTCGAGATAACTTA+TGG - chr7_3:32378781-32378800 None:intergenic 40.0%
CGAACTGTCATGTACAGTTT+AGG + chr7_3:32379254-32379273 Msa1101610:intron 40.0%
GGACCGTAGTATTTAAACAC+CGG + chr7_3:32379293-32379312 Msa1101610:intron 40.0%
! GCAGTAATAATGGCTTTGCA+TGG + chr7_3:32379523-32379542 Msa1101610:CDS 40.0%
CGAAGATCACTAGACAATCT+TGG + chr7_3:32379580-32379599 Msa1101610:CDS 40.0%
GAAATGCCGCCATCAAAATT+AGG + chr7_3:32379712-32379731 Msa1101610:CDS 40.0%
!! CTTTTTGCTATCTCAGTTGC+CGG - chr7_3:32379766-32379785 None:intergenic 40.0%
GTCTCCACTTTATTCTCTGA+CGG - chr7_3:32379796-32379815 None:intergenic 40.0%
AGCTGTTAATGGAGCAAGTT+TGG + chr7_3:32379834-32379853 Msa1101610:CDS 40.0%
TTCGTTGTCTTTGTCAATGC+TGG - chr7_3:32379877-32379896 None:intergenic 40.0%
GGAAGTTCATTGGAGATTGT+AGG - chr7_3:32379901-32379920 None:intergenic 40.0%
! TTCAAGTGGTGGAAGTTCAT+TGG - chr7_3:32379911-32379930 None:intergenic 40.0%
!!! ACTTTTAGCTCTTCAAGTGG+TGG - chr7_3:32379922-32379941 None:intergenic 40.0%
! AAAGTTTTGCCCTCAGATGA+AGG + chr7_3:32379937-32379956 Msa1101610:CDS 40.0%
TACATCAATTGATCTCTGCC+AGG - chr7_3:32379992-32380011 None:intergenic 40.0%
GGCAGAGATCAATTGATGTA+TGG + chr7_3:32379992-32380011 Msa1101610:CDS 40.0%
CAATGCAAAATGGGCATATC+CGG + chr7_3:32380053-32380072 Msa1101610:CDS 40.0%
AATGCAAAATGGGCATATCC+GGG + chr7_3:32380054-32380073 Msa1101610:CDS 40.0%
TTCACAGAAGAAAAGCAGGT+AGG + chr7_3:32380081-32380100 Msa1101610:intron 40.0%
! GAAGAAAAGCAGGTAGGTTT+TGG + chr7_3:32380087-32380106 Msa1101610:intron 40.0%
CTAGCTGGTAGAAAGTTTCT+CGG + chr7_3:32380131-32380150 Msa1101610:intron 40.0%
GATAAGCAGAAGGAGGAAAA+CGG + chr7_3:32380262-32380281 Msa1101610:intron 40.0%
AGGGAATCTGTATTACAGCT+CGG + chr7_3:32380296-32380315 Msa1101610:CDS 40.0%
TCTATTTCCCCGTGAATTTG+TGG + chr7_3:32380364-32380383 Msa1101610:CDS 40.0%
AGTTCATCCACAAATTCACG+GGG - chr7_3:32380374-32380393 None:intergenic 40.0%
GAGTTCATCCACAAATTCAC+GGG - chr7_3:32380375-32380394 None:intergenic 40.0%
CGAGTTCATCCACAAATTCA+CGG - chr7_3:32380376-32380395 None:intergenic 40.0%
TAAAGCCTCTTGCTTTCTGT+GGG - chr7_3:32380547-32380566 None:intergenic 40.0%
ATAAAGCCTCTTGCTTTCTG+TGG - chr7_3:32380548-32380567 None:intergenic 40.0%
GTTATCAAAGTTCAAAGGCC+TGG + chr7_3:32380686-32380705 Msa1101610:CDS 40.0%
!! CAAGCTTTAACGTCCCTTTT+TGG - chr7_3:32381091-32381110 None:intergenic 40.0%
CAAAAAGGGACGTTAAAGCT+TGG + chr7_3:32381089-32381108 Msa1101610:intron 40.0%
