AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0438680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0438680 MtrunA17_Chr3g0120791 97.447 666 17 0 1 666 1 666 0.0 1338
Msa0438680 MtrunA17_Chr3g0129101 48.221 562 250 9 138 665 143 697 6.40e-180 529
Msa0438680 MtrunA17_Chr8g0382921 45.701 628 290 11 72 665 78 688 6.76e-180 529
Msa0438680 MtrunA17_Chr3g0136721 37.692 390 226 4 198 575 132 516 2.25e-79 266
Msa0438680 MtrunA17_Chr4g0012061 35.128 390 240 5 197 580 148 530 6.05e-70 241
Msa0438680 MtrunA17_Chr6g0465161 35.904 376 228 4 201 575 129 492 7.16e-68 235
Msa0438680 MtrunA17_Chr7g0230671 30.255 509 332 8 74 580 31 518 4.34e-67 233
Msa0438680 MtrunA17_Chr1g0169361 33.638 437 264 8 150 580 142 558 3.31e-64 226
Msa0438680 MtrunA17_Chr1g0148121 34.109 387 241 5 201 580 131 510 2.49e-59 211
Msa0438680 MtrunA17_Chr1g0199921 29.481 424 283 4 204 614 203 623 4.97e-51 190
Msa0438680 MtrunA17_Chr1g0147481 26.503 449 285 9 168 580 86 525 1.33e-43 169
Msa0438680 MtrunA17_Chr8g0360981 31.003 329 191 8 198 497 203 524 1.44e-38 151
Msa0438680 MtrunA17_Chr5g0433911 30.072 276 178 5 215 483 77 344 1.20e-37 147
Msa0438680 MtrunA17_Chr3g0113361 27.073 410 261 8 185 563 69 471 2.05e-37 147
Msa0438680 MtrunA17_Chr4g0057941 26.782 463 265 14 154 580 26 450 1.38e-36 143
Msa0438680 MtrunA17_Chr4g0048521 29.909 331 200 8 203 506 217 542 9.49e-35 140
Msa0438680 MtrunA17_Chr5g0428451 25.126 398 263 6 203 570 127 519 1.20e-32 132
Msa0438680 MtrunA17_Chr2g0281061 29.206 315 194 7 203 493 214 523 2.54e-32 132
Msa0438680 MtrunA17_Chr1g0193751 28.947 304 192 8 199 492 225 514 2.87e-22 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0438680 AT3G07700.1 74.851 672 144 9 1 666 1 653 0.0 1020
Msa0438680 AT3G07700.2 74.851 672 144 9 1 666 1 653 0.0 1020
Msa0438680 AT3G07700.4 74.851 672 144 9 1 666 1 653 0.0 1020
Msa0438680 AT3G07700.3 71.755 701 144 10 1 666 1 682 0.0 1005
Msa0438680 AT5G64940.1 47.518 564 253 8 138 665 158 714 3.61e-176 521
Msa0438680 AT5G64940.2 47.518 564 253 8 138 665 158 714 3.61e-176 521
Msa0438680 AT5G24970.3 35.088 399 231 4 198 575 134 525 2.43e-73 251
Msa0438680 AT5G24970.2 35.088 399 231 4 198 575 173 564 8.72e-73 250
Msa0438680 AT1G79600.1 34.815 405 251 5 186 580 124 525 3.65e-70 242
Msa0438680 AT1G71810.1 36.170 376 227 4 201 575 120 483 1.51e-69 240
Msa0438680 AT5G24970.1 34.336 399 231 5 198 575 134 522 4.62e-69 239
Msa0438680 AT3G24190.1 34.430 395 244 6 189 580 184 566 1.08e-61 220
Msa0438680 AT4G31390.1 33.333 387 244 5 201 580 167 546 2.08e-57 206
Msa0438680 AT2G39190.2 30.380 395 252 4 204 580 202 591 4.02e-51 190
Msa0438680 AT4G31390.3 32.768 354 224 5 234 580 1 347 1.16e-48 178
Msa0438680 AT4G31390.2 31.266 387 227 6 201 580 167 521 1.73e-47 178
Msa0438680 AT4G24810.2 27.766 461 302 10 146 589 15 461 1.72e-42 160
Msa0438680 AT5G50330.1 28.761 452 286 10 152 580 14 452 5.26e-42 159
Msa0438680 AT5G24810.1 27.706 462 280 11 168 588 60 508 3.69e-41 161
Msa0438680 AT4G24810.6 29.008 393 259 7 211 589 32 418 6.54e-41 155
Msa0438680 AT4G24810.1 29.008 393 259 7 211 589 32 418 6.54e-41 155
Msa0438680 AT1G65950.2 30.657 274 177 6 215 482 113 379 3.72e-39 150
Msa0438680 AT4G24810.3 28.750 400 258 8 211 589 32 425 3.96e-39 150
Msa0438680 AT1G65950.1 30.657 274 177 6 215 482 113 379 2.22e-38 150
Msa0438680 AT4G24810.4 31.724 290 179 6 211 486 32 316 1.29e-37 142
Msa0438680 AT5G24810.2 26.369 493 278 13 168 588 60 539 3.84e-37 149
Msa0438680 AT4G24810.5 33.209 268 160 6 211 464 32 294 1.03e-36 140
Msa0438680 AT5G50330.2 26.829 451 280 10 152 580 14 436 4.23e-34 136
Msa0438680 AT5G05200.1 24.879 414 276 6 186 570 113 520 6.35e-34 137
Msa0438680 AT2G40090.1 28.617 311 200 5 199 491 87 393 1.47e-32 132
Msa0438680 AT1G11390.1 28.125 352 216 9 187 508 198 542 6.70e-32 132
Msa0438680 AT1G61640.3 28.267 329 202 10 204 506 213 533 1.21e-28 121
Msa0438680 AT1G61640.1 28.267 329 202 10 204 506 213 533 1.43e-28 121
Msa0438680 AT2G39190.1 36.250 160 99 1 204 363 202 358 1.46e-22 100
Msa0438680 AT4G01660.1 27.778 306 211 5 198 501 222 519 2.60e-22 102
Msa0438680 AT1G61640.2 30.978 184 109 6 204 375 213 390 7.02e-18 87.4

Find 161 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCCTTGTAGCTGGTTTAT+TGG 0.177430 3_3:-3454924 Msa0438680:intron
CTCTTTAAACAATTCATTAA+TGG 0.177743 3_3:+3456048 None:intergenic
CATTTATATAATCAATTTCT+TGG 0.199717 3_3:+3455191 None:intergenic
AGCCATTATTACTGCCATTT+AGG 0.200934 3_3:+3457121 None:intergenic
TACAGGAACTTCTAGATATA+AGG 0.236116 3_3:-3452676 Msa0438680:intron
GGAGGAACCTTTCTAAATAT+TGG 0.238190 3_3:-3452103 Msa0438680:CDS
ATAGGTATCATTACCCTAAA+TGG 0.241840 3_3:-3457135 Msa0438680:intron
GGCTTTATTGAGAGTGAATT+AGG 0.254061 3_3:-3456076 Msa0438680:CDS
ACCCTTGTAGCTGGTTTATT+GGG 0.269755 3_3:-3454923 Msa0438680:intron
GCCATTATTACTGCCATTTA+GGG 0.276747 3_3:+3457122 None:intergenic
GGCTCAAAGCAAGCTGTTAA+TGG 0.283062 3_3:-3456813 Msa0438680:CDS
ATTCAATGCCTTATTGATCT+TGG 0.300157 3_3:-3453940 Msa0438680:CDS
TATTGAGGCGTACTTGATTC+AGG 0.305517 3_3:-3454642 Msa0438680:intron
GAAATGCCGCCATCAAAATT+AGG 0.325630 3_3:-3456924 Msa0438680:CDS
ACCCTAAATGGCAGTAATAA+TGG 0.329958 3_3:-3457123 Msa0438680:exon
TCTTTAAACAATTCATTAAT+GGG 0.331071 3_3:+3456049 None:intergenic
GCTACTATGTACACGGTATT+AGG 0.336158 3_3:-3452124 Msa0438680:CDS
AGCTGTTAATGGAGCAAGTT+TGG 0.341642 3_3:-3456802 Msa0438680:CDS
CAATGCAAAATGGGCATATC+CGG 0.342054 3_3:-3456583 Msa0438680:CDS
GAGCAGACATTGTCTGCAAT+TGG 0.346799 3_3:-3453726 Msa0438680:CDS
TTCGTTGTCTTTGTCAATGC+TGG 0.352992 3_3:+3456762 None:intergenic
CCAATGAAAATTACAGTTCC+TGG 0.383016 3_3:-3456665 Msa0438680:CDS
TTCAAGTGGTGGAAGTTCAT+TGG 0.384033 3_3:+3456728 None:intergenic
TAATGGTAGAGCTGTTAAAA+TGG 0.385147 3_3:-3456898 Msa0438680:CDS
TCAATTATTTATTACGACTT+TGG 0.385780 3_3:-3454448 Msa0438680:CDS
CCATCAAAATTAGGTAATAA+TGG 0.389209 3_3:-3456915 Msa0438680:CDS
TACGGTATAAACACGACAAA+AGG 0.394062 3_3:+3458093 None:intergenic
TTTGGCATCCTTCTCATAAA+CGG 0.395475 3_3:+3454369 None:intergenic
ACAGATCCCCGGTGGGTTGG+AGG 0.397963 3_3:+3453914 None:intergenic
AGCAGACATTGTCTGCAATT+GGG 0.399926 3_3:-3453725 Msa0438680:CDS
