Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044460 | XP_013454559.1 | 89.789 | 568 | 58 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1056 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044460 | sp|Q8LPJ4|AB2E_ARATH | 81.547 | 569 | 104 | 1 | 1 | 568 | 5 | 573 | 0.0 | 972 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044460 | A0A072URT6 | 89.789 | 568 | 58 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1056 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018610 | Msa1044460 | -0.808845 | 2.535623e-50 | -8.615850e-47 |
| Msa0620050 | Msa1044460 | -0.801650 | 8.147007e-49 | -8.615850e-47 |
| Msa0644220 | Msa1044460 | -0.802792 | 4.742559e-49 | -8.615850e-47 |
| Msa0664100 | Msa1044460 | 0.975584 | 3.195122e-140 | -8.615850e-47 |
| Msa0664140 | Msa1044460 | 0.994499 | 9.422284e-208 | -8.615850e-47 |
| Msa0745010 | Msa1044460 | -0.821332 | 4.270569e-53 | -8.615850e-47 |
| Msa0784780 | Msa1044460 | -0.803371 | 3.598801e-49 | -8.615850e-47 |
| Msa0127510 | Msa1044460 | -0.809185 | 2.143832e-50 | -8.615850e-47 |
| Msa0175210 | Msa1044460 | -0.806565 | 7.733919e-50 | -8.615850e-47 |
| Msa0185540 | Msa1044460 | -0.800522 | 1.385376e-48 | -8.615850e-47 |
| Msa0224180 | Msa1044460 | -0.803044 | 4.206439e-49 | -8.615850e-47 |
| Msa0390760 | Msa1044460 | -0.803476 | 3.423576e-49 | -8.615850e-47 |
| Msa0393880 | Msa1044460 | -0.813894 | 2.031691e-51 | -8.615850e-47 |
| Msa0995130 | Msa1044460 | -0.803399 | 3.550741e-49 | -8.615850e-47 |
| Msa1037440 | Msa1044460 | -0.801382 | 9.243288e-49 | -8.615850e-47 |
| Msa1044460 | Msa1269730 | -0.808306 | 3.304403e-50 | -8.615850e-47 |
| Msa1044460 | Msa1280520 | -0.801103 | 1.054497e-48 | -8.615850e-47 |
| Msa1044460 | Msa1295480 | -0.811583 | 6.511925e-51 | -8.615850e-47 |
| Msa1044460 | Msa1330080 | -0.814170 | 1.765999e-51 | -8.615850e-47 |
| Msa1044460 | Msa1462700 | -0.801939 | 7.106089e-49 | -8.615850e-47 |
| Msa0347280 | Msa1044460 | -0.827491 | 1.519284e-54 | -8.615850e-47 |
| Msa0489330 | Msa1044460 | -0.825213 | 5.299236e-54 | -8.615850e-47 |
| Msa0586230 | Msa1044460 | 0.935159 | 1.313243e-96 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044460 | MtrunA17_Chr4g0002101 | 89.789 | 568 | 58 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1056 |
| Msa1044460 | MtrunA17_Chr1g0211721 | 85.965 | 570 | 78 | 2 | 1 | 568 | 5 | 574 | 0.0 | 1014 |
| Msa1044460 | MtrunA17_Chr1g0156551 | 83.509 | 570 | 92 | 2 | 1 | 568 | 82 | 651 | 0.0 | 988 |
| Msa1044460 | MtrunA17_Chr1g0156441 | 81.092 | 238 | 43 | 2 | 327 | 562 | 16 | 253 | 8.56e-135 | 397 |
| Msa1044460 | MtrunA17_Chr1g0156441 | 31.466 | 232 | 129 | 6 | 99 | 324 | 59 | 266 | 3.02e-25 | 105 |
| Msa1044460 | MtrunA17_Chr1g0156461 | 67.857 | 196 | 62 | 1 | 3 | 198 | 8 | 202 | 1.93e-92 | 286 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044460 | AT4G19210.1 | 81.547 | 569 | 104 | 1 | 1 | 568 | 5 | 573 | 0.0 | 972 |
