AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0238960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0238960 MtrunA17_Chr2g0289301 84.227 317 41 1 191 498 1 317 1.81e-178 503
Msa0238960 MtrunA17_Chr2g0289301 90.385 156 13 1 1 154 1 156 5.23e-91 280
Msa0238960 MtrunA17_Chr2g0289291 85.759 316 37 2 191 498 1 316 4.24e-174 492
Msa0238960 MtrunA17_Chr2g0289291 77.987 159 26 3 1 154 1 155 5.34e-73 234
Msa0238960 MtrunA17_Chr1g0202631 76.812 138 19 2 247 379 13 142 1.37e-58 195
Msa0238960 MtrunA17_Chr1g0202631 75.214 117 23 2 51 165 7 119 1.07e-45 161
Msa0238960 MtrunA17_Chr5g0410791 44.934 227 124 1 270 496 129 354 1.09e-49 174
Msa0238960 MtrunA17_Chr5g0410791 42.574 101 45 1 62 149 91 191 2.08e-15 77.8
Msa0238960 MtrunA17_Chr8g0383751 28.767 219 113 6 275 488 76 256 5.59e-15 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0238960 AT4G22240.1 61.092 293 96 4 206 496 32 308 2.31e-113 337
Msa0238960 AT4G22240.1 54.887 133 48 4 41 168 38 163 3.18e-34 131
Msa0238960 AT4G04020.1 64.202 257 79 1 253 496 60 316 1.04e-111 333
Msa0238960 AT4G04020.1 55.556 126 44 3 52 168 49 171 8.61e-32 124
Msa0238960 AT2G35490.1 44.841 252 131 2 252 496 124 374 7.68e-67 220
Msa0238960 AT2G35490.1 46.218 119 57 3 62 179 124 236 2.83e-20 92.8

Find 126 sgRNAs with CRISPR-Local

Find 558 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGCCTTGAGTTTGCTTAA+TGG 0.209190 2_2:+12894819 Msa0238960:CDS
TGAGTTTGCTTAATGGAAAA+TGG 0.213813 2_2:+12894826 Msa0238960:CDS
TGGACTTCGAACTTCAAATT+TGG 0.214207 2_2:-12901455 None:intergenic
CAGTGTGTTTGTTCTTATTA+AGG 0.259960 2_2:+12901971 Msa0238960:CDS
TGAGTTTGCTCGATGGAAAA+TGG 0.282280 2_2:+12901149 Msa0238960:CDS
CAAAACTCTGTTCTGTTTGC+TGG 0.306297 2_2:+12895578 Msa0238960:CDS
CGCAGGTATACATCCTTTGC+CGG 0.306305 2_2:+12895467 Msa0238960:intron
TGAGGCGGGCGGTGTATGTT+CGG 0.309347 2_2:+12894565 Msa0238960:CDS
CAGCAAACAGAACGGAGTTT+TGG 0.315914 2_2:-12901399 None:intergenic
AAATTTGGCATTGGTACTAA+TGG 0.316715 2_2:-12901440 None:intergenic
CAAAACTCCGTTCTGTTTGC+TGG 0.322958 2_2:+12901400 Msa0238960:CDS
GGACAAACCTTCAAACGATT+TGG 0.329307 2_2:-12901475 None:intergenic
GTGGAGTTGAGAGAGGTTAC+TGG 0.345185 2_2:-12894462 None:intergenic
GTGGAGTTGAGAGAGGTTAC+TGG 0.345185 2_2:-12900797 None:intergenic
CAGCAAACAGAACAGAGTTT+TGG 0.351113 2_2:-12895577 None:intergenic
CAACCGATGAGGCAGTGTTT+TGG 0.384604 2_2:-12901830 None:intergenic
TTCTGCTGGCGTCGCGGTTG+CGG 0.388728 2_2:+12894623 Msa0238960:CDS
GAGCATAGCTGTTGGAGATT+GGG 0.393785 2_2:-12901887 None:intergenic
AGCCAACACAATCGGCCTTC+TGG 0.408719 2_2:-12900870 None:intergenic
TCGAAGTCCAAATCGTTTGA+AGG 0.426973 2_2:+12901468 Msa0238960:CDS
TTGGAGATTGGGATCTTCAA+TGG 0.428851 2_2:-12901876 None:intergenic
GAGGCGGGCGGTGTATGTTC+GGG 0.431419 2_2:+12894566 Msa0238960:CDS
TGGGGTCCAGAGCCTTCTGC+TGG 0.436696 2_2:+12894609 Msa0238960:intron
TGAGCATAGCTGTTGGAGAT+TGG 0.440264 2_2:-12901888 None:intergenic
TTGGTTGAGGTTTGAGAGAG+AGG 0.455247 2_2:-12894418 None:intergenic
GGGTGTTTGTGTGGAGAAGT+TGG 0.455512 2_2:-12894437 None:intergenic
AAGTTTGAAGAAGGTGTCAT+AGG 0.459618 2_2:+12901708 Msa0238960:CDS
CTCAAAGCATCAGTGGAAGC+AGG 0.463223 2_2:-12901130 None:intergenic
TTGTGTGGAGAAGTTGGTTG+AGG 0.470556 2_2:-12894431 None:intergenic
TGAAGGTGTGGAGTTGAGAG+AGG 0.477148 2_2:-12900804 None:intergenic
ATGAAGAACTACGCGTCGCA+AGG 0.483987 2_2:+12901937 Msa0238960:CDS
GGCATCAGTAGAAGCGGGTG+TGG 0.486342 2_2:-12894802 None:intergenic
CGCAGGTATACATCCTATGC+AGG 0.487078 2_2:+12901289 Msa0238960:intron
TTGGCTGAGGTTTGAGAGAG+AGG 0.490779 2_2:-12900753 None:intergenic
TGAAGGTGTGGAGTTGAGAG+AGG 0.491712 2_2:-12894469 None:intergenic
CGAAAGCAATGGAAATAAAC+CGG 0.492898 2_2:-12895486 None:intergenic
ATTCAGATCAAGTTTGAAGA+AGG 0.493133 2_2:+12901699 Msa0238960:intron
TCTCCATCGACCATCACATT+CGG 0.493543 2_2:+12900830 Msa0238960:CDS
TTACTGGAAGTGTGTTTATG+TGG 0.495185 2_2:-12900781 None:intergenic
AGAAAGTGACGGATAGTGAG+AGG 0.496240 2_2:+12894661 Msa0238960:CDS
AAACCATCGGCCAACACAAT+CGG 0.499127 2_2:-12894543 None:intergenic
GTTGAGAGAGGTTACTGGAA+GGG 0.505605 2_2:-12894457 None:intergenic
TCGAACTTCAAATTTGGCAT+TGG 0.506203 2_2:-12901449 None:intergenic
AAACCGAACGTGATGGTCGA+TGG 0.507080 2_2:-12894498 None:intergenic
TGCTGGCGTCGCGGTTGCGG+AGG 0.508923 2_2:+12894626 Msa0238960:CDS
GTGTGTTTATGTGGAGAAGT+TGG 0.512882 2_2:-12900772 None:intergenic
AAACCATCAGCCAACACAAT+CGG 0.514142 2_2:-12900878 None:intergenic
TCTCCATCGACCATCACGTT+CGG 0.514451 2_2:+12894495 Msa0238960:CDS
CTACGCGTCGCAAGGGGTGA+TGG 0.514503 2_2:+12901945 Msa0238960:CDS
TTGTGTTGGCCGATGGTTTG+AGG 0.521688 2_2:+12894547 Msa0238960:CDS
AGACCGATTGTGTTGGCCGA+TGG 0.523427 2_2:+12894540 Msa0238960:CDS
TGTCCAAAACACTGCCTCAT+CGG 0.525077 2_2:+12901827 Msa0238960:CDS
TTATGTGGAGAAGTTGGCTG+AGG 0.526525 2_2:-12900766 None:intergenic
ATTTCTTCAACTGTAAGTAA+TGG 0.527551 2_2:-12895521 None:intergenic
GTTGGCCGATGGTTTGAGGC+GGG 0.530141 2_2:+12894551 Msa0238960:CDS
TAATACAAATGATGATGAGT+GGG 0.532459 2_2:+12894590 Msa0238960:CDS
GGCATTGGTACTAATGGAGG+TGG 0.532928 2_2:-12895612 None:intergenic
TCAAAGCATCAGTGGAAGCA+GGG 0.536968 2_2:-12901129 None:intergenic
GGCATTGGTACTAATGGAGG+AGG 0.537415 2_2:-12901434 None:intergenic
TATTTCCATTGCTGTCAAGC+GGG 0.539003 2_2:+12901314 Msa0238960:CDS
AAACCGAATGTGATGGTCGA+TGG 0.540447 2_2:-12900833 None:intergenic
TTATTTCCATTGCTGTCAAG+CGG 0.548665 2_2:+12901313 Msa0238960:CDS
CACCGCCCGCCTCAAACCAT+CGG 0.549599 2_2:-12894556 None:intergenic
CGACGCGTAGTTCTTCATCA+AGG 0.550155 2_2:-12901932 None:intergenic
TGAGAGGGAGAAGCTGAAGA+AGG 0.553126 2_2:+12894677 Msa0238960:CDS
GGAGAAGCTGAAGAAGGCGT+TGG 0.553210 2_2:+12894683 Msa0238960:CDS
AGGCCGATTGTGTTGGCTGA+TGG 0.554574 2_2:+12900875 Msa0238960:CDS
ATATGCCTTTGAAAGGTGAT+AGG 0.554647 2_2:-12901797 None:intergenic
GCAACCGCGACGCCAGCAGA+AGG 0.556346 2_2:-12894621 None:intergenic
GCAACTGCCACATCGGCAGA+AGG 0.556723 2_2:-12900956 None:intergenic
CCAACAGCTATGCTCAATCA+TGG 0.556996 2_2:+12901895 Msa0238960:CDS
TAATACGAATGATGATGAGT+GGG 0.557731 2_2:+12900925 Msa0238960:CDS
TGAAGAACTACGCGTCGCAA+GGG 0.558347 2_2:+12901938 Msa0238960:CDS
CAATGGAAATAAACCTGCAT+AGG 0.558447 2_2:-12901302 None:intergenic
CTAATGGAGGAGGTAGTCAA+TGG 0.558560 2_2:-12901424 None:intergenic
GAAGTAAATATGCCTTTGAA+AGG 0.561476 2_2:-12901804 None:intergenic
ATTAGAGATACCAGAAAATG+TGG 0.563570 2_2:+12901752 Msa0238960:CDS
CTCAAGGCATCAGTAGAAGC+GGG 0.563935 2_2:-12894807 None:intergenic
TTTGGCATTGGTACTAATGG+AGG 0.565960 2_2:-12901437 None:intergenic
GTGTTTGTTCTTATTAAGGA+AGG 0.566267 2_2:+12901975 Msa0238960:CDS
AATTCTTCAACCTCGAGTAA+TGG 0.568263 2_2:-12901343 None:intergenic
TTTGGCATTGGTACTAATGG+AGG 0.570777 2_2:-12895615 None:intergenic
AAGCTGAAGAAGGCGTTGGT+TGG 0.574482 2_2:+12894687 Msa0238960:CDS
CAATGGAAATAAACCGGCAA+AGG 0.577508 2_2:-12895480 None:intergenic
TGAGACGGAGAAGCTGAAGA+AGG 0.582185 2_2:+12901000 Msa0238960:CDS
GATCTTCAATGGAGGCTGAT+CGG 0.582653 2_2:-12901865 None:intergenic
TTACTGGAAGGGTGTTTGTG+TGG 0.583482 2_2:-12894446 None:intergenic
CCATGATTGAGCATAGCTGT+TGG 0.585587 2_2:-12901895 None:intergenic
