Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1441610 | G7IDW3 | 96.501 | 343 | 11 | 1 | 1 | 343 | 1 | 342 | 0.0 | 667 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa1441610 | 0.821079 | 4.885381e-53 | -8.615850e-47 |
| Msa0003340 | Msa1441610 | 0.806326 | 8.686466e-50 | -8.615850e-47 |
| Msa0013270 | Msa1441610 | -0.807785 | 4.266659e-50 | -8.615850e-47 |
| Msa0016380 | Msa1441610 | 0.809066 | 2.273221e-50 | -8.615850e-47 |
| Msa0027030 | Msa1441610 | 0.804210 | 2.410170e-49 | -8.615850e-47 |
| Msa0037270 | Msa1441610 | 0.826697 | 2.352529e-54 | -8.615850e-47 |
| Msa0038650 | Msa1441610 | 0.948216 | 1.463746e-106 | -8.615850e-47 |
| Msa0038750 | Msa1441610 | 0.816643 | 4.974603e-52 | -8.615850e-47 |
| Msa0040930 | Msa1441610 | -0.801766 | 7.710444e-49 | -8.615850e-47 |
| Msa0044530 | Msa1441610 | 0.826692 | 2.359051e-54 | -8.615850e-47 |
| Msa0044780 | Msa1441610 | 0.842572 | 2.383089e-58 | -8.615850e-47 |
| Msa0046050 | Msa1441610 | 0.820940 | 5.257715e-53 | -8.615850e-47 |
| Msa0046970 | Msa1441610 | -0.804006 | 2.657069e-49 | -8.615850e-47 |
| Msa0065520 | Msa1441610 | 0.810875 | 9.273581e-51 | -8.615850e-47 |
| Msa0065670 | Msa1441610 | 0.838365 | 3.002965e-57 | -8.615850e-47 |
| Msa0081120 | Msa1441610 | 0.833641 | 4.746148e-56 | -8.615850e-47 |
| Msa0086620 | Msa1441610 | 0.829325 | 5.484290e-55 | -8.615850e-47 |
| Msa0089470 | Msa1441610 | 0.801386 | 9.226832e-49 | -8.615850e-47 |
| Msa0091220 | Msa1441610 | 0.811707 | 6.117802e-51 | -8.615850e-47 |
| Msa0091240 | Msa1441610 | 0.818738 | 1.676142e-52 | -8.615850e-47 |
| Msa0095810 | Msa1441610 | 0.812306 | 4.531289e-51 | -8.615850e-47 |
| Msa0095890 | Msa1441610 | 0.814909 | 1.211719e-51 | -8.615850e-47 |
| Msa0111110 | Msa1441610 | 0.829190 | 5.913192e-55 | -8.615850e-47 |
| Msa0120100 | Msa1441610 | 0.823069 | 1.688960e-53 | -8.615850e-47 |
| Msa0120160 | Msa1441610 | 0.819834 | 9.431016e-53 | -8.615850e-47 |
| Msa1350580 | Msa1441610 | 0.819496 | 1.126584e-52 | -8.615850e-47 |
| Msa1352630 | Msa1441610 | 0.820995 | 5.108941e-53 | -8.615850e-47 |
| Msa1373390 | Msa1441610 | 0.802686 | 4.986052e-49 | -8.615850e-47 |
| Msa1381060 | Msa1441610 | 0.817777 | 2.765909e-52 | -8.615850e-47 |
| Msa1404810 | Msa1441610 | 0.813838 | 2.089527e-51 | -8.615850e-47 |
| Msa1405830 | Msa1441610 | -0.801037 | 1.087806e-48 | -8.615850e-47 |
| Msa1406540 | Msa1441610 | -0.801017 | 1.097879e-48 | -8.615850e-47 |
| Msa1408230 | Msa1441610 | 0.801715 | 7.900628e-49 | -8.615850e-47 |
| Msa1412330 | Msa1441610 | 0.814197 | 1.741296e-51 | -8.615850e-47 |
| Msa1428230 | Msa1441610 | 0.814559 | 1.448665e-51 | -8.615850e-47 |
| Msa1436620 | Msa1441610 | -0.824695 | 7.022141e-54 | -8.615850e-47 |
| Msa0603180 | Msa1441610 | 0.816021 | 6.853889e-52 | -8.615850e-47 |
| Msa0606340 | Msa1441610 | 0.805357 | 1.387946e-49 | -8.615850e-47 |
| Msa0608820 | Msa1441610 | -0.816195 | 6.267731e-52 | -8.615850e-47 |
| Msa0610700 | Msa1441610 | 0.824403 | 8.227205e-54 | -8.615850e-47 |
| Msa0638300 | Msa1441610 | 0.807980 | 3.877229e-50 | -8.615850e-47 |
| Msa0644220 | Msa1441610 | 0.837175 | 6.069815e-57 | -8.615850e-47 |
| Msa0657880 | Msa1441610 | 0.810945 | 8.953181e-51 | -8.615850e-47 |
| Msa0661480 | Msa1441610 | -0.801141 | 1.035902e-48 | -8.615850e-47 |
| Msa0677250 | Msa1441610 | 0.800942 | 1.137322e-48 | -8.615850e-47 |
| Msa0684030 | Msa1441610 | 0.847281 | 1.277266e-59 | -8.615850e-47 |
| Msa0691610 | Msa1441610 | -0.811879 | 5.614551e-51 | -8.615850e-47 |
| Msa0707120 | Msa1441610 | 0.870927 | 1.007728e-66 | -8.615850e-47 |
| Msa0719270 | Msa1441610 | -0.816570 | 5.165962e-52 | -8.615850e-47 |
| Msa0745140 | Msa1441610 | -0.826495 | 2.629169e-54 | -8.615850e-47 |
| Msa0753590 | Msa1441610 | 0.820128 | 8.077663e-53 | -8.615850e-47 |
| Msa0770540 | Msa1441610 | 0.812212 | 4.749439e-51 | -8.615850e-47 |
| Msa0776640 | Msa1441610 | -0.827232 | 1.752618e-54 | -8.615850e-47 |
| Msa0790650 | Msa1441610 | 0.833297 | 5.782523e-56 | -8.615850e-47 |
| Msa0792180 | Msa1441610 | 0.809061 | 2.279530e-50 | -8.615850e-47 |
| Msa0795910 | Msa1441610 | 0.809169 | 2.160577e-50 | -8.615850e-47 |
| Msa0823310 | Msa1441610 | 0.807930 | 3.973353e-50 | -8.615850e-47 |
| Msa0825920 | Msa1441610 | -0.826277 | 2.963097e-54 | -8.615850e-47 |
| Msa0833200 | Msa1441610 | 0.812990 | 3.210780e-51 | -8.615850e-47 |
| Msa0833360 | Msa1441610 | 0.809236 | 2.090254e-50 | -8.615850e-47 |
| Msa0840520 | Msa1441610 | -0.824836 | 6.504454e-54 | -8.615850e-47 |
| Msa0133140 | Msa1441610 | 0.820156 | 7.960501e-53 | -8.615850e-47 |
| Msa0136180 | Msa1441610 | 0.803838 | 2.879166e-49 | -8.615850e-47 |
| Msa0137010 | Msa1441610 | 0.821459 | 3.991907e-53 | -8.615850e-47 |
| Msa0142390 | Msa1441610 | 0.813926 | 1.998397e-51 | -8.615850e-47 |
| Msa0167150 | Msa1441610 | 0.814909 | 1.211838e-51 | -8.615850e-47 |
| Msa0175210 | Msa1441610 | 0.802045 | 6.757808e-49 | -8.615850e-47 |
| Msa0175240 | Msa1441610 | 0.814469 | 1.516183e-51 | -8.615850e-47 |
| Msa0183310 | Msa1441610 | 0.808874 | 2.499683e-50 | -8.615850e-47 |
| Msa0193680 | Msa1441610 | -0.807690 | 4.467910e-50 | -8.615850e-47 |
| Msa0225070 | Msa1441610 | 0.801323 | 9.504912e-49 | -8.615850e-47 |
| Msa0229350 | Msa1441610 | 0.804216 | 2.402972e-49 | -8.615850e-47 |
| Msa1255030 | Msa1441610 | 0.819990 | 8.689525e-53 | -8.615850e-47 |
| Msa1256490 | Msa1441610 | 0.804569 | 2.028668e-49 | -8.615850e-47 |
| Msa1266120 | Msa1441610 | 0.847409 | 1.177641e-59 | -8.615850e-47 |
| Msa1267340 | Msa1441610 | 0.811169 | 8.007601e-51 | -8.615850e-47 |
| Msa1286860 | Msa1441610 | 0.821187 | 4.613921e-53 | -8.615850e-47 |
| Msa1287100 | Msa1441610 | 0.833365 | 5.560835e-56 | -8.615850e-47 |
| Msa1295210 | Msa1441610 | 0.831778 | 1.376090e-55 | -8.615850e-47 |
| Msa1295480 | Msa1441610 | 0.832123 | 1.131050e-55 | -8.615850e-47 |
| Msa1296810 | Msa1441610 | 0.801576 | 8.434902e-49 | -8.615850e-47 |
| Msa1297220 | Msa1441610 | 0.815103 | 1.097395e-51 | -8.615850e-47 |
| Msa1298480 | Msa1441610 | 0.803350 | 3.636029e-49 | -8.615850e-47 |
| Msa1332690 | Msa1441610 | 0.839256 | 1.767138e-57 | -8.615850e-47 |
| Msa1338810 | Msa1441610 | 0.818570 | 1.829446e-52 | -8.615850e-47 |