| Msa1044460 | AT3G13640.1 | 72.583 | 569 | 153 | 2 | 1 | 568 | 5 | 571 | 0.0 | 870 |
| Msa1044460 | AT4G30300.1 | 64.571 | 175 | 60 | 2 | 350 | 522 | 1 | 175 | 6.30e-66 | 216 |
| Msa1044460 | AT4G30300.1 | 25.140 | 179 | 100 | 5 | 100 | 265 | 21 | 178 | 4.47e-11 | 62.8 |
Find 184 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAAGTTGGAGCCAAATT+TGG | 0.165233 | 7_2:+2800151 | Msa1044460:CDS |
| CGTAATGTTGGTGATCTTTC+AGG | 0.171930 | 7_2:+2801372 | Msa1044460:CDS |
| TATCAACTTGCCGGAGAATT+TGG | 0.186930 | 7_2:+2799891 | Msa1044460:CDS |
| GTCCACTGCCCTTAGAATTT+TGG | 0.194239 | 7_2:+2800127 | Msa1044460:CDS |
| AATGCAACAACTCAACAATT+TGG | 0.207468 | 7_2:+2804461 | Msa1044460:CDS |
| CAGTTGAATATTGGTGGTTT+GGG | 0.226415 | 7_2:+2799454 | Msa1044460:intron |
| TCATATCTCTCTCATTGTTT+TGG | 0.229197 | 7_2:-2801305 | None:intergenic |
| CCTGAACTTGCCTTGAGTTT+TGG | 0.246863 | 7_2:-2802363 | None:intergenic |
| ACTTTCCAGCCAAAATTCTA+AGG | 0.272957 | 7_2:-2800136 | None:intergenic |
| ATTATCTTTCAGTTGAATAT+TGG | 0.278478 | 7_2:+2799445 | Msa1044460:intron |
| CAACAGAAAATCTTAGGTTT+CGG | 0.282822 | 7_2:+2801807 | Msa1044460:CDS |
| TTGTTCCAACAGAAAATCTT+AGG | 0.290058 | 7_2:+2801801 | Msa1044460:CDS |
| ACAGTGAAACGACCCAAATT+TGG | 0.292894 | 7_2:-2800164 | None:intergenic |
| GATGAATTCTTTCATGTAAC+AGG | 0.293045 | 7_2:-2802679 | None:intergenic |
| TCAGTTGAATATTGGTGGTT+TGG | 0.296899 | 7_2:+2799453 | Msa1044460:intron |
| TCATCACATCTGATATAAAC+TGG | 0.305491 | 7_2:-2802718 | None:intergenic |
| AACAGAAAATCTTAGGTTTC+GGG | 0.307649 | 7_2:+2801808 | Msa1044460:CDS |
| ACTAGTTACAGAGCGGTAAA+AGG | 0.311457 | 7_2:+2799063 | None:intergenic |
| GACTTTATTTGCTGTTTGTA+TGG | 0.317741 | 7_2:+2801704 | Msa1044460:CDS |
| ACTAGAAAGGTGTGCCTTGC+CGG | 0.329398 | 7_2:-2799143 | None:intergenic |
| TCAAGGTAATAAACTAAAAC+TGG | 0.340272 | 7_2:-2804487 | None:intergenic |
| GGTCATTGCTAAGGCATAAT+AGG | 0.365075 | 7_2:+2801517 | Msa1044460:CDS |
| GGCCGAAATCATACCAAAAC+TGG | 0.365388 | 7_2:-2804808 | None:intergenic |
| CTGTGTAGCTTAAAAGTATT+AGG | 0.366567 | 7_2:-2799940 | None:intergenic |
| GAACCAAGTTTGTTGATCCT+TGG | 0.372441 | 7_2:-2804280 | None:intergenic |
| AACCAAGTTTGTTGATCCTT+GGG | 0.373348 | 7_2:-2804279 | None:intergenic |
| CTTTCGAGATGAGAGTTTGA+AGG | 0.373390 | 7_2:+2800352 | Msa1044460:CDS |
| TAACAGTTGATTTGAACTTT+GGG | 0.374527 | 7_2:-2802652 | None:intergenic |
| CTAACAGTTGATTTGAACTT+TGG | 0.376761 | 7_2:-2802653 | None:intergenic |
| CGCCCAAGGATCAACAAACT+TGG | 0.378870 | 7_2:+2804277 | Msa1044460:CDS |
| CGTTGCCCTGTCGTCATAAC+CGG | 0.380336 | 7_2:+2799551 | Msa1044460:CDS |
| ATGTTGCTCATGGCCAGTTT+TGG | 0.381147 | 7_2:+2804795 | Msa1044460:CDS |
| GATAGAGAGCAAAAGCTTGC+TGG | 0.383710 | 7_2:+2804310 | Msa1044460:CDS |
| TTGAGAAAGATGGCTTCAAC+AGG | 0.384287 | 7_2:-2804694 | None:intergenic |