TCTATTTCCCCGTGAATTTG+TGG 0.401899 3_3:-3456272 Msa0438680:CDS
ATCTTCACAAATGAGAAATC+TGG 0.404363 3_3:+3452797 None:intergenic
TTTCAGAGAAGTGAAACTTT+TGG 0.408412 3_3:-3455447 Msa0438680:CDS
TTGGTGGTCCAACTAGAGAT+TGG 0.412828 3_3:-3455428 Msa0438680:CDS
ATAACAAAGGTGAAGGTTGA+TGG 0.416877 3_3:+3453567 None:intergenic
CGAAGATCACTAGACAATCT+TGG 0.421184 3_3:-3457056 Msa0438680:CDS
CCGAGACTTGCAGCAGCAAT+TGG 0.421258 3_3:+3456013 None:intergenic
ACATCAATAGCAAGATTTCC+AGG 0.425680 3_3:+3454478 None:intergenic
GTCCTCCTAGTGGGTCCTCT+TGG 0.429327 3_3:-3457974 Msa0438680:five_prime_UTR
GGAAGTTCATTGGAGATTGT+AGG 0.432975 3_3:+3456738 None:intergenic
GACAATGTCTGCTCTTGATC+TGG 0.434915 3_3:+3453735 None:intergenic
TAGCACAAGACCAGCCATTC+CGG 0.440262 3_3:-3453593 Msa0438680:CDS
TTTCACGCTGATCCACATCC+TGG 0.442896 3_3:-3454496 Msa0438680:CDS
CTCCTAGTGGGTCCTCTTGG+AGG 0.443022 3_3:-3457971 Msa0438680:five_prime_UTR
GAAGGAGGAAAACGGCTTCA+TGG 0.444251 3_3:-3456366 Msa0438680:CDS
TGTCCAAGTTTAATAAAAGT+TGG 0.444282 3_3:+3456316 None:intergenic
TCTATTCTTTGAACTCTCAA+TGG 0.445983 3_3:+3452426 None:intergenic
CCACAGGGCCACAACTCGTT+GGG 0.452590 3_3:-3452643 Msa0438680:CDS
GAAATTGATTATATAAATGA+AGG 0.452977 3_3:-3455187 Msa0438680:CDS
TTATGAGAAGGATGCCAAAA+AGG 0.452978 3_3:-3454365 Msa0438680:intron
AGGTGAAGGTTGATGGAAAC+CGG 0.458214 3_3:+3453574 None:intergenic
GGAGGGCTCCAAGATCAATA+AGG 0.466597 3_3:+3453932 None:intergenic
TATTACGACTTTGGCATGAT+GGG 0.468315 3_3:-3454439 Msa0438680:CDS
CCAATTGCTGCTGCAAGTCT+CGG 0.469478 3_3:-3456013 Msa0438680:CDS
GGATGAACTCGCAAAATTGC+AGG 0.471584 3_3:-3456251 Msa0438680:intron
TGCTGCTGCAAGTCTCGGTC+AGG 0.471750 3_3:-3456008 Msa0438680:CDS
GTGTTACAGATATTGAAAAC+AGG 0.473505 3_3:-3454523 Msa0438680:intron
CCTCAGATGAAGGCTTCAGT+TGG 0.474873 3_3:-3456689 Msa0438680:CDS
TTGGGATTATACAGCAATGA+AGG 0.474937 3_3:-3454905 Msa0438680:CDS
TCTTGCTTCCACGTTACAAA+AGG 0.479209 3_3:+3457999 None:intergenic
CGAGTTCATCCACAAATTCA+CGG 0.480904 3_3:+3456263 None:intergenic
TCTGCTCTTGATCTGGTGAC+TGG 0.488384 3_3:+3453742 None:intergenic
CAGATCCCCGGTGGGTTGGA+GGG 0.491136 3_3:+3453915 None:intergenic
TCCTAGTGGGTCCTCTTGGA+GGG 0.493209 3_3:-3457970 Msa0438680:five_prime_UTR
TTTGTGAAGCAAGTTGAGGC+AGG 0.494683 3_3:-3452399 Msa0438680:CDS
GTTATCAAAGTTCAAAGGCC+TGG 0.495296 3_3:-3455950 Msa0438680:CDS
GGAAAACGGCTTCATGGCTA+AGG 0.498904 3_3:-3456360 Msa0438680:CDS
GATAAGCAGAAGGAGGAAAA+CGG 0.502499 3_3:-3456374 Msa0438680:CDS
TAAAGCCTCTTGCTTTCTGT+GGG 0.502807 3_3:+3456092 None:intergenic
TTGATGGAAACCGGAATGGC+TGG 0.509916 3_3:+3453583 None:intergenic
ATGAAGGGAAGAATGCTGAT+AGG 0.512805 3_3:-3455171 Msa0438680:CDS
CTGACAGATCCCCGGTGGGT+TGG 0.513021 3_3:+3453911 None:intergenic
TGGTAAATTTCGTAGATTTG+TGG 0.513813 3_3:-3456964 Msa0438680:CDS
CTTGGAGCCCTCCAACCCAC+CGG 0.514456 3_3:-3453922 Msa0438680:CDS
ACAGTCTGAACCTGTGCATA+GGG 0.514489 3_3:+3452767 None:intergenic
CCAACGAGTTGTGGCCCTGT+GGG 0.514599 3_3:+3452644 None:intergenic
AATCTCATCACGTGCTATTG+AGG 0.516579 3_3:-3454657 Msa0438680:CDS
TTGGAGCCCTCCAACCCACC+GGG 0.517854 3_3:-3453921 Msa0438680:CDS
GCTTTCTGTGGGGAGAAAGC+AGG 0.519217 3_3:+3456103 None:intergenic
ATAGCAAGATTTCCAGGATG+TGG 0.519629 3_3:+3454484 None:intergenic
GGCAGAGATCAATTGATGTA+TGG 0.520886 3_3:-3456644 Msa0438680:CDS
GTCTCCACTTTATTCTCTGA+CGG 0.521771 3_3:+3456843 None:intergenic
ATTGAGAGTTCAAAGAATAG+AGG 0.523885 3_3:-3452424 Msa0438680:CDS
CTCAGATGAAGGCTTCAGTT+GGG 0.526088 3_3:-3456688 Msa0438680:CDS
ATACCGATCCAATCTCTAGT+TGG 0.528498 3_3:+3455420 None:intergenic
TTATTGTAACAATATAGAAT+CGG 0.529878 3_3:-3457087 Msa0438680:CDS
GAGTTCATCCACAAATTCAC+GGG 0.530269 3_3:+3456264 None:intergenic
GCTATCTGCCCAACGAGTTG+TGG 0.530477 3_3:+3452635 None:intergenic
TTATTACGACTTTGGCATGA+TGG 0.530731 3_3:-3454440 Msa0438680:CDS
TAAATTTCGTAGATTTGTGG+TGG 0.532222 3_3:-3456961 Msa0438680:CDS
TTGACCTTGGAGTATGTACC+AGG 0.532309 3_3:-3454880 Msa0438680:intron
GCAGACATTGTCTGCAATTG+GGG 0.533585 3_3:-3453724 Msa0438680:CDS
GTCTTTGTCAATGCTGGAGT+AGG 0.534650 3_3:+3456768 None:intergenic
ATAAAGCCTCTTGCTTTCTG+TGG 0.536314 3_3:+3456091 None:intergenic
AACTCTCAATGGCATTGACA+TGG 0.538554 3_3:+3452437 None:intergenic
ACGGTATAAACACGACAAAA+GGG 0.539286 3_3:+3458094 None:intergenic
CCCACAGGGCCACAACTCGT+TGG 0.543204 3_3:-3452644 Msa0438680:CDS
TTCTCCCCACAGAAAGCAAG+AGG 0.547830 3_3:-3456097 Msa0438680:CDS
TGCTCTAATAACAAAGGTGA+AGG 0.550545 3_3:+3453560 None:intergenic
AATAAAGTGGAGACAGTCAA+TGG 0.556563 3_3:-3456834 Msa0438680:CDS
AGCAATGAAGGTGTTGACCT+TGG 0.557273 3_3:-3454893 Msa0438680:CDS
CCAACTGAAGCCTTCATCTG+AGG 0.557528 3_3:+3456689 None:intergenic
ATAAATTGTCAAAGAATGAA+AGG 0.558325 3_3:-3457010 Msa0438680:CDS
CAACTGAAGCCTTCATCTGA+GGG 0.559152 3_3:+3456690 None:intergenic
AATGCAAAATGGGCATATCC+GGG 0.559374 3_3:-3456582 Msa0438680:CDS
GACACCGTCAGAGAATAAAG+TGG 0.563292 3_3:-3456847 Msa0438680:CDS
GAAAGCGACAGTGTTACAAA+TGG 0.563568 3_3:-3452146 Msa0438680:CDS
GACAGTCTGAACCTGTGCAT+AGG 0.566917 3_3:+3452766 None:intergenic
CAGTTCGAGCAATCTCTCAC+GGG 0.571404 3_3:+3454399 None:intergenic
ATTACGACTTTGGCATGATG+GGG 0.574785 3_3:-3454438 Msa0438680:CDS
TAGAGCTGTTAAAATGGTAC+CGG 0.578175 3_3:-3456892 Msa0438680:CDS
CCCAACGAGTTGTGGCCCTG+TGG 0.579556 3_3:+3452643 None:intergenic
TACATCAATTGATCTCTGCC+AGG 0.581512 3_3:+3456647 None:intergenic
AGGTATTAAAATAAATCAAG+TGG 0.581716 3_3:-3454714 Msa0438680:CDS
ACAAAAGGTGTAAGAACAAG+TGG 0.584929 3_3:+3458014 None:intergenic
TGGCTTCACAGAAGAAAAGC+AGG 0.586577 3_3:-3456559 Msa0438680:intron
CAAGTGGTTGAACTTGAACA+TGG 0.587413 3_3:+3458030 None:intergenic
ATAAGGCAACGACAGCCCAC+AGG 0.588619 3_3:-3452659 Msa0438680:CDS
AGCAAGAACGTCCTCCTAGT+GGG 0.590428 3_3:-3457983 Msa0438680:five_prime_UTR
ACAGTTCGAGCAATCTCTCA+CGG 0.590615 3_3:+3454398 None:intergenic
GATTGCTGCACCCTATGCAC+AGG 0.591848 3_3:-3452777 Msa0438680:intron
TCTAGTCTGAAAGAGCTGCT+CGG 0.594593 3_3:-3452168 Msa0438680:intron
GTGGATACATTGACTTCTCG+TGG 0.595263 3_3:-3454695 Msa0438680:CDS
ACTATGTACACGGTATTAGG+AGG 0.601581 3_3:-3452121 Msa0438680:CDS
TGTTTAAAGAGTTTGAAGAT+CGG 0.606621 3_3:-3456036 Msa0438680:CDS