| Msa1342360 | Msa1441610 | 0.806645 | 7.439780e-50 | -8.615850e-47 |
| Msa1343450 | Msa1441610 | 0.806312 | 8.745055e-50 | -8.615850e-47 |
| Msa0371350 | Msa1441610 | 0.825099 | 5.637107e-54 | -8.615850e-47 |
| Msa0382050 | Msa1441610 | 0.808054 | 3.739800e-50 | -8.615850e-47 |
| Msa0387740 | Msa1441610 | 0.804229 | 2.388226e-49 | -8.615850e-47 |
| Msa0403740 | Msa1441610 | 0.800029 | 1.745817e-48 | -8.615850e-47 |
| Msa0412580 | Msa1441610 | 0.842042 | 3.291323e-58 | -8.615850e-47 |
| Msa0428300 | Msa1441610 | 0.801306 | 9.584248e-49 | -8.615850e-47 |
| Msa0431550 | Msa1441610 | 0.806215 | 9.166257e-50 | -8.615850e-47 |
| Msa0437790 | Msa1441610 | 0.820960 | 5.204502e-53 | -8.615850e-47 |
| Msa0456450 | Msa1441610 | 0.807874 | 4.083078e-50 | -8.615850e-47 |
| Msa0457070 | Msa1441610 | 0.837788 | 4.227023e-57 | -8.615850e-47 |
| Msa0467170 | Msa1441610 | -0.842464 | 2.545858e-58 | -8.615850e-47 |
| Msa0467330 | Msa1441610 | -0.842176 | 3.033768e-58 | -8.615850e-47 |
| Msa0469770 | Msa1441610 | 0.809399 | 1.929381e-50 | -8.615850e-47 |
| Msa0474660 | Msa1441610 | 0.806299 | 8.798657e-50 | -8.615850e-47 |
| Msa0479890 | Msa1441610 | 0.819297 | 1.250584e-52 | -8.615850e-47 |
| Msa0998660 | Msa1441610 | 0.812682 | 3.748997e-51 | -8.615850e-47 |
| Msa1002550 | Msa1441610 | 0.816628 | 5.013553e-52 | -8.615850e-47 |
| Msa1019040 | Msa1441610 | 0.802575 | 5.257792e-49 | -8.615850e-47 |
| Msa1033450 | Msa1441610 | 0.831743 | 1.404139e-55 | -8.615850e-47 |
| Msa1058550 | Msa1441610 | 0.804670 | 1.932441e-49 | -8.615850e-47 |
| Msa1070630 | Msa1441610 | 0.800134 | 1.661881e-48 | -8.615850e-47 |
| Msa1078760 | Msa1441610 | 0.801857 | 7.386641e-49 | -8.615850e-47 |
| Msa1106730 | Msa1441610 | 0.813570 | 2.393918e-51 | -8.615850e-47 |
| Msa0238960 | Msa1441610 | 0.804671 | 1.931632e-49 | -8.615850e-47 |
| Msa0266140 | Msa1441610 | 0.801870 | 7.342777e-49 | -8.615850e-47 |
| Msa0267450 | Msa1441610 | 0.848369 | 6.404746e-60 | -8.615850e-47 |
| Msa0267510 | Msa1441610 | 0.848631 | 5.419772e-60 | -8.615850e-47 |
| Msa0269370 | Msa1441610 | 0.808176 | 3.521396e-50 | -8.615850e-47 |
| Msa0274570 | Msa1441610 | -0.804310 | 2.296912e-49 | -8.615850e-47 |
| Msa0279810 | Msa1441610 | -0.806974 | 6.338179e-50 | -8.615850e-47 |
| Msa0292060 | Msa1441610 | 0.806615 | 7.546509e-50 | -8.615850e-47 |
| Msa0300130 | Msa1441610 | 0.810073 | 1.381507e-50 | -8.615850e-47 |
| Msa0302200 | Msa1441610 | -0.805101 | 1.570114e-49 | -8.615850e-47 |
| Msa0304060 | Msa1441610 | 0.800896 | 1.162138e-48 | -8.615850e-47 |
| Msa0306160 | Msa1441610 | 0.802301 | 5.988057e-49 | -8.615850e-47 |
| Msa0319220 | Msa1441610 | -0.805616 | 1.224793e-49 | -8.615850e-47 |
| Msa0326170 | Msa1441610 | 0.801550 | 8.540880e-49 | -8.615850e-47 |
| Msa0337300 | Msa1441610 | 0.821926 | 3.114023e-53 | -8.615850e-47 |
| Msa0339530 | Msa1441610 | -0.810576 | 1.076343e-50 | -8.615850e-47 |
| Msa0364030 | Msa1441610 | 0.800429 | 1.447184e-48 | -8.615850e-47 |
| Msa1118770 | Msa1441610 | 0.822958 | 1.792647e-53 | -8.615850e-47 |
| Msa1130150 | Msa1441610 | 0.809947 | 1.471018e-50 | -8.615850e-47 |
| Msa1132880 | Msa1441610 | 0.808371 | 3.200439e-50 | -8.615850e-47 |
| Msa1156100 | Msa1441610 | 0.806394 | 8.403486e-50 | -8.615850e-47 |
| Msa1191530 | Msa1441610 | 0.810084 | 1.374528e-50 | -8.615850e-47 |
| Msa1205270 | Msa1441610 | 0.800744 | 1.248446e-48 | -8.615850e-47 |
| Msa1209990 | Msa1441610 | 0.804009 | 2.652902e-49 | -8.615850e-47 |
| Msa1215540 | Msa1441610 | 0.817035 | 4.063182e-52 | -8.615850e-47 |
| Msa1219060 | Msa1441610 | 0.810949 | 8.936328e-51 | -8.615850e-47 |
| Msa1222400 | Msa1441610 | -0.802090 | 6.615527e-49 | -8.615850e-47 |
| Msa1223540 | Msa1441610 | -0.801040 | 1.086358e-48 | -8.615850e-47 |
| Msa0484590 | Msa1441610 | 0.811394 | 7.157358e-51 | -8.615850e-47 |
| Msa0519070 | Msa1441610 | 0.800278 | 1.553598e-48 | -8.615850e-47 |
| Msa0519090 | Msa1441610 | 0.805912 | 1.061736e-49 | -8.615850e-47 |
| Msa0523600 | Msa1441610 | 0.818514 | 1.884172e-52 | -8.615850e-47 |
| Msa0525180 | Msa1441610 | 0.848214 | 7.068470e-60 | -8.615850e-47 |
| Msa0548260 | Msa1441610 | 0.809167 | 2.163007e-50 | -8.615850e-47 |
| Msa0555280 | Msa1441610 | -0.809325 | 2.001279e-50 | -8.615850e-47 |
| Msa0568460 | Msa1441610 | 0.817292 | 3.557123e-52 | -8.615850e-47 |
| Msa0579070 | Msa1441610 | 0.832448 | 9.398343e-56 | -8.615850e-47 |
| Msa0580410 | Msa1441610 | 0.807992 | 3.854543e-50 | -8.615850e-47 |
| Msa0580890 | Msa1441610 | 0.804059 | 2.590873e-49 | -8.615850e-47 |
| Msa0582270 | Msa1441610 | 0.805369 | 1.380206e-49 | -8.615850e-47 |
| Msa0598470 | Msa1441610 | 0.811072 | 8.405831e-51 | -8.615850e-47 |
| Msa0853200 | Msa1441610 | 0.830449 | 2.917948e-55 | -8.615850e-47 |
| Msa0865420 | Msa1441610 | -0.803514 | 3.361782e-49 | -8.615850e-47 |
| Msa0882480 | Msa1441610 | 0.805651 | 1.204517e-49 | -8.615850e-47 |
| Msa0928060 | Msa1441610 | 0.812583 | 3.941665e-51 | -8.615850e-47 |
| Msa0945030 | Msa1441610 | -0.820143 | 8.014282e-53 | -8.615850e-47 |
| Msa0964400 | Msa1441610 | 0.826318 | 2.896737e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1441610 | MtrunA17_Chr1g0202351 | 88.921 | 343 | 9 | 2 | 1 | 343 | 1 | 314 | 0.0 | 597 |
| Msa1441610 | MtrunA17_Chr8g0387651 | 61.371 | 321 | 111 | 4 | 31 | 343 | 29 | 344 | 8.88e-139 | 397 |
| Msa1441610 | MtrunA17_Chr8g0361751 | 28.033 | 239 | 160 | 4 | 110 | 339 | 85 | 320 | 3.43e-19 | 87.0 |
| Msa1441610 | MtrunA17_Chr4g0021461 | 34.021 | 97 | 64 | 0 | 239 | 335 | 189 | 285 | 8.34e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1441610 | AT5G60750.1 | 58.876 | 338 | 124 | 7 | 15 | 343 | 16 | 347 | 1.22e-133 | 385 |
| Msa1441610 | AT1G14270.1 | 25.595 | 336 | 203 | 8 | 16 | 341 | 38 | 336 | 5.37e-21 | 92.8 |
| Msa1441610 | AT1G14270.2 | 28.194 | 227 | 149 | 5 | 123 | 339 | 6 | 228 | 1.28e-17 | 81.6 |
| Msa1441610 | AT1G14270.4 | 28.095 | 210 | 140 | 4 | 137 | 339 | 3 | 208 | 1.77e-17 | 80.9 |
| Msa1441610 | AT1G14270.3 | 28.095 | 210 | 140 | 4 | 137 | 339 | 3 | 208 | 1.77e-17 | 80.9 |
| Msa1441610 | AT2G20725.1 | 38.462 | 143 | 71 | 5 | 203 | 339 | 168 | 299 | 9.10e-15 | 74.3 |