| TGTAGTTGGAGGAGAATTTA+CGG | 0.386210 | 7_2:+2802391 | Msa1044460:CDS |
| ATTGATCACATTCATAAAAC+GGG | 0.386877 | 7_2:+2801255 | Msa1044460:CDS |
| AATTAAGATTATCAACTTGC+CGG | 0.388066 | 7_2:+2799882 | Msa1044460:CDS |
| GGAAAGTTGGAGCCAAATTT+GGG | 0.390741 | 7_2:+2800152 | Msa1044460:CDS |
| GTCAAAATTTCCTGCCAGTC+AGG | 0.392453 | 7_2:-2800290 | None:intergenic |
| GCTTATTACACAGTTTATAT+CGG | 0.395148 | 7_2:+2804840 | Msa1044460:three_prime_UTR |
| TGCAGCAATAATACGCTGTT+CGG | 0.396922 | 7_2:-2803900 | None:intergenic |
| TGACAGAGTTATTGTTTATG+AGG | 0.398914 | 7_2:+2804006 | Msa1044460:CDS |
| CAACAGCAATGGCAAACCTT+TGG | 0.402310 | 7_2:-2801404 | None:intergenic |
| GACATCAAATAAATTAAAAC+TGG | 0.409077 | 7_2:-2804656 | None:intergenic |
| AGCAACATCGCTAAGTATTA+CGG | 0.412171 | 7_2:-2804780 | None:intergenic |
| CCGAGGCCGGGGAAAGTGCT+TGG | 0.412378 | 7_2:+2800077 | Msa1044460:CDS |
| ACTTTCCCCGGCCTCGGAAC+CGG | 0.412394 | 7_2:-2800071 | None:intergenic |
| GGGAAAGTGCTTGGTTTGGT+TGG | 0.414362 | 7_2:+2800086 | Msa1044460:CDS |
| AGTTGTGTATTATAGGTTGC+CGG | 0.415419 | 7_2:+2800052 | Msa1044460:intron |
| TATAATACAGGTTAGCTTCA+AGG | 0.416213 | 7_2:+2801224 | Msa1044460:intron |
| ATCCTTGGGCGGAAATTAGT+TGG | 0.419970 | 7_2:-2804265 | None:intergenic |
| TGCAAAGAAAACAGCCTTTG+TGG | 0.420036 | 7_2:+2803949 | Msa1044460:CDS |
| CCAAAACTCAAGGCAAGTTC+AGG | 0.420940 | 7_2:+2802363 | Msa1044460:CDS |
| AGGTTGCCGGTTCCGAGGCC+GGG | 0.422004 | 7_2:+2800065 | Msa1044460:intron |
| GCCGGGGAAAGTGCTTGGTT+TGG | 0.422861 | 7_2:+2800082 | Msa1044460:CDS |
| ATGCAACAACTCAACAATTT+GGG | 0.423564 | 7_2:+2804462 | Msa1044460:CDS |
| GGAATTAATATCTTCTTGTC+TGG | 0.423856 | 7_2:+2801776 | Msa1044460:CDS |
| TCTATATCCATTGAGAAAGA+TGG | 0.425133 | 7_2:-2804704 | None:intergenic |
| ATAATCTTAATTGCTTCAAA+AGG | 0.425895 | 7_2:-2799871 | None:intergenic |
| GGAAAGTGCTTGGTTTGGTT+GGG | 0.426497 | 7_2:+2800087 | Msa1044460:CDS |
| TATTGATCACATTCATAAAA+CGG | 0.431274 | 7_2:+2801254 | Msa1044460:CDS |
| GTTTCCTTATGTCTTTGTCT+TGG | 0.432752 | 7_2:+2802809 | Msa1044460:CDS |
| GGATGACTCTCTTACCTTCA+AGG | 0.434243 | 7_2:+2801829 | Msa1044460:CDS |
| TAGGTTGCCGGTTCCGAGGC+CGG | 0.434876 | 7_2:+2800064 | Msa1044460:intron |
| ATTCCTTCTCTGACTGAGAA+AGG | 0.437002 | 7_2:-2801758 | None:intergenic |
| ATAGATTATTTATACCTTGA+AGG | 0.440136 | 7_2:-2801843 | None:intergenic |
| GTAATGTTGGTGATCTTTCA+GGG | 0.441278 | 7_2:+2801373 | Msa1044460:CDS |
| TCTCCACAATCACTGCTGAC+TGG | 0.442692 | 7_2:+2804058 | Msa1044460:CDS |
| ATCTTTCAGTTGAATATTGG+TGG | 0.443272 | 7_2:+2799448 | Msa1044460:intron |
| TTACCTTGATGACTAAGTTC+AGG | 0.448177 | 7_2:+2804342 | Msa1044460:CDS |
| TCTCAGATTGTTGTTATGCT+TGG | 0.451315 | 7_2:+2802416 | Msa1044460:CDS |
| GTTGTTATGCTTGGTGAGAA+TGG | 0.453138 | 7_2:+2802425 | Msa1044460:CDS |
| TGAACACGATCTTAGTGTCT+TGG | 0.458360 | 7_2:+2801670 | Msa1044460:CDS |
| CTTATGTCTTTGTCTTGGAA+AGG | 0.458540 | 7_2:+2802814 | Msa1044460:CDS |