AAGTAGTTATCAAAGTTCAA+AGG 0.613460 3_3:-3455955 Msa0438680:CDS
AGGGAATCTGTATTACAGCT+CGG 0.617183 3_3:-3456340 Msa0438680:CDS
AGAAAATGCTCTAATAACAA+AGG 0.622886 3_3:+3453554 None:intergenic
CCTTACAGCTGACAGATCCC+CGG 0.625234 3_3:+3453903 None:intergenic
TACAGCTGACAGATCCCCGG+TGG 0.626173 3_3:+3453906 None:intergenic
AAATTGATTATATAAATGAA+GGG 0.628702 3_3:-3455186 Msa0438680:CDS
CTACCTCTAGTACTCGAACT+CGG 0.632492 3_3:+3452364 None:intergenic
GAAAGAAACATACAGGTACT+CGG 0.633321 3_3:+3455116 None:intergenic
ACATCTGATAAGTTAAAGAG+TGG 0.637198 3_3:-3456984 Msa0438680:CDS
TTACGACTTTGGCATGATGG+GGG 0.641403 3_3:-3454437 Msa0438680:CDS
CTCCAAGAGGACCCACTAGG+AGG 0.641568 3_3:+3457972 None:intergenic
ATAACCTGGTACATACTCCA+AGG 0.642881 3_3:+3454876 None:intergenic
ACTCCGAGTTCGAGTACTAG+AGG 0.643048 3_3:-3452367 Msa0438680:intron
GACATTGTCTGCAATTGGGG+AGG 0.644164 3_3:-3453721 Msa0438680:intron
AAGCAAGAACGTCCTCCTAG+TGG 0.646163 3_3:-3457984 Msa0438680:five_prime_UTR
TTGCATTGTCGAAAAGAACA+CGG 0.647652 3_3:+3456598 None:intergenic
ACAAATGGCTACTATGTACA+CGG 0.650955 3_3:-3452131 Msa0438680:CDS
GAAAACGGCTTCATGGCTAA+GGG 0.653245 3_3:-3456359 Msa0438680:CDS
ACCCTCCAAGAGGACCCACT+AGG 0.662964 3_3:+3457969 None:intergenic
GGAGTTTGTGAAGCAAGTTG+AGG 0.666870 3_3:-3452403 Msa0438680:CDS
AAGGTAGAAACATACCAGGA+GGG 0.668694 3_3:+3457932 None:intergenic
GCAGTAATAATGGCTTTGCA+TGG 0.669620 3_3:-3457113 Msa0438680:CDS
AATGACAGACACCCTCCAAG+AGG 0.672584 3_3:+3457959 None:intergenic
AAGGTTGATGGAAACCGGAA+TGG 0.675520 3_3:+3453579 None:intergenic
AGAAAACTTAAAGCTGATCG+CGG 0.679693 3_3:-3455475 Msa0438680:CDS
GACACGTAAAGAAAGAACAA+AGG 0.679744 3_3:+3456620 None:intergenic
TAAGGCAACGACAGCCCACA+GGG 0.682134 3_3:-3452658 Msa0438680:CDS
GGTCCAACTAGAGATTGGAT+CGG 0.683709 3_3:-3455423 Msa0438680:CDS
ACAGCTGACAGATCCCCGGT+GGG 0.686035 3_3:+3453907 None:intergenic
CATCGTGCAATTCTGCACAA+TGG 0.686650 3_3:-3455983 Msa0438680:CDS
AAAGCCTCTTGCTTTCTGTG+GGG 0.714944 3_3:+3456093 None:intergenic
TGGAGCCCTCCAACCCACCG+GGG 0.715980 3_3:-3453920 Msa0438680:CDS
GCAAAATGGGCATATCCGGG+TGG 0.723451 3_3:-3456579 Msa0438680:CDS
TTGGACAGTTATCATCAACA+AGG 0.723832 3_3:-3456300 Msa0438680:CDS
TTATGTTTCGAAAATCACGA+CGG 0.732189 3_3:+3455146 None:intergenic
AGTTCATCCACAAATTCACG+GGG 0.744511 3_3:+3456265 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCATCAAATTATTAAAA+GGG + chr3_3:3452388-3452407 None:intergenic 10.0%
!! AATTTCATCAAATTATTAAA+AGG + chr3_3:3452389-3452408 None:intergenic 10.0%
!!! TTTCTTTTAATAAATCAATT+AGG - chr3_3:3453755-3453774 Msa0438680:CDS 10.0%
!! AAATTGATTATATAAATGAA+GGG - chr3_3:3455020-3455039 Msa0438680:intron 10.0%
!! AAACAATACAAATATTTAAA+AGG + chr3_3:3455129-3455148 None:intergenic 10.0%
!!! GTTTTATTTTTAATGTGTTA+CGG + chr3_3:3452134-3452153 None:intergenic 15.0%
!!! TTATTGATTTTGTTAATGTT+TGG + chr3_3:3452156-3452175 None:intergenic 15.0%
!! TTTCATCAAATTATTAAAAG+GGG + chr3_3:3452387-3452406 None:intergenic 15.0%
!! GAAAATCAATCAATATAATT+TGG + chr3_3:3452749-3452768 None:intergenic 15.0%
!! ATAAGAGAAATAAATTGTAA+AGG + chr3_3:3453033-3453052 None:intergenic 15.0%
!!! TGTTCATATTGATTTTTTAT+AGG - chr3_3:3453053-3453072 Msa0438680:intron 15.0%
!! TTATTGTAACAATATAGAAT+CGG - chr3_3:3453119-3453138 Msa0438680:intron 15.0%
!! TTTATTTAGTGTATTAAACT+TGG - chr3_3:3454026-3454045 Msa0438680:intron 15.0%
!! TCTTTAAACAATTCATTAAT+GGG + chr3_3:3454160-3454179 None:intergenic 15.0%
!! CATTTATATAATCAATTTCT+TGG + chr3_3:3455018-3455037 None:intergenic 15.0%
!! GAAATTGATTATATAAATGA+AGG - chr3_3:3455019-3455038 Msa0438680:intron 15.0%
!!! CTTTAATTTTAAAGAAAACA+AGG + chr3_3:3455376-3455395 None:intergenic 15.0%
!!! TTATTTGATTTTTTTTTTCC+CGG - chr3_3:3455465-3455484 Msa0438680:CDS 15.0%
!! CTTTATTAGAATAGATAATT+AGG + chr3_3:3456102-3456121 None:intergenic 15.0%
!! CTAATTATCTATTCTAATAA+AGG - chr3_3:3456100-3456119 Msa0438680:CDS 15.0%
!! AAATTTATAAGATAGAGATA+TGG + chr3_3:3456386-3456405 None:intergenic 15.0%
!!! AATTTCATAATTTGATTTTC+AGG - chr3_3:3456401-3456420 Msa0438680:intron 15.0%
!!! ACTTGAATATTTAATTCTTT+TGG - chr3_3:3456509-3456528 Msa0438680:intron 15.0%
!!! TTATTATTGATGGAATTTTT+TGG - chr3_3:3456574-3456593 Msa0438680:CDS 15.0%
!! AAGAAACAAATAAGAAAATA+GGG + chr3_3:3456900-3456919 None:intergenic 15.0%
!! AAAGAAACAAATAAGAAAAT+AGG + chr3_3:3456901-3456920 None:intergenic 15.0%
!!! TTCAACTTATTTTTTCTTAT+TGG - chr3_3:3457996-3458015 Msa0438680:five_prime_UTR 15.0%
!! TGAACTTTATCTTAGATAAT+TGG + chr3_3:3452541-3452560 None:intergenic 20.0%
!! AACGTATTAACATATTCAAA+TGG + chr3_3:3452703-3452722 None:intergenic 20.0%
!!! TGAATATGTTAATACGTTTT+TGG - chr3_3:3452705-3452724 Msa0438680:intron 20.0%
!!! ATTTTACAAGATATAACAAC+CGG + chr3_3:3452885-3452904 None:intergenic 20.0%
!! ATAAATTGTCAAAGAATGAA+AGG - chr3_3:3453196-3453215 Msa0438680:intron 20.0%
!! CTCTTTAAACAATTCATTAA+TGG + chr3_3:3454161-3454180 None:intergenic 20.0%
!!! ATATATGATTAATTTTGCTG+AGG + chr3_3:3454426-3454445 None:intergenic 20.0%
!!! ACAACTAAGTTTTATATACA+TGG - chr3_3:3454559-3454578 Msa0438680:intron 20.0%
!! TAGAGATTGGAAATTTATAA+AGG + chr3_3:3455225-3455244 None:intergenic 20.0%
!! TATGCGGTTAATATTAAAAT+TGG + chr3_3:3455251-3455270 None:intergenic 20.0%
!!! TATTTGATTTTTTTTTTCCC+GGG - chr3_3:3455466-3455485 Msa0438680:CDS 20.0%
!! AGGTATTAAAATAAATCAAG+TGG - chr3_3:3455492-3455511 Msa0438680:intron 20.0%
!! TCAATTATTTATTACGACTT+TGG - chr3_3:3455758-3455777 Msa0438680:intron 20.0%
!! AAAGTTTAAGTAAATGTGAA+AGG + chr3_3:3456225-3456244 None:intergenic 20.0%
!!! AGTTTTAATCTTTTACAAGA+TGG - chr3_3:3456335-3456354 Msa0438680:CDS 20.0%
!!! TATGGCAATTTTATTATTGA+TGG - chr3_3:3456564-3456583 Msa0438680:CDS 20.0%
!! AGAAACAAATAAGAAAATAG+GGG + chr3_3:3456899-3456918 None:intergenic 20.0%
!! TGAGAAAAAACTATTAAAGT+AGG - chr3_3:3457127-3457146 Msa0438680:exon 20.0%
!!! GTGAAGCATTATTTTAATTA+TGG - chr3_3:3457687-3457706 Msa0438680:intron 20.0%
!!! AGAAAAAATAAGTTGAAGAA+TGG + chr3_3:3457993-3458012 None:intergenic 20.0%
! TTGTGAATGACTTAAATTCA+AGG - chr3_3:3452480-3452499 Msa0438680:intron 25.0%
!!! ACCTTTTTAAGAGTAAGATA+TGG - chr3_3:3452658-3452677 Msa0438680:CDS 25.0%
! GGTTGTTATATCTTGTAAAA+TGG - chr3_3:3452884-3452903 Msa0438680:intron 25.0%