Find 109 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCATTGGGTCTGTGGATTT+TGG | 0.168634 | tig0029332:-10922 | Msa1441610:five_prime_UTR |
| ACAATTCTTCCTCTTCTTCT+AGG | 0.182767 | tig0029332:-10749 | Msa1441610:CDS |
| GAAGAACAGGCCACAAATTT+AGG | 0.188245 | tig0029332:+7130 | None:intergenic |
| CAAGATTCAGTCAAGTTTAA+AGG | 0.193284 | tig0029332:-10279 | Msa1441610:CDS |
| TCCTCTGGATTTGCTCGTTT+TGG | 0.260324 | tig0029332:-7419 | Msa1441610:CDS |
| ATGCTGCCACTTGTATTTCT+TGG | 0.277723 | tig0029332:-6883 | Msa1441610:CDS |
| TGCCGTCCAAGGAACTTTCC+AGG | 0.319791 | tig0029332:+8086 | None:intergenic |
| AACACAATCTCCTCCCATAT+CGG | 0.322150 | tig0029332:+7009 | None:intergenic |
| TTTCAGTTTGTGCCCCGATA+TGG | 0.340536 | tig0029332:-7023 | Msa1441610:CDS |
| TGGCAGTTTGATGTCGGTTT+GGG | 0.387411 | tig0029332:-7195 | Msa1441610:CDS |
| GTGGCAGTTTGATGTCGGTT+TGG | 0.390131 | tig0029332:-7196 | Msa1441610:CDS |
| GAGGAAGAATTGTGACGGAT+TGG | 0.393113 | tig0029332:+10759 | None:intergenic |
| GACGGCAAAGACCATTGTTC+AGG | 0.397126 | tig0029332:-8070 | Msa1441610:intron |
| AAACTATGCAACAACATTGA+TGG | 0.398683 | tig0029332:+6817 | None:intergenic |
| TTCAGTTTGTGCCCCGATAT+GGG | 0.398725 | tig0029332:-7022 | Msa1441610:CDS |
| TCTACACTCGAGACCGTAAC+TGG | 0.401617 | tig0029332:+7099 | None:intergenic |
| CAATTCTTCCTCTTCTTCTA+GGG | 0.404564 | tig0029332:-10748 | Msa1441610:CDS |
| GCATAGAGGGCCATTGCCAC+AGG | 0.414426 | tig0029332:+7054 | None:intergenic |
| TGACGGATTGGGAGAGAGAA+GGG | 0.417755 | tig0029332:+10771 | None:intergenic |
| ACACAATCTCCTCCCATATC+GGG | 0.418223 | tig0029332:+7010 | None:intergenic |
| AGGAAGAATTGTGACGGATT+GGG | 0.420903 | tig0029332:+10760 | None:intergenic |
| TTCTGCAGGTTATGCTCCTC+TGG | 0.428634 | tig0029332:-7434 | Msa1441610:intron |
| GGAAAGCGAGAAGAGGTAGT+TGG | 0.435020 | tig0029332:+10711 | None:intergenic |
| TGTATTTCTTGGCATGGTGA+TGG | 0.438892 | tig0029332:-6872 | Msa1441610:CDS |
| CAATGTTGTTGCATAGTTTG+TGG | 0.440983 | tig0029332:-6813 | Msa1441610:CDS |
| GTGGACATGGCTGTAGATAT+TGG | 0.442515 | tig0029332:+10816 | None:intergenic |
| CACCAAAACTAAAACCTTCA+CGG | 0.445721 | tig0029332:+10848 | None:intergenic |
| TGGGAGGAGATTGTGTTTCG+TGG | 0.447082 | tig0029332:-7003 | Msa1441610:CDS |
| TTCTGATGCGTACTACTGTA+AGG | 0.452621 | tig0029332:-10894 | Msa1441610:five_prime_UTR |
| CACAAATGAACCTAAATTTG+TGG | 0.454909 | tig0029332:-7140 | Msa1441610:CDS |
| GCCACTTGTATTTCTTGGCA+TGG | 0.459834 | tig0029332:-6878 | Msa1441610:CDS |
| ACTGGAGCATATTGAAGAAC+AGG | 0.460801 | tig0029332:+7117 | None:intergenic |
| TTGAACCCTGGAAAGTTCCT+TGG | 0.472723 | tig0029332:-8092 | Msa1441610:CDS |
| CTGAAACTACCACCGCATAG+AGG | 0.472948 | tig0029332:+7040 | None:intergenic |
| TGCTATCCCAACCATACCTT+CGG | 0.475440 | tig0029332:+7290 | None:intergenic |
| GGTTCAAATTTGAACTCAAA+GGG | 0.479194 | tig0029332:-7221 | Msa1441610:CDS |
| TCTTCAATATGCTCCAGTTA+CGG | 0.480251 | tig0029332:-7112 | Msa1441610:CDS |
| GTATTTCTTGGCATGGTGAT+GGG | 0.481543 | tig0029332:-6871 | Msa1441610:CDS |
| GCAACAACATTGATGGTAAG+AGG | 0.485919 | tig0029332:+6824 | None:intergenic |
| AAGTGAAACCCTAGAAGAAG+AGG | 0.492947 | tig0029332:+10740 | None:intergenic |
| TAAGACATCATCCTTAGCAT+TGG | 0.493593 | tig0029332:-10937 | Msa1441610:five_prime_UTR |
| GGCATGTACCTGGTTAAAGA+TGG | 0.496242 | tig0029332:+6970 | None:intergenic |
| TCAGAGTCATTACTTTCTGA+TGG | 0.496461 | tig0029332:+10324 | None:intergenic |
| CATCCTTAGCATTGGGTCTG+TGG | 0.497796 | tig0029332:-10929 | Msa1441610:five_prime_UTR |
| AAGACATCATCCTTAGCATT+GGG | 0.499969 | tig0029332:-10936 | Msa1441610:five_prime_UTR |
| TCCTTCTCCCATCTTTAACC+AGG | 0.506033 | tig0029332:-6978 | Msa1441610:CDS |
| GCCGTCCAAGGAACTTTCCA+GGG | 0.511591 | tig0029332:+8087 | None:intergenic |
| TAGTAGATAAGGTGAATGAT+TGG | 0.516213 | tig0029332:+10685 | None:intergenic |
| TGGTTCAAATTTGAACTCAA+AGG | 0.516255 | tig0029332:-7222 | Msa1441610:CDS |
| TACTTCATCGCTGTCTTGCA+AGG | 0.516888 | tig0029332:-7266 | Msa1441610:CDS |
| TTAAACCACTCTCGTCTGAC+TGG | 0.517108 | tig0029332:-7242 | Msa1441610:CDS |
| AGCACGAGACCCTGTGGCAA+TGG | 0.519544 | tig0029332:-7064 | Msa1441610:CDS |
| ATTGAATCCGTTGCTGAGGA+AGG | 0.519653 | tig0029332:-10995 | Msa1441610:five_prime_UTR |
| TCAAGAGACTGTACAATGCT+TGG | 0.524335 | tig0029332:+7322 | None:intergenic |
| GTTACGTACGTTAGTAGATA+AGG | 0.529226 | tig0029332:+10674 | None:intergenic |
| GTGACGGATTGGGAGAGAGA+AGG | 0.533622 | tig0029332:+10770 | None:intergenic |
| TGAAGAAGAAATTGTGGTGG+TGG | 0.537612 | tig0029332:+10797 | None:intergenic |
| GACAGATGTTGCCGAAGGTA+TGG | 0.538716 | tig0029332:-7301 | Msa1441610:CDS |
| TCTTACCCCTTCCTCAGCAA+CGG | 0.539816 | tig0029332:+10988 | None:intergenic |
| GTGCTGTATTTGTACGGTCT+AGG | 0.541725 | tig0029332:-6849 | Msa1441610:CDS |
| ATGTTGCCGAAGGTATGGTT+GGG | 0.545851 | tig0029332:-7296 | Msa1441610:CDS |
| TTGAATCCGTTGCTGAGGAA+GGG | 0.546362 | tig0029332:-10994 | Msa1441610:five_prime_UTR |
| AATTTGAACTCAAAGGGAAG+TGG | 0.548895 | tig0029332:-7215 | Msa1441610:CDS |
| GATGTTGCCGAAGGTATGGT+TGG | 0.549484 | tig0029332:-7297 | Msa1441610:CDS |
| ACAATGGTCTTTGCCGTCCA+AGG | 0.552030 | tig0029332:+8075 | None:intergenic |
| CACAGGGTCTCGTGCTACAA+TGG | 0.554021 | tig0029332:+7071 | None:intergenic |
| TGAATCCGTTGCTGAGGAAG+GGG | 0.558236 | tig0029332:-10993 | Msa1441610:five_prime_UTR |
| TTGGAGTGGAAAGCGAGAAG+AGG | 0.569871 | tig0029332:+10704 | None:intergenic |
| GGGAAGTGGCAGTTTGATGT+CGG | 0.575002 | tig0029332:-7201 | Msa1441610:CDS |
| GACGGATTGGGAGAGAGAAG+GGG | 0.578846 | tig0029332:+10772 | None:intergenic |
| TGAAACTACCACCGCATAGA+GGG | 0.578885 | tig0029332:+7041 | None:intergenic |
| AGAAATTGTGGTGGTGGACA+TGG | 0.580662 | tig0029332:+10803 | None:intergenic |
| ACTCCACACAGGCATGTACC+TGG | 0.581740 | tig0029332:+6960 | None:intergenic |
| CCAGGGTTCAACACTAAGAA+CGG | 0.585045 | tig0029332:+8104 | None:intergenic |
| GCATGTACCTGGTTAAAGAT+GGG | 0.588115 | tig0029332:+6971 | None:intergenic |
| ACCTGGTTAAAGATGGGAGA+AGG | 0.590179 | tig0029332:+6977 | None:intergenic |
| GGGTAAGAGAAATGATTGAA+AGG | 0.592248 | tig0029332:-10973 | Msa1441610:five_prime_UTR |