| TGGATGTGGTATTTGTGTTA+AGG | 0.458616 | 7_2:+2799739 | Msa1044460:CDS |
| AAAGGTGTGCCTTGCCGGAC+GGG | 0.459595 | 7_2:-2799138 | None:intergenic |
| AAAGACACCACTCATAGATA+TGG | 0.460544 | 7_2:+2799916 | Msa1044460:CDS |
| TGTTGCATTGGCAAAAGAGC+AGG | 0.462602 | 7_2:-2804447 | None:intergenic |
| GTTTGCAGAACCCTCCTGAC+TGG | 0.466184 | 7_2:+2800276 | Msa1044460:intron |
| CTCCACAATCACTGCTGACT+GGG | 0.473425 | 7_2:+2804059 | Msa1044460:CDS |
| GCAGAACCCTCCTGACTGGC+AGG | 0.473883 | 7_2:+2800280 | Msa1044460:intron |
| GTTGAAGCCATCTTTCTCAA+TGG | 0.474658 | 7_2:+2804697 | Msa1044460:CDS |
| TATGGAACACCTGGTGCATA+TGG | 0.475475 | 7_2:+2801722 | Msa1044460:CDS |
| ACGCGTATTGCCATTGTCAA+TGG | 0.480880 | 7_2:+2799485 | Msa1044460:CDS |
| CTCACATCAAGATAACTAGA+AGG | 0.483153 | 7_2:-2801465 | None:intergenic |
| TTTGCAGTACAGTCAATTGA+AGG | 0.483786 | 7_2:-2804034 | None:intergenic |
| GCCGTCGCACCTTTCCCGTC+CGG | 0.484145 | 7_2:+2799124 | Msa1044460:five_prime_UTR |
| CTCTCTCTCTATTCACCGAC+AGG | 0.488866 | 7_2:+2799175 | Msa1044460:five_prime_UTR |
| AACTTTGGGTTAATTGTCTG+AGG | 0.488966 | 7_2:-2802638 | None:intergenic |
| ACCAAACCAAGCACTTTCCC+CGG | 0.489846 | 7_2:-2800083 | None:intergenic |
| ATCATACCGGTTATGACGAC+AGG | 0.490261 | 7_2:-2799557 | None:intergenic |
| TGAAAGCTGCCCAAGTTGTC+CGG | 0.491384 | 7_2:+2801496 | Msa1044460:CDS |
| TGCTGTTTGTATGGAACACC+TGG | 0.492329 | 7_2:+2801713 | Msa1044460:CDS |
| TGTTGCATTGGCAAAAGAGC+AGG | 0.493165 | 7_2:-2804614 | None:intergenic |
| GTGTCTTTGTCCAAATTCTC+CGG | 0.498181 | 7_2:-2799901 | None:intergenic |
| TATAGGAAGATTGTGTATTG+AGG | 0.500669 | 7_2:+2799670 | Msa1044460:intron |
| ATAAATTATGAGAGCTGAGA+TGG | 0.501113 | 7_2:-2804923 | None:intergenic |
| TTGTTATGCTTGGTGAGAAT+GGG | 0.504018 | 7_2:+2802426 | Msa1044460:CDS |
| AAGTTCAGGCTTCGTGTAGT+TGG | 0.505597 | 7_2:+2802377 | Msa1044460:CDS |
| GGTTGCCGGTTCCGAGGCCG+GGG | 0.505721 | 7_2:+2800066 | Msa1044460:intron |
| AAACAATGAGAGAGATATGA+AGG | 0.508578 | 7_2:+2801308 | Msa1044460:CDS |
| CACATTCATAAAACGGGGCA+AGG | 0.508774 | 7_2:+2801261 | Msa1044460:CDS |
| TAACACATACTGATAAGAAA+AGG | 0.514344 | 7_2:-2804087 | None:intergenic |
| GACAACATTCATCCGTATGC+TGG | 0.519437 | 7_2:+2802457 | Msa1044460:CDS |
| TTCAGGCTTCGTGTAGTTGG+AGG | 0.519982 | 7_2:+2802380 | Msa1044460:CDS |
| TAAAACGGGGCAAGGGAACG+TGG | 0.521293 | 7_2:+2801269 | Msa1044460:CDS |
| TACACAGTTTATATCGGTCA+TGG | 0.523785 | 7_2:+2804846 | Msa1044460:three_prime_UTR |
| TCAGATCCACCTATAGTGTC+AGG | 0.525068 | 7_2:-2802581 | None:intergenic |
| AGCCAAAATTCTAAGGGCAG+TGG | 0.528739 | 7_2:-2800129 | None:intergenic |
| ATAGAGAGCAAAAGCTTGCT+GGG | 0.529331 | 7_2:+2804311 | Msa1044460:CDS |
| TCTATCAGATAAATGTCTGC+AGG | 0.531946 | 7_2:-2803854 | None:intergenic |
| TGTGCCTTGCCGGACGGGAA+AGG | 0.532065 | 7_2:-2799133 | None:intergenic |
| CGGCGCAATCGCAAGGAGAG+TGG | 0.533803 | 7_2:-2799105 | None:intergenic |