AGTAGTCCGCTCGAAAGCAA+TGG 0.587994 2_2:-12895497 None:intergenic
GATGCTTTGAGTTTGCTCGA+TGG 0.588967 2_2:+12901142 Msa0238960:CDS
AGTTGAGAGAGGTTACTGGA+AGG 0.592004 2_2:-12894458 None:intergenic
TCTAATGAGTCTGTCAGCTG+TGG 0.598295 2_2:-12901735 None:intergenic
TTCTGAGCAAACATGCCAGA+AGG 0.600231 2_2:+12900855 Msa0238960:CDS
CGCGTCGCAAGGGGTGATGG+TGG 0.601309 2_2:+12901948 Msa0238960:CDS
CGATGGAGAAGTTGAAGGTG+TGG 0.601344 2_2:-12894481 None:intergenic
ATTGACCTATCACCTTTCAA+AGG 0.603025 2_2:+12901792 Msa0238960:CDS
TGCCAGAAGGCCGATTGTGT+TGG 0.605497 2_2:+12900868 Msa0238960:CDS
CGATGGAGAAATTGAAGGTG+TGG 0.609239 2_2:-12900816 None:intergenic
AGTAGCCCGCTTGACAGCAA+TGG 0.609539 2_2:-12901319 None:intergenic
ACTCAAGGCATCAGTAGAAG+CGG 0.610668 2_2:-12894808 None:intergenic
GCATCAGTGGAAGCAGGGGT+AGG 0.612738 2_2:-12901124 None:intergenic
CTAATGGAGGTGGTAGACAA+TGG 0.616798 2_2:-12895602 None:intergenic
ATGGTCGATGGAGAAATTGA+AGG 0.622776 2_2:-12900821 None:intergenic
GCATCAGTAGAAGCGGGTGT+GGG 0.625232 2_2:-12894801 None:intergenic
GGCCGATGGTTTGAGGCGGG+CGG 0.626348 2_2:+12894554 Msa0238960:CDS
CTAATACAAATGATGATGAG+TGG 0.629749 2_2:+12894589 Msa0238960:CDS
ATAATACGAATGATGATGAG+TGG 0.630894 2_2:+12900924 Msa0238960:CDS
ATGGTCGATGGAGAAGTTGA+AGG 0.631836 2_2:-12894486 None:intergenic
GCTCAGAAAACCGAATGTGA+TGG 0.633469 2_2:-12900840 None:intergenic
GAAAGTGACGGATAGTGAGA+GGG 0.635117 2_2:+12894662 Msa0238960:CDS
CAAAGCATCAGTGGAAGCAG+GGG 0.635665 2_2:-12901128 None:intergenic
TGTCAGAAGACCGATTGTGT+TGG 0.635862 2_2:+12894533 Msa0238960:CDS
GATAGTGACAGAAAGTGAGA+CGG 0.637714 2_2:+12900985 Msa0238960:CDS
TTATTTCCATTGCTTTCGAG+CGG 0.638687 2_2:+12895491 Msa0238960:CDS
CGGGCTACTGCCATTACTCG+AGG 0.640414 2_2:+12901333 Msa0238960:CDS
GAGATTGGGATCTTCAATGG+AGG 0.642822 2_2:-12901873 None:intergenic
AATTGTTTGCACAACCGATG+AGG 0.645521 2_2:-12901841 None:intergenic
AGAGCCTTCTGCTGGCGTCG+CGG 0.645840 2_2:+12894617 Msa0238960:intron
GAAGAACTACGCGTCGCAAG+GGG 0.653009 2_2:+12901939 Msa0238960:CDS
GAAAGAGACTGAGAAAGTGA+CGG 0.653391 2_2:+12894650 Msa0238960:CDS
GAGCAAACTCAAAGCATCAG+TGG 0.658980 2_2:-12901137 None:intergenic
AGCAACTAGTGAAACAAGAG+CGG 0.674373 2_2:+12901063 Msa0238960:CDS
CAATGGACCAGCAAACAGAA+CGG 0.674909 2_2:-12901407 None:intergenic
TGTTGGCCGATGGTTTGAGG+CGG 0.676008 2_2:+12894550 Msa0238960:CDS
AATACGAATGATGATGAGTG+GGG 0.694555 2_2:+12900926 Msa0238960:CDS
AATACAAATGATGATGAGTG+GGG 0.724716 2_2:+12894591 Msa0238960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTTTAATTTTAATATT+TGG + chr2_2:12894866-12894885 Msa0238960:intron 0.0%
!!! TTTTTTTTTTTTTTTTTTTA+AGG + chr2_2:12896921-12896940 Msa0238960:intron 0.0%
!! ATAATAAAATAAAAAAAAAT+TGG - chr2_2:12899353-12899372 None:intergenic 0.0%
!!! TTTTTTATTTTATTATTATT+TGG + chr2_2:12899357-12899376 Msa0238960:intron 0.0%
!! AAATAAAAAAATTAAGCTAT+TGG + chr2_2:12895936-12895955 Msa0238960:intron 10.0%
!!! TTTTTTTTTTTTTTTAAGGA+AGG + chr2_2:12896925-12896944 Msa0238960:intron 10.0%
!! TTAAATTATGAATGAATTAT+AGG - chr2_2:12898455-12898474 None:intergenic 10.0%
!!! TTAGTTTAAATGATTTTTTT+AGG + chr2_2:12898567-12898586 Msa0238960:intron 10.0%
!! GTTAAAAGAAAATAAAAATT+GGG - chr2_2:12899302-12899321 None:intergenic 10.0%
!! AGTTAAAAGAAAATAAAAAT+TGG - chr2_2:12899303-12899322 None:intergenic 10.0%
!!! TTTATTTTATTATTATTTGG+TGG + chr2_2:12899360-12899379 Msa0238960:intron 10.0%
!!! TTGAATTATTTAAATTTTTC+GGG + chr2_2:12899509-12899528 Msa0238960:intron 10.0%
!!! TTGAATTATTTAAATTTTTC+GGG + chr2_2:12899509-12899528 Msa0238960:intron 10.0%
!! TGATGGTTTAAAAATTAAAT+TGG - chr2_2:12894984-12895003 None:intergenic 15.0%
!!! ACATTTTATCAAAAAAATAC+AGG - chr2_2:12895185-12895204 None:intergenic 15.0%
!! AATTATATGTAATAATATCC+AGG + chr2_2:12896293-12896312 Msa0238960:intron 15.0%
!!! AAATTTTTTTACATCTAGAA+TGG - chr2_2:12896469-12896488 None:intergenic 15.0%
!! AATAGTTAATAAATCTCATT+TGG + chr2_2:12898852-12898871 Msa0238960:intron 15.0%
!! TGCTAAAAAATATTTAAACT+AGG + chr2_2:12899195-12899214 Msa0238960:intron 15.0%
!!! AATATTTAAACTAGGTATTT+TGG + chr2_2:12899203-12899222 Msa0238960:intron 15.0%
!!! ATTTTCTTTTAACTTGTTAA+CGG + chr2_2:12899309-12899328 Msa0238960:intron 15.0%
!! TTTAAAAAATCAACGATTAT+AGG - chr2_2:12899733-12899752 None:intergenic 15.0%
!!! ATCGTTGATTTTTTAAATTT+TGG + chr2_2:12899736-12899755 Msa0238960:intron 15.0%
!!! TCGTTGATTTTTTAAATTTT+GGG + chr2_2:12899737-12899756 Msa0238960:intron 15.0%
!! TAACACATAAACAATTTATA+TGG - chr2_2:12900310-12900329 None:intergenic 15.0%
!! ATGTTAGATGAATATAGTAA+TGG + chr2_2:12894920-12894939 Msa0238960:intron 20.0%
!! AAATAGTTCAAATTTCAAAC+AGG - chr2_2:12894957-12894976 None:intergenic 20.0%
!! AAATAAAAAATATGGAGATG+CGG + chr2_2:12895055-12895074 Msa0238960:intron 20.0%
!! AGTAAGAAAATTAGAAATGA+AGG - chr2_2:12895684-12895703 None:intergenic 20.0%
!! TGATAAACTATTTCAATCAT+GGG + chr2_2:12895769-12895788 Msa0238960:intron 20.0%
!!! GCTTATTTTCAAATTCTTTT+AGG + chr2_2:12896518-12896537 Msa0238960:intron 20.0%
!!! CTGTTCAAAATCAAATATTT+TGG + chr2_2:12896693-12896712 Msa0238960:intron 20.0%
!!! AATCAAATATTTTGGTTGTA+TGG + chr2_2:12896701-12896720 Msa0238960:intron 20.0%
!! AGATAATATTGTCAATACAA+AGG + chr2_2:12896969-12896988 Msa0238960:intron 20.0%
!! GATAATATTGTCAATACAAA+GGG + chr2_2:12896970-12896989 Msa0238960:intron 20.0%
!! ATAATATTGTCAATACAAAG+GGG + chr2_2:12896971-12896990 Msa0238960:intron 20.0%
!! ACTTATATAATACGTTAAAG+TGG - chr2_2:12897244-12897263 None:intergenic 20.0%
!!! GTAATTTTACTGTTAGTAAT+TGG - chr2_2:12898211-12898230 None:intergenic 20.0%
!! GTCTCAATTTAATAATTTAG+TGG + chr2_2:12898663-12898682 Msa0238960:intron 20.0%
!!! CTATTTTATTATTACAACGA+GGG - chr2_2:12898763-12898782 None:intergenic 20.0%
!!! ACTATTTTATTATTACAACG+AGG - chr2_2:12898764-12898783 None:intergenic 20.0%
!! AAAAATGTGAAAAATGCAAA+GGG - chr2_2:12898929-12898948 None:intergenic 20.0%
!! AAAAAATGTGAAAAATGCAA+AGG - chr2_2:12898930-12898949 None:intergenic 20.0%
!! TTTAATACACATACAAACAA+AGG - chr2_2:12899012-12899031 None:intergenic 20.0%
!! ACAAGTTAGTAGTATTAATT+AGG + chr2_2:12899053-12899072 Msa0238960:intron 20.0%
!! CAAGTTAGTAGTATTAATTA+GGG + chr2_2:12899054-12899073 Msa0238960:intron 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG + chr2_2:12899055-12899074 Msa0238960:intron 20.0%
!! GGACAAAAATAAAATCAAAT+GGG + chr2_2:12899137-12899156 Msa0238960:intron 20.0%
!!! TGATTTGGCTAATTATTATT+GGG - chr2_2:12899278-12899297 None:intergenic 20.0%
!!! ATGATTTGGCTAATTATTAT+TGG - chr2_2:12899279-12899298 None:intergenic 20.0%
!! AAATAAAAATTGGGATGATT+TGG - chr2_2:12899293-12899312 None:intergenic 20.0%
!!! TTTTCAACGGTTAATTTTAA+TGG - chr2_2:12899457-12899476 None:intergenic 20.0%
!!! AATTATTTAAATTTTTCGGG+TGG + chr2_2:12899512-12899531 Msa0238960:intron 20.0%
!!! ATTATTTAAATTTTTCGGGT+GGG + chr2_2:12899513-12899532 Msa0238960:intron 20.0%
!!! GCTTTTATACAATTTTATGT+CGG - chr2_2:12899584-12899603 None:intergenic 20.0%
!!! AATTATTTAAATTTTTCGGG+TGG + chr2_2:12899512-12899531 Msa0238960:intron 20.0%
!!! ATTATTTAAATTTTTCGGGT+GGG + chr2_2:12899513-12899532 Msa0238960:intron 20.0%