| CAATCAATCTCAGTCCGTGA+AGG | 0.596261 | tig0029332:-10862 | Msa1441610:five_prime_UTR |
| GGGGAGTGAAGAAGAAATTG+TGG | 0.598782 | tig0029332:+10791 | None:intergenic |
| CCGTTCTTAGTGTTGAACCC+TGG | 0.599304 | tig0029332:-8104 | Msa1441610:CDS |
| TTGTGACAGATGATTGATGA+GGG | 0.604076 | tig0029332:+7158 | None:intergenic |
| CTGAATGTTAAAATGTGCGA+AGG | 0.606735 | tig0029332:+6909 | None:intergenic |
| TTGAACCAGTCAGACGAGAG+TGG | 0.614440 | tig0029332:+7237 | None:intergenic |
| GAATATTGAATCCGTTGCTG+AGG | 0.614984 | tig0029332:-10999 | Msa1441610:five_prime_UTR |
| TGATGGGTGCTGTATTTGTA+CGG | 0.616024 | tig0029332:-6855 | Msa1441610:CDS |
| AATCCACAGACCCAATGCTA+AGG | 0.618458 | tig0029332:+10926 | None:intergenic |
| ACCCTGGAAAGTTCCTTGGA+CGG | 0.618545 | tig0029332:-8088 | Msa1441610:CDS |
| TTGGCTTACTGCTCTTTACA+CGG | 0.621284 | tig0029332:-10226 | Msa1441610:intron |
| CATAGAGGGCCATTGCCACA+GGG | 0.622003 | tig0029332:+7055 | None:intergenic |
| CTCTTGACAGATGTTGCCGA+AGG | 0.624925 | tig0029332:-7306 | Msa1441610:CDS |
| TCTGATGCGTACTACTGTAA+GGG | 0.625138 | tig0029332:-10893 | Msa1441610:five_prime_UTR |
| TACAGTAGTACGCATCAGAA+CGG | 0.627529 | tig0029332:+10897 | None:intergenic |
| AAGAAGAGGAAGAATTGTGA+CGG | 0.629874 | tig0029332:+10754 | None:intergenic |
| GATAAGGTGAATGATTGGAG+TGG | 0.635242 | tig0029332:+10690 | None:intergenic |
| CACAATCTCCTCCCATATCG+GGG | 0.637448 | tig0029332:+7011 | None:intergenic |
| AAAGAAACACTTTCATACAG+AGG | 0.645850 | tig0029332:-7345 | Msa1441610:CDS |
| GTGACAGATGATTGATGAGG+GGG | 0.646113 | tig0029332:+7160 | None:intergenic |
| GATACACTTTACCTGAACAA+TGG | 0.646902 | tig0029332:+8059 | None:intergenic |
| ACTAATACTGCACTCCACAC+AGG | 0.658063 | tig0029332:+6949 | None:intergenic |
| AGTTTGTGCCCCGATATGGG+AGG | 0.660955 | tig0029332:-7019 | Msa1441610:CDS |
| ACCATGCCAAGAAATACAAG+TGG | 0.664668 | tig0029332:+6877 | None:intergenic |
| TTTGTGACAGATGATTGATG+AGG | 0.665764 | tig0029332:+7157 | None:intergenic |
| GGCAATGGCCCTCTATGCGG+TGG | 0.674602 | tig0029332:-7049 | Msa1441610:CDS |
| TGTGGCAATGGCCCTCTATG+CGG | 0.679210 | tig0029332:-7052 | Msa1441610:CDS |
| TAACCAGGTACATGCCTGTG+TGG | 0.679736 | tig0029332:-6963 | Msa1441610:CDS |
| ACCAAAACGAGCAAATCCAG+AGG | 0.683578 | tig0029332:+7418 | None:intergenic |
| CATTGTAGCACGAGACCCTG+TGG | 0.699488 | tig0029332:-7070 | Msa1441610:CDS |
| GAGTGAAGAAGAAATTGTGG+TGG | 0.705156 | tig0029332:+10794 | None:intergenic |
| TGTGACAGATGATTGATGAG+GGG | 0.717590 | tig0029332:+7159 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTTTTTTGCT+GGG | + | tig0029332:7204-7223 | None:intergenic | 10.0% |
| !!! | TATTTTTTTTTTTTTTTTGC+TGG | + | tig0029332:7205-7224 | None:intergenic | 10.0% |
| !!! | TTTTATTTATTATTTGGTTT+TGG | - | tig0029332:7230-7249 | Msa1441610:CDS | 10.0% |
| !! | TAGAATAATGAAAATGAATT+TGG | + | tig0029332:9162-9181 | None:intergenic | 15.0% |
| !! | TAGAAGAGTTAAATAAAAAT+GGG | - | tig0029332:9318-9337 | Msa1441610:intron | 15.0% |
| !!! | TTTTTGTTTTTAAATTCAAG+TGG | - | tig0029332:10164-10183 | Msa1441610:intron | 15.0% |
| !! | TGTTTAGAGATTTAATTGAA+TGG | - | tig0029332:7266-7285 | Msa1441610:CDS | 20.0% |
| !!! | TTTTTGATTTGAACTAATCT+TGG | - | tig0029332:7371-7390 | Msa1441610:CDS | 20.0% |
| !! | TTCATGGATATTATAATAGT+TGG | - | tig0029332:7600-7619 | Msa1441610:intron | 20.0% |
| !!! | AATAGTTGGTATAATAAACT+AGG | - | tig0029332:7614-7633 | Msa1441610:intron | 20.0% |
| !! | CAATTCTTAAGATTGTATTA+TGG | + | tig0029332:8125-8144 | None:intergenic | 20.0% |
| !!! | AATCTTCCAAATATTTTCAT+CGG | + | tig0029332:8188-8207 | None:intergenic | 20.0% |
| !!! | ATATTTTCTTTGACATATTG+TGG | - | tig0029332:8231-8250 | Msa1441610:intron | 20.0% |
| !! | ACATTACAAGATGTATAAAA+TGG | + | tig0029332:8417-8436 | None:intergenic | 20.0% |
| !!! | AGTTAAACTAAGTTTTTGTT+AGG | - | tig0029332:8573-8592 | Msa1441610:intron | 20.0% |
| !!! | TAAGTTTTTGTTAGGATATA+GGG | - | tig0029332:8581-8600 | Msa1441610:intron | 20.0% |
| !! | AATCTGAAAATTGAAAATAC+AGG | + | tig0029332:8846-8865 | None:intergenic | 20.0% |
| !!! | TTTTCAACTGTATAGATAAT+TGG | - | tig0029332:9112-9131 | Msa1441610:intron | 20.0% |
| !! | CTAGAAGAGTTAAATAAAAA+TGG | - | tig0029332:9317-9336 | Msa1441610:intron | 20.0% |
| !! | AGAAGAGTTAAATAAAAATG+GGG | - | tig0029332:9319-9338 | Msa1441610:intron | 20.0% |
| !!! | GATAAACTCTAGAATTTATA+TGG | - | tig0029332:9379-9398 | Msa1441610:intron | 20.0% |
| !! | TATAATAAAACCAAATCTCA+AGG | - | tig0029332:9420-9439 | Msa1441610:intron | 20.0% |
| !!! | GCAATTTTTATTATTGAAAC+TGG | + | tig0029332:10039-10058 | None:intergenic | 20.0% |
| !! | AAAAAATATATGTTTGTGCA+TGG | + | tig0029332:10282-10301 | None:intergenic | 20.0% |
| ! | AAAAGCAAACTTGAAGAAAT+GGG | + | tig0029332:7169-7188 | None:intergenic | 25.0% |
| ! | AAAAAGCAAACTTGAAGAAA+TGG | + | tig0029332:7170-7189 | None:intergenic | 25.0% |
| ! | TTAGAGATTTAATTGAATGG+TGG | - | tig0029332:7269-7288 | Msa1441610:CDS | 25.0% |
| ! | TAGAGATTTAATTGAATGGT+GGG | - | tig0029332:7270-7289 | Msa1441610:CDS | 25.0% |
| !!! | TCTTTTTTCTTCAAGTCTTT+CGG | + | tig0029332:7530-7549 | None:intergenic | 25.0% |
| ! | AAGACTTGAAGAAAAAAGAT+TGG | - | tig0029332:7531-7550 | Msa1441610:intron | 25.0% |
| ! | TTATGTATACTCATGTTTCA+TGG | - | tig0029332:7584-7603 | Msa1441610:intron | 25.0% |
| !!! | TATATGGCTTTTGCTTTAAA+GGG | - | tig0029332:7664-7683 | Msa1441610:intron | 25.0% |
| !!! | GTAATTACTTTTGTGATCAT+TGG | - | tig0029332:7742-7761 | Msa1441610:intron | 25.0% |
| !! | CTAAGTTTTTGTTAGGATAT+AGG | - | tig0029332:8580-8599 | Msa1441610:intron | 25.0% |
| ! | AACATGATTTCATAGAAAGA+GGG | + | tig0029332:9039-9058 | None:intergenic | 25.0% |
| ! | TAACATGATTTCATAGAAAG+AGG | + | tig0029332:9040-9059 | None:intergenic | 25.0% |
| ! | AACTGTATAGATAATTGGTA+TGG | - | tig0029332:9117-9136 | Msa1441610:intron | 25.0% |
| !!! | TTCATTATTCTAGTTTCAAC+TGG | - | tig0029332:9170-9189 | Msa1441610:intron | 25.0% |
| ! | CAAAGTTTGTAGTTTAACAA+TGG | - | tig0029332:9585-9604 | Msa1441610:intron | 25.0% |
| ! | TAAGAACGGTATTTATAATC+TGG | + | tig0029332:9661-9680 | None:intergenic | 25.0% |
| ! | GATATACAAAGTGATAAGAA+AGG | + | tig0029332:9742-9761 | None:intergenic | 25.0% |