| CTTTCCAAGACAAAGACATA+AGG | 0.539595 | 7_2:-2802813 | None:intergenic |
| TTAGCAATGACCGGACAACT+TGG | 0.539932 | 7_2:-2801506 | None:intergenic |
| CGCACCTTTCCCGTCCGGCA+AGG | 0.539935 | 7_2:+2799129 | Msa1044460:five_prime_UTR |
| TCATTGAAACCTGACACTAT+AGG | 0.540340 | 7_2:+2802572 | Msa1044460:CDS |
| CAAGTTATAGATCGTAATGT+TGG | 0.541369 | 7_2:+2801360 | Msa1044460:CDS |
| GACAGAGTTATTGTTTATGA+GGG | 0.542830 | 7_2:+2804007 | Msa1044460:CDS |
| CATCACATCTGATATAAACT+GGG | 0.543431 | 7_2:-2802717 | None:intergenic |
| CTTCCTTTCTCAGTCAGAGA+AGG | 0.543896 | 7_2:+2801755 | Msa1044460:CDS |
| CCAAGCACTTTCCCCGGCCT+CGG | 0.544800 | 7_2:-2800077 | None:intergenic |
| GAAAGGTGTGCCTTGCCGGA+CGG | 0.547606 | 7_2:-2799139 | None:intergenic |
| ACATCCAGTGCACAATTCCT+CGG | 0.548548 | 7_2:-2799723 | None:intergenic |
| ATCCCAGTCAGCAGTGATTG+TGG | 0.548844 | 7_2:-2804061 | None:intergenic |
| ACTACTTATCGAACAGCTGA+TGG | 0.549716 | 7_2:+2802745 | Msa1044460:CDS |
| AAACCTGAACTTAGTCATCA+AGG | 0.550955 | 7_2:-2804345 | None:intergenic |
| GGTGCGACGGCGCAATCGCA+AGG | 0.553576 | 7_2:-2799112 | None:intergenic |
| AAAACGGGGCAAGGGAACGT+GGG | 0.554809 | 7_2:+2801270 | Msa1044460:CDS |
| AGAGGACGGTGAAACTAGAA+AGG | 0.558715 | 7_2:-2799156 | None:intergenic |
| TTGCTGCAAAAGTTATCAAG+AGG | 0.559789 | 7_2:+2803915 | Msa1044460:CDS |
| CTATCCGAGGAATTGTGCAC+TGG | 0.564876 | 7_2:+2799719 | Msa1044460:CDS |
| TGAGCTTCAGCAGTTTCATG+TGG | 0.568344 | 7_2:-2802308 | None:intergenic |
| AAATTGTTGAGATGTTGCAT+TGG | 0.572373 | 7_2:-2804626 | None:intergenic |
| CTTTCCAGCCAAAATTCTAA+GGG | 0.572535 | 7_2:-2800135 | None:intergenic |
| ATACTTAGCGATGTTGCTCA+TGG | 0.572848 | 7_2:+2804785 | Msa1044460:CDS |
| ATCCAACTAATTTCCGCCCA+AGG | 0.577928 | 7_2:+2804263 | Msa1044460:CDS |
| TGTGTAATAAGCAGATTCAC+TGG | 0.578646 | 7_2:-2804829 | None:intergenic |
| AAATTGTTGAGTTGTTGCAT+TGG | 0.580429 | 7_2:-2804459 | None:intergenic |
| CACTATAGGTGGATCTGATG+TGG | 0.580575 | 7_2:+2802586 | Msa1044460:CDS |
| AAGTTGTCCGGTCATTGCTA+AGG | 0.581006 | 7_2:+2801508 | Msa1044460:CDS |
| CGCAATCGCAAGGAGAGTGG+AGG | 0.581707 | 7_2:-2799102 | None:intergenic |
| TATTATGCCTTAGCAATGAC+CGG | 0.582030 | 7_2:-2801515 | None:intergenic |
| CAGTGCACAATTCCTCGGAT+AGG | 0.583504 | 7_2:-2799718 | None:intergenic |
| TTGTGTGAAATATTGAACTC+AGG | 0.583680 | 7_2:-2802614 | None:intergenic |
| AAAATTTCCTGCCAGTCAGG+AGG | 0.583757 | 7_2:-2800287 | None:intergenic |
| TCGGAATCAAGATGTGCACT+TGG | 0.586777 | 7_2:-2803881 | None:intergenic |
| TAGCAATGACCGGACAACTT+GGG | 0.588276 | 7_2:-2801505 | None:intergenic |
| ACTAAAAGAATACCAGCATA+CGG | 0.589186 | 7_2:-2802469 | None:intergenic |
| CATGCAGAGCATATGTTGGT+TGG | 0.591317 | 7_2:+2804740 | Msa1044460:CDS |
| ATCAGCTGTTCGATAAGTAG+TGG | 0.593241 | 7_2:-2802743 | None:intergenic |
| ATGGCGATAAACTTAATATG+TGG | 0.593735 | 7_2:-2804904 | None:intergenic |