!!! CAGCTTTAAGTTTTCTGGAC+AGG - chr7_3:32381157-32381176 None:intergenic 40.0%
!!! GCGATCAGCTTTAAGTTTTC+TGG - chr7_3:32381162-32381181 None:intergenic 40.0%
! CAGAGAAGTGAAACTTTTGG+TGG + chr7_3:32381192-32381211 Msa1101610:CDS 40.0%
ATACCGATCCAATCTCTAGT+TGG - chr7_3:32381219-32381238 None:intergenic 40.0%
ATGAAGGGAAGAATGCTGAT+AGG + chr7_3:32381465-32381484 Msa1101610:CDS 40.0%
! ACCCTTGTAGCTGGTTTATT+GGG + chr7_3:32381713-32381732 Msa1101610:intron 40.0%
TCCCAATAAACCAGCTACAA+GGG - chr7_3:32381717-32381736 None:intergenic 40.0%
ATCCCAATAAACCAGCTACA+AGG - chr7_3:32381718-32381737 None:intergenic 40.0%
ATAACCTGGTACATACTCCA+AGG - chr7_3:32381763-32381782 None:intergenic 40.0%
TATCAATATGCCACTGAACC+TGG + chr7_3:32381858-32381877 Msa1101610:intron 40.0%
! AATCTCATCACGTGCTATTG+AGG + chr7_3:32381979-32381998 Msa1101610:CDS 40.0%
TATTGAGGCGTACTTGATTC+AGG + chr7_3:32381994-32382013 Msa1101610:CDS 40.0%
ATAGCAAGATTTCCAGGATG+TGG - chr7_3:32382155-32382174 None:intergenic 40.0%
ATTACGACTTTGGCATGATG+GGG + chr7_3:32382198-32382217 Msa1101610:CDS 40.0%
CTTTCAATTGACAACGATGC+AGG + chr7_3:32382671-32382690 Msa1101610:intron 40.0%
AGCAGACATTGTCTGCAATT+GGG + chr7_3:32382911-32382930 Msa1101610:CDS 40.0%
!! AATTTTGGTATGCCGGACTT+CGG - chr7_3:32383194-32383213 None:intergenic 40.0%
GAATATGAACCTAAGCTCGA+AGG + chr7_3:32383253-32383272 Msa1101610:intron 40.0%
!! GGCTTGTTGCTTTAACCAAA+AGG + chr7_3:32383274-32383293 Msa1101610:intron 40.0%
GGATCCATCCCATGAAATAT+AGG + chr7_3:32383450-32383469 Msa1101610:intron 40.0%
! TTTGGGATATCTCTCACAAC+TGG - chr7_3:32383580-32383599 None:intergenic 40.0%
ATGATGTACCACACTTTACC+TGG + chr7_3:32384032-32384051 Msa1101610:intron 40.0%
TGAAAGTTCCAGGTAAAGTG+TGG - chr7_3:32384043-32384062 None:intergenic 40.0%
AAGTCTCACGGAACATTTGT+AGG + chr7_3:32384161-32384180 Msa1101610:intron 40.0%
!! AACTCTCAATGGCATTGACA+TGG - chr7_3:32384199-32384218 None:intergenic 40.0%
GAAAGCGACAGTGTTACAAA+TGG + chr7_3:32384487-32384506 Msa1101610:CDS 40.0%
GCTACTATGTACACGGTATT+AGG + chr7_3:32384509-32384528 Msa1101610:CDS 40.0%
ACTATGTACACGGTATTAGG+AGG + chr7_3:32384512-32384531 Msa1101610:CDS 40.0%
! GCTTTATTCTTGCGACTGAT+TGG + chr7_3:32384674-32384693 Msa1101610:intron 40.0%
! CCATAACTACTGTGGTAATG+TGG - chr7_3:32385034-32385053 None:intergenic 40.0%
CCACATTACCACAGTAGTTA+TGG + chr7_3:32385031-32385050 Msa1101610:three_prime_UTR 40.0%
AAGGAAAGCCATAACTACTG+TGG - chr7_3:32385042-32385061 None:intergenic 40.0%