| ! | ATTTATATGAAACATAGGAG+TGG | + | tig0029332:9846-9865 | None:intergenic | 25.0% |
| ! | TGGACATTTATATGAAACAT+AGG | + | tig0029332:9851-9870 | None:intergenic | 25.0% |
| ! | GAAAAGTTGTATAATCATCT+CGG | + | tig0029332:9923-9942 | None:intergenic | 25.0% |
| ! | GATTTACCAGAAAGAAAATA+GGG | + | tig0029332:9945-9964 | None:intergenic | 25.0% |
| ! | CTTAGACAAATAATGATTTG+TGG | - | tig0029332:9992-10011 | Msa1441610:intron | 25.0% |
| !!! | TTTTAGTAGTTGATTTGACA+AGG | - | tig0029332:10221-10240 | Msa1441610:intron | 25.0% |
| !!! | TTTAGTAGTTGATTTGACAA+GGG | - | tig0029332:10222-10241 | Msa1441610:intron | 25.0% |
| ! | TTTAATGAAATCACGATGTT+AGG | - | tig0029332:10302-10321 | Msa1441610:CDS | 25.0% |
| TAGTAGATAAGGTGAATGAT+TGG | + | tig0029332:7094-7113 | None:intergenic | 30.0% | |
| ATGTGTAAGAAAAGGAGAAA+GGG | + | tig0029332:7137-7156 | None:intergenic | 30.0% | |
| TATGTGTAAGAAAAGGAGAA+AGG | + | tig0029332:7138-7157 | None:intergenic | 30.0% | |
| TGGCAAATATGTGTAAGAAA+AGG | + | tig0029332:7145-7164 | None:intergenic | 30.0% | |
| !!! | TCGTTTTTTCATTCCAGAAA+TGG | - | tig0029332:7399-7418 | Msa1441610:CDS | 30.0% |
| CAAGATTCAGTCAAGTTTAA+AGG | - | tig0029332:7497-7516 | Msa1441610:intron | 30.0% | |
| TTGCTATGTCTCTTAGTATA+TGG | - | tig0029332:7648-7667 | Msa1441610:intron | 30.0% | |
| ! | GTATATGGCTTTTGCTTTAA+AGG | - | tig0029332:7663-7682 | Msa1441610:intron | 30.0% |
| !!! | ATATGGCTTTTGCTTTAAAG+GGG | - | tig0029332:7665-7684 | Msa1441610:intron | 30.0% |
| TTACTATGACATGACTTAGT+GGG | - | tig0029332:7710-7729 | Msa1441610:intron | 30.0% | |
| !! | TTACTTTTGTGATCATTGGT+TGG | - | tig0029332:7746-7765 | Msa1441610:intron | 30.0% |
| ATTGGGTGCTTATTCAATAT+CGG | - | tig0029332:7773-7792 | Msa1441610:intron | 30.0% | |
| AATGAGTGATGTGTAAATGT+AGG | - | tig0029332:7812-7831 | Msa1441610:intron | 30.0% | |
| GTCATTGCTTATACAAACTT+TGG | + | tig0029332:8065-8084 | None:intergenic | 30.0% | |
| ATGTGTCCGATGAAAATATT+TGG | - | tig0029332:8179-8198 | Msa1441610:intron | 30.0% | |
| !!! | AAGCATTTTTTCCATCAGAA+TGG | + | tig0029332:8279-8298 | None:intergenic | 30.0% |
| TTATTGCAATATGTGTAGCA+AGG | - | tig0029332:8305-8324 | Msa1441610:intron | 30.0% | |
| AGATGTATAAAATGGTGATC+CGG | + | tig0029332:8409-8428 | None:intergenic | 30.0% | |
| ATCCATTGCTAATATGGAAA+GGG | + | tig0029332:8520-8539 | None:intergenic | 30.0% | |
| AATCCATTGCTAATATGGAA+AGG | + | tig0029332:8521-8540 | None:intergenic | 30.0% | |
| TTTCCATATTAGCAATGGAT+TGG | - | tig0029332:8520-8539 | Msa1441610:intron | 30.0% | |
| ! | ACTTAGTTTAACTTTAACCG+TGG | + | tig0029332:8566-8585 | None:intergenic | 30.0% |
| AGTTAAGTAGTTAAACTCAG+AGG | - | tig0029332:8606-8625 | Msa1441610:intron | 30.0% | |
| GTTAAGTAGTTAAACTCAGA+GGG | - | tig0029332:8607-8626 | Msa1441610:intron | 30.0% | |
| AATCAAATTTGTCAGTCTAG+AGG | - | tig0029332:8745-8764 | Msa1441610:intron | 30.0% | |
| ! | ATTTTCAGATTGAAACCTTC+AGG | - | tig0029332:8855-8874 | Msa1441610:intron | 30.0% |
| ATTGAAACCTTCAGGATAAT+AGG | - | tig0029332:8863-8882 | Msa1441610:intron | 30.0% | |
| TTGAAACCTTCAGGATAATA+GGG | - | tig0029332:8864-8883 | Msa1441610:intron | 30.0% | |
| AGGGAATGCTTTGTATAAAT+AGG | - | tig0029332:8903-8922 | Msa1441610:intron | 30.0% | |
| TCAATTTCCAATTCTTTGTC+TGG | - | tig0029332:9078-9097 | Msa1441610:intron | 30.0% | |
| CAATTTCCAATTCTTTGTCT+GGG | - | tig0029332:9079-9098 | Msa1441610:intron | 30.0% | |
| ATATTTAGGTCCTTGAGATT+TGG | + | tig0029332:9433-9452 | None:intergenic | 30.0% | |
| AATCTCAAGGACCTAAATAT+TGG | - | tig0029332:9433-9452 | Msa1441610:intron | 30.0% | |
| ! | GAAACATATTTAGAGTGTGT+CGG | - | tig0029332:9607-9626 | Msa1441610:intron | 30.0% |
| ! | AAACATATTTAGAGTGTGTC+GGG | - | tig0029332:9608-9627 | Msa1441610:intron | 30.0% |
| ATCTATGCTTCAAGTATGTT+CGG | - | tig0029332:9774-9793 | Msa1441610:intron | 30.0% | |
| ! | ACTTTTCCCTATTTTCTTTC+TGG | - | tig0029332:9936-9955 | Msa1441610:intron | 30.0% |
| CGATTTACCAGAAAGAAAAT+AGG | + | tig0029332:9946-9965 | None:intergenic | 30.0% | |
| AAAGAAACACTTTCATACAG+AGG | - | tig0029332:10431-10450 | Msa1441610:intron | 30.0% | |
| TGGTTCAAATTTGAACTCAA+AGG | - | tig0029332:10554-10573 | Msa1441610:intron | 30.0% | |
| GGTTCAAATTTGAACTCAAA+GGG | - | tig0029332:10555-10574 | Msa1441610:intron | 30.0% | |
| CACAAATGAACCTAAATTTG+TGG | - | tig0029332:10636-10655 | Msa1441610:intron | 30.0% | |
| AAACTATGCAACAACATTGA+TGG | + | tig0029332:10962-10981 | None:intergenic | 30.0% | |
| GGGTAAGAGAAATGATTGAA+AGG | - | tig0029332:6803-6822 | Msa1441610:CDS | 35.0% | |
| TAAGACATCATCCTTAGCAT+TGG | - | tig0029332:6839-6858 | Msa1441610:CDS | 35.0% | |
| AAGACATCATCCTTAGCATT+GGG | - | tig0029332:6840-6859 | Msa1441610:CDS | 35.0% | |
| CACCAAAACTAAAACCTTCA+CGG | + | tig0029332:6931-6950 | None:intergenic | 35.0% | |
| AAGAAGAGGAAGAATTGTGA+CGG | + | tig0029332:7025-7044 | None:intergenic | 35.0% | |
| ACAATTCTTCCTCTTCTTCT+AGG | - | tig0029332:7027-7046 | Msa1441610:CDS | 35.0% | |
| CAATTCTTCCTCTTCTTCTA+GGG | - | tig0029332:7028-7047 | Msa1441610:CDS | 35.0% | |
| GTTACGTACGTTAGTAGATA+AGG | + | tig0029332:7105-7124 | None:intergenic | 35.0% | |
| AACACAAAACTCTCCATTTC+TGG | + | tig0029332:7415-7434 | None:intergenic | 35.0% | |
| TCAGAGTCATTACTTTCTGA+TGG | + | tig0029332:7455-7474 | None:intergenic | 35.0% | |
| TAACTCTAACCACTATGACA+AGG | + | tig0029332:7693-7712 | None:intergenic | 35.0% | |
| GTTACTATGACATGACTTAG+TGG | - | tig0029332:7709-7728 | Msa1441610:intron | 35.0% | |
| ! | AAAATGGAGCTCCCTTATTT+GGG | + | tig0029332:7851-7870 | None:intergenic | 35.0% |
| !! | ATCTCTAAGAGCATCCAAAA+TGG | + | tig0029332:7867-7886 | None:intergenic | 35.0% |
| ATACAAACTTTGGCACAACA+GGG | + | tig0029332:8055-8074 | None:intergenic | 35.0% | |
| TATACAAACTTTGGCACAAC+AGG | + | tig0029332:8056-8075 | None:intergenic | 35.0% | |
| TTGTATAAGCAATGACTGAG+TGG | - | tig0029332:8069-8088 | Msa1441610:intron | 35.0% | |
| TGTATAAGCAATGACTGAGT+GGG | - | tig0029332:8070-8089 | Msa1441610:intron | 35.0% | |
| TCAGAATGTCAAATAGCTCA+TGG | + | tig0029332:8211-8230 | None:intergenic | 35.0% | |
| GTTATCTTAGTCCATTCTGA+TGG | - | tig0029332:8265-8284 | Msa1441610:intron | 35.0% | |