!!! GATTTTATACAATTTTGTGT+CGG - chr2_2:12899698-12899717 None:intergenic 20.0%
!!! CGTTGATTTTTTAAATTTTG+GGG + chr2_2:12899738-12899757 Msa0238960:intron 20.0%
!!! GTTGATTTTTTAAATTTTGG+GGG + chr2_2:12899739-12899758 Msa0238960:intron 20.0%
!!! TTGTTGTAATTTGTTTTTAC+AGG - chr2_2:12899846-12899865 None:intergenic 20.0%
!! TACAAATGACTAATTATTGT+CGG + chr2_2:12900023-12900042 Msa0238960:intron 20.0%
!! TATCTTGTGAAATATCTATA+CGG + chr2_2:12900187-12900206 Msa0238960:intron 20.0%
!! ATTTATATGGTACTAAACAT+GGG - chr2_2:12900297-12900316 None:intergenic 20.0%
!! AATTTATATGGTACTAAACA+TGG - chr2_2:12900298-12900317 None:intergenic 20.0%
!! TCTTAATTCAAGAAAGAAAA+TGG + chr2_2:12900730-12900749 Msa0238960:intron 20.0%
!! AAGGAAAAAAATAAACGAAA+AGG - chr2_2:12901509-12901528 None:intergenic 20.0%
!! AAAATCGATATATAAACGTA+AGG + chr2_2:12901547-12901566 Msa0238960:intron 20.0%
!! AATCGAATATGAGAATTATT+TGG - chr2_2:12901618-12901637 None:intergenic 20.0%
!! TAATACAAATGATGATGAGT+GGG + chr2_2:12894590-12894609 Msa0238960:CDS 25.0%
! TCAAAATTCATTCAACATGA+TGG - chr2_2:12895001-12895020 None:intergenic 25.0%
! AATAAAAAATATGGAGATGC+GGG + chr2_2:12895056-12895075 Msa0238960:intron 25.0%
!! AACTCATATTTGTTGAAACA+TGG - chr2_2:12895157-12895176 None:intergenic 25.0%
! ATGTTTCAACAAATATGAGT+TGG + chr2_2:12895156-12895175 Msa0238960:intron 25.0%
!!! CATATTTTTATTGCTAGCAA+TGG + chr2_2:12895218-12895237 Msa0238960:intron 25.0%
! ATTTCTTCAACTGTAAGTAA+TGG - chr2_2:12895524-12895543 None:intergenic 25.0%
!! TTTAACTTCAAATTTGGCAT+TGG - chr2_2:12895630-12895649 None:intergenic 25.0%
!!! TGGACTTTTAACTTCAAATT+TGG - chr2_2:12895636-12895655 None:intergenic 25.0%
! GAGAAATGATTAAGGAAATT+CGG + chr2_2:12895721-12895740 Msa0238960:intron 25.0%
! CTGATAAACTATTTCAATCA+TGG + chr2_2:12895768-12895787 Msa0238960:intron 25.0%
! TCAATCAAGGTCAAATTATT+TGG - chr2_2:12895811-12895830 None:intergenic 25.0%
!! CAGAAAATGTGGAATTTTTA+GGG + chr2_2:12896033-12896052 Msa0238960:intron 25.0%
! TATAACCATCATTTGAACTA+TGG + chr2_2:12896494-12896513 Msa0238960:intron 25.0%
! ATTAGAACACTAAATGGAAA+CGG - chr2_2:12896738-12896757 None:intergenic 25.0%
!!! CAATTTTAACTTTCCTTGTT+TGG - chr2_2:12896856-12896875 None:intergenic 25.0%
! AACGTATTATATAAGTCCAA+AGG + chr2_2:12897248-12897267 Msa0238960:intron 25.0%
!!! TTGATAATGACCAGATTATT+TGG - chr2_2:12898088-12898107 None:intergenic 25.0%
! TATATACGATGTATCTCATA+TGG - chr2_2:12898419-12898438 None:intergenic 25.0%
! AACTAATTTAGAAACCGAAT+TGG - chr2_2:12898553-12898572 None:intergenic 25.0%
!!! GAGTATTTTTTAGTTCTCAT+GGG - chr2_2:12898884-12898903 None:intergenic 25.0%
! AAAATGTGAAAAATGCAAAG+GGG - chr2_2:12898928-12898947 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG + chr2_2:12899065-12899084 Msa0238960:intron 25.0%
! ATGCATCTAGTAATTTGAAA+AGG + chr2_2:12899101-12899120 Msa0238960:intron 25.0%
! TGCATCTAGTAATTTGAAAA+GGG + chr2_2:12899102-12899121 Msa0238960:intron 25.0%
! GGGACAAAAATAAAATCAAA+TGG + chr2_2:12899136-12899155 Msa0238960:intron 25.0%
! CAAAAATAAAATCAAATGGG+TGG + chr2_2:12899140-12899159 Msa0238960:intron 25.0%
! GATTTGGCTAATTATTATTG+GGG - chr2_2:12899277-12899296 None:intergenic 25.0%
!!! GGCTTTAAACAATTTTTCAA+CGG - chr2_2:12899470-12899489 None:intergenic 25.0%
!!! TACAATTTTATGTCGGTTTT+AGG - chr2_2:12899577-12899596 None:intergenic 25.0%
!!! ATTTTTTAAATTTTGGGGGT+GGG + chr2_2:12899743-12899762 Msa0238960:intron 25.0%
!!! TGTAATTTGTTTTTACAGGT+TGG - chr2_2:12899842-12899861 None:intergenic 25.0%
! AATCTCAAAGAAATGCTTTA+TGG + chr2_2:12899864-12899883 Msa0238960:intron 25.0%
!! TCTGGACTAATTTTTACTTT+TGG + chr2_2:12899903-12899922 Msa0238960:intron 25.0%
!! TTTAAATACATTGTTGCTTG+AGG + chr2_2:12899973-12899992 Msa0238960:intron 25.0%
! TTTCTAACATATCTCGAAAA+CGG + chr2_2:12900099-12900118 Msa0238960:intron 25.0%
! GTTACATAAATCTTACAAGT+AGG + chr2_2:12900246-12900265 Msa0238960:intron 25.0%
! ATCTTACAAGTAGGTTATTT+CGG + chr2_2:12900255-12900274 Msa0238960:intron 25.0%
! TCCCATGATGTAATAAATAT+GGG + chr2_2:12900336-12900355 Msa0238960:intron 25.0%
! ACCCATATTTATTACATCAT+GGG - chr2_2:12900340-12900359 None:intergenic 25.0%
! AACCCATATTTATTACATCA+TGG - chr2_2:12900341-12900360 None:intergenic 25.0%
! TGTCATAAGCTATATTCTTA+TGG - chr2_2:12900505-12900524 None:intergenic 25.0%
!!! GTTTTGGACACTTAAATTTT+CGG - chr2_2:12901386-12901405 None:intergenic 25.0%
!! CAGAAAATGTGGAATTTTTA+GGG + chr2_2:12896033-12896052 Msa0238960:intron 25.0%
! CTAATACAAATGATGATGAG+TGG + chr2_2:12894589-12894608 Msa0238960:CDS 30.0%
! AATACAAATGATGATGAGTG+GGG + chr2_2:12894591-12894610 Msa0238960:CDS 30.0%
! TTTTCCATTAAGCAAACTCA+AGG - chr2_2:12894826-12894845 None:intergenic 30.0%
! TGAGTTTGCTTAATGGAAAA+TGG + chr2_2:12894826-12894845 Msa0238960:CDS 30.0%
ATAAAAAATATGGAGATGCG+GGG + chr2_2:12895057-12895076 Msa0238960:intron 30.0%
! CATATTTGTTGAAACATGGA+AGG - chr2_2:12895153-12895172 None:intergenic 30.0%
! AGCAATGGTTTGTATTTCTA+AGG + chr2_2:12895233-12895252 Msa0238960:intron 30.0%
TAAAATTGCATCACATGTGA+TGG + chr2_2:12895311-12895330 Msa0238960:intron 30.0%
ACAGTGCTAGTTAACAATAA+TGG + chr2_2:12895390-12895409 Msa0238960:intron 30.0%
!! TAAACTCATGGTTTGATTTG+TGG + chr2_2:12895441-12895460 Msa0238960:intron 30.0%
!! AAATTTGGCATTGGTACTAA+TGG - chr2_2:12895621-12895640 None:intergenic 30.0%
AAATTAGAAATGAAGGAGCA+AGG - chr2_2:12895677-12895696 None:intergenic 30.0%
TTAATCATTTCTCTCCTAAC+TGG - chr2_2:12895714-12895733 None:intergenic 30.0%
AGTTAGGAGAGAAATGATTA+AGG + chr2_2:12895713-12895732 Msa0238960:intron 30.0%
TGATTGATGTGTTTCAATCA+AGG - chr2_2:12895824-12895843 None:intergenic 30.0%
!! ATAAGCGTCAATCATTTTTC+TGG - chr2_2:12895904-12895923 None:intergenic 30.0%
!!! CTTTTTTCAGATCAAGTTTG+AGG + chr2_2:12895965-12895984 Msa0238960:intron 30.0%
ATTAGAGATACCAGAAAATG+TGG + chr2_2:12896022-12896041 Msa0238960:intron 30.0%
! CCTAAAAATTCCACATTTTC+TGG - chr2_2:12896035-12896054 None:intergenic 30.0%
! CCAGAAAATGTGGAATTTTT+AGG + chr2_2:12896032-12896051 Msa0238960:intron 30.0%
ATTGATCTATCACCTTTCAA+AGG + chr2_2:12896062-12896081 Msa0238960:intron 30.0%
ATTCATAAATAAGCGAACAC+TGG + chr2_2:12896332-12896351 Msa0238960:intron 30.0%
AAATGTAAGAATATACAGCG+CGG - chr2_2:12896419-12896438 None:intergenic 30.0%
!!! ATATTTTGGTTGTATGGTCT+TGG + chr2_2:12896707-12896726 Msa0238960:intron 30.0%
CAACAGATTAGAACACTAAA+TGG - chr2_2:12896744-12896763 None:intergenic 30.0%
AAATTTATCGTAGGACCATA+AGG - chr2_2:12896767-12896786 None:intergenic 30.0%
TGCACTACAAAATTTATCGT+AGG - chr2_2:12896776-12896795 None:intergenic 30.0%
TCTTTCTATACTTCCAAACA+AGG + chr2_2:12896840-12896859 Msa0238960:intron 30.0%
TAAAATTGAGCCATTTCAAG+TGG + chr2_2:12896868-12896887 Msa0238960:intron 30.0%
GGTGCATGATAATAAATAGT+TGG + chr2_2:12896992-12897011 Msa0238960:intron 30.0%
GTCAGCTATTTGGAAATTTA+AGG - chr2_2:12897967-12897986 None:intergenic 30.0%
! TTTTACTGTTAGTAATTGGC+TGG - chr2_2:12898207-12898226 None:intergenic 30.0%
GAGAATTGGAATAGAATTAC+CGG + chr2_2:12898295-12898314 Msa0238960:intron 30.0%
!!! GACTAATTTTAGTTTCTCCA+TGG + chr2_2:12898609-12898628 Msa0238960:intron 30.0%
GAAAAACAAATTCGAATCCA+TGG - chr2_2:12898629-12898648 None:intergenic 30.0%