!! TCCAAGTGCTGGTAATGTTT+GGG - chr7_3:32385085-32385104 None:intergenic 40.0%
!! ATCCAAGTGCTGGTAATGTT+TGG - chr7_3:32385086-32385105 None:intergenic 40.0%
AATGACAGACACCCTCCAAA+AGG - chr7_3:32378681-32378700 None:intergenic 45.0%
!!! GTCTGTCATTTTTTCCCTCC+TGG + chr7_3:32378691-32378710 Msa1101610:five_prime_UTR 45.0%
CTCGGCTTACGAATGCATAA+TGG - chr7_3:32379347-32379366 None:intergenic 45.0%
GACACCGTCAGAGAATAAAG+TGG + chr7_3:32379789-32379808 Msa1101610:CDS 45.0%
GGCTCAAAGCAAGCTGTTAA+TGG + chr7_3:32379823-32379842 Msa1101610:CDS 45.0%
GTCTTTGTCAATGCTGGAGT+AGG - chr7_3:32379871-32379890 None:intergenic 45.0%
CAACTGAAGCCTTCATCTGA+GGG - chr7_3:32379949-32379968 None:intergenic 45.0%
CTCAGATGAAGGCTTCAGTT+GGG + chr7_3:32379948-32379967 Msa1101610:CDS 45.0%
! TTTTCTTCTGTGAAGCCACC+CGG - chr7_3:32380075-32380094 None:intergenic 45.0%
TGGCTTCACAGAAGAAAAGC+AGG + chr7_3:32380077-32380096 Msa1101610:CDS 45.0%
GAAAACGGCTTCATGGCTAA+GGG + chr7_3:32380277-32380296 Msa1101610:CDS 45.0%
GGATGAACTCGCAAAATTGC+AGG + chr7_3:32380385-32380404 Msa1101610:CDS 45.0%
AAAGCCTCTTGCTTTCTGTG+GGG - chr7_3:32380546-32380565 None:intergenic 45.0%
CATCGTGCAATTCTGCACAA+TGG + chr7_3:32380653-32380672 Msa1101610:CDS 45.0%
GACAGGACAAGAAACTCGTT+AGG - chr7_3:32381140-32381159 None:intergenic 45.0%
! TTGGTGGTCCAACTAGAGAT+TGG + chr7_3:32381208-32381227 Msa1101610:CDS 45.0%
GGTCCAACTAGAGATTGGAT+CGG + chr7_3:32381213-32381232 Msa1101610:CDS 45.0%
!!! TCCTGCACATGCTACTTTTC+AGG + chr7_3:32381414-32381433 Msa1101610:intron 45.0%
TCCTGAAAAGTAGCATGTGC+AGG - chr7_3:32381418-32381437 None:intergenic 45.0%
GGGTGCAAATGAAGGATATG+CGG - chr7_3:32381697-32381716 None:intergenic 45.0%
! AGCTACAAGGGTGCAAATGA+AGG - chr7_3:32381705-32381724 None:intergenic 45.0%
TTCATTTGCACCCTTGTAGC+TGG + chr7_3:32381704-32381723 Msa1101610:intron 45.0%
! CACCCTTGTAGCTGGTTTAT+TGG + chr7_3:32381712-32381731 Msa1101610:intron 45.0%
!! AGCAATGAAGGTGTTGACCT+TGG + chr7_3:32381743-32381762 Msa1101610:CDS 45.0%
TTGACCTTGGAGTATGTACC+AGG + chr7_3:32381756-32381775 Msa1101610:CDS 45.0%
!! GTGGATACATTGACTTCTCG+TGG + chr7_3:32381941-32381960 Msa1101610:CDS 45.0%
TTACGACTTTGGCATGATGG+GGG + chr7_3:32382199-32382218 Msa1101610:CDS 45.0%
ACAGTTCGAGCAATCTCTCA+CGG - chr7_3:32382241-32382260 None:intergenic 45.0%
CCTCTTAGCTACCAATTCCA+GGG + chr7_3:32382627-32382646 Msa1101610:intron 45.0%