| AGTTGAATATTGGTGGTTTG+GGG | 0.595891 | 7_2:+2799455 | Msa1044460:intron |
| GAGGAATTGTGCACTGGATG+TGG | 0.596595 | 7_2:+2799725 | Msa1044460:CDS |
| GCTACATGCAGAGCATATGT+TGG | 0.599972 | 7_2:+2804736 | Msa1044460:CDS |
| TAGGAGGGCAGCAACAGCAA+TGG | 0.601333 | 7_2:-2801415 | None:intergenic |
| AAATTTCCTGCCAGTCAGGA+GGG | 0.605918 | 7_2:-2800286 | None:intergenic |
| ATTATAGGTTGCCGGTTCCG+AGG | 0.606131 | 7_2:+2800060 | Msa1044460:intron |
| CAAGTTTGTTGATCCTTGGG+CGG | 0.607651 | 7_2:-2804276 | None:intergenic |
| CTGTCGGTGAATAGAGAGAG+AGG | 0.609135 | 7_2:-2799174 | None:intergenic |
| ATGCTTGGTGAGAATGGGAC+GGG | 0.610087 | 7_2:+2802431 | Msa1044460:CDS |
| TAATGTTGGTGATCTTTCAG+GGG | 0.618828 | 7_2:+2801374 | Msa1044460:CDS |
| GGTTGAGCATGATTTCATCA+TGG | 0.619459 | 7_2:+2803970 | Msa1044460:CDS |
| GCCGGACGGGAAAGGTGCGA+CGG | 0.621346 | 7_2:-2799125 | None:intergenic |
| GTGGCATCATTATTCAGTCA+AGG | 0.625338 | 7_2:-2804885 | None:intergenic |
| AAACGGGGCAAGGGAACGTG+GGG | 0.627128 | 7_2:+2801271 | Msa1044460:CDS |
| GCATCTGTCTCCATTGACAA+TGG | 0.633618 | 7_2:-2799495 | None:intergenic |
| GCAATCGCAAGGAGAGTGGA+GGG | 0.634318 | 7_2:-2799101 | None:intergenic |
| ACATTCATAAAACGGGGCAA+GGG | 0.634571 | 7_2:+2801262 | Msa1044460:CDS |
| TTGAAACCTGACACTATAGG+TGG | 0.643934 | 7_2:+2802575 | Msa1044460:CDS |
| GAAATCATGCTCAACCACAA+AGG | 0.644019 | 7_2:-2803963 | None:intergenic |
| CGGTGAATAGAGAGAGAGGA+CGG | 0.653776 | 7_2:-2799170 | None:intergenic |
| AATGTTGGTGATCTTTCAGG+GGG | 0.657975 | 7_2:+2801375 | Msa1044460:CDS |
| CCAACCATGACCAAAACTCA+AGG | 0.658017 | 7_2:+2802353 | Msa1044460:CDS |
| GAAGATTGCTTACCTATCCG+AGG | 0.658534 | 7_2:+2799706 | Msa1044460:CDS |
| GTTACGACTCCATATGCACC+AGG | 0.659399 | 7_2:-2801731 | None:intergenic |
| ATTAGGACCATATCTATGAG+TGG | 0.668366 | 7_2:-2799923 | None:intergenic |
| CAACAAACTTGGTTCAACCA+AGG | 0.671800 | 7_2:+2804288 | Msa1044460:CDS |
| GTTATCTTGATGTGAGACAG+AGG | 0.675184 | 7_2:+2801472 | Msa1044460:CDS |
| TATGCTTGGTGAGAATGGGA+CGG | 0.683302 | 7_2:+2802430 | Msa1044460:CDS |
| ATCACATCTGATATAAACTG+GGG | 0.688133 | 7_2:-2802716 | None:intergenic |
| TGAGAAAGATGGCTTCAACA+GGG | 0.694330 | 7_2:-2804693 | None:intergenic |
| TCATACCGGTTATGACGACA+GGG | 0.697152 | 7_2:-2799556 | None:intergenic |
| TTGATCACATTCATAAAACG+GGG | 0.709656 | 7_2:+2801256 | Msa1044460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GGTATAAAAAAAAAAAAAAA+AGG | - | chr7_2:2800205-2800224 | None:intergenic | 10.0% |
| !! | TTGTAAAAAAAAAAAATTAC+TGG | - | chr7_2:2800484-2800503 | None:intergenic | 10.0% |
| !! | ATTACATAATAATTGATAAA+TGG | - | chr7_2:2800535-2800554 | None:intergenic | 10.0% |
| !! | ATTTATCAATTATTATGTAA+TGG | + | chr7_2:2800534-2800553 | Msa1044460:intron | 10.0% |
| !!! | AAAATGTTTTTCAAAATTAA+AGG | - | chr7_2:2801040-2801059 | None:intergenic | 10.0% |
| !! | TATTCTTATAAATTAGATAT+TGG | + | chr7_2:2802184-2802203 | Msa1044460:intron | 10.0% |