! TTAAATTAGCCTACTCAAAC+TGG + chr2_2:12898799-12898818 Msa0238960:intron 30.0%
ATTACAAGTTTGATTCTCCT+CGG - chr2_2:12898827-12898846 None:intergenic 30.0%
!!! GGAGTATTTTTTAGTTCTCA+TGG - chr2_2:12898885-12898904 None:intergenic 30.0%
AAATGTGAAAAATGCAAAGG+GGG - chr2_2:12898927-12898946 None:intergenic 30.0%
CATACAAACAAAGGACAATT+TGG - chr2_2:12899003-12899022 None:intergenic 30.0%
GCATCTAGTAATTTGAAAAG+GGG + chr2_2:12899103-12899122 Msa0238960:intron 30.0%
CATCTAGTAATTTGAAAAGG+GGG + chr2_2:12899104-12899123 Msa0238960:intron 30.0%
GGAGCTAGAAAAAAAAGTTA+GGG + chr2_2:12899427-12899446 Msa0238960:intron 30.0%
CTAGAAAAAAAAGTTAGGGT+GGG + chr2_2:12899431-12899450 Msa0238960:intron 30.0%
! AATTATAGGTCTATTTTGCG+AGG - chr2_2:12899491-12899510 None:intergenic 30.0%
!!! TTTATGTCGGTTTTAGGTTT+CGG - chr2_2:12899571-12899590 None:intergenic 30.0%
!!! TACAATTTTGTGTCGGTTTT+AGG - chr2_2:12899691-12899710 None:intergenic 30.0%
!!! GATTTTTTAAATTTTGGGGG+TGG + chr2_2:12899742-12899761 Msa0238960:intron 30.0%
CATATTTATTACATCATGGG+AGG - chr2_2:12900337-12900356 None:intergenic 30.0%
CTCCCATGATGTAATAAATA+TGG + chr2_2:12900335-12900354 Msa0238960:intron 30.0%
CAAATTCGTGTTTGGATTTA+TGG + chr2_2:12900558-12900577 Msa0238960:intron 30.0%
!!! TATCTACCGTTTTGTTTCTT+AGG + chr2_2:12900609-12900628 Msa0238960:intron 30.0%
TTGTGTCCTAAGAAACAAAA+CGG - chr2_2:12900618-12900637 None:intergenic 30.0%
AGAATGAAGATTGAAGAAAG+AGG - chr2_2:12900709-12900728 None:intergenic 30.0%
! ATAATACGAATGATGATGAG+TGG + chr2_2:12900924-12900943 Msa0238960:CDS 30.0%
! TAATACGAATGATGATGAGT+GGG + chr2_2:12900925-12900944 Msa0238960:CDS 30.0%
!!! GTTTTGATTGGTTGGTTTTA+CGG + chr2_2:12901022-12901041 Msa0238960:CDS 30.0%
!!! TTTTGATTGGTTGGTTTTAC+GGG + chr2_2:12901023-12901042 Msa0238960:CDS 30.0%
!! AAATTTGGCATTGGTACTAA+TGG - chr2_2:12895621-12895640 None:intergenic 30.0%
! CCTTGATTGGAATAATTTGT+CGG - chr2_2:12901578-12901597 None:intergenic 30.0%
CATATCATGATTCAAGCTAT+TGG + chr2_2:12901660-12901679 Msa0238960:intron 30.0%
ATTCAGATCAAGTTTGAAGA+AGG + chr2_2:12901699-12901718 Msa0238960:intron 30.0%
ATTAGAGATACCAGAAAATG+TGG + chr2_2:12896022-12896041 Msa0238960:intron 30.0%
! CCTAAAAATTCCACATTTTC+TGG - chr2_2:12896035-12896054 None:intergenic 30.0%
! CCAGAAAATGTGGAATTTTT+AGG + chr2_2:12896032-12896051 Msa0238960:intron 30.0%
GAAGTAAATATGCCTTTGAA+AGG - chr2_2:12901807-12901826 None:intergenic 30.0%
CAGTGTGTTTGTTCTTATTA+AGG + chr2_2:12901971-12901990 Msa0238960:CDS 30.0%
GTGTTTGTTCTTATTAAGGA+AGG + chr2_2:12901975-12901994 Msa0238960:CDS 30.0%
TTTGTACCTCTTGTTACCAT+TGG - chr2_2:12895337-12895356 None:intergenic 35.0%
TGTCAGAAGCAGATTTATTC+TGG - chr2_2:12895373-12895392 None:intergenic 35.0%
TTCTGCAGCTAATAAACTCA+TGG + chr2_2:12895429-12895448 Msa0238960:intron 35.0%
CGAAAGCAATGGAAATAAAC+CGG - chr2_2:12895489-12895508 None:intergenic 35.0%
TTATTTCCATTGCTTTCGAG+CGG + chr2_2:12895491-12895510 Msa0238960:CDS 35.0%
TAAAAGTCCAAATCGTTTGC+AGG + chr2_2:12895646-12895665 Msa0238960:intron 35.0%
GGAAATTCGGATTTCAATTG+AGG + chr2_2:12895734-12895753 Msa0238960:intron 35.0%
TTTCAGATCAAGTTTGAGGA+AGG + chr2_2:12895969-12895988 Msa0238960:intron 35.0%
GAAGTAAGTATGCCTTTGAA+AGG - chr2_2:12896077-12896096 None:intergenic 35.0%
ATTGGAAATTGTTTGCACGA+CGG - chr2_2:12896120-12896139 None:intergenic 35.0%
TTGGAAATTGGGATCTTCAA+CGG - chr2_2:12896149-12896168 None:intergenic 35.0%
CAGTGTGTTTGTTCTTATCA+AGG + chr2_2:12896241-12896260 Msa0238960:intron 35.0%
GTGTTTGTTCTTATCAAGGA+AGG + chr2_2:12896245-12896264 Msa0238960:intron 35.0%
ATATACGACAATTGAACACC+TGG - chr2_2:12896314-12896333 None:intergenic 35.0%
AAGCTCCATAGTTCAAATGA+TGG - chr2_2:12896502-12896521 None:intergenic 35.0%
TGTTCTAATCTGTTGCCTTA+TGG + chr2_2:12896749-12896768 Msa0238960:intron 35.0%
GAAACAACTTAGGTGTTTAC+TGG - chr2_2:12896806-12896825 None:intergenic 35.0%
! CTGAAAGTCTGAAACAACTT+AGG - chr2_2:12896816-12896835 None:intergenic 35.0%
! AAGTTGTTTCAGACTTTCAG+TGG + chr2_2:12896816-12896835 Msa0238960:intron 35.0%
!! AGTTGGACTAGCTAATAATG+TGG + chr2_2:12897009-12897028 Msa0238960:intron 35.0%
TATTCAGAGACAAGCAAATG+AGG - chr2_2:12897059-12897078 None:intergenic 35.0%
!! TGATAATGTCGACTTTGAAG+TGG - chr2_2:12897204-12897223 None:intergenic 35.0%
AATACGTTAAAGTGGTTGAG+TGG - chr2_2:12897236-12897255 None:intergenic 35.0%
ATGAACAGCTGCAAAATTCA+TGG + chr2_2:12897290-12897309 Msa0238960:intron 35.0%
! AGCTGCAAAATTCATGGTTT+TGG + chr2_2:12897296-12897315 Msa0238960:intron 35.0%
! TATTTTTCCTTTCGCGATAC+AGG - chr2_2:12897799-12897818 None:intergenic 35.0%
! GCAACTATGTTTTTCACCTT+CGG + chr2_2:12897936-12897955 Msa0238960:intron 35.0%
AAGTCTATACACACTTCGAA+CGG + chr2_2:12898037-12898056 Msa0238960:intron 35.0%
! ACTTGGCTTCGTCTATTTTA+CGG - chr2_2:12898130-12898149 None:intergenic 35.0%
GGTGGAATGAGAATTTAATC+CGG - chr2_2:12898169-12898188 None:intergenic 35.0%
AAGTATAGACAGTAGCATAC+CGG - chr2_2:12898249-12898268 None:intergenic 35.0%
TTAATCCGAGTTATGTTTGG+AGG - chr2_2:12898376-12898395 None:intergenic 35.0%
CACTTAATCCGAGTTATGTT+TGG - chr2_2:12898379-12898398 None:intergenic 35.0%
CAAACATAACTCGGATTAAG+TGG + chr2_2:12898377-12898396 Msa0238960:intron 35.0%
! GTTGCTTTGAATAGTTAGAG+TGG + chr2_2:12898500-12898519 Msa0238960:intron 35.0%
AATGTGAAAAATGCAAAGGG+GGG - chr2_2:12898926-12898945 None:intergenic 35.0%
TTGAAAAGGGGGTTACATTT+AGG + chr2_2:12899115-12899134 Msa0238960:intron 35.0%
TGAAAAGGGGGTTACATTTA+GGG + chr2_2:12899116-12899135 Msa0238960:intron 35.0%
TCAAATGGGTGGTTACATTA+AGG + chr2_2:12899151-12899170 Msa0238960:intron 35.0%
CAAATGGGTGGTTACATTAA+GGG + chr2_2:12899152-12899171 Msa0238960:intron 35.0%
CGGAGCTAGAAAAAAAAGTT+AGG + chr2_2:12899426-12899445 Msa0238960:intron 35.0%
GCTAGAAAAAAAAGTTAGGG+TGG + chr2_2:12899430-12899449 Msa0238960:intron 35.0%
! AAATGTGAAAACAGCTTTGG+TGG - chr2_2:12899807-12899826 None:intergenic 35.0%
CTGAAATGTGAAAACAGCTT+TGG - chr2_2:12899810-12899829 None:intergenic 35.0%
!! CAAAGCTGTTTTCACATTTC+AGG + chr2_2:12899808-12899827 Msa0238960:intron 35.0%
GGAAGTTGAAAACATGTTTC+TGG + chr2_2:12899885-12899904 Msa0238960:intron 35.0%
!! GGTTAAGATTGCTCTGAAAT+TGG + chr2_2:12900120-12900139 Msa0238960:intron 35.0%
TTATCGTTTCCAAACTCTGA+TGG - chr2_2:12900150-12900169 None:intergenic 35.0%
! GACAATGATTTGTGTTTCGA+TGG + chr2_2:12900392-12900411 Msa0238960:intron 35.0%
!! AAACACGAATTTGTTAGCTG+CGG - chr2_2:12900551-12900570 None:intergenic 35.0%
TCGTGTTTGGATTTATGGTT+CGG + chr2_2:12900563-12900582 Msa0238960:intron 35.0%
! GATTTCTTGAGAATGATGGA+TGG - chr2_2:12900678-12900697 None:intergenic 35.0%
GAGAGATTTCTTGAGAATGA+TGG - chr2_2:12900682-12900701 None:intergenic 35.0%
! TTACTGGAAGTGTGTTTATG+TGG - chr2_2:12900784-12900803 None:intergenic 35.0%
! AATACGAATGATGATGAGTG+GGG + chr2_2:12900926-12900945 Msa0238960:CDS 35.0%
!! AAGCTGAAGAAGGTTTTGAT+TGG + chr2_2:12901010-12901029 Msa0238960:CDS 35.0%
!!! TGAAGAAGGTTTTGATTGGT+TGG + chr2_2:12901014-12901033 Msa0238960:CDS 35.0%
CAATGGAAATAAACCTGCAT+AGG - chr2_2:12901305-12901324 None:intergenic 35.0%
TTATTTCCATTGCTGTCAAG+CGG + chr2_2:12901313-12901332 Msa0238960:CDS 35.0%