CTCTTAGCTACCAATTCCAG+GGG + chr7_3:32382628-32382647 Msa1101610:intron 45.0%
AGTAAATGTGAAAGGACCCC+TGG - chr7_3:32382647-32382666 None:intergenic 45.0%
GACAATGTCTGCTCTTGATC+TGG - chr7_3:32382904-32382923 None:intergenic 45.0%
GAGCAGACATTGTCTGCAAT+TGG + chr7_3:32382910-32382929 Msa1101610:CDS 45.0%
GCAGACATTGTCTGCAATTG+GGG + chr7_3:32382912-32382931 Msa1101610:CDS 45.0%
!! AAGGTTGATGGAAACCGGAA+TGG - chr7_3:32383057-32383076 None:intergenic 45.0%
!! AGGTGAAGGTTGATGGAAAC+CGG - chr7_3:32383062-32383081 None:intergenic 45.0%
GAAGTCCGGCATACCAAAAT+TGG + chr7_3:32383193-32383212 Msa1101610:intron 45.0%
ACAGTCTGAACCTGTGCATA+GGG - chr7_3:32383869-32383888 None:intergenic 45.0%
GGAGTTTGTGAAGCAAGTTG+AGG + chr7_3:32384230-32384249 Msa1101610:CDS 45.0%
! TTTGTGAAGCAAGTTGAGGC+AGG + chr7_3:32384234-32384253 Msa1101610:CDS 45.0%
CTACCTCTAGTACTCGAACT+CGG - chr7_3:32384272-32384291 None:intergenic 45.0%
TCTAGTCTGAAAGAGCTGCT+CGG + chr7_3:32384465-32384484 Msa1101610:intron 45.0%
! GGTGTCAATTTGACTAGCCA+AGG + chr7_3:32384551-32384570 Msa1101610:CDS 45.0%
! AATGGATCGTTTGTTGGTGC+AGG + chr7_3:32384590-32384609 Msa1101610:CDS 45.0%
TCCCAAACATTACCAGCACT+TGG + chr7_3:32385081-32385100 Msa1101610:three_prime_UTR 45.0%
AAGCAAGAACGTCCTCCTAG+TGG + chr7_3:32378653-32378672 Msa1101610:five_prime_UTR 50.0%
AGCAAGAACGTCCTCCTAGT+GGG + chr7_3:32378654-32378673 Msa1101610:five_prime_UTR 50.0%
!! TCCTAGTGGGTCCTTTTGGA+GGG + chr7_3:32378667-32378686 Msa1101610:five_prime_UTR 50.0%
CCAACTGAAGCCTTCATCTG+AGG - chr7_3:32379950-32379969 None:intergenic 50.0%
CCTCAGATGAAGGCTTCAGT+TGG + chr7_3:32379947-32379966 Msa1101610:CDS 50.0%
GAAGGAGGAAAACGGCTTCA+TGG + chr7_3:32380270-32380289 Msa1101610:CDS 50.0%
GGAAAACGGCTTCATGGCTA+AGG + chr7_3:32380276-32380295 Msa1101610:CDS 50.0%
TTCTCCCCACAGAAAGCAAG+AGG + chr7_3:32380539-32380558 Msa1101610:CDS 50.0%
CCAATTGCTGCTGCAAGTCT+CGG + chr7_3:32380623-32380642 Msa1101610:CDS 50.0%
TTTCACGCTGATCCACATCC+TGG + chr7_3:32382140-32382159 Msa1101610:CDS 50.0%
CAGTTCGAGCAATCTCTCAC+GGG - chr7_3:32382240-32382259 None:intergenic 50.0%
GCCTCTTAGCTACCAATTCC+AGG + chr7_3:32382626-32382645 Msa1101610:intron 50.0%
! CCCTGGAATTGGTAGCTAAG+AGG - chr7_3:32382630-32382649 None:intergenic 50.0%
TGTGAAAGGACCCCTGGAAT+TGG - chr7_3:32382641-32382660 None:intergenic 50.0%
GGAGGGCTCCAAGATCAATA+AGG - chr7_3:32382707-32382726 None:intergenic 50.0%
TCTGCTCTTGATCTGGTGAC+TGG - chr7_3:32382897-32382916 None:intergenic 50.0%