| !! | GAATTCAATTAATATTTATA+TGG | - | chr7_2:2803641-2803660 | None:intergenic | 10.0% |
| !!! | TGAAATTTTATGTTAATGTT+TGG | + | chr7_2:2799604-2799623 | Msa1044460:intron | 15.0% |
| !!! | AAAAAAAAAAAGGCTAATTT+TGG | - | chr7_2:2800195-2800214 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTATACCG+TGG | + | chr7_2:2800206-2800225 | Msa1044460:intron | 15.0% |
| !! | TACAAAACGATATTAAATAA+AGG | - | chr7_2:2800390-2800409 | None:intergenic | 15.0% |
| !!! | GTTTTTCTGATTTTTTTTAT+TGG | + | chr7_2:2800508-2800527 | Msa1044460:intron | 15.0% |
| !! | TTCAATATATGTTATAATAC+AGG | + | chr7_2:2801212-2801231 | Msa1044460:intron | 15.0% |
| !!! | TTTTTATTCAAATAAACTCA+TGG | + | chr7_2:2802037-2802056 | Msa1044460:intron | 15.0% |
| !!! | AAAAGTTCTAACAAAATATA+AGG | - | chr7_2:2802119-2802138 | None:intergenic | 15.0% |
| !!! | ATAAGAATATTTTCATTTTG+AGG | - | chr7_2:2802173-2802192 | None:intergenic | 15.0% |
| !!! | TGATTTTTTATGATTTGTTA+TGG | + | chr7_2:2803040-2803059 | Msa1044460:intron | 15.0% |
| !!! | TCATATTTTAACAAAAAGAT+AGG | - | chr7_2:2803203-2803222 | None:intergenic | 15.0% |
| !!! | TCTTTTTGTTAAAATATGAT+TGG | + | chr7_2:2803204-2803223 | Msa1044460:intron | 15.0% |
| !! | TCAAATGAAAATATTGATAA+TGG | + | chr7_2:2803449-2803468 | Msa1044460:intron | 15.0% |
| !!! | CAAATGAAAATATTGATAAT+GGG | + | chr7_2:2803450-2803469 | Msa1044460:intron | 15.0% |
| !!! | TATGTGTTATTATTTTTCAA+TGG | + | chr7_2:2804101-2804120 | Msa1044460:CDS | 15.0% |
| !!! | TGAATTTATGTTTTTACGAT+AGG | + | chr7_2:2799256-2799275 | Msa1044460:intron | 20.0% |
| !! | ATTATCTTTCAGTTGAATAT+TGG | + | chr7_2:2799445-2799464 | Msa1044460:intron | 20.0% |
| !! | ATAATCTTAATTGCTTCAAA+AGG | - | chr7_2:2799874-2799893 | None:intergenic | 20.0% |
| !!! | CATATTAACACAGAATTTTT+AGG | - | chr7_2:2799988-2800007 | None:intergenic | 20.0% |
| !!! | AGGAAATTTTGACTTATTAT+CGG | + | chr7_2:2800300-2800319 | Msa1044460:CDS | 20.0% |
| !!! | TATCTTATTGATTTAGACTT+TGG | + | chr7_2:2800422-2800441 | Msa1044460:intron | 20.0% |
| !! | TAGAATTTCTTTAATTGAGA+AGG | + | chr7_2:2800583-2800602 | Msa1044460:intron | 20.0% |
| !! | AGAATTTCTTTAATTGAGAA+GGG | + | chr7_2:2800584-2800603 | Msa1044460:intron | 20.0% |
| !!! | ATGTTTATTTCTACATTACA+AGG | - | chr7_2:2800925-2800944 | None:intergenic | 20.0% |
| !! | TATTGATCACATTCATAAAA+CGG | + | chr7_2:2801254-2801273 | Msa1044460:CDS | 20.0% |
| !! | ATAGATTATTTATACCTTGA+AGG | - | chr7_2:2801846-2801865 | None:intergenic | 20.0% |
| !!! | ATTCAGAAACCAAATATTTT+CGG | - | chr7_2:2802014-2802033 | None:intergenic | 20.0% |
| !!! | GAACTTTTAGATATTGATAT+TGG | + | chr7_2:2802131-2802150 | Msa1044460:intron | 20.0% |
| !! | TTTGTTAAAATATGATTGGA+TGG | + | chr7_2:2803208-2803227 | Msa1044460:intron | 20.0% |
| !!! | CTATTTCGTTTGAAATAAAT+AGG | - | chr7_2:2803790-2803809 | None:intergenic | 20.0% |