AATTCTTCAACCTCGAGTAA+TGG - chr2_2:12901346-12901365 None:intergenic 35.0%
TCGAACTTCAAATTTGGCAT+TGG - chr2_2:12901452-12901471 None:intergenic 35.0%
TGGACTTCGAACTTCAAATT+TGG - chr2_2:12901458-12901477 None:intergenic 35.0%
ATAAACGAAAAGGAGAACCA+CGG - chr2_2:12901499-12901518 None:intergenic 35.0%
CCGACAAATTATTCCAATCA+AGG + chr2_2:12901575-12901594 Msa0238960:intron 35.0%
ATATGAGCTTGATCCTTGAT+TGG - chr2_2:12901591-12901610 None:intergenic 35.0%
!! AAGTTTGAAGAAGGTGTCAT+AGG + chr2_2:12901708-12901727 Msa0238960:CDS 35.0%
ATTGACCTATCACCTTTCAA+AGG + chr2_2:12901792-12901811 Msa0238960:CDS 35.0%
! ATATGCCTTTGAAAGGTGAT+AGG - chr2_2:12901800-12901819 None:intergenic 35.0%
GAAAGAGACTGAGAAAGTGA+CGG + chr2_2:12894650-12894669 Msa0238960:CDS 40.0%
!!! CGTTGGTTGGTTCGTTTTAT+GGG + chr2_2:12894700-12894719 Msa0238960:CDS 40.0%
! GATGCCTTGAGTTTGCTTAA+TGG + chr2_2:12894819-12894838 Msa0238960:CDS 40.0%
CAATGGAAATAAACCGGCAA+AGG - chr2_2:12895483-12895502 None:intergenic 40.0%
! CAGCAAACAGAACAGAGTTT+TGG - chr2_2:12895580-12895599 None:intergenic 40.0%
CAAAACTCTGTTCTGTTTGC+TGG + chr2_2:12895578-12895597 Msa0238960:CDS 40.0%
!! TTTGGCATTGGTACTAATGG+AGG - chr2_2:12895618-12895637 None:intergenic 40.0%
TCATTTCTCTCCTAACTGGA+GGG - chr2_2:12895710-12895729 None:intergenic 40.0%
ATCATTTCTCTCCTAACTGG+AGG - chr2_2:12895711-12895730 None:intergenic 40.0%
TCTAATGAGTCTGTGAGTTG+TGG - chr2_2:12896008-12896027 None:intergenic 40.0%
AGATGCGTAGTTCTTCATCA+AGG - chr2_2:12896205-12896224 None:intergenic 40.0%
ATGAAGAACTACGCATCTCA+AGG + chr2_2:12896207-12896226 Msa0238960:intron 40.0%
TGAAGAACTACGCATCTCAA+GGG + chr2_2:12896208-12896227 Msa0238960:intron 40.0%
GGTAACAATGCAAGAGGAAA+CGG + chr2_2:12896620-12896639 Msa0238960:intron 40.0%
!!! GCTCTTGCAGCTTTTTTAAG+TGG + chr2_2:12896890-12896909 Msa0238960:intron 40.0%
AAATGAGGTTGCTCATGTCT+TGG - chr2_2:12897044-12897063 None:intergenic 40.0%
CACAAGATTCACAAACTCTC+GGG - chr2_2:12897089-12897108 None:intergenic 40.0%
CCACAAGATTCACAAACTCT+CGG - chr2_2:12897090-12897109 None:intergenic 40.0%
! GAATTTTGCAGCTGTTCATG+CGG - chr2_2:12897289-12897308 None:intergenic 40.0%
TCCCTAAACAGAACAGGAAT+CGG - chr2_2:12897360-12897379 None:intergenic 40.0%
TGTTACGGAAACAGCAATAG+AGG + chr2_2:12897455-12897474 Msa0238960:intron 40.0%
GTTACGGAAACAGCAATAGA+GGG + chr2_2:12897456-12897475 Msa0238960:intron 40.0%
CTTGCTGCAACAAAACAGAT+TGG + chr2_2:12897532-12897551 Msa0238960:intron 40.0%
CTGCAACAAAACAGATTGGT+TGG + chr2_2:12897536-12897555 Msa0238960:intron 40.0%
CTCGTGTGCTCATTGAATAA+TGG - chr2_2:12897569-12897588 None:intergenic 40.0%
TAAGAATGAGTCGTGTGCTA+TGG - chr2_2:12897604-12897623 None:intergenic 40.0%
!! TTGGAAGCATCGGAATTTGA+AGG - chr2_2:12897637-12897656 None:intergenic 40.0%
TCAAATTCCGATGCTTCCAA+AGG + chr2_2:12897637-12897656 Msa0238960:intron 40.0%
TGATTCTGTTCATGAGGACA+TGG - chr2_2:12897835-12897854 None:intergenic 40.0%
GAGTTGTGATTCTGTTCATG+AGG - chr2_2:12897841-12897860 None:intergenic 40.0%
AGAATCACAACTCACGCAAT+TGG + chr2_2:12897848-12897867 Msa0238960:intron 40.0%
ATAGTTGCATTCATGTGTCG+CGG - chr2_2:12897924-12897943 None:intergenic 40.0%
! ACTATGTTTTTCACCTTCGG+AGG + chr2_2:12897939-12897958 Msa0238960:intron 40.0%
! CTATGTTTTTCACCTTCGGA+GGG + chr2_2:12897940-12897959 Msa0238960:intron 40.0%
!! GGAGTACTTCCCATTCTTTT+CGG + chr2_2:12898058-12898077 Msa0238960:intron 40.0%
! TTTGGAACGCCGAAAAGAAT+GGG - chr2_2:12898070-12898089 None:intergenic 40.0%
! ATTTGGAACGCCGAAAAGAA+TGG - chr2_2:12898071-12898090 None:intergenic 40.0%
TTTCGGCGTTCCAAATAATC+TGG + chr2_2:12898075-12898094 Msa0238960:intron 40.0%
! TTATCAACTTGCTCTACCAG+AGG + chr2_2:12898101-12898120 Msa0238960:intron 40.0%
AGTATAGACAGTAGCATACC+GGG - chr2_2:12898248-12898267 None:intergenic 40.0%
CTTTCACCATTCGACAACTA+CGG + chr2_2:12898266-12898285 Msa0238960:intron 40.0%
ATGCTCCTCCAAACATAACT+CGG + chr2_2:12898368-12898387 Msa0238960:intron 40.0%
! TTGAGCTATGCATTGGTACT+AGG + chr2_2:12898523-12898542 Msa0238960:intron 40.0%
TGGTACTAGGATGTCCAATT+CGG + chr2_2:12898536-12898555 Msa0238960:intron 40.0%
TTATTATTGGGGTGTGTCAC+TGG - chr2_2:12899266-12899285 None:intergenic 40.0%
TACATCACTTTGCGGGAATT+TGG + chr2_2:12899540-12899559 Msa0238960:intron 40.0%
! ATTGGTTAGCCATCAGAGTT+TGG + chr2_2:12900138-12900157 Msa0238960:intron 40.0%
TGGTACTAAACATGGGAAGT+GGG - chr2_2:12900290-12900309 None:intergenic 40.0%
ATGGTACTAAACATGGGAAG+TGG - chr2_2:12900291-12900310 None:intergenic 40.0%
GAGATTGCATCACATGTGAT+AGG + chr2_2:12900460-12900479 Msa0238960:intron 40.0%
GCAGCTAACAAATTCGTGTT+TGG + chr2_2:12900550-12900569 Msa0238960:intron 40.0%
!! GTTTGGATTTATGGTTCGGT+AGG + chr2_2:12900567-12900586 Msa0238960:intron 40.0%
!! ATGATGGATGGAGTGAAACA+TGG - chr2_2:12900666-12900685 None:intergenic 40.0%
GTGTGTTTATGTGGAGAAGT+TGG - chr2_2:12900775-12900794 None:intergenic 40.0%
ATGGTCGATGGAGAAATTGA+AGG - chr2_2:12900824-12900843 None:intergenic 40.0%
AAACCATCAGCCAACACAAT+CGG - chr2_2:12900881-12900900 None:intergenic 40.0%
!!! TTGTGTTGGCTGATGGTTTT+AGG + chr2_2:12900882-12900901 Msa0238960:CDS 40.0%
GATAGTGACAGAAAGTGAGA+CGG + chr2_2:12900985-12901004 Msa0238960:CDS 40.0%
AGCAACTAGTGAAACAAGAG+CGG + chr2_2:12901063-12901082 Msa0238960:CDS 40.0%
! TGAGTTTGCTCGATGGAAAA+TGG + chr2_2:12901149-12901168 Msa0238960:CDS 40.0%
TTCAGCAGCTAACAAACTCA+TGG + chr2_2:12901254-12901273 Msa0238960:intron 40.0%
TATTTCCATTGCTGTCAAGC+GGG + chr2_2:12901314-12901333 Msa0238960:CDS 40.0%
!! TTTGGCATTGGTACTAATGG+AGG - chr2_2:12895618-12895637 None:intergenic 40.0%
TCGAAGTCCAAATCGTTTGA+AGG + chr2_2:12901468-12901487 Msa0238960:CDS 40.0%
GGACAAACCTTCAAACGATT+TGG - chr2_2:12901478-12901497 None:intergenic 40.0%
! TTCACATAACTAGAGCGTCA+AGG - chr2_2:12901528-12901547 None:intergenic 40.0%
AATTGTTTGCACAACCGATG+AGG - chr2_2:12901844-12901863 None:intergenic 40.0%
TTGGAGATTGGGATCTTCAA+TGG - chr2_2:12901879-12901898 None:intergenic 40.0%
TTGGTTGAGGTTTGAGAGAG+AGG - chr2_2:12894421-12894440 None:intergenic 45.0%
! TTGTGTGGAGAAGTTGGTTG+AGG - chr2_2:12894434-12894453 None:intergenic 45.0%
!! TTACTGGAAGGGTGTTTGTG+TGG - chr2_2:12894449-12894468 None:intergenic 45.0%
GTTGAGAGAGGTTACTGGAA+GGG - chr2_2:12894460-12894479 None:intergenic 45.0%
AGTTGAGAGAGGTTACTGGA+AGG - chr2_2:12894461-12894480 None:intergenic 45.0%
ATGGTCGATGGAGAAGTTGA+AGG - chr2_2:12894489-12894508 None:intergenic 45.0%
GCTCAAAAAACCGAACGTGA+TGG - chr2_2:12894508-12894527 None:intergenic 45.0%
TGTCAGAAGACCGATTGTGT+TGG + chr2_2:12894533-12894552 Msa0238960:CDS 45.0%
AAACCATCGGCCAACACAAT+CGG - chr2_2:12894546-12894565 None:intergenic 45.0%
!! AGAAAGTGACGGATAGTGAG+AGG + chr2_2:12894661-12894680 Msa0238960:CDS 45.0%
!! GAAAGTGACGGATAGTGAGA+GGG + chr2_2:12894662-12894681 Msa0238960:CDS 45.0%
!!! GCGTTGGTTGGTTCGTTTTA+TGG + chr2_2:12894699-12894718 Msa0238960:CDS 45.0%
! TCGTTTTATGGGACTGATCG+TGG + chr2_2:12894711-12894730 Msa0238960:CDS 45.0%
! ACTCAAGGCATCAGTAGAAG+CGG - chr2_2:12894811-12894830 None:intergenic 45.0%
!! ACATGGAAGGCGTCAACAAT+GGG - chr2_2:12895140-12895159 None:intergenic 45.0%