| AATGGCATGTCAAATTTGTC+TGG | + | tig0029332:8441-8460 | None:intergenic | 35.0% | |
| ! | TGCCATTCTGATTTTATTCC+AGG | - | tig0029332:8454-8473 | Msa1441610:intron | 35.0% |
| ! | GCCATTCTGATTTTATTCCA+GGG | - | tig0029332:8455-8474 | Msa1441610:intron | 35.0% |
| TCCCTGGAATAAAATCAGAA+TGG | + | tig0029332:8459-8478 | None:intergenic | 35.0% | |
| TCCATTGCTAATATGGAAAG+GGG | + | tig0029332:8519-8538 | None:intergenic | 35.0% | |
| GAACCAATCCATTGCTAATA+TGG | + | tig0029332:8526-8545 | None:intergenic | 35.0% | |
| !!! | CTTTCCTAATTTTAGAGCCA+CGG | - | tig0029332:8546-8565 | Msa1441610:intron | 35.0% |
| !! | TTAACCGTGGCTCTAAAATT+AGG | + | tig0029332:8553-8572 | None:intergenic | 35.0% |
| AGACATTGAGTAAATTGAGC+AGG | - | tig0029332:8683-8702 | Msa1441610:intron | 35.0% | |
| GACATTGAGTAAATTGAGCA+GGG | - | tig0029332:8684-8703 | Msa1441610:intron | 35.0% | |
| ACATTGAGTAAATTGAGCAG+GGG | - | tig0029332:8685-8704 | Msa1441610:intron | 35.0% | |
| GGGCATATTATTGCAAATCA+AGG | - | tig0029332:8721-8740 | Msa1441610:intron | 35.0% | |
| ACCTTTACTACTTTCAGACA+CGG | - | tig0029332:8809-8828 | Msa1441610:intron | 35.0% | |
| TGAAACCTTCAGGATAATAG+GGG | - | tig0029332:8865-8884 | Msa1441610:intron | 35.0% | |
| TAGGAGAAATTTGAGTAGAG+AGG | - | tig0029332:8922-8941 | Msa1441610:intron | 35.0% | |
| AGTGACTCTATTGTAGAAGA+GGG | - | tig0029332:8982-9001 | Msa1441610:intron | 35.0% | |
| TTCATAGAAAGAGGGAGAAT+AGG | + | tig0029332:9031-9050 | None:intergenic | 35.0% | |
| TAGATACCCAGACAAAGAAT+TGG | + | tig0029332:9088-9107 | None:intergenic | 35.0% | |
| TCTTCTTTGTTCATTCTCAC+AGG | + | tig0029332:9233-9252 | None:intergenic | 35.0% | |
| GATACACTTTACCTGAACAA+TGG | + | tig0029332:9720-9739 | None:intergenic | 35.0% | |
| CATAGGAGTGGACATTTATA+CGG | + | tig0029332:9834-9853 | None:intergenic | 35.0% | |
| ACATTTATCCCAACAGAAAC+AGG | + | tig0029332:9886-9905 | None:intergenic | 35.0% | |
| ! | TGTTTCTGTTGGGATAAATG+TGG | - | tig0029332:9885-9904 | Msa1441610:intron | 35.0% |
| TATAATCATCTCGGTTGTCA+AGG | + | tig0029332:9914-9933 | None:intergenic | 35.0% | |
| TATATGTTTGTGCATGGAAC+AGG | + | tig0029332:10276-10295 | None:intergenic | 35.0% | |
| TGTTAGGAAGCAAACTAAGT+CGG | - | tig0029332:10318-10337 | Msa1441610:CDS | 35.0% | |
| AATTTGAACTCAAAGGGAAG+TGG | - | tig0029332:10561-10580 | Msa1441610:intron | 35.0% | |
| TTGTGACAGATGATTGATGA+GGG | + | tig0029332:10621-10640 | None:intergenic | 35.0% | |
| TTTGTGACAGATGATTGATG+AGG | + | tig0029332:10622-10641 | None:intergenic | 35.0% | |
| TCTTCAATATGCTCCAGTTA+CGG | - | tig0029332:10664-10683 | Msa1441610:intron | 35.0% | |
| CTGAATGTTAAAATGTGCGA+AGG | + | tig0029332:10870-10889 | None:intergenic | 35.0% | |
| !! | TCGCACATTTTAACATTCAG+AGG | - | tig0029332:10870-10889 | Msa1441610:five_prime_UTR | 35.0% |
| CAATGTTGTTGCATAGTTTG+TGG | - | tig0029332:10963-10982 | Msa1441610:five_prime_UTR | 35.0% | |
| ! | GTGGAATGCTTTTGTATTTC+TGG | - | tig0029332:10982-11001 | Msa1441610:five_prime_UTR | 35.0% |
| GAATATTGAATCCGTTGCTG+AGG | - | tig0029332:6777-6796 | Msa1441610:exon | 40.0% | |
| TACAGTAGTACGCATCAGAA+CGG | + | tig0029332:6882-6901 | None:intergenic | 40.0% | |
| TTCTGATGCGTACTACTGTA+AGG | - | tig0029332:6882-6901 | Msa1441610:CDS | 40.0% | |
| TCTGATGCGTACTACTGTAA+GGG | - | tig0029332:6883-6902 | Msa1441610:CDS | 40.0% | |
| !!! | GTCCGTGAAGGTTTTAGTTT+TGG | - | tig0029332:6926-6945 | Msa1441610:CDS | 40.0% |
| TGAAGAAGAAATTGTGGTGG+TGG | + | tig0029332:6982-7001 | None:intergenic | 40.0% | |
| GAGTGAAGAAGAAATTGTGG+TGG | + | tig0029332:6985-7004 | None:intergenic | 40.0% | |
| !! | AGGAAGAATTGTGACGGATT+GGG | + | tig0029332:7019-7038 | None:intergenic | 40.0% |
| AAGTGAAACCCTAGAAGAAG+AGG | + | tig0029332:7039-7058 | None:intergenic | 40.0% | |
| GATAAGGTGAATGATTGGAG+TGG | + | tig0029332:7089-7108 | None:intergenic | 40.0% | |
| ! | AATGGTGGGATTGATATGTG+AGG | - | tig0029332:7284-7303 | Msa1441610:CDS | 40.0% |
| ATGTGAGGTCAGTTGTTAGT+TGG | - | tig0029332:7299-7318 | Msa1441610:CDS | 40.0% | |
| TTGGCTTACTGCTCTTTACA+CGG | - | tig0029332:7550-7569 | Msa1441610:intron | 40.0% | |
| !! | CTTTTGTGATCATTGGTTGG+AGG | - | tig0029332:7749-7768 | Msa1441610:intron | 40.0% |
| ! | TGATCATTGGTTGGAGGAAT+TGG | - | tig0029332:7755-7774 | Msa1441610:intron | 40.0% |
| ! | GATCATTGGTTGGAGGAATT+GGG | - | tig0029332:7756-7775 | Msa1441610:intron | 40.0% |
| ! | CCTTATTTGGGTGCATAAGT+GGG | + | tig0029332:7839-7858 | None:intergenic | 40.0% |
| CCACTTATGCACCCAAATAA+GGG | - | tig0029332:7837-7856 | Msa1441610:intron | 40.0% | |
| CAAAATGGAGCTCCCTTATT+TGG | + | tig0029332:7852-7871 | None:intergenic | 40.0% | |
| ! | CAAATAAGGGAGCTCCATTT+TGG | - | tig0029332:7850-7869 | Msa1441610:intron | 40.0% |
| AGGAAAGGAACAGACTCAAA+GGG | + | tig0029332:7953-7972 | None:intergenic | 40.0% | |
| TAGGAAAGGAACAGACTCAA+AGG | + | tig0029332:7954-7973 | None:intergenic | 40.0% | |
| GTATAAGCAATGACTGAGTG+GGG | - | tig0029332:8071-8090 | Msa1441610:CDS | 40.0% | |
| TCCCCTTTCCATATTAGCAA+TGG | - | tig0029332:8515-8534 | Msa1441610:intron | 40.0% | |
| !! | CGTGGCTCTAAAATTAGGAA+AGG | + | tig0029332:8548-8567 | None:intergenic | 40.0% |
| AAATTTGTCAGTCTAGAGGC+TGG | - | tig0029332:8749-8768 | Msa1441610:intron | 40.0% | |
| TCCGTGTCTGAAAGTAGTAA+AGG | + | tig0029332:8813-8832 | None:intergenic | 40.0% | |
| CTCTTCTACAATAGAGTCAC+TGG | + | tig0029332:8983-9002 | None:intergenic | 40.0% | |
| CAGTGACTCTATTGTAGAAG+AGG | - | tig0029332:8981-9000 | Msa1441610:intron | 40.0% | |
| ATTGTAGAAGAGGGAACTCT+TGG | - | tig0029332:8991-9010 | Msa1441610:intron | 40.0% | |
| GTGTGGACACACCAATATTT+AGG | + | tig0029332:9447-9466 | None:intergenic | 40.0% | |
| !! | GCAGATTGCTGTTTGATAGT+TGG | + | tig0029332:9542-9561 | None:intergenic | 40.0% |
| TGGACATTTATACGGTGAAG+GGG | + | tig0029332:9826-9845 | None:intergenic | 40.0% | |
| GTGGACATTTATACGGTGAA+GGG | + | tig0029332:9827-9846 | None:intergenic | 40.0% | |
| AGTGGACATTTATACGGTGA+AGG | + | tig0029332:9828-9847 | None:intergenic | 40.0% | |
| GTTAGGAAGCAAACTAAGTC+GGG | - | tig0029332:10319-10338 | Msa1441610:CDS | 40.0% | |
| !!! | ATTTGCTCGTTTTGGTTGGT+AGG | - | tig0029332:10365-10384 | Msa1441610:intron | 40.0% |