!!! TTATTACCTAATTTTGATGG+CGG + chr3_3:3453291-3453310 None:intergenic 25.0%
!! CCATTATTACCTAATTTTGA+TGG + chr3_3:3453294-3453313 None:intergenic 25.0%
! CCATCAAAATTAGGTAATAA+TGG - chr3_3:3453291-3453310 Msa0438680:intron 25.0%
! TAAATCAATTAGGTTTCTGT+TGG - chr3_3:3453765-3453784 Msa0438680:CDS 25.0%
! TGTCCAAGTTTAATAAAAGT+TGG + chr3_3:3453893-3453912 None:intergenic 25.0%
! TTTAGTGTATTAAACTTGGT+TGG - chr3_3:3454030-3454049 Msa0438680:intron 25.0%
! TGTTTAAAGAGTTTGAAGAT+CGG - chr3_3:3454170-3454189 Msa0438680:intron 25.0%
! AAGTAGTTATCAAAGTTCAA+AGG - chr3_3:3454251-3454270 Msa0438680:intron 25.0%
! TTGTCTAATATTACGAAACT+TGG - chr3_3:3454458-3454477 Msa0438680:CDS 25.0%
! TACTATGATATCATCCAAAA+AGG - chr3_3:3454644-3454663 Msa0438680:CDS 25.0%
! ACTATGATATCATCCAAAAA+GGG - chr3_3:3454645-3454664 Msa0438680:CDS 25.0%
! TCAAACTTTAACATGTAATG+AGG + chr3_3:3454872-3454891 None:intergenic 25.0%
!! GTGCAAAGTATTAAAAATGA+TGG + chr3_3:3454941-3454960 None:intergenic 25.0%
!! TGATTTTCGAAACATAAAGT+GGG - chr3_3:3455066-3455085 Msa0438680:intron 25.0%
! TATATGAGACATGATTATGA+AGG + chr3_3:3455181-3455200 None:intergenic 25.0%
! CATAATCATGTCTCATATAT+TGG - chr3_3:3455182-3455201 Msa0438680:CDS 25.0%
! TTAAAATTGGAGTTAGAGAT+TGG + chr3_3:3455238-3455257 None:intergenic 25.0%
! CTTCAAGGAAATAAAGTTAT+TGG + chr3_3:3455399-3455418 None:intergenic 25.0%
!!! TTTATTTTAATACCTGTTCC+CGG + chr3_3:3455487-3455506 None:intergenic 25.0%
! TATTAGATACACTTTCAGAT+AGG + chr3_3:3455603-3455622 None:intergenic 25.0%
! GTTGAATATATTCATCTGAT+CGG - chr3_3:3455629-3455648 Msa0438680:intron 25.0%
!! TTGATTGTTGATAAGCTATT+AGG - chr3_3:3455947-3455966 Msa0438680:CDS 25.0%
!!! GACAGATTTTTGCTATAATT+CGG + chr3_3:3456080-3456099 None:intergenic 25.0%
! CATAAATTCTGCAGATAATT+CGG + chr3_3:3456548-3456567 None:intergenic 25.0%
! AGAAAATGCTCTAATAACAA+AGG + chr3_3:3456655-3456674 None:intergenic 25.0%
! TTACTTTAAATGAGGTACAA+AGG + chr3_3:3456729-3456748 None:intergenic 25.0%
!! CATATACGATATACCAATTT+TGG + chr3_3:3456782-3456801 None:intergenic 25.0%
!! AGAACTTTTCAATTTCCTTT+TGG + chr3_3:3456865-3456884 None:intergenic 25.0%
!!! AATAAGAAAATAGGGGTATT+GGG + chr3_3:3456892-3456911 None:intergenic 25.0%
!! AAATAAGAAAATAGGGGTAT+TGG + chr3_3:3456893-3456912 None:intergenic 25.0%
! CCATTAAACCTATATTTCAT+GGG + chr3_3:3457034-3457053 None:intergenic 25.0%
! TCCATTAAACCTATATTTCA+TGG + chr3_3:3457035-3457054 None:intergenic 25.0%
! ATATCCCAAATTATTTACCT+TGG - chr3_3:3457163-3457182 Msa0438680:intron 25.0%
! TGAGTTAAAGTGTATCTAAA+TGG + chr3_3:3457284-3457303 None:intergenic 25.0%
! AACTCATTTACACAATAACA+CGG - chr3_3:3457298-3457317 Msa0438680:intron 25.0%
! ATTACAAAACAAACATCATC+TGG + chr3_3:3457654-3457673 None:intergenic 25.0%
!! ACATTAAATTACGTCTTGTT+TGG - chr3_3:3457926-3457945 Msa0438680:intron 25.0%
!! TGATCATTGAGTTGAAAGAA+AGG + chr3_3:3452578-3452597 None:intergenic 30.0%
CTTAGTTCAATTAGACAACA+TGG - chr3_3:3452606-3452625 Msa0438680:intron 30.0%
!! TGGTTAGTTTACTATTGTAC+TGG - chr3_3:3452626-3452645 Msa0438680:CDS 30.0%
GCCATATCTTACTCTTAAAA+AGG + chr3_3:3452662-3452681 None:intergenic 30.0%
! TAGCTAGAGTTTAGAATCAT+TGG - chr3_3:3452769-3452788 Msa0438680:intron 30.0%
! AGCTAGAGTTTAGAATCATT+GGG - chr3_3:3452770-3452789 Msa0438680:intron 30.0%
TTAGGGGTAATCTTGTAAAT+TGG - chr3_3:3452842-3452861 Msa0438680:intron 30.0%
TCTTGTTAGAATTAGAACAC+TGG + chr3_3:3453000-3453019 None:intergenic 30.0%
ATAGGTATCATTACCCTAAA+TGG - chr3_3:3453071-3453090 Msa0438680:intron 30.0%
ACATCTGATAAGTTAAAGAG+TGG - chr3_3:3453222-3453241 Msa0438680:intron 30.0%
TGGTAAATTTCGTAGATTTG+TGG - chr3_3:3453242-3453261 Msa0438680:intron 30.0%
TAAATTTCGTAGATTTGTGG+TGG - chr3_3:3453245-3453264 Msa0438680:intron 30.0%
TAATGGTAGAGCTGTTAAAA+TGG - chr3_3:3453308-3453327 Msa0438680:intron 30.0%
!!! AAAACTTTTAGCTCTTCAAG+TGG + chr3_3:3453495-3453514 None:intergenic 30.0%
! TTCTTTTCGACAATGCAAAA+TGG - chr3_3:3453613-3453632 Msa0438680:intron 30.0%
! TCTTTTCGACAATGCAAAAT+GGG - chr3_3:3453614-3453633 Msa0438680:intron 30.0%
! TTGCATTTTAGATAAGCAGA+AGG - chr3_3:3453822-3453841 Msa0438680:intron 30.0%
! GGTCCAACTTTTATTAAACT+TGG - chr3_3:3453887-3453906 Msa0438680:intron 30.0%
!! GTCAATATTTTCAAGCTCAT+TGG - chr3_3:3453996-3454015 Msa0438680:intron 30.0%
TTCTCGATATAACATTCTTC+AGG - chr3_3:3454072-3454091 Msa0438680:intron 30.0%
ATATAACATTCTTCAGGACA+AGG - chr3_3:3454078-3454097 Msa0438680:intron 30.0%
CGTTAGTATCATGTTTAAGA+TGG - chr3_3:3454369-3454388 Msa0438680:CDS 30.0%
! TCATGTTTAAGATGGATCTA+AGG - chr3_3:3454377-3454396 Msa0438680:CDS 30.0%
TATCTGGTCTAGTTATTGTA+AGG - chr3_3:3454621-3454640 Msa0438680:intron 30.0%
! TTTCAGAGAAGTGAAACTTT+TGG - chr3_3:3454759-3454778 Msa0438680:intron 30.0%
CTTTAACATGTAATGAGGTA+AGG + chr3_3:3454867-3454886 None:intergenic 30.0%
! AAAGTTTGAGCAACTCTTTT+TGG - chr3_3:3454883-3454902 Msa0438680:CDS 30.0%
! AAGTTTGAGCAACTCTTTTT+GGG - chr3_3:3454884-3454903 Msa0438680:CDS 30.0%
TTATGTTTCGAAAATCACGA+CGG + chr3_3:3455063-3455082 None:intergenic 30.0%
! GTGATTTTCGAAACATAAAG+TGG - chr3_3:3455065-3455084 Msa0438680:intron 30.0%
TATTGCAGAAAGAAACATAC+AGG + chr3_3:3455100-3455119 None:intergenic 30.0%
TCAGAGTAAATCAAGTTTCA+AGG + chr3_3:3455158-3455177 None:intergenic 30.0%
TTGATAGAAACAACACTTCA+AGG + chr3_3:3455414-3455433 None:intergenic 30.0%
ATAAGAGCAATTATGAATCC+AGG + chr3_3:3455449-3455468 None:intergenic 30.0%
!!! TTATTTTAATACCTGTTCCC+GGG + chr3_3:3455486-3455505 None:intergenic 30.0%
GTGTTACAGATATTGAAAAC+AGG - chr3_3:3455683-3455702 Msa0438680:intron 30.0%
!! GTTTTATTCCGTTTATGAGA+AGG - chr3_3:3455829-3455848 Msa0438680:intron 30.0%
! TGAAAGAAACTAGACCTTTT+TGG + chr3_3:3455858-3455877 None:intergenic 30.0%
! ATTCAATGCCTTATTGATCT+TGG - chr3_3:3456266-3456285 Msa0438680:CDS 30.0%
!!! CATAATTTGATTTTCAGGTG+AGG - chr3_3:3456406-3456425 Msa0438680:intron 30.0%
! GAGATCTGTACAATTTTTCT+TGG - chr3_3:3456428-3456447 Msa0438680:intron 30.0%
CGAATTATCTGCAGAATTTA+TGG - chr3_3:3456546-3456565 Msa0438680:intron 30.0%
!!! TATTGATGGAATTTTTTGGC+AGG - chr3_3:3456578-3456597 Msa0438680:CDS 30.0%