!! AACATGGAAGGCGTCAACAA+TGG - chr2_2:12895141-12895160 None:intergenic 45.0%
TGATGGCCAATGGTAACAAG+AGG + chr2_2:12895328-12895347 Msa0238960:intron 45.0%
CTAATGGAGGTGGTAGACAA+TGG - chr2_2:12895605-12895624 None:intergenic 45.0%
GGACAAACCTGCAAACGATT+TGG - chr2_2:12895656-12895675 None:intergenic 45.0%
TCTTACTTGACCCTCCAGTT+AGG + chr2_2:12895697-12895716 Msa0238960:intron 45.0%
!! AAGTTTGAGGAAGGCGTCAT+AGG + chr2_2:12895978-12895997 Msa0238960:intron 45.0%
AATTGTTTGCACGACGGATG+AGG - chr2_2:12896114-12896133 None:intergenic 45.0%
GAAATTGGGATCTTCAACGG+AGG - chr2_2:12896146-12896165 None:intergenic 45.0%
! GAGCGTTGTCGTTGGAAATT+GGG - chr2_2:12896160-12896179 None:intergenic 45.0%
! TGAGCGTTGTCGTTGGAAAT+TGG - chr2_2:12896161-12896180 None:intergenic 45.0%
GAAGAACTACGCATCTCAAG+GGG + chr2_2:12896209-12896228 Msa0238960:intron 45.0%
! TACGTGACCTGTAAGCATTG+AGG + chr2_2:12896573-12896592 Msa0238960:intron 45.0%
!! AAGCATTGAGGCTAGTGCTT+AGG + chr2_2:12896585-12896604 Msa0238960:intron 45.0%
AGGCTAGTGCTTAGGTCTAA+TGG + chr2_2:12896593-12896612 Msa0238960:intron 45.0%
GTGCTTAGGTCTAATGGCAT+AGG + chr2_2:12896599-12896618 Msa0238960:intron 45.0%
GGCATAGGTAACAATGCAAG+AGG + chr2_2:12896614-12896633 Msa0238960:intron 45.0%
AAGATTCACAAACTCTCGGG+TGG - chr2_2:12897086-12897105 None:intergenic 45.0%
CCGAGAGTTTGTGAATCTTG+TGG + chr2_2:12897087-12897106 Msa0238960:intron 45.0%
!! GGACTCTAGAACAACACAGA+TGG - chr2_2:12897183-12897202 None:intergenic 45.0%
ATGTGTGTCAGAGATGACGA+GGG - chr2_2:12897336-12897355 None:intergenic 45.0%
!! TGCCGATTCCTGTTCTGTTT+AGG + chr2_2:12897355-12897374 Msa0238960:intron 45.0%
! GCCGATTCCTGTTCTGTTTA+GGG + chr2_2:12897356-12897375 Msa0238960:intron 45.0%
TCTCAGTCCCTAAACAGAAC+AGG - chr2_2:12897366-12897385 None:intergenic 45.0%
AGCTTCTGCTCATCATGAAC+AGG - chr2_2:12897514-12897533 None:intergenic 45.0%
! TTTGGAGCCTTTGGAAGCAT+CGG - chr2_2:12897647-12897666 None:intergenic 45.0%
!!! CAGTAGTGTTTTGGAGCCTT+TGG - chr2_2:12897656-12897675 None:intergenic 45.0%
! AGCGAATGGCAGTAGTGTTT+TGG - chr2_2:12897665-12897684 None:intergenic 45.0%
CATTCGCTGTTTGTGATCTG+CGG + chr2_2:12897677-12897696 Msa0238960:intron 45.0%
TCACAACTCACGCAATTGGT+TGG + chr2_2:12897852-12897871 Msa0238960:intron 45.0%
TCACGCAATTGGTTGGACAA+TGG + chr2_2:12897859-12897878 Msa0238960:intron 45.0%
CGCATACGGTTGCAAGATAA+AGG - chr2_2:12897888-12897907 None:intergenic 45.0%
! GAAATTTAAGGTCCCTCCGA+AGG - chr2_2:12897955-12897974 None:intergenic 45.0%
! GTCTATTTTACGGACACCTC+TGG - chr2_2:12898120-12898139 None:intergenic 45.0%
! GCATGTTTTCAGCGATGACT+TGG - chr2_2:12898147-12898166 None:intergenic 45.0%
AGTCATCGCTGAAAACATGC+CGG + chr2_2:12898147-12898166 Msa0238960:intron 45.0%
TGGAAAGTAATTGCAAGCGG+TGG - chr2_2:12898187-12898206 None:intergenic 45.0%
GGCTGGAAAGTAATTGCAAG+CGG - chr2_2:12898190-12898209 None:intergenic 45.0%
TATAGACAGTAGCATACCGG+GGG - chr2_2:12898246-12898265 None:intergenic 45.0%
GTATAGACAGTAGCATACCG+GGG - chr2_2:12898247-12898266 None:intergenic 45.0%
AACTACGGTGCATCGAGAAT+TGG + chr2_2:12898281-12898300 Msa0238960:intron 45.0%
GCAAAATGGATGATTGGCAC+CGG - chr2_2:12898317-12898336 None:intergenic 45.0%
AGCTAGGTTCATTGTTCGTG+GGG - chr2_2:12898342-12898361 None:intergenic 45.0%
GAGCTAGGTTCATTGTTCGT+GGG - chr2_2:12898343-12898362 None:intergenic 45.0%
AGAGTGGTTGAGCTATGCAT+TGG + chr2_2:12898516-12898535 Msa0238960:intron 45.0%
ACATACAAAGCGATCAACCG+AGG - chr2_2:12898714-12898733 None:intergenic 45.0%
GGGTTACATTAAGGGACGAA+GGG - chr2_2:12898906-12898925 None:intergenic 45.0%
GCAAAGGGGGGTTACATTAA+GGG - chr2_2:12898914-12898933 None:intergenic 45.0%
TGCAAAGGGGGGTTACATTA+AGG - chr2_2:12898915-12898934 None:intergenic 45.0%
TGGGTGGTTACATTAAGGGA+CGG + chr2_2:12899156-12899175 Msa0238960:intron 45.0%
TGGTTACATTAAGGGACGGA+GGG + chr2_2:12899160-12899179 Msa0238960:intron 45.0%
!!! TTTTTTTCTAGCTCCGCCAC+TGG - chr2_2:12899422-12899441 None:intergenic 45.0%
ATTCCCGCAAAGTGATGTAG+TGG - chr2_2:12899539-12899558 None:intergenic 45.0%
ATTCCCGCAAAGTGATGTAG+TGG - chr2_2:12899539-12899558 None:intergenic 45.0%
GTGAAATATCTATACGGCCG+TGG + chr2_2:12900193-12900212 Msa0238960:intron 45.0%
ACGTCACATTCTCTATGCCA+CGG - chr2_2:12900213-12900232 None:intergenic 45.0%
AACGGTAGATAGAGCTGCAA+AGG - chr2_2:12900600-12900619 None:intergenic 45.0%
TGGATGGAGTGAAACATGGA+TGG - chr2_2:12900662-12900681 None:intergenic 45.0%
TTATGTGGAGAAGTTGGCTG+AGG - chr2_2:12900769-12900788 None:intergenic 45.0%
CGATGGAGAAATTGAAGGTG+TGG - chr2_2:12900819-12900838 None:intergenic 45.0%
TCTCCATCGACCATCACATT+CGG + chr2_2:12900830-12900849 Msa0238960:CDS 45.0%
AAACCGAATGTGATGGTCGA+TGG - chr2_2:12900836-12900855 None:intergenic 45.0%
GCTCAGAAAACCGAATGTGA+TGG - chr2_2:12900843-12900862 None:intergenic 45.0%
TTCTGAGCAAACATGCCAGA+AGG + chr2_2:12900855-12900874 Msa0238960:CDS 45.0%
!!! TGTTGGCTGATGGTTTTAGG+TGG + chr2_2:12900885-12900904 Msa0238960:CDS 45.0%
!! TGGTTTTACGGGATTGATCG+TGG + chr2_2:12901034-12901053 Msa0238960:CDS 45.0%
! TCAAAGCATCAGTGGAAGCA+GGG - chr2_2:12901132-12901151 None:intergenic 45.0%
! GAGCAAACTCAAAGCATCAG+TGG - chr2_2:12901140-12901159 None:intergenic 45.0%
! GATGCTTTGAGTTTGCTCGA+TGG + chr2_2:12901142-12901161 Msa0238960:CDS 45.0%
GCAGCTAACAAACTCATGGT+TGG + chr2_2:12901258-12901277 Msa0238960:intron 45.0%
CATGGTTGGATTTATTCCGC+AGG + chr2_2:12901272-12901291 Msa0238960:intron 45.0%
CTGCATAGGATGTATACCTG+CGG - chr2_2:12901291-12901310 None:intergenic 45.0%
! CAGCAAACAGAACGGAGTTT+TGG - chr2_2:12901402-12901421 None:intergenic 45.0%
CAAAACTCCGTTCTGTTTGC+TGG + chr2_2:12901400-12901419 Msa0238960:CDS 45.0%
CAATGGACCAGCAAACAGAA+CGG - chr2_2:12895588-12895607 None:intergenic 45.0%
CTAATGGAGGAGGTAGTCAA+TGG - chr2_2:12901427-12901446 None:intergenic 45.0%
ATCGTTTGAAGGTTTGTCCG+TGG + chr2_2:12901479-12901498 Msa0238960:intron 45.0%
TCTAATGAGTCTGTCAGCTG+TGG - chr2_2:12901738-12901757 None:intergenic 45.0%
TGTCCAAAACACTGCCTCAT+CGG + chr2_2:12896097-12896116 Msa0238960:intron 45.0%
GATCTTCAATGGAGGCTGAT+CGG - chr2_2:12901868-12901887 None:intergenic 45.0%
GAGATTGGGATCTTCAATGG+AGG - chr2_2:12901876-12901895 None:intergenic 45.0%
GAGCATAGCTGTTGGAGATT+GGG - chr2_2:12901890-12901909 None:intergenic 45.0%
TGAGCATAGCTGTTGGAGAT+TGG - chr2_2:12901891-12901910 None:intergenic 45.0%
CCATGATTGAGCATAGCTGT+TGG - chr2_2:12901898-12901917 None:intergenic 45.0%
CCAACAGCTATGCTCAATCA+TGG + chr2_2:12901895-12901914 Msa0238960:CDS 45.0%
!! GAATAAATAAATAAAAAATA+TGG + chr2_2:12895047-12895066 Msa0238960:intron 5.0%
!! AATTTAAATAATTCAATTAT+AGG - chr2_2:12899505-12899524 None:intergenic 5.0%
!!! ATTGAATTATTTAAATTTTT+CGG + chr2_2:12899508-12899527 Msa0238960:intron 5.0%
!! AATTTAAATAATTCAATTAT+AGG - chr2_2:12899505-12899524 None:intergenic 5.0%
!!! ATTGAATTATTTAAATTTTT+CGG + chr2_2:12899508-12899527 Msa0238960:intron 5.0%
GGGTGTTTGTGTGGAGAAGT+TGG - chr2_2:12894440-12894459 None:intergenic 50.0%
GTGGAGTTGAGAGAGGTTAC+TGG - chr2_2:12894465-12894484 None:intergenic 50.0%
! TGAAGGTGTGGAGTTGAGAG+AGG - chr2_2:12894472-12894491 None:intergenic 50.0%
CGATGGAGAAGTTGAAGGTG+TGG - chr2_2:12894484-12894503 None:intergenic 50.0%