GACATTGTCTGCAATTGGGG+AGG + chr7_3:32382915-32382934 Msa1101610:CDS 50.0%
TAGCACAAGACCAGCCATTC+CGG + chr7_3:32383040-32383059 Msa1101610:CDS 50.0%
TTGATGGAAACCGGAATGGC+TGG - chr7_3:32383053-32383072 None:intergenic 50.0%
AGCAACAAGCCTTCGAGCTT+AGG - chr7_3:32383265-32383284 None:intergenic 50.0%
CCTCATGAAACCGTGCAGAA+AGG - chr7_3:32383356-32383375 None:intergenic 50.0%
CCTTTCTGCACGGTTTCATG+AGG + chr7_3:32383353-32383372 Msa1101610:intron 50.0%
GACAGTCTGAACCTGTGCAT+AGG - chr7_3:32383870-32383889 None:intergenic 50.0%
ACTCCGAGTTCGAGTACTAG+AGG + chr7_3:32384266-32384285 Msa1101610:CDS 50.0%
CGAGTTCGAGTACTAGAGGT+AGG + chr7_3:32384270-32384289 Msa1101610:intron 50.0%
!! TTGCAGGGTGTTGACACTGT+AGG + chr7_3:32384904-32384923 Msa1101610:three_prime_UTR 50.0%
!! GTCCTCCTAGTGGGTCCTTT+TGG + chr7_3:32378663-32378682 Msa1101610:five_prime_UTR 55.0%
CTCCAAAAGGACCCACTAGG+AGG - chr7_3:32378668-32378687 None:intergenic 55.0%
!! CTCCTAGTGGGTCCTTTTGG+AGG + chr7_3:32378666-32378685 Msa1101610:five_prime_UTR 55.0%
ACCCTCCAAAAGGACCCACT+AGG - chr7_3:32378671-32378690 None:intergenic 55.0%
GCAAAATGGGCATATCCGGG+TGG + chr7_3:32380057-32380076 Msa1101610:CDS 55.0%
GCTTTCTGTGGGGAGAAAGC+AGG - chr7_3:32380536-32380555 None:intergenic 55.0%
CCGAGACTTGCAGCAGCAAT+TGG - chr7_3:32380626-32380645 None:intergenic 55.0%
CCTTACAGCTGACAGATCCC+CGG - chr7_3:32382736-32382755 None:intergenic 55.0%
AAGGTCAACCCACCGAAGTC+CGG + chr7_3:32383179-32383198 Msa1101610:intron 55.0%
TTGGTATGCCGGACTTCGGT+GGG - chr7_3:32383190-32383209 None:intergenic 55.0%
TTTGGTATGCCGGACTTCGG+TGG - chr7_3:32383191-32383210 None:intergenic 55.0%
TCTAGCGTAGGGTGACACCA+AGG - chr7_3:32383610-32383629 None:intergenic 55.0%
GATTGCTGCACCCTATGCAC+AGG + chr7_3:32383856-32383875 Msa1101610:CDS 55.0%
ATAAGGCAACGACAGCCCAC+AGG + chr7_3:32383974-32383993 Msa1101610:CDS 55.0%
TAAGGCAACGACAGCCCACA+GGG + chr7_3:32383975-32383994 Msa1101610:CDS 55.0%
GCACTGCAAGATCCAAGTGC+TGG - chr7_3:32385096-32385115 None:intergenic 55.0%
TGCTGCTGCAAGTCTCGGTC+AGG + chr7_3:32380628-32380647 Msa1101610:CDS 60.0%
ACAGCTGACAGATCCCCGGT+GGG - chr7_3:32382732-32382751 None:intergenic 60.0%
TACAGCTGACAGATCCCCGG+TGG - chr7_3:32382733-32382752 None:intergenic 60.0%
CCGGGGATCTGTCAGCTGTA+AGG + chr7_3:32382733-32382752 Msa1101610:intron 60.0%
GCTATCTGCCCGACGAGTTG+TGG - chr7_3:32384001-32384020 None:intergenic 60.0%