! ACCTCATTTAAAGTAAGCTA+AGG - chr3_3:3456733-3456752 Msa0438680:CDS 30.0%
ACCTTAGCTTACTTTAAATG+AGG + chr3_3:3456737-3456756 None:intergenic 30.0%
!! ATATACCAATTTTGGTATGC+CGG + chr3_3:3456774-3456793 None:intergenic 30.0%
TATTGGCAATGAAACATGAT+TGG - chr3_3:3456958-3456977 Msa0438680:CDS 30.0%
! CCTATTGTTCTTTTCTTTCT+CGG + chr3_3:3456995-3457014 None:intergenic 30.0%
AGAAAAGAACAATAGGATGT+AGG - chr3_3:3456999-3457018 Msa0438680:CDS 30.0%
TAAACCTATATTTCATGGGA+TGG + chr3_3:3457030-3457049 None:intergenic 30.0%
CCCATGAAATATAGGTTTAA+TGG - chr3_3:3457031-3457050 Msa0438680:CDS 30.0%
! AATCATGCCTTATACTGATT+TGG + chr3_3:3457061-3457080 None:intergenic 30.0%
AAATCAGTATAAGGCATGAT+TGG - chr3_3:3457060-3457079 Msa0438680:CDS 30.0%
GACACCAAGGTAAATAATTT+GGG + chr3_3:3457170-3457189 None:intergenic 30.0%
TGACACCAAGGTAAATAATT+TGG + chr3_3:3457171-3457190 None:intergenic 30.0%
ACTCATTTACACAATAACAC+GGG - chr3_3:3457299-3457318 Msa0438680:intron 30.0%
! TGACTTTTTATTCTTCTGAC+AGG - chr3_3:3457367-3457386 Msa0438680:intron 30.0%
ATCTTCACAAATGAGAAATC+TGG + chr3_3:3457412-3457431 None:intergenic 30.0%
!! ATAGCATTTTAACCGAGAAT+GGG + chr3_3:3457483-3457502 None:intergenic 30.0%
! TATATCATGCATGCTTTTAC+AGG - chr3_3:3457513-3457532 Msa0438680:intron 30.0%
TACAGGAACTTCTAGATATA+AGG - chr3_3:3457530-3457549 Msa0438680:intron 30.0%
AAAGCTTAAATGAAAGTTCC+AGG + chr3_3:3457626-3457645 None:intergenic 30.0%
ACTAGAATTAACAAGTCTCA+CGG - chr3_3:3457722-3457741 Msa0438680:intron 30.0%
TCTATTCTTTGAACTCTCAA+TGG + chr3_3:3457783-3457802 None:intergenic 30.0%
ATTGAGAGTTCAAAGAATAG+AGG - chr3_3:3457782-3457801 Msa0438680:intron 30.0%
ACGGTATAAACACGACAAAA+GGG + chr3_3:3452115-3452134 None:intergenic 35.0%
TACGGTATAAACACGACAAA+AGG + chr3_3:3452116-3452135 None:intergenic 35.0%
! ACAAAAGGTGTAAGAACAAG+TGG + chr3_3:3452195-3452214 None:intergenic 35.0%
! TTCTTACACCTTTTGTAACG+TGG - chr3_3:3452199-3452218 Msa0438680:intron 35.0%
AAGAAAGGTAGAAACATACC+AGG + chr3_3:3452281-3452300 None:intergenic 35.0%
GAGAAGAAGAAGAAGAAGAA+AGG + chr3_3:3452296-3452315 None:intergenic 35.0%
TTCCATAAGTTATCTCGACT+GGG - chr3_3:3452345-3452364 Msa0438680:intron 35.0%
TTAAGAGTAAGATATGGCAG+TGG - chr3_3:3452664-3452683 Msa0438680:CDS 35.0%
GAGTATGACTCATAGTAGTT+AGG - chr3_3:3452796-3452815 Msa0438680:CDS 35.0%
GAACTGTCATGTACAGTTTA+GGG - chr3_3:3452825-3452844 Msa0438680:intron 35.0%
AACTGTCATGTACAGTTTAG+GGG - chr3_3:3452826-3452845 Msa0438680:intron 35.0%
CAACCGGTGTTTAAATACTA+CGG + chr3_3:3452869-3452888 None:intergenic 35.0%
CGAAATTTGATCATGGAACT+CGG + chr3_3:3452935-3452954 None:intergenic 35.0%
ACCCTAAATGGCAGTAATAA+TGG - chr3_3:3453083-3453102 Msa0438680:intron 35.0%
! GCCATTATTACTGCCATTTA+GGG + chr3_3:3453087-3453106 None:intergenic 35.0%
! AGCCATTATTACTGCCATTT+AGG + chr3_3:3453088-3453107 None:intergenic 35.0%
TAGAGCTGTTAAAATGGTAC+CGG - chr3_3:3453314-3453333 Msa0438680:intron 35.0%
AATAAAGTGGAGACAGTCAA+TGG - chr3_3:3453372-3453391 Msa0438680:intron 35.0%
! CCAGGAACTGTAATTTTCAT+TGG + chr3_3:3453544-3453563 None:intergenic 35.0%
CCAATGAAAATTACAGTTCC+TGG - chr3_3:3453541-3453560 Msa0438680:intron 35.0%
GACACGTAAAGAAAGAACAA+AGG + chr3_3:3453589-3453608 None:intergenic 35.0%
TTGCATTGTCGAAAAGAACA+CGG + chr3_3:3453611-3453630 None:intergenic 35.0%
! TTTTCTGAACTCTAACTAGC+TGG - chr3_3:3453686-3453705 Msa0438680:intron 35.0%
! CATTTTAGATAAGCAGAAGG+AGG - chr3_3:3453825-3453844 Msa0438680:intron 35.0%
TTGGACAGTTATCATCAACA+AGG - chr3_3:3453906-3453925 Msa0438680:intron 35.0%
!! GGCTTTATTGAGAGTGAATT+AGG - chr3_3:3454130-3454149 Msa0438680:intron 35.0%
TCAAAAAGCTTCTTCAAACC+AGG + chr3_3:3454277-3454296 None:intergenic 35.0%
AACATCACAAGATGTGCAAA+TGG + chr3_3:3454336-3454355 None:intergenic 35.0%
AAGGATTTCTGAATTGCTAG+AGG - chr3_3:3454396-3454415 Msa0438680:CDS 35.0%
TATGTCTTTCACAATCAGTG+TGG + chr3_3:3454603-3454622 None:intergenic 35.0%
CTGATTGTGAAAGACATATC+TGG - chr3_3:3454605-3454624 Msa0438680:intron 35.0%
AGAAAACTTAAAGCTGATCG+CGG - chr3_3:3454731-3454750 Msa0438680:intron 35.0%
GAAAGAAACATACAGGTACT+CGG + chr3_3:3455093-3455112 None:intergenic 35.0%
TTGGGATTATACAGCAATGA+AGG - chr3_3:3455301-3455320 Msa0438680:intron 35.0%
CACTATTCAAGATGATAACC+TGG + chr3_3:3455347-3455366 None:intergenic 35.0%
AATTATGAATCCAGGTTCAG+TGG + chr3_3:3455441-3455460 None:intergenic 35.0%
!!! ATTTTTTTTTTCCCGGGAAC+AGG - chr3_3:3455472-3455491 Msa0438680:CDS 35.0%
TACACTTTCAGATAGGAACA+AGG + chr3_3:3455596-3455615 None:intergenic 35.0%
ACATCAATAGCAAGATTTCC+AGG + chr3_3:3455731-3455750 None:intergenic 35.0%
TTATTACGACTTTGGCATGA+TGG - chr3_3:3455766-3455785 Msa0438680:intron 35.0%
TATTACGACTTTGGCATGAT+GGG - chr3_3:3455767-3455786 Msa0438680:intron 35.0%
TTTGGCATCCTTCTCATAAA+CGG + chr3_3:3455840-3455859 None:intergenic 35.0%
TTATGAGAAGGATGCCAAAA+AGG - chr3_3:3455841-3455860 Msa0438680:intron 35.0%
CATTACAAGAAGACACAAAC+AGG + chr3_3:3455992-3456011 None:intergenic 35.0%
TTCACATTCACACACACATT+AGG - chr3_3:3456029-3456048 Msa0438680:CDS 35.0%
ATAACAAAGGTGAAGGTTGA+TGG + chr3_3:3456642-3456661 None:intergenic 35.0%
TGCTCTAATAACAAAGGTGA+AGG + chr3_3:3456649-3456668 None:intergenic 35.0%
!! AGAGCATTTTCTACACTTGA+AGG - chr3_3:3456663-3456682 Msa0438680:CDS 35.0%
TTCATGCACATTAGAAGAGA+AGG + chr3_3:3456695-3456714 None:intergenic 35.0%
GGTATATCGTATATGTGAAG+AGG - chr3_3:3456787-3456806 Msa0438680:CDS 35.0%
TCTTTGTAAACCTTTCTGCA+CGG - chr3_3:3456916-3456935 Msa0438680:CDS 35.0%
TCATGAGGAAAGTAGTGTAT+TGG - chr3_3:3456941-3456960 Msa0438680:CDS 35.0%
CCGAGAAAGAAAAGAACAAT+AGG - chr3_3:3456992-3457011 Msa0438680:CDS 35.0%
AAAGAACAATAGGATGTAGG+TGG - chr3_3:3457002-3457021 Msa0438680:CDS 35.0%
TGGAACACCAAATCAGTATA+AGG - chr3_3:3457051-3457070 Msa0438680:CDS 35.0%
ATAACTACATGTCTAGCGTA+GGG + chr3_3:3457194-3457213 None:intergenic 35.0%
AATAACTACATGTCTAGCGT+AGG + chr3_3:3457195-3457214 None:intergenic 35.0%
TTTATTCTTCTGACAGGCAT+AGG - chr3_3:3457373-3457392 Msa0438680:intron 35.0%
TCAGTTATTGTTCCCATTCT+CGG - chr3_3:3457468-3457487 Msa0438680:intron 35.0%
!! CATAGCATTTTAACCGAGAA+TGG + chr3_3:3457484-3457503 None:intergenic 35.0%
GCATGTGAAGATGAAAGAAT+TGG + chr3_3:3457869-3457888 None:intergenic 35.0%