TCTCCATCGACCATCACGTT+CGG + chr2_2:12894495-12894514 Msa0238960:CDS 50.0%
AAACCGAACGTGATGGTCGA+TGG - chr2_2:12894501-12894520 None:intergenic 50.0%
! TTGTGTTGGCCGATGGTTTG+AGG + chr2_2:12894547-12894566 Msa0238960:CDS 50.0%
TGAGAGGGAGAAGCTGAAGA+AGG + chr2_2:12894677-12894696 Msa0238960:CDS 50.0%
!! AAGCTGAAGAAGGCGTTGGT+TGG + chr2_2:12894687-12894706 Msa0238960:CDS 50.0%
! CTCAAGGCATCAGTAGAAGC+GGG - chr2_2:12894810-12894829 None:intergenic 50.0%
CAATGGGGATGTAGCTCAGA+TGG - chr2_2:12895124-12895143 None:intergenic 50.0%
!! CATGGAAGGCGTCAACAATG+GGG - chr2_2:12895139-12895158 None:intergenic 50.0%
GCATCACATGTGATGGCCAA+TGG + chr2_2:12895318-12895337 Msa0238960:intron 50.0%
!! GGTTTGATTTGTGGTTCCGC+AGG + chr2_2:12895450-12895469 Msa0238960:intron 50.0%
CGGCAAAGGATGTATACCTG+CGG - chr2_2:12895469-12895488 None:intergenic 50.0%
CGCAGGTATACATCCTTTGC+CGG + chr2_2:12895467-12895486 Msa0238960:intron 50.0%
AGTAGTCCGCTCGAAAGCAA+TGG - chr2_2:12895500-12895519 None:intergenic 50.0%
!! GGCATTGGTACTAATGGAGG+TGG - chr2_2:12895615-12895634 None:intergenic 50.0%
GATCTTCAACGGAGGCTGAT+TGG - chr2_2:12896138-12896157 None:intergenic 50.0%
! CCATGATTGAGCGTTGTCGT+TGG - chr2_2:12896168-12896187 None:intergenic 50.0%
CCAACGACAACGCTCAATCA+TGG + chr2_2:12896165-12896184 Msa0238960:intron 50.0%
! GCACTAGCCTCAATGCTTAC+AGG - chr2_2:12896583-12896602 None:intergenic 50.0%
GCTGCAAGAGCCACTTGAAA+TGG - chr2_2:12896881-12896900 None:intergenic 50.0%
GTTGATGTCGGAGAAGCCTT+TGG - chr2_2:12897267-12897286 None:intergenic 50.0%
! GCTGTTCATGCGGTTGATGT+CGG - chr2_2:12897279-12897298 None:intergenic 50.0%
CATGTGTGTCAGAGATGACG+AGG - chr2_2:12897337-12897356 None:intergenic 50.0%
CGCAGATCACAAACAGCGAA+TGG - chr2_2:12897679-12897698 None:intergenic 50.0%
TGCTGTCCAAACTGCAGACA+CGG - chr2_2:12897739-12897758 None:intergenic 50.0%
TACAGGCTTGGAACATGGCA+GGG - chr2_2:12897782-12897801 None:intergenic 50.0%
ATACAGGCTTGGAACATGGC+AGG - chr2_2:12897783-12897802 None:intergenic 50.0%
TTCCAAGCCTGTATCGCGAA+AGG + chr2_2:12897789-12897808 Msa0238960:intron 50.0%
TTCCTTTCGCGATACAGGCT+TGG - chr2_2:12897794-12897813 None:intergenic 50.0%
TCTTGCAACCGTATGCGAGT+TGG + chr2_2:12897891-12897910 Msa0238960:intron 50.0%
CTTGCAACCGTATGCGAGTT+GGG + chr2_2:12897892-12897911 Msa0238960:intron 50.0%
CAAATAGCTGACCAATCGCC+CGG + chr2_2:12897975-12897994 Msa0238960:intron 50.0%
ACGTCTCACCTCCATAAACC+GGG - chr2_2:12897996-12898015 None:intergenic 50.0%
CACGTCTCACCTCCATAAAC+CGG - chr2_2:12897997-12898016 None:intergenic 50.0%
TTACGAACATTGTGTGCCCC+CGG + chr2_2:12898227-12898246 Msa0238960:intron 50.0%
GATGCACCGTAGTTGTCGAA+TGG - chr2_2:12898275-12898294 None:intergenic 50.0%
! GGGGGTGCAAAATGGATGAT+TGG - chr2_2:12898323-12898342 None:intergenic 50.0%
! TTGTTCGTGGGGGTGCAAAA+TGG - chr2_2:12898331-12898350 None:intergenic 50.0%
GCTAGGTTCATTGTTCGTGG+GGG - chr2_2:12898341-12898360 None:intergenic 50.0%
CGAGCTAGGTTCATTGTTCG+TGG - chr2_2:12898344-12898363 None:intergenic 50.0%
GGGGTTACATTAAGGGACGA+AGG - chr2_2:12898907-12898926 None:intergenic 50.0%
GTGGTTACATTAAGGGACGG+AGG + chr2_2:12899159-12899178 Msa0238960:intron 50.0%
TGGGCCACTACATCACTTTG+CGG + chr2_2:12899532-12899551 Msa0238960:intron 50.0%
TGGGCCACTACATCACTTTG+CGG + chr2_2:12899532-12899551 Msa0238960:intron 50.0%
! ACAGCTTTGGTGGAGTTCAG+TGG - chr2_2:12899797-12899816 None:intergenic 50.0%
GGAGTGAAACATGGATGGTG+TGG - chr2_2:12900657-12900676 None:intergenic 50.0%
TTGGCTGAGGTTTGAGAGAG+AGG - chr2_2:12900756-12900775 None:intergenic 50.0%
GTGGAGTTGAGAGAGGTTAC+TGG - chr2_2:12894465-12894484 None:intergenic 50.0%
! TGAAGGTGTGGAGTTGAGAG+AGG - chr2_2:12894472-12894491 None:intergenic 50.0%
!!! GGCTGATGGTTTTAGGTGGA+TGG + chr2_2:12900889-12900908 Msa0238960:CDS 50.0%
TGAGACGGAGAAGCTGAAGA+AGG + chr2_2:12901000-12901019 Msa0238960:CDS 50.0%
! CAAAGCATCAGTGGAAGCAG+GGG - chr2_2:12901131-12901150 None:intergenic 50.0%
! CTCAAAGCATCAGTGGAAGC+AGG - chr2_2:12901133-12901152 None:intergenic 50.0%
CGCAGGTATACATCCTATGC+AGG + chr2_2:12901289-12901308 Msa0238960:intron 50.0%
!! GGCATTGGTACTAATGGAGG+AGG - chr2_2:12895615-12895634 None:intergenic 50.0%
! CAACCGATGAGGCAGTGTTT+TGG - chr2_2:12901833-12901852 None:intergenic 50.0%
CGACGCGTAGTTCTTCATCA+AGG - chr2_2:12901935-12901954 None:intergenic 50.0%
ATGAAGAACTACGCGTCGCA+AGG + chr2_2:12901937-12901956 Msa0238960:CDS 50.0%
TGAAGAACTACGCGTCGCAA+GGG + chr2_2:12901938-12901957 Msa0238960:CDS 50.0%
! AGACCGATTGTGTTGGCCGA+TGG + chr2_2:12894540-12894559 Msa0238960:CDS 55.0%
TGTTGGCCGATGGTTTGAGG+CGG + chr2_2:12894550-12894569 Msa0238960:CDS 55.0%
! GGAGAAGCTGAAGAAGGCGT+TGG + chr2_2:12894683-12894702 Msa0238960:CDS 55.0%
GCATCAGTAGAAGCGGGTGT+GGG - chr2_2:12894804-12894823 None:intergenic 55.0%
! CTTAGCATGCGAGAGGTACG+GGG - chr2_2:12895090-12895109 None:intergenic 55.0%
! GCTTAGCATGCGAGAGGTAC+GGG - chr2_2:12895091-12895110 None:intergenic 55.0%
CGCTTAGCATGCGAGAGGTA+CGG - chr2_2:12895092-12895111 None:intergenic 55.0%
! CGACGGATGAGGCAGTGTTT+TGG - chr2_2:12896103-12896122 None:intergenic 55.0%
CTACGCATCTCAAGGGGTGA+TGG + chr2_2:12896215-12896234 Msa0238960:intron 55.0%
GAGGTTGCTCATGTCTTGGC+AGG - chr2_2:12897040-12897059 None:intergenic 55.0%
! GATGGCTTTTTACGCGCGCA+AGG - chr2_2:12897165-12897184 None:intergenic 55.0%
CATTTGTGTCTCCCGCGAGA+GGG + chr2_2:12897405-12897424 Msa0238960:intron 55.0%
ATTTGTGTCTCCCGCGAGAG+GGG + chr2_2:12897406-12897425 Msa0238960:intron 55.0%
TTCCGTAACAGCACCTGCAC+CGG - chr2_2:12897445-12897464 None:intergenic 55.0%
TGAGTCGTGTGCTATGGTCG+TGG - chr2_2:12897598-12897617 None:intergenic 55.0%
CGCGATACAGGCTTGGAACA+TGG - chr2_2:12897787-12897806 None:intergenic 55.0%
GCTGTCTCCCAACTCGCATA+CGG - chr2_2:12897902-12897921 None:intergenic 55.0%
! CGGGCGATTGGTCAGCTATT+TGG - chr2_2:12897977-12897996 None:intergenic 55.0%
CTGACCAATCGCCCGGTTTA+TGG + chr2_2:12897982-12898001 Msa0238960:intron 55.0%
ACCAATCGCCCGGTTTATGG+AGG + chr2_2:12897985-12898004 Msa0238960:intron 55.0%
ACCTCCATAAACCGGGCGAT+TGG - chr2_2:12897989-12898008 None:intergenic 55.0%
!! GGAGGAGCATTCTTCGAGCT+AGG - chr2_2:12898358-12898377 None:intergenic 55.0%
! GTGTTTGAGACCGCTGTCCT+CGG + chr2_2:12898694-12898713 Msa0238960:intron 55.0%
AAGCGATCAACCGAGGACAG+CGG - chr2_2:12898707-12898726 None:intergenic 55.0%
!! TCCTCGGTGCCAGTTTGAGT+AGG - chr2_2:12898811-12898830 None:intergenic 55.0%
GGGCCACTACATCACTTTGC+GGG + chr2_2:12899533-12899552 Msa0238960:intron 55.0%
GGGCCACTACATCACTTTGC+GGG + chr2_2:12899533-12899552 Msa0238960:intron 55.0%
GCTTTGGTGGAGTTCAGTGG+CGG - chr2_2:12899794-12899813 None:intergenic 55.0%
TGCCAGAAGGCCGATTGTGT+TGG + chr2_2:12900868-12900887 Msa0238960:CDS 55.0%
AGCCAACACAATCGGCCTTC+TGG - chr2_2:12900873-12900892 None:intergenic 55.0%
!! AGGCCGATTGTGTTGGCTGA+TGG + chr2_2:12900875-12900894 Msa0238960:CDS 55.0%
TTCAGAGCCTTCTGCCGATG+TGG + chr2_2:12900949-12900968 Msa0238960:intron 55.0%
TTCTGCCGATGTGGCAGTTG+CGG + chr2_2:12900958-12900977 Msa0238960:intron 55.0%
AGTAGCCCGCTTGACAGCAA+TGG - chr2_2:12901322-12901341 None:intergenic 55.0%
GAAGAACTACGCGTCGCAAG+GGG + chr2_2:12901939-12901958 Msa0238960:CDS 55.0%