CTTGGAGCCCTCCAACCCAC+CGG + chr7_3:32382714-32382733 Msa1101610:CDS 65.0%
TTGGAGCCCTCCAACCCACC+GGG + chr7_3:32382715-32382734 Msa1101610:CDS 65.0%
!! CAGATCCCCGGTGGGTTGGA+GGG - chr7_3:32382724-32382743 None:intergenic 65.0%
!! ACAGATCCCCGGTGGGTTGG+AGG - chr7_3:32382725-32382744 None:intergenic 65.0%
CTGACAGATCCCCGGTGGGT+TGG - chr7_3:32382728-32382747 None:intergenic 65.0%
CCGACGAGTTGTGGCCCTGT+GGG - chr7_3:32383992-32384011 None:intergenic 65.0%
CCCACAGGGCCACAACTCGT+CGG + chr7_3:32383989-32384008 Msa1101610:CDS 65.0%
CCACAGGGCCACAACTCGTC+GGG + chr7_3:32383990-32384009 Msa1101610:CDS 65.0%
TGGAGCCCTCCAACCCACCG+GGG + chr7_3:32382716-32382735 Msa1101610:CDS 70.0%
CCCGACGAGTTGTGGCCCTG+TGG - chr7_3:32383993-32384012 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 32378530 32385122 32378530 ID=Msa1101610;Name=Msa1101610
chr7_3 mRNA 32378530 32385122 32378530 ID=Msa1101610-mRNA-1;Parent=Msa1101610;Name=Msa1101610-mRNA-1;_AED=0.08;_eAED=0.08;_QI=198|1|1|1|0.93|0.88|17|331|708
chr7_3 exon 32378530 32378712 32378530 ID=Msa1101610-mRNA-1:exon:7039;Parent=Msa1101610-mRNA-1
chr7_3 exon 32379505 32380098 32379505 ID=Msa1101610-mRNA-1:exon:7040;Parent=Msa1101610-mRNA-1
chr7_3 exon 32380263 32380406 32380263 ID=Msa1101610-mRNA-1:exon:7041;Parent=Msa1101610-mRNA-1
chr7_3 exon 32380524 32380737 32380524 ID=Msa1101610-mRNA-1:exon:7042;Parent=Msa1101610-mRNA-1
chr7_3 exon 32381163 32381256 32381163 ID=Msa1101610-mRNA-1:exon:7043;Parent=Msa1101610-mRNA-1
chr7_3 exon 32381436 32381529 32381436 ID=Msa1101610-mRNA-1:exon:7044;Parent=Msa1101610-mRNA-1
chr7_3 exon 32381723 32381777 32381723 ID=Msa1101610-mRNA-1:exon:7045;Parent=Msa1101610-mRNA-1
chr7_3 exon 32381924 32382015 32381924 ID=Msa1101610-mRNA-1:exon:7046;Parent=Msa1101610-mRNA-1
chr7_3 exon 32382122 32382292 32382122 ID=Msa1101610-mRNA-1:exon:7047;Parent=Msa1101610-mRNA-1
chr7_3 exon 32382693 32382749 32382693 ID=Msa1101610-mRNA-1:exon:7048;Parent=Msa1101610-mRNA-1
chr7_3 exon 32382853 32382936 32382853 ID=Msa1101610-mRNA-1:exon:7049;Parent=Msa1101610-mRNA-1
chr7_3 exon 32383027 32383111 32383027 ID=Msa1101610-mRNA-1:exon:7050;Parent=Msa1101610-mRNA-1
chr7_3 exon 32383816 32383877 32383816 ID=Msa1101610-mRNA-1:exon:7051;Parent=Msa1101610-mRNA-1
chr7_3 exon 32383962 32384036 32383962 ID=Msa1101610-mRNA-1:exon:7052;Parent=Msa1101610-mRNA-1
chr7_3 exon 32384183 32384287 32384183 ID=Msa1101610-mRNA-1:exon:7053;Parent=Msa1101610-mRNA-1