TCTTTCATCTTCACATGCTA+TGG - chr3_3:3457871-3457890 Msa0438680:intron 35.0%
ACAAATGGCTACTATGTACA+CGG - chr3_3:3458075-3458094 Msa0438680:five_prime_UTR 35.0%
GGAGGAACCTTTCTAAATAT+TGG - chr3_3:3458103-3458122 Msa0438680:five_prime_UTR 35.0%
CAAGTGGTTGAACTTGAACA+TGG + chr3_3:3452179-3452198 None:intergenic 40.0%
TCTTGCTTCCACGTTACAAA+AGG + chr3_3:3452210-3452229 None:intergenic 40.0%
AAGGTAGAAACATACCAGGA+GGG + chr3_3:3452277-3452296 None:intergenic 40.0%
AAAGGTAGAAACATACCAGG+AGG + chr3_3:3452278-3452297 None:intergenic 40.0%
CTTCCATAAGTTATCTCGAC+TGG - chr3_3:3452344-3452363 Msa0438680:intron 40.0%
TACCCAGTCGAGATAACTTA+TGG + chr3_3:3452350-3452369 None:intergenic 40.0%
CGAACTGTCATGTACAGTTT+AGG - chr3_3:3452824-3452843 Msa0438680:intron 40.0%
GGACCGTAGTATTTAAACAC+CGG - chr3_3:3452863-3452882 Msa0438680:intron 40.0%
GAACACGCGAAATTTGATCA+TGG + chr3_3:3452942-3452961 None:intergenic 40.0%
! GCAGTAATAATGGCTTTGCA+TGG - chr3_3:3453093-3453112 Msa0438680:intron 40.0%
CGAAGATCACTAGACAATCT+TGG - chr3_3:3453150-3453169 Msa0438680:intron 40.0%
GAAATGCCGCCATCAAAATT+AGG - chr3_3:3453282-3453301 Msa0438680:intron 40.0%
!! CTTTTTGCTATCTCAGTTGC+CGG + chr3_3:3453336-3453355 None:intergenic 40.0%
GTCTCCACTTTATTCTCTGA+CGG + chr3_3:3453366-3453385 None:intergenic 40.0%
AGCTGTTAATGGAGCAAGTT+TGG - chr3_3:3453404-3453423 Msa0438680:intron 40.0%
TTCGTTGTCTTTGTCAATGC+TGG + chr3_3:3453447-3453466 None:intergenic 40.0%
GGAAGTTCATTGGAGATTGT+AGG + chr3_3:3453471-3453490 None:intergenic 40.0%
! TTCAAGTGGTGGAAGTTCAT+TGG + chr3_3:3453481-3453500 None:intergenic 40.0%
!!! ACTTTTAGCTCTTCAAGTGG+TGG + chr3_3:3453492-3453511 None:intergenic 40.0%
! AAAGTTTTGCCCTCAGATGA+AGG - chr3_3:3453507-3453526 Msa0438680:intron 40.0%
TACATCAATTGATCTCTGCC+AGG + chr3_3:3453562-3453581 None:intergenic 40.0%
GGCAGAGATCAATTGATGTA+TGG - chr3_3:3453562-3453581 Msa0438680:CDS 40.0%
CAATGCAAAATGGGCATATC+CGG - chr3_3:3453623-3453642 Msa0438680:intron 40.0%
AATGCAAAATGGGCATATCC+GGG - chr3_3:3453624-3453643 Msa0438680:intron 40.0%
TTCACAGAAGAAAAGCAGGT+AGG - chr3_3:3453651-3453670 Msa0438680:intron 40.0%
! GAAGAAAAGCAGGTAGGTTT+TGG - chr3_3:3453657-3453676 Msa0438680:intron 40.0%
CTAGCTGGTAGAAAGTTTCT+CGG - chr3_3:3453701-3453720 Msa0438680:intron 40.0%
GATAAGCAGAAGGAGGAAAA+CGG - chr3_3:3453832-3453851 Msa0438680:intron 40.0%
AGGGAATCTGTATTACAGCT+CGG - chr3_3:3453866-3453885 Msa0438680:intron 40.0%
TCTATTTCCCCGTGAATTTG+TGG - chr3_3:3453934-3453953 Msa0438680:CDS 40.0%
AGTTCATCCACAAATTCACG+GGG + chr3_3:3453944-3453963 None:intergenic 40.0%
GAGTTCATCCACAAATTCAC+GGG + chr3_3:3453945-3453964 None:intergenic 40.0%
CGAGTTCATCCACAAATTCA+CGG + chr3_3:3453946-3453965 None:intergenic 40.0%
TAAAGCCTCTTGCTTTCTGT+GGG + chr3_3:3454117-3454136 None:intergenic 40.0%
ATAAAGCCTCTTGCTTTCTG+TGG + chr3_3:3454118-3454137 None:intergenic 40.0%
GTTATCAAAGTTCAAAGGCC+TGG - chr3_3:3454256-3454275 Msa0438680:intron 40.0%
!! CAAGCTTTAACGTCCCTTTT+TGG + chr3_3:3454661-3454680 None:intergenic 40.0%
CAAAAAGGGACGTTAAAGCT+TGG - chr3_3:3454659-3454678 Msa0438680:CDS 40.0%
!!! CAGCTTTAAGTTTTCTGGAC+AGG + chr3_3:3454727-3454746 None:intergenic 40.0%
!!! GCGATCAGCTTTAAGTTTTC+TGG + chr3_3:3454732-3454751 None:intergenic 40.0%
! CAGAGAAGTGAAACTTTTGG+TGG - chr3_3:3454762-3454781 Msa0438680:intron 40.0%
ATACCGATCCAATCTCTAGT+TGG + chr3_3:3454789-3454808 None:intergenic 40.0%
ATGAAGGGAAGAATGCTGAT+AGG - chr3_3:3455035-3455054 Msa0438680:intron 40.0%
! ACCCTTGTAGCTGGTTTATT+GGG - chr3_3:3455283-3455302 Msa0438680:intron 40.0%
TCCCAATAAACCAGCTACAA+GGG + chr3_3:3455287-3455306 None:intergenic 40.0%
ATCCCAATAAACCAGCTACA+AGG + chr3_3:3455288-3455307 None:intergenic 40.0%
ATAACCTGGTACATACTCCA+AGG + chr3_3:3455333-3455352 None:intergenic 40.0%
TATCAATATGCCACTGAACC+TGG - chr3_3:3455428-3455447 Msa0438680:CDS 40.0%
! AATCTCATCACGTGCTATTG+AGG - chr3_3:3455549-3455568 Msa0438680:intron 40.0%
TATTGAGGCGTACTTGATTC+AGG - chr3_3:3455564-3455583 Msa0438680:intron 40.0%
ATAGCAAGATTTCCAGGATG+TGG + chr3_3:3455725-3455744 None:intergenic 40.0%
ATTACGACTTTGGCATGATG+GGG - chr3_3:3455768-3455787 Msa0438680:intron 40.0%
CTTTCAATTGACAACGATGC+AGG - chr3_3:3456241-3456260 Msa0438680:intron 40.0%
AGCAGACATTGTCTGCAATT+GGG - chr3_3:3456481-3456500 Msa0438680:intron 40.0%
!! AATTTTGGTATGCCGGACTT+CGG + chr3_3:3456767-3456786 None:intergenic 40.0%
GAATATGAACCTAAGCTCGA+AGG - chr3_3:3456826-3456845 Msa0438680:CDS 40.0%
!! GGCTTGTTGCTTTAACCAAA+AGG - chr3_3:3456847-3456866 Msa0438680:CDS 40.0%
GGATCCATCCCATGAAATAT+AGG - chr3_3:3457023-3457042 Msa0438680:CDS 40.0%
! TTTGGGATATCTCTCACAAC+TGG + chr3_3:3457153-3457172 None:intergenic 40.0%
ATGATGTACCACACTTTACC+TGG - chr3_3:3457605-3457624 Msa0438680:intron 40.0%
TGAAAGTTCCAGGTAAAGTG+TGG + chr3_3:3457616-3457635 None:intergenic 40.0%
AAGTCTCACGGAACATTTGT+AGG - chr3_3:3457734-3457753 Msa0438680:intron 40.0%
!! AACTCTCAATGGCATTGACA+TGG + chr3_3:3457772-3457791 None:intergenic 40.0%
GAAAGCGACAGTGTTACAAA+TGG - chr3_3:3458060-3458079 Msa0438680:five_prime_UTR 40.0%
GCTACTATGTACACGGTATT+AGG - chr3_3:3458082-3458101 Msa0438680:five_prime_UTR 40.0%
ACTATGTACACGGTATTAGG+AGG - chr3_3:3458085-3458104 Msa0438680:five_prime_UTR 40.0%
!!! GTCTGTCATTTTTTCCCTCC+TGG - chr3_3:3452260-3452279 Msa0438680:intron 45.0%
CTCGGCTTACGAATGCATAA+TGG + chr3_3:3452917-3452936 None:intergenic 45.0%
GACACCGTCAGAGAATAAAG+TGG - chr3_3:3453359-3453378 Msa0438680:intron 45.0%
GGCTCAAAGCAAGCTGTTAA+TGG - chr3_3:3453393-3453412 Msa0438680:intron 45.0%
GTCTTTGTCAATGCTGGAGT+AGG + chr3_3:3453441-3453460 None:intergenic 45.0%
CAACTGAAGCCTTCATCTGA+GGG + chr3_3:3453519-3453538 None:intergenic 45.0%
CTCAGATGAAGGCTTCAGTT+GGG - chr3_3:3453518-3453537 Msa0438680:intron 45.0%
! TTTTCTTCTGTGAAGCCACC+CGG + chr3_3:3453645-3453664 None:intergenic 45.0%
TGGCTTCACAGAAGAAAAGC+AGG - chr3_3:3453647-3453666 Msa0438680:intron 45.0%
GAAAACGGCTTCATGGCTAA+GGG - chr3_3:3453847-3453866 Msa0438680:intron 45.0%
GGATGAACTCGCAAAATTGC+AGG - chr3_3:3453955-3453974 Msa0438680:intron 45.0%
AAAGCCTCTTGCTTTCTGTG+GGG + chr3_3:3454116-3454135 None:intergenic 45.0%
CATCGTGCAATTCTGCACAA+TGG - chr3_3:3454223-3454242 Msa0438680:intron 45.0%