| CCTGCTGTGTAAGCTAAAAA+CGG | + | tig0029332:10404-10423 | None:intergenic | 40.0% | |
| !!! | CGTTTTTAGCTTACACAGCA+GGG | - | tig0029332:10402-10421 | Msa1441610:intron | 40.0% |
| TCAAGAGACTGTACAATGCT+TGG | + | tig0029332:10457-10476 | None:intergenic | 40.0% | |
| TGTGACAGATGATTGATGAG+GGG | + | tig0029332:10620-10639 | None:intergenic | 40.0% | |
| GAAGAACAGGCCACAAATTT+AGG | + | tig0029332:10649-10668 | None:intergenic | 40.0% | |
| ACTGGAGCATATTGAAGAAC+AGG | + | tig0029332:10662-10681 | None:intergenic | 40.0% | |
| AACACAATCTCCTCCCATAT+CGG | + | tig0029332:10770-10789 | None:intergenic | 40.0% | |
| GCATGTACCTGGTTAAAGAT+GGG | + | tig0029332:10808-10827 | None:intergenic | 40.0% | |
| ! | ATGCTGCCACTTGTATTTCT+TGG | - | tig0029332:10893-10912 | Msa1441610:five_prime_UTR | 40.0% |
| ACCATGCCAAGAAATACAAG+TGG | + | tig0029332:10902-10921 | None:intergenic | 40.0% | |
| TGTATTTCTTGGCATGGTGA+TGG | - | tig0029332:10904-10923 | Msa1441610:five_prime_UTR | 40.0% | |
| GTATTTCTTGGCATGGTGAT+GGG | - | tig0029332:10905-10924 | Msa1441610:five_prime_UTR | 40.0% | |
| ! | TGATGGGTGCTGTATTTGTA+CGG | - | tig0029332:10921-10940 | Msa1441610:five_prime_UTR | 40.0% |
| ! | GCAACAACATTGATGGTAAG+AGG | + | tig0029332:10955-10974 | None:intergenic | 40.0% |
| ATTGAATCCGTTGCTGAGGA+AGG | - | tig0029332:6781-6800 | Msa1441610:CDS | 45.0% | |
| TTGAATCCGTTGCTGAGGAA+GGG | - | tig0029332:6782-6801 | Msa1441610:CDS | 45.0% | |
| AATCCACAGACCCAATGCTA+AGG | + | tig0029332:6853-6872 | None:intergenic | 45.0% | |
| !! | AGCATTGGGTCTGTGGATTT+TGG | - | tig0029332:6854-6873 | Msa1441610:CDS | 45.0% |
| CAATCAATCTCAGTCCGTGA+AGG | - | tig0029332:6914-6933 | Msa1441610:CDS | 45.0% | |
| GTGGACATGGCTGTAGATAT+TGG | + | tig0029332:6963-6982 | None:intergenic | 45.0% | |
| !! | AGAAATTGTGGTGGTGGACA+TGG | + | tig0029332:6976-6995 | None:intergenic | 45.0% |
| GGGGAGTGAAGAAGAAATTG+TGG | + | tig0029332:6988-7007 | None:intergenic | 45.0% | |
| !! | GAGGAAGAATTGTGACGGAT+TGG | + | tig0029332:7020-7039 | None:intergenic | 45.0% |
| AAAGGAGAAAGGGAGAGAGT+GGG | + | tig0029332:7127-7146 | None:intergenic | 45.0% | |
| AAAAGGAGAAAGGGAGAGAG+TGG | + | tig0029332:7128-7147 | None:intergenic | 45.0% | |
| GCAAACTTGAAGAAATGGGC+TGG | + | tig0029332:7165-7184 | None:intergenic | 45.0% | |
| CCCACTTATGCACCCAAATA+AGG | - | tig0029332:7836-7855 | Msa1441610:intron | 45.0% | |
| ! | CCCTTATTTGGGTGCATAAG+TGG | + | tig0029332:7840-7859 | None:intergenic | 45.0% |
| GCAATGGAAGAGTCTAGGAA+AGG | + | tig0029332:7968-7987 | None:intergenic | 45.0% | |
| TTCCTAGACTCTTCCATTGC+AGG | - | tig0029332:7968-7987 | Msa1441610:intron | 45.0% | |
| ! | CTGATCTAGAACTCCTGCAA+TGG | + | tig0029332:7984-8003 | None:intergenic | 45.0% |
| GTGTAGCAAGGATGTAATCG+TGG | - | tig0029332:8317-8336 | Msa1441610:intron | 45.0% | |
| GAAGAACCTGTAGTTGCGTT+CGG | - | tig0029332:8486-8505 | Msa1441610:intron | 45.0% | |
| AAGAACCTGTAGTTGCGTTC+GGG | - | tig0029332:8487-8506 | Msa1441610:intron | 45.0% | |
| TAGAAGAGGGAACTCTTGGA+GGG | - | tig0029332:8995-9014 | Msa1441610:intron | 45.0% | |
| CCAGGGTTCAACACTAAGAA+CGG | + | tig0029332:9675-9694 | None:intergenic | 45.0% | |
| TTGAACCCTGGAAAGTTCCT+TGG | - | tig0029332:9684-9703 | Msa1441610:intron | 45.0% | |
| ATGTTCGGTACTTCCGATTG+TGG | - | tig0029332:9789-9808 | Msa1441610:intron | 45.0% | |
| GGTAGGAAGGAATCCACAAT+CGG | + | tig0029332:9805-9824 | None:intergenic | 45.0% | |
| CATTTATACGGTGAAGGGGT+AGG | + | tig0029332:9822-9841 | None:intergenic | 45.0% | |
| GAAACAGGAAGAGGCAAGAA+TGG | + | tig0029332:9871-9890 | None:intergenic | 45.0% | |
| !! | TTGCCTCTTCCTGTTTCTGT+TGG | - | tig0029332:9874-9893 | Msa1441610:intron | 45.0% |
| !! | TGCCTCTTCCTGTTTCTGTT+GGG | - | tig0029332:9875-9894 | Msa1441610:intron | 45.0% |
| ATCCCAACAGAAACAGGAAG+AGG | + | tig0029332:9880-9899 | None:intergenic | 45.0% | |
| !! | TCCTCTGGATTTGCTCGTTT+TGG | - | tig0029332:10357-10376 | Msa1441610:CDS | 45.0% |
| ACCAAAACGAGCAAATCCAG+AGG | + | tig0029332:10361-10380 | None:intergenic | 45.0% | |
| !! | CTGGATTTGCTCGTTTTGGT+TGG | - | tig0029332:10361-10380 | Msa1441610:CDS | 45.0% |
| !!! | CGTTTTGGTTGGTAGGTTCT+TGG | - | tig0029332:10372-10391 | Msa1441610:intron | 45.0% |
| !!! | CCGTTTTTAGCTTACACAGC+AGG | - | tig0029332:10401-10420 | Msa1441610:intron | 45.0% |
| ! | ATGTTGCCGAAGGTATGGTT+GGG | - | tig0029332:10480-10499 | Msa1441610:intron | 45.0% |
| TGCTATCCCAACCATACCTT+CGG | + | tig0029332:10489-10508 | None:intergenic | 45.0% | |
| TACTTCATCGCTGTCTTGCA+AGG | - | tig0029332:10510-10529 | Msa1441610:intron | 45.0% | |
| TTAAACCACTCTCGTCTGAC+TGG | - | tig0029332:10534-10553 | Msa1441610:intron | 45.0% | |
| !! | TGGCAGTTTGATGTCGGTTT+GGG | - | tig0029332:10581-10600 | Msa1441610:intron | 45.0% |
| GTGACAGATGATTGATGAGG+GGG | + | tig0029332:10619-10638 | None:intergenic | 45.0% | |
| TGAAACTACCACCGCATAGA+GGG | + | tig0029332:10738-10757 | None:intergenic | 45.0% | |
| TTTCAGTTTGTGCCCCGATA+TGG | - | tig0029332:10753-10772 | Msa1441610:CDS | 45.0% | |
| TTCAGTTTGTGCCCCGATAT+GGG | - | tig0029332:10754-10773 | Msa1441610:CDS | 45.0% | |
| ACACAATCTCCTCCCATATC+GGG | + | tig0029332:10769-10788 | None:intergenic | 45.0% | |
| TCCTTCTCCCATCTTTAACC+AGG | - | tig0029332:10798-10817 | Msa1441610:CDS | 45.0% | |
| ACCTGGTTAAAGATGGGAGA+AGG | + | tig0029332:10802-10821 | None:intergenic | 45.0% | |
| GGCATGTACCTGGTTAAAGA+TGG | + | tig0029332:10809-10828 | None:intergenic | 45.0% | |
| ACTAATACTGCACTCCACAC+AGG | + | tig0029332:10830-10849 | None:intergenic | 45.0% | |
| GCCACTTGTATTTCTTGGCA+TGG | - | tig0029332:10898-10917 | Msa1441610:five_prime_UTR | 45.0% | |
| GTGCTGTATTTGTACGGTCT+AGG | - | tig0029332:10927-10946 | Msa1441610:five_prime_UTR | 45.0% | |
| !!! | ATTGTTTTTTATTTATTATT+TGG | - | tig0029332:7224-7243 | Msa1441610:CDS | 5.0% |
| TGAATCCGTTGCTGAGGAAG+GGG | - | tig0029332:6783-6802 | Msa1441610:CDS | 50.0% | |
| TCTTACCCCTTCCTCAGCAA+CGG | + | tig0029332:6791-6810 | None:intergenic | 50.0% | |
| ! | CATCCTTAGCATTGGGTCTG+TGG | - | tig0029332:6847-6866 | Msa1441610:CDS | 50.0% |
| !! | TGACGGATTGGGAGAGAGAA+GGG | + | tig0029332:7008-7027 | None:intergenic | 50.0% |