! GTTGGCCGATGGTTTGAGGC+GGG + chr2_2:12894551-12894570 Msa0238960:CDS 60.0%
TGAGGCGGGCGGTGTATGTT+CGG + chr2_2:12894565-12894584 Msa0238960:CDS 60.0%
GGCATCAGTAGAAGCGGGTG+TGG - chr2_2:12894805-12894824 None:intergenic 60.0%
! CGCATCTCAAGGGGTGATGG+TGG + chr2_2:12896218-12896237 Msa0238960:intron 60.0%
GCATTTGTGTCTCCCGCGAG+AGG + chr2_2:12897404-12897423 Msa0238960:intron 60.0%
AAGAAGCAGCTCCCCTCTCG+CGG - chr2_2:12897420-12897439 None:intergenic 60.0%
GAGGGGAGCTGCTTCTTCAC+CGG + chr2_2:12897423-12897442 Msa0238960:intron 60.0%
AGCTGCTTCTTCACCGGTGC+AGG + chr2_2:12897429-12897448 Msa0238960:intron 60.0%
!! CACCGGTGCAGGTGCTGTTA+CGG + chr2_2:12897440-12897459 Msa0238960:intron 60.0%
CAGCTGCCGTGTCTGCAGTT+TGG + chr2_2:12897730-12897749 Msa0238960:intron 60.0%
GGCTTGGAACATGGCAGGGT+TGG - chr2_2:12897778-12897797 None:intergenic 60.0%
GCCTACTCAAACTGGCACCG+AGG + chr2_2:12898807-12898826 Msa0238960:intron 60.0%
! AGCCCTTCATGGGCTGAGGT+GGG - chr2_2:12899771-12899790 None:intergenic 60.0%
! TCAGTGGCGGAGCCCTTCAT+GGG - chr2_2:12899781-12899800 None:intergenic 60.0%
! TTCAGTGGCGGAGCCCTTCA+TGG - chr2_2:12899782-12899801 None:intergenic 60.0%
GCAACTGCCACATCGGCAGA+AGG - chr2_2:12900959-12900978 None:intergenic 60.0%
CACCTCCGCAACTGCCACAT+CGG - chr2_2:12900966-12900985 None:intergenic 60.0%
GCATCAGTGGAAGCAGGGGT+AGG - chr2_2:12901127-12901146 None:intergenic 60.0%
CGGGCTACTGCCATTACTCG+AGG + chr2_2:12901333-12901352 Msa0238960:CDS 60.0%
CACCGCCCGCCTCAAACCAT+CGG - chr2_2:12894559-12894578 None:intergenic 65.0%
GAGGCGGGCGGTGTATGTTC+GGG + chr2_2:12894566-12894585 Msa0238960:CDS 65.0%
TGGGGTCCAGAGCCTTCTGC+TGG + chr2_2:12894609-12894628 Msa0238960:intron 65.0%
AGAGCCTTCTGCTGGCGTCG+CGG + chr2_2:12894617-12894636 Msa0238960:intron 65.0%
TTCTGCTGGCGTCGCGGTTG+CGG + chr2_2:12894623-12894642 Msa0238960:CDS 65.0%
GCGCTCGCTTAGCATGCGAG+AGG - chr2_2:12895097-12895116 None:intergenic 65.0%
AGAAGCAGCTCCCCTCTCGC+GGG - chr2_2:12897419-12897438 None:intergenic 65.0%
! GAACATGGCAGGGTTGGCGC+AGG - chr2_2:12897772-12897791 None:intergenic 65.0%
! CCCTTCATGGGCTGAGGTGG+GGG - chr2_2:12899769-12899788 None:intergenic 65.0%
CCCCCACCTCAGCCCATGAA+GGG + chr2_2:12899766-12899785 Msa0238960:intron 65.0%
! GCCCTTCATGGGCTGAGGTG+GGG - chr2_2:12899770-12899789 None:intergenic 65.0%
! GAGCCCTTCATGGGCTGAGG+TGG - chr2_2:12899772-12899791 None:intergenic 65.0%
TGCCGATGTGGCAGTTGCGG+AGG + chr2_2:12900961-12900980 Msa0238960:intron 65.0%
CTACGCGTCGCAAGGGGTGA+TGG + chr2_2:12901945-12901964 Msa0238960:CDS 65.0%
! GGCCGATGGTTTGAGGCGGG+CGG + chr2_2:12894554-12894573 Msa0238960:CDS 70.0%
GCGACGCCAGCAGAAGGCTC+TGG - chr2_2:12894618-12894637 None:intergenic 70.0%
GCAACCGCGACGCCAGCAGA+AGG - chr2_2:12894624-12894643 None:intergenic 70.0%
GCCCCCACCTCAGCCCATGA+AGG + chr2_2:12899765-12899784 Msa0238960:intron 70.0%
! GCGGAGCCCTTCATGGGCTG+AGG - chr2_2:12899775-12899794 None:intergenic 70.0%
! CGCGTCGCAAGGGGTGATGG+TGG + chr2_2:12901948-12901967 Msa0238960:CDS 70.0%
TGCTGGCGTCGCGGTTGCGG+AGG + chr2_2:12894626-12894645 Msa0238960:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 12894414 12902019 12894414 ID=Msa0238960;Name=Msa0238960
chr2_2 mRNA 12894414 12902019 12894414 ID=Msa0238960-mRNA-1;Parent=Msa0238960;Name=Msa0238960-mRNA-1;_AED=0.19;_eAED=0.20;_QI=0|0.12|0|1|0.37|0.22|9|0|498
chr2_2 exon 12894414 12894612 12894414 ID=Msa0238960-mRNA-1:exon:5478;Parent=Msa0238960-mRNA-1
chr2_2 exon 12894619 12894856 12894619 ID=Msa0238960-mRNA-1:exon:5479;Parent=Msa0238960-mRNA-1
chr2_2 exon 12895472 12895532 12895472 ID=Msa0238960-mRNA-1:exon:5480;Parent=Msa0238960-mRNA-1
chr2_2 exon 12895568 12895623 12895568 ID=Msa0238960-mRNA-1:exon:5481;Parent=Msa0238960-mRNA-1
chr2_2 exon 12896410 12896422 12896410 ID=Msa0238960-mRNA-1:exon:5482;Parent=Msa0238960-mRNA-1
chr2_2 exon 12900746 12900967 12900746 ID=Msa0238960-mRNA-1:exon:5483;Parent=Msa0238960-mRNA-1
chr2_2 exon 12900983 12901179 12900983 ID=Msa0238960-mRNA-1:exon:5484;Parent=Msa0238960-mRNA-1
chr2_2 exon 12901294 12901489 12901294 ID=Msa0238960-mRNA-1:exon:5485;Parent=Msa0238960-mRNA-1
chr2_2 exon 12901705 12902019 12901705 ID=Msa0238960-mRNA-1:exon:5486;Parent=Msa0238960-mRNA-1
chr2_2 CDS 12894414 12894612 12894414 ID=Msa0238960-mRNA-1:cds;Parent=Msa0238960-mRNA-1
chr2_2 CDS 12894619 12894856 12894619 ID=Msa0238960-mRNA-1:cds;Parent=Msa0238960-mRNA-1
chr2_2 CDS 12895472 12895532 12895472 ID=Msa0238960-mRNA-1:cds;Parent=Msa0238960-mRNA-1
chr2_2 CDS 12895568 12895623 12895568 ID=Msa0238960-mRNA-1:cds;Parent=Msa0238960-mRNA-1
chr2_2 CDS 12896410 12896422 12896410 ID=Msa0238960-mRNA-1:cds;Parent=Msa0238960-mRNA-1
chr2_2 CDS 12900746 12900967 12900746 ID=Msa0238960-mRNA-1:cds;Parent=Msa0238960-mRNA-1
chr2_2 CDS 12900983 12901179 12900983 ID=Msa0238960-mRNA-1:cds;Parent=Msa0238960-mRNA-1
chr2_2 CDS 12901294 12901489 12901294 ID=Msa0238960-mRNA-1:cds;Parent=Msa0238960-mRNA-1
chr2_2 CDS 12901705 12902019 12901705 ID=Msa0238960-mRNA-1:cds;Parent=Msa0238960-mRNA-1
Gene Sequence

>Msa0238960

ATGGCCTCTCTCTCAAACCTCAACCAACTTCTCCACACAAACACCCTTCCAGTAACCTCTCTCAACTCCACACCTTCAACTTCTCCATCGACCATCACGTTCGGTTTTTTGAGCAAACATGTCAGAAGACCGATTGTGTTGGCCGATGGTTTGAGGCGGGCGGTGTATGTTCGGGCTAATACAAATGATGATGAGTGGGAGCCTTCTGCTGGCGTCGCGGTTGCGGAGGTGAAAGAGACTGAGAAAGTGACGGATAGTGAGAGGGAGAAGCTGAAGAAGGCGTTGGTTGGTTCGTTTTATGGGACTGATCGTGGATTGAAAGCGACGAGTGAAACGAGAGCTGAGATTGTTGAGCTGATTACTCAGCTTGAAGCTAAGAATCCCACACCCGCTTCTACTGATGCCTTGAGTTTGCTTAATGGAAAATGGATTCTTGCGTATACATCCTTTGCCGGTTTATTTCCATTGCTTTCGAGCGGACTACTACCATTACTTACATTTAACTGTCCAAAACTCTGTTCTGTTTGCTGGTCCATTGTCTACCACCTCCATTATATCATCCGCGCTAAAATGGCCTCTCTCTCAAACCTCAGCCAACTTCTCCACATAAACACACTTCCAGTAACCTCTCTCAACTCCACACCTTCAATTTCTCCATCGACCATCACATTCGGTTTTCTGAGCAAACATGCCAGAAGGCCGATTGTGTTGGCTGATGGTTTTAGGTGGATGGCGTATGTTCAAGATAATACGAATGATGATGAGTGGGGTTCAGAGCCTTCTGCCGATGTGATAGTGACAGAAAGTGAGACGGAGAAGCTGAAGAAGGTTTTGATTGGTTGGTTTTACGGGATTGATCGTGGATTGAAAGCAACTAGTGAAACAAGAGCGGAGATTGATGAGCTTATTACTCAGCTTGAGTCTCAGAATCCTACCCCTGCTTCCACTGATGCTTTGAGTTTGCTCGATGGAAAATGGATTCTCGCGTATACATCCTATGCAGGTTTATTTCCATTGCTGTCAAGCGGGCTACTGCCATTACTCGAGGTTGAAGAATTATCTCAGACTATTGATTCCGAAAATTTAAGTGTCCAAAACTCCGTTCTGTTTGCTGGTCCATTGACTACCTCCTCCATTAGTACCAATGCCAAATTTGAAGTTCGAAGTCCAAATCGTTTGAAGATCAAGTTTGAAGAAGGTGTCATAGGCACTCCACAGCTGACAGACTCATTAGAGATACCAGAAAATGTGGAATTTTTAGGGAAAGAGATTGACCTATCACCTTTCAAAGGCATATTTACTTCTGTCCAAAACACTGCCTCATCGGTTGTGCAAACAATTTCCGATCAGCCTCCATTGAAGATCCCAATCTCCAACAGCTATGCTCAATCATGGTTGCTTACTACATACCTTGATGAAGAACTACGCGTCGCAAGGGGTGATGGTGGCAGTGTGTTTGTTCTTATTAAGGAAGGAAGTTCTCTCTTGACAAACTAA

Protein sequence

>Msa0238960

MASLSNLNQLLHTNTLPVTSLNSTPSTSPSTITFGFLSKHVRRPIVLADGLRRAVYVRANTNDDEWEPSAGVAVAEVKETEKVTDSEREKLKKALVGSFYGTDRGLKATSETRAEIVELITQLEAKNPTPASTDALSLLNGKWILAYTSFAGLFPLLSSGLLPLLTFNCPKLCSVCWSIVYHLHYIIRAKMASLSNLSQLLHINTLPVTSLNSTPSISPSTITFGFLSKHARRPIVLADGFRWMAYVQDNTNDDEWGSEPSADVIVTESETEKLKKVLIGWFYGIDRGLKATSETRAEIDELITQLESQNPTPASTDALSLLDGKWILAYTSYAGLFPLLSSGLLPLLEVEELSQTIDSENLSVQNSVLFAGPLTTSSISTNAKFEVRSPNRLKIKFEEGVIGTPQLTDSLEIPENVEFLGKEIDLSPFKGIFTSVQNTASSVVQTISDQPPLKIPISNSYAQSWLLTTYLDEELRVARGDGGSVFVLIKEGSSLLTN*