GACAGGACAAGAAACTCGTT+AGG + chr3_3:3454710-3454729 None:intergenic 45.0%
! TTGGTGGTCCAACTAGAGAT+TGG - chr3_3:3454778-3454797 Msa0438680:intron 45.0%
GGTCCAACTAGAGATTGGAT+CGG - chr3_3:3454783-3454802 Msa0438680:intron 45.0%
!!! TCCTGCACATGCTACTTTTC+AGG - chr3_3:3454984-3455003 Msa0438680:intron 45.0%
TCCTGAAAAGTAGCATGTGC+AGG + chr3_3:3454988-3455007 None:intergenic 45.0%
GGGTGCAAATGAAGGATATG+CGG + chr3_3:3455267-3455286 None:intergenic 45.0%
! AGCTACAAGGGTGCAAATGA+AGG + chr3_3:3455275-3455294 None:intergenic 45.0%
TTCATTTGCACCCTTGTAGC+TGG - chr3_3:3455274-3455293 Msa0438680:intron 45.0%
! CACCCTTGTAGCTGGTTTAT+TGG - chr3_3:3455282-3455301 Msa0438680:intron 45.0%
!! AGCAATGAAGGTGTTGACCT+TGG - chr3_3:3455313-3455332 Msa0438680:intron 45.0%
TTGACCTTGGAGTATGTACC+AGG - chr3_3:3455326-3455345 Msa0438680:intron 45.0%
!! GTGGATACATTGACTTCTCG+TGG - chr3_3:3455511-3455530 Msa0438680:intron 45.0%
TTACGACTTTGGCATGATGG+GGG - chr3_3:3455769-3455788 Msa0438680:intron 45.0%
ACAGTTCGAGCAATCTCTCA+CGG + chr3_3:3455811-3455830 None:intergenic 45.0%
CCTCTTAGCTACCAATTCCA+GGG - chr3_3:3456197-3456216 Msa0438680:intron 45.0%
CTCTTAGCTACCAATTCCAG+GGG - chr3_3:3456198-3456217 Msa0438680:intron 45.0%
AGTAAATGTGAAAGGACCCC+TGG + chr3_3:3456217-3456236 None:intergenic 45.0%
GACAATGTCTGCTCTTGATC+TGG + chr3_3:3456474-3456493 None:intergenic 45.0%
GAGCAGACATTGTCTGCAAT+TGG - chr3_3:3456480-3456499 Msa0438680:intron 45.0%
GCAGACATTGTCTGCAATTG+GGG - chr3_3:3456482-3456501 Msa0438680:intron 45.0%
!! AAGGTTGATGGAAACCGGAA+TGG + chr3_3:3456630-3456649 None:intergenic 45.0%
!! AGGTGAAGGTTGATGGAAAC+CGG + chr3_3:3456635-3456654 None:intergenic 45.0%
GAAGTCCGGCATACCAAAAT+TGG - chr3_3:3456766-3456785 Msa0438680:CDS 45.0%
ACAGTCTGAACCTGTGCATA+GGG + chr3_3:3457442-3457461 None:intergenic 45.0%
GGAGTTTGTGAAGCAAGTTG+AGG - chr3_3:3457803-3457822 Msa0438680:intron 45.0%
! TTTGTGAAGCAAGTTGAGGC+AGG - chr3_3:3457807-3457826 Msa0438680:intron 45.0%
CTACCTCTAGTACTCGAACT+CGG + chr3_3:3457845-3457864 None:intergenic 45.0%
TCTAGTCTGAAAGAGCTGCT+CGG - chr3_3:3458038-3458057 Msa0438680:five_prime_UTR 45.0%
AAGCAAGAACGTCCTCCTAG+TGG - chr3_3:3452222-3452241 Msa0438680:intron 50.0%
AGCAAGAACGTCCTCCTAGT+GGG - chr3_3:3452223-3452242 Msa0438680:intron 50.0%
AATGACAGACACCCTCCAAG+AGG + chr3_3:3452250-3452269 None:intergenic 50.0%
CCAACTGAAGCCTTCATCTG+AGG + chr3_3:3453520-3453539 None:intergenic 50.0%
CCTCAGATGAAGGCTTCAGT+TGG - chr3_3:3453517-3453536 Msa0438680:intron 50.0%
GAAGGAGGAAAACGGCTTCA+TGG - chr3_3:3453840-3453859 Msa0438680:intron 50.0%
GGAAAACGGCTTCATGGCTA+AGG - chr3_3:3453846-3453865 Msa0438680:intron 50.0%
TTCTCCCCACAGAAAGCAAG+AGG - chr3_3:3454109-3454128 Msa0438680:intron 50.0%
CCAATTGCTGCTGCAAGTCT+CGG - chr3_3:3454193-3454212 Msa0438680:intron 50.0%
TTTCACGCTGATCCACATCC+TGG - chr3_3:3455710-3455729 Msa0438680:intron 50.0%
CAGTTCGAGCAATCTCTCAC+GGG + chr3_3:3455810-3455829 None:intergenic 50.0%
GCCTCTTAGCTACCAATTCC+AGG - chr3_3:3456196-3456215 Msa0438680:intron 50.0%
! CCCTGGAATTGGTAGCTAAG+AGG + chr3_3:3456200-3456219 None:intergenic 50.0%
TGTGAAAGGACCCCTGGAAT+TGG + chr3_3:3456211-3456230 None:intergenic 50.0%
GGAGGGCTCCAAGATCAATA+AGG + chr3_3:3456277-3456296 None:intergenic 50.0%
TCTGCTCTTGATCTGGTGAC+TGG + chr3_3:3456467-3456486 None:intergenic 50.0%
GACATTGTCTGCAATTGGGG+AGG - chr3_3:3456485-3456504 Msa0438680:intron 50.0%
TAGCACAAGACCAGCCATTC+CGG - chr3_3:3456613-3456632 Msa0438680:CDS 50.0%
TTGATGGAAACCGGAATGGC+TGG + chr3_3:3456626-3456645 None:intergenic 50.0%
AGCAACAAGCCTTCGAGCTT+AGG + chr3_3:3456838-3456857 None:intergenic 50.0%
CCTCATGAAACCGTGCAGAA+AGG + chr3_3:3456929-3456948 None:intergenic 50.0%
CCTTTCTGCACGGTTTCATG+AGG - chr3_3:3456926-3456945 Msa0438680:CDS 50.0%
GACAGTCTGAACCTGTGCAT+AGG + chr3_3:3457443-3457462 None:intergenic 50.0%
ACTCCGAGTTCGAGTACTAG+AGG - chr3_3:3457839-3457858 Msa0438680:intron 50.0%
CGAGTTCGAGTACTAGAGGT+AGG - chr3_3:3457843-3457862 Msa0438680:intron 50.0%
! TCCTAGTGGGTCCTCTTGGA+GGG - chr3_3:3452236-3452255 Msa0438680:intron 55.0%
GCAAAATGGGCATATCCGGG+TGG - chr3_3:3453627-3453646 Msa0438680:intron 55.0%
GCTTTCTGTGGGGAGAAAGC+AGG + chr3_3:3454106-3454125 None:intergenic 55.0%
CCGAGACTTGCAGCAGCAAT+TGG + chr3_3:3454196-3454215 None:intergenic 55.0%
CCTTACAGCTGACAGATCCC+CGG + chr3_3:3456306-3456325 None:intergenic 55.0%
AAGGTCAACCCACCGAAGTC+CGG - chr3_3:3456752-3456771 Msa0438680:CDS 55.0%
TTGGTATGCCGGACTTCGGT+GGG + chr3_3:3456763-3456782 None:intergenic 55.0%
TTTGGTATGCCGGACTTCGG+TGG + chr3_3:3456764-3456783 None:intergenic 55.0%
TCTAGCGTAGGGTGACACCA+AGG + chr3_3:3457183-3457202 None:intergenic 55.0%
GATTGCTGCACCCTATGCAC+AGG - chr3_3:3457429-3457448 Msa0438680:intron 55.0%
ATAAGGCAACGACAGCCCAC+AGG - chr3_3:3457547-3457566 Msa0438680:intron 55.0%
TAAGGCAACGACAGCCCACA+GGG - chr3_3:3457548-3457567 Msa0438680:intron 55.0%
GCTATCTGCCCAACGAGTTG+TGG + chr3_3:3457574-3457593 None:intergenic 55.0%
! GTCCTCCTAGTGGGTCCTCT+TGG - chr3_3:3452232-3452251 Msa0438680:intron 60.0%
CTCCAAGAGGACCCACTAGG+AGG + chr3_3:3452237-3452256 None:intergenic 60.0%
! CTCCTAGTGGGTCCTCTTGG+AGG - chr3_3:3452235-3452254 Msa0438680:intron 60.0%
ACCCTCCAAGAGGACCCACT+AGG + chr3_3:3452240-3452259 None:intergenic 60.0%
TGCTGCTGCAAGTCTCGGTC+AGG - chr3_3:3454198-3454217 Msa0438680:intron 60.0%
ACAGCTGACAGATCCCCGGT+GGG + chr3_3:3456302-3456321 None:intergenic 60.0%
TACAGCTGACAGATCCCCGG+TGG + chr3_3:3456303-3456322 None:intergenic 60.0%
CCGGGGATCTGTCAGCTGTA+AGG - chr3_3:3456303-3456322 Msa0438680:CDS 60.0%
CCAACGAGTTGTGGCCCTGT+GGG + chr3_3:3457565-3457584 None:intergenic 60.0%
CCACAGGGCCACAACTCGTT+GGG - chr3_3:3457563-3457582 Msa0438680:intron 60.0%
CTTGGAGCCCTCCAACCCAC+CGG - chr3_3:3456284-3456303 Msa0438680:CDS 65.0%
TTGGAGCCCTCCAACCCACC+GGG - chr3_3:3456285-3456304 Msa0438680:CDS 65.0%
!! CAGATCCCCGGTGGGTTGGA+GGG + chr3_3:3456294-3456313 None:intergenic 65.0%
!! ACAGATCCCCGGTGGGTTGG+AGG + chr3_3:3456295-3456314 None:intergenic 65.0%
CTGACAGATCCCCGGTGGGT+TGG + chr3_3:3456298-3456317 None:intergenic 65.0%
CCCACAGGGCCACAACTCGT+TGG - chr3_3:3457562-3457581 Msa0438680:intron 65.0%