chr7_3 exon 32384470 32384611 32384470 ID=Msa1101610-mRNA-1:exon:7054;Parent=Msa1101610-mRNA-1
chr7_3 exon 32384718 32385122 32384718 ID=Msa1101610-mRNA-1:exon:7055;Parent=Msa1101610-mRNA-1
chr7_3 five_prime_UTR 32378530 32378712 32378530 ID=Msa1101610-mRNA-1:five_prime_utr;Parent=Msa1101610-mRNA-1
chr7_3 five_prime_UTR 32379505 32379519 32379505 ID=Msa1101610-mRNA-1:five_prime_utr;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32379520 32380098 32379520 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32380263 32380406 32380263 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32380524 32380737 32380524 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32381163 32381256 32381163 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32381436 32381529 32381436 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32381723 32381777 32381723 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32381924 32382015 32381924 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32382122 32382292 32382122 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32382693 32382749 32382693 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32382853 32382936 32382853 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32383027 32383111 32383027 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32383816 32383877 32383816 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32383962 32384036 32383962 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32384183 32384287 32384183 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32384470 32384611 32384470 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 CDS 32384718 32384791 32384718 ID=Msa1101610-mRNA-1:cds;Parent=Msa1101610-mRNA-1
chr7_3 three_prime_UTR 32384792 32385122 32384792 ID=Msa1101610-mRNA-1:three_prime_utr;Parent=Msa1101610-mRNA-1
Gene Sequence

>Msa1101610

ATGGCAGTAATAATGGCTTTGCATGGTTGTTATTGTAACAATATAGAATCGGTAAATCAGCGAAGATCACTAGACAATCTTGGTTTTACAAGCTCAATTTCATCTCATAAATTGTCAAAGAATGAAAGGTCAACATCTGATAAGTTAAAGAGTGGTAAATTTCGTAGATTTGTGGTGGAAATGCGACAGACAGAAATGCCGCCATCAAAATTAGGTAATAATGGTAGAGCTGTTAAAATGGTACCGGCAACTGAGATAGCAAAAAGAAAGACACCGTCAGAGAATAAAGTGGAGACAGTCAATGGCTCAAAGCAAGCTGTTAATGGAGCAAGTTTGGTAAGAAGAGATCCTACTCCAGCATTGACAAAGACAACGAAACCTACAATCTCCAATGAACTTCCACCACTTGAAGAGCTAAAAGTTTTGCCCTCAGATGAAGGCTTCAGTTGGGCCAATGAAAATTACAGTTCCTGGCAGAGATCAATTGATGTATGGTCCTTTGTTCTTTCTTTACGTGTCCGTGTTCTTTTCGACAATGCAAAATGGGCATATCCGGGTGGCTTCACAGAAGAAAAGCAGATAAGCAGAAGGAGGAAAACGGCTTCATGGCTAAGGGAATCTGTATTACAGCTCGGTCCAACTTTTATTAAACTTGGACAGTTATCATCAACAAGGTCAGATCTATTTCCCCGTGAATTTGTGGATGAACTCGCAAAATTGCAGGACAAGGTACCTGCTTTCTCCCCACAGAAAGCAAGAGGCTTTATTGAGAGTGAATTAGGAGCTCCCATTAATGAATTGTTTAAAGAGTTTGAAGATCGGCCAATTGCTGCTGCAAGTCTCGGTCAGGTTCATCGTGCAATTCTGCACAATGGAGAAAAAGTAGTTATCAAAGTTCAAAGGCCTGGTTTGAAGAAGCTTTTTGACATTGACTTGCAAAACTTAAAGCTGATCGCGGAGTATTTTCAGAGAAGTGAAACTTTTGGTGGTCCAACTAGAGATTGGATCGGTATTTATGAAGAATGTGCAACGATTTTATACCAAGAAATTGATTATATAAATGAAGGGAAGAATGCTGATAGGTTCCGTCGTGATTTTCGAAACATAAAGTGGGTCCGAGTACCTCTGGTTTATTGGGATTATACAGCAATGAAGGTGTTGACCTTGGAGTATGTACCAGGTATTAAAATAAATCAAGTGGATACATTGACTTCTCGTGGTTATGATCGATTGAGAATCTCATCACGTGCTATTGAGGCGTACTTGATTCAGATATTGAAAACAGGTTTCTTTCACGCTGATCCACATCCTGGAAATCTTGCTATTGATGTTGATGAATCAATTATTTATTACGACTTTGGCATGATGGGGGAGATAAAATCTTTCACCCGTGAGAGATTGCTCGAACTGTTTTATTCCGTTTATGAGAAGGATGCCAAAAAGGTTATTCAATGCCTTATTGATCTTGGAGCCCTCCAACCCACCGGGGATCTGTCAGCTGTGAGGAGATCTGTACAATTTTTCTTGGACAATCTTCTAAACCAGTCACCAGATCAAGAGCAGACATTGTCTGCAATTGGGGAGGATTTGTTTGCAATAGCACAAGACCAGCCATTCCGGTTTCCATCAACCTTCACCTTTGTTATTAGAGCATTTTCTACACTTGAAGGCATAGGATACACACTCACTCCAGATTTCTCATTTGTGAAGATTGCTGCACCCTATGCACAGGAACTTCTAGATATAAGGCAACGACAGCCCACAGGGCCACAACTCGTCGGGCAGATAGCAAAACAAGCAAATGATGTAAGAACAAATTCCATGTCAATGCCATTGAGAGTTCAAAGAATAGAGGAGTTTGTGAAGCAAGTTGAGGCAGGAGATCTGAAACTCCGAGTTCGAGTACTAGAGTCTGAAAGAGCTGCTCGGAAAGCGACAGTGTTACAAATGGCTACTATGTACACGGTATTAGGAGGAACCTTTCTAAATATTGGTGTCAATTTGACTAGCCAAGGCAATCAAACTTTTGCAAATGGATCGTTTGTTGGTGCAGGTATTTTGTTCATACTATTCTTACGGTCTATGCAAAGGGTACAGAAGCTTGACAAGTTTGAGAAAATGTTATAA
Protein sequence

>Msa1101610

MAVIMALHGCYCNNIESVNQRRSLDNLGFTSSISSHKLSKNERSTSDKLKSGKFRRFVVEMRQTEMPPSKLGNNGRAVKMVPATEIAKRKTPSENKVETVNGSKQAVNGASLVRRDPTPALTKTTKPTISNELPPLEELKVLPSDEGFSWANENYSSWQRSIDVWSFVLSLRVRVLFDNAKWAYPGGFTEEKQISRRRKTASWLRESVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDKVPAFSPQKARGFIESELGAPINELFKEFEDRPIAAASLGQVHRAILHNGEKVVIKVQRPGLKKLFDIDLQNLKLIAEYFQRSETFGGPTRDWIGIYEECATILYQEIDYINEGKNADRFRRDFRNIKWVRVPLVYWDYTAMKVLTLEYVPGIKINQVDTLTSRGYDRLRISSRAIEAYLIQILKTGFFHADPHPGNLAIDVDESIIYYDFGMMGEIKSFTRERLLELFYSVYEKDAKKVIQCLIDLGALQPTGDLSAVRRSVQFFLDNLLNQSPDQEQTLSAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGYTLTPDFSFVKIAAPYAQELLDIRQRQPTGPQLVGQIAKQANDVRTNSMSMPLRVQRIEEFVKQVEAGDLKLRVRVLESERAARKATVLQMATMYTVLGGTFLNIGVNLTSQGNQTFANGSFVGAGILFILFLRSMQRVQKLDKFEKML*