| GGAAAGCGAGAAGAGGTAGT+TGG | + | tig0029332:7068-7087 | None:intergenic | 50.0% | |
| TTGGAGTGGAAAGCGAGAAG+AGG | + | tig0029332:7075-7094 | None:intergenic | 50.0% | |
| ! | AAAGGGGAGCCTTGTCATAG+TGG | - | tig0029332:7681-7700 | Msa1441610:intron | 50.0% |
| CTCCTGCAATGGAAGAGTCT+AGG | + | tig0029332:7973-7992 | None:intergenic | 50.0% | |
| TGGCACAACAGGGCAATGTT+TGG | + | tig0029332:8045-8064 | None:intergenic | 50.0% | |
| GTAGACACAGCAGATGGGTA+AGG | + | tig0029332:8387-8406 | None:intergenic | 50.0% | |
| TACCCATCTGCTGTGTCTAC+CGG | - | tig0029332:8387-8406 | Msa1441610:intron | 50.0% | |
| ATCCGGTAGACACAGCAGAT+GGG | + | tig0029332:8392-8411 | None:intergenic | 50.0% | |
| AGGTTCTTCAGATGCTTCCC+TGG | + | tig0029332:8475-8494 | None:intergenic | 50.0% | |
| ATGAACCCGAACGCAACTAC+AGG | + | tig0029332:8495-8514 | None:intergenic | 50.0% | |
| AGCAGGGGTTCTGTTGTAGA+AGG | - | tig0029332:8700-8719 | Msa1441610:intron | 50.0% | |
| GCAGGGGTTCTGTTGTAGAA+GGG | - | tig0029332:8701-8720 | Msa1441610:intron | 50.0% | |
| CACTGCCCCTATTATCCTGA+AGG | + | tig0029332:8873-8892 | None:intergenic | 50.0% | |
| CAGGATAATAGGGGCAGTGA+AGG | - | tig0029332:8874-8893 | Msa1441610:intron | 50.0% | |
| AGGGGCAGTGAAGGAGTTAA+AGG | - | tig0029332:8883-8902 | Msa1441610:intron | 50.0% | |
| GGGGCAGTGAAGGAGTTAAA+GGG | - | tig0029332:8884-8903 | Msa1441610:intron | 50.0% | |
| GTAGAAGAGGGAACTCTTGG+AGG | - | tig0029332:8994-9013 | Msa1441610:intron | 50.0% | |
| AGAAGAGGGAACTCTTGGAG+GGG | - | tig0029332:8996-9015 | Msa1441610:intron | 50.0% | |
| TCAACTGGCAGTCTGATGAG+AGG | - | tig0029332:9185-9204 | Msa1441610:intron | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+TGG | + | tig0029332:9462-9481 | None:intergenic | 50.0% | |
| ! | CCGTTCTTAGTGTTGAACCC+TGG | - | tig0029332:9672-9691 | Msa1441610:intron | 50.0% |
| ACCCTGGAAAGTTCCTTGGA+CGG | - | tig0029332:9688-9707 | Msa1441610:intron | 50.0% | |
| ACAATGGTCTTTGCCGTCCA+AGG | + | tig0029332:9704-9723 | None:intergenic | 50.0% | |
| GACGGCAAAGACCATTGTTC+AGG | - | tig0029332:9706-9725 | Msa1441610:intron | 50.0% | |
| TATACGGTGAAGGGGTAGGA+AGG | + | tig0029332:9818-9837 | None:intergenic | 50.0% | |
| CAAACTAAGTCGGGTTCTGC+AGG | - | tig0029332:10328-10347 | Msa1441610:CDS | 50.0% | |
| TTCTGCAGGTTATGCTCCTC+TGG | - | tig0029332:10342-10361 | Msa1441610:CDS | 50.0% | |
| CTCTTGACAGATGTTGCCGA+AGG | - | tig0029332:10470-10489 | Msa1441610:intron | 50.0% | |
| GACAGATGTTGCCGAAGGTA+TGG | - | tig0029332:10475-10494 | Msa1441610:intron | 50.0% | |
| ! | GATGTTGCCGAAGGTATGGT+TGG | - | tig0029332:10479-10498 | Msa1441610:intron | 50.0% |
| TTGAACCAGTCAGACGAGAG+TGG | + | tig0029332:10542-10561 | None:intergenic | 50.0% | |
| GGGAAGTGGCAGTTTGATGT+CGG | - | tig0029332:10575-10594 | Msa1441610:intron | 50.0% | |
| ! | GTGGCAGTTTGATGTCGGTT+TGG | - | tig0029332:10580-10599 | Msa1441610:intron | 50.0% |
| GATTGATGAGGGGGAACATG+AGG | + | tig0029332:10610-10629 | None:intergenic | 50.0% | |
| TCTACACTCGAGACCGTAAC+TGG | + | tig0029332:10680-10699 | None:intergenic | 50.0% | |
| CTGAAACTACCACCGCATAG+AGG | + | tig0029332:10739-10758 | None:intergenic | 50.0% | |
| CACAATCTCCTCCCATATCG+GGG | + | tig0029332:10768-10787 | None:intergenic | 50.0% | |
| TGGGAGGAGATTGTGTTTCG+TGG | - | tig0029332:10773-10792 | Msa1441610:CDS | 50.0% | |
| TAACCAGGTACATGCCTGTG+TGG | - | tig0029332:10813-10832 | Msa1441610:exon | 50.0% | |
| !! | GACGGATTGGGAGAGAGAAG+GGG | + | tig0029332:7007-7026 | None:intergenic | 55.0% |
| !! | GTGACGGATTGGGAGAGAGA+AGG | + | tig0029332:7009-7028 | None:intergenic | 55.0% |
| GATCCGGTAGACACAGCAGA+TGG | + | tig0029332:8393-8412 | None:intergenic | 55.0% | |
| GAAGAGGGAACTCTTGGAGG+GGG | - | tig0029332:8997-9016 | Msa1441610:intron | 55.0% | |
| AAGAGGGAACTCTTGGAGGG+GGG | - | tig0029332:8998-9017 | Msa1441610:intron | 55.0% | |
| GCCGTCCAAGGAACTTTCCA+GGG | + | tig0029332:9692-9711 | None:intergenic | 55.0% | |
| TGCCGTCCAAGGAACTTTCC+AGG | + | tig0029332:9693-9712 | None:intergenic | 55.0% | |
| CACAGGGTCTCGTGCTACAA+TGG | + | tig0029332:10708-10727 | None:intergenic | 55.0% | |
| CATTGTAGCACGAGACCCTG+TGG | - | tig0029332:10706-10725 | Msa1441610:CDS | 55.0% | |
| CATAGAGGGCCATTGCCACA+GGG | + | tig0029332:10724-10743 | None:intergenic | 55.0% | |
| TGTGGCAATGGCCCTCTATG+CGG | - | tig0029332:10724-10743 | Msa1441610:CDS | 55.0% | |
| AGTTTGTGCCCCGATATGGG+AGG | - | tig0029332:10757-10776 | Msa1441610:CDS | 55.0% | |
| ACTCCACACAGGCATGTACC+TGG | + | tig0029332:10819-10838 | None:intergenic | 55.0% | |
| AGCACGAGACCCTGTGGCAA+TGG | - | tig0029332:10712-10731 | Msa1441610:CDS | 60.0% | |
| GCATAGAGGGCCATTGCCAC+AGG | + | tig0029332:10725-10744 | None:intergenic | 60.0% | |
| GGCAATGGCCCTCTATGCGG+TGG | - | tig0029332:10727-10746 | Msa1441610:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0029332 | gene | 6763 | 11035 | 6763 | ID=Msa1441610;Name=Msa1441610 |
| tig0029332 | mRNA | 6763 | 11035 | 6763 | ID=Msa1441610-mRNA-1;Parent=Msa1441610;Name=Msa1441610-mRNA-1;_AED=0.20;_eAED=0.20;_QI=212|1|1|1|1|1|4|17|343 |
| tig0029332 | exon | 6763 | 7448 | 6763 | ID=Msa1441610-mRNA-1:exon:12968;Parent=Msa1441610-mRNA-1 |
| tig0029332 | exon | 8071 | 8136 | 8071 | ID=Msa1441610-mRNA-1:exon:12967;Parent=Msa1441610-mRNA-1 |
| tig0029332 | exon | 10227 | 10382 | 10227 | ID=Msa1441610-mRNA-1:exon:12966;Parent=Msa1441610-mRNA-1 |
| tig0029332 | exon | 10683 | 11035 | 10683 | ID=Msa1441610-mRNA-1:exon:12965;Parent=Msa1441610-mRNA-1 |
| tig0029332 | five_prime_UTR | 10824 | 11035 | 10824 | ID=Msa1441610-mRNA-1:five_prime_utr;Parent=Msa1441610-mRNA-1 |
| tig0029332 | CDS | 10683 | 10823 | 10683 | ID=Msa1441610-mRNA-1:cds;Parent=Msa1441610-mRNA-1 |
| tig0029332 | CDS | 10227 | 10382 | 10227 | ID=Msa1441610-mRNA-1:cds;Parent=Msa1441610-mRNA-1 |
| tig0029332 | CDS | 8071 | 8136 | 8071 | ID=Msa1441610-mRNA-1:cds;Parent=Msa1441610-mRNA-1 |
| tig0029332 | CDS | 6780 | 7448 | 6780 | ID=Msa1441610-mRNA-1:cds;Parent=Msa1441610-mRNA-1 |
| tig0029332 | three_prime_UTR | 6763 | 6779 | 6763 | ID=Msa1441610-mRNA-1:three_prime_utr;Parent=Msa1441610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