CCCAACGAGTTGTGGCCCTG+TGG + chr3_3:3457566-3457585 None:intergenic 65.0%
TGGAGCCCTCCAACCCACCG+GGG - chr3_3:3456286-3456305 Msa0438680:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 3452099 3458129 3452099 ID=Msa0438680;Name=Msa0438680
chr3_3 mRNA 3452099 3458129 3452099 ID=Msa0438680-mRNA-1;Parent=Msa0438680;Name=Msa0438680-mRNA-1;_AED=0.09;_eAED=0.09;_QI=198|1|1|1|0.93|0.87|16|0|666
chr3_3 exon 3452099 3452185 3452099 ID=Msa0438680-mRNA-1:exon:829;Parent=Msa0438680-mRNA-1
chr3_3 exon 3452368 3452472 3452368 ID=Msa0438680-mRNA-1:exon:828;Parent=Msa0438680-mRNA-1
chr3_3 exon 3452619 3452693 3452619 ID=Msa0438680-mRNA-1:exon:827;Parent=Msa0438680-mRNA-1
chr3_3 exon 3452778 3452839 3452778 ID=Msa0438680-mRNA-1:exon:826;Parent=Msa0438680-mRNA-1
chr3_3 exon 3453544 3453628 3453544 ID=Msa0438680-mRNA-1:exon:825;Parent=Msa0438680-mRNA-1
chr3_3 exon 3453722 3453805 3453722 ID=Msa0438680-mRNA-1:exon:824;Parent=Msa0438680-mRNA-1
chr3_3 exon 3453909 3453965 3453909 ID=Msa0438680-mRNA-1:exon:823;Parent=Msa0438680-mRNA-1
chr3_3 exon 3454366 3454536 3454366 ID=Msa0438680-mRNA-1:exon:822;Parent=Msa0438680-mRNA-1
chr3_3 exon 3454643 3454734 3454643 ID=Msa0438680-mRNA-1:exon:821;Parent=Msa0438680-mRNA-1
chr3_3 exon 3454881 3454935 3454881 ID=Msa0438680-mRNA-1:exon:820;Parent=Msa0438680-mRNA-1
chr3_3 exon 3455129 3455222 3455129 ID=Msa0438680-mRNA-1:exon:819;Parent=Msa0438680-mRNA-1
chr3_3 exon 3455402 3455495 3455402 ID=Msa0438680-mRNA-1:exon:818;Parent=Msa0438680-mRNA-1
chr3_3 exon 3455921 3456134 3455921 ID=Msa0438680-mRNA-1:exon:817;Parent=Msa0438680-mRNA-1
chr3_3 exon 3456252 3456395 3456252 ID=Msa0438680-mRNA-1:exon:816;Parent=Msa0438680-mRNA-1
chr3_3 exon 3456560 3457153 3456560 ID=Msa0438680-mRNA-1:exon:815;Parent=Msa0438680-mRNA-1
chr3_3 exon 3457947 3458129 3457947 ID=Msa0438680-mRNA-1:exon:814;Parent=Msa0438680-mRNA-1
chr3_3 five_prime_UTR 3457947 3458129 3457947 ID=Msa0438680-mRNA-1:five_prime_utr;Parent=Msa0438680-mRNA-1
chr3_3 five_prime_UTR 3457139 3457153 3457139 ID=Msa0438680-mRNA-1:five_prime_utr;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3456560 3457138 3456560 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3456252 3456395 3456252 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3455921 3456134 3455921 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3455402 3455495 3455402 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3455129 3455222 3455129 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3454881 3454935 3454881 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3454643 3454734 3454643 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3454366 3454536 3454366 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3453909 3453965 3453909 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3453722 3453805 3453722 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3453544 3453628 3453544 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3452778 3452839 3452778 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3452619 3452693 3452619 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3452368 3452472 3452368 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
chr3_3 CDS 3452099 3452185 3452099 ID=Msa0438680-mRNA-1:cds;Parent=Msa0438680-mRNA-1
Gene Sequence

>Msa0438680

ATGGCAGTAATAATGGCTTTGCATGGTTGTTATTGTAACAATATAGAATCGGTAAATCAGCGAAGATCACTAGACAATCTTGGTTTTACAAGCTCAATTTCATCTCATAAATTGTCAAAGAATGAAAGGTCAACATCTGATAAGTTAAAGAGTGGTAAATTTCGTAGATTTGTGGTGGAAATGCGACAGACAGAAATGCCGCCATCAAAATTAGGTAATAATGGTAGAGCTGTTAAAATGGTACCGGCAACTGAGATAGCAAAAAGAAAGACACCGTCAGAGAATAAAGTGGAGACAGTCAATGGCTCAAAGCAAGCTGTTAATGGAGCAAGTTTGGTAAGAAGAGATCCTACTCCAGCATTGACAAAGACAACGAAACCTACAATCTCCAATGAACTTCCACCACTTGAAGAGCTAAAAGTTTTGCCCTCAGATGAAGGCTTCAGTTGGGCCAATGAAAATTACAGTTCCTGGCAGAGATCAATTGATGTATGGTCCTTTGTTCTTTCTTTACGTGTCCGTGTTCTTTTCGACAATGCAAAATGGGCATATCCGGGTGGCTTCACAGAAGAAAAGCAGATAAGCAGAAGGAGGAAAACGGCTTCATGGCTAAGGGAATCTGTATTACAGCTCGGTCCAACTTTTATTAAACTTGGACAGTTATCATCAACAAGGTCAGATCTATTTCCCCGTGAATTTGTGGATGAACTCGCAAAATTGCAGGACAAGGTACCTGCTTTCTCCCCACAGAAAGCAAGAGGCTTTATTGAGAGTGAATTAGGAGCTCCCATTAATGAATTGTTTAAAGAGTTTGAAGATCGGCCAATTGCTGCTGCAAGTCTCGGTCAGGTTCATCGTGCAATTCTGCACAATGGAGAAAAAGTAGTTATCAAAGTTCAAAGGCCTGGTTTGAAGAAGCTTTTTGACATTGACTTGCAAAACTTAAAGCTGATCGCGGAGTATTTTCAGAGAAGTGAAACTTTTGGTGGTCCAACTAGAGATTGGATCGGTATTTATGAAGAATGTGCAACGATTTTATACCAAGAAATTGATTATATAAATGAAGGGAAGAATGCTGATAGGTTCCGTCGTGATTTTCGAAACATAAAGTGGGTCCGAGTACCTCTGGTTTATTGGGATTATACAGCAATGAAGGTGTTGACCTTGGAGTATGTACCAGGTATTAAAATAAATCAAGTGGATACATTGACTTCTCGTGGTTATGATCGATTGAGAATCTCATCACGTGCTATTGAGGCGTACTTGATTCAGATATTGAAAACAGGTTTCTTTCACGCTGATCCACATCCTGGAAATCTTGCTATTGATGTTGATGAATCAATTATTTATTACGACTTTGGCATGATGGGGGAGATAAAATCTTTCACCCGTGAGAGATTGCTCGAACTGTTTTATTCCGTTTATGAGAAGGATGCCAAAAAGGTTATTCAATGCCTTATTGATCTTGGAGCCCTCCAACCCACCGGGGATCTGTCAGCTGTGAGGAGATCTGTACAATTTTTCTTGGACAATCTTCTAAACCAGTCACCAGATCAAGAGCAGACATTGTCTGCAATTGGGGAGGATTTGTTTGCAATAGCACAAGACCAGCCATTCCGGTTTCCATCAACCTTCACCTTTGTTATTAGAGCATTTTCTACACTTGAAGGCATAGGATACACACTCACTCCAGATTTCTCATTTGTGAAGATTGCTGCACCCTATGCACAGGAACTTCTAGATATAAGGCAACGACAGCCCACAGGGCCACAACTCGTTGGGCAGATAGCAAAACAAGCAAATGATGTAAGAACAAATTCCATGTCAATGCCATTGAGAGTTCAAAGAATAGAGGAGTTTGTGAAGCAAGTTGAGGCAGGAGATCTGAAACTCCGAGTTCGAGTACTAGAGTCTGAAAGAGCTGCTCGGAAAGCGACAGTGTTACAAATGGCTACTATGTACACGGTATTAGGAGGAACCTTTCTAAATATTGGTGTC
Protein sequence

>Msa0438680

MAVIMALHGCYCNNIESVNQRRSLDNLGFTSSISSHKLSKNERSTSDKLKSGKFRRFVVEMRQTEMPPSKLGNNGRAVKMVPATEIAKRKTPSENKVETVNGSKQAVNGASLVRRDPTPALTKTTKPTISNELPPLEELKVLPSDEGFSWANENYSSWQRSIDVWSFVLSLRVRVLFDNAKWAYPGGFTEEKQISRRRKTASWLRESVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDKVPAFSPQKARGFIESELGAPINELFKEFEDRPIAAASLGQVHRAILHNGEKVVIKVQRPGLKKLFDIDLQNLKLIAEYFQRSETFGGPTRDWIGIYEECATILYQEIDYINEGKNADRFRRDFRNIKWVRVPLVYWDYTAMKVLTLEYVPGIKINQVDTLTSRGYDRLRISSRAIEAYLIQILKTGFFHADPHPGNLAIDVDESIIYYDFGMMGEIKSFTRERLLELFYSVYEKDAKKVIQCLIDLGALQPTGDLSAVRRSVQFFLDNLLNQSPDQEQTLSAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGYTLTPDFSFVKIAAPYAQELLDIRQRQPTGPQLVGQIAKQANDVRTNSMSMPLRVQRIEEFVKQVEAGDLKLRVRVLESERAARKATVLQMATMYTVLGGTFLNIGV