| !! | GACATCAAATAAATTAAAAC+TGG | - | chr7_2:2804659-2804678 | None:intergenic | 20.0% |
| ! | ATGATTATGCGTGTAATTAT+AGG | + | chr7_2:2799653-2799672 | Msa1044460:intron | 25.0% |
| ! | AATTAAGATTATCAACTTGC+CGG | + | chr7_2:2799882-2799901 | Msa1044460:CDS | 25.0% |
| !!! | GGAAATTTTGACTTATTATC+GGG | + | chr7_2:2800301-2800320 | Msa1044460:CDS | 25.0% |
| !!! | GAAATTTTGACTTATTATCG+GGG | + | chr7_2:2800302-2800321 | Msa1044460:CDS | 25.0% |
| ! | CAATTATTATGTAATGGTAG+AGG | + | chr7_2:2800540-2800559 | Msa1044460:intron | 25.0% |
| ! | AAGAAATTCTACAACACTAT+AGG | - | chr7_2:2800574-2800593 | None:intergenic | 25.0% |
| ! | TATCTATCTATCTATCTATG+CGG | - | chr7_2:2800806-2800825 | None:intergenic | 25.0% |
| !! | TAGATAGATAATCTTTGAAG+AGG | + | chr7_2:2800820-2800839 | Msa1044460:intron | 25.0% |
| ! | TGCACATTCAGAAAAATATA+AGG | - | chr7_2:2801094-2801113 | None:intergenic | 25.0% |
| ! | ATTGATCACATTCATAAAAC+GGG | + | chr7_2:2801255-2801274 | Msa1044460:CDS | 25.0% |
| ! | AAATTCAGATTTATCTTGAC+TGG | - | chr7_2:2801614-2801633 | None:intergenic | 25.0% |
| !!! | TGGCTTTATATTCCATAAAT+GGG | - | chr7_2:2801878-2801897 | None:intergenic | 25.0% |
| !!! | TTGGCTTTATATTCCATAAA+TGG | - | chr7_2:2801879-2801898 | None:intergenic | 25.0% |
| ! | TATGGAATATAAAGCCAATT+TGG | + | chr7_2:2801881-2801900 | Msa1044460:intron | 25.0% |
| ! | ATGGAATATAAAGCCAATTT+GGG | + | chr7_2:2801882-2801901 | Msa1044460:intron | 25.0% |
| !! | ACTTTTCTCAATTCTATTGT+TGG | - | chr7_2:2801987-2802006 | None:intergenic | 25.0% |
| !!! | TAACAGTTGATTTGAACTTT+GGG | - | chr7_2:2802655-2802674 | None:intergenic | 25.0% |
| !!! | AAAGAAGTTTTGAATCTTTC+TGG | + | chr7_2:2802770-2802789 | Msa1044460:CDS | 25.0% |
| ! | TAAAAAGGAAAGAAAAAGCA+GGG | - | chr7_2:2802903-2802922 | None:intergenic | 25.0% |
| ! | AGCTATTCAAGAATGTAAAA+AGG | - | chr7_2:2802918-2802937 | None:intergenic | 25.0% |
| !! | AAAAAAAACCGAGTGTATTT+TGG | + | chr7_2:2803138-2803157 | Msa1044460:intron | 25.0% |
| !! | AAAAAAACCGAGTGTATTTT+GGG | + | chr7_2:2803139-2803158 | Msa1044460:intron | 25.0% |
| !!! | TATTTTGGGCTAGTTTTTTT+AGG | + | chr7_2:2803153-2803172 | Msa1044460:intron | 25.0% |
| !! | AAAAGATAGGCCATATTTTT+GGG | - | chr7_2:2803190-2803209 | None:intergenic | 25.0% |
| !! | AAAAAGATAGGCCATATTTT+TGG | - | chr7_2:2803191-2803210 | None:intergenic | 25.0% |
| !! | AAAAAAAACCGAGTGTATTT+TGG | + | chr7_2:2803138-2803157 | Msa1044460:intron | 25.0% |
| !! | AAAAAAACCGAGTGTATTTT+GGG | + | chr7_2:2803139-2803158 | Msa1044460:intron | 25.0% |
| !!! | TATTTTGGGCTAGTTTTTTT+AGG | + | chr7_2:2803153-2803172 | Msa1044460:intron | 25.0% |
| ! | ATTGAATTCCTTATCCATTA+CGG | + | chr7_2:2803652-2803671 | Msa1044460:intron | 25.0% |
| !!! | ATTTTTAGAACTATACCTCT+TGG | + | chr7_2:2803725-2803744 | Msa1044460:intron | 25.0% |
| ! | TAACACATACTGATAAGAAA+AGG | - | chr7_2:2804090-2804109 | None:intergenic | 25.0% |
| ! | TCAAGGTAATAAACTAAAAC+TGG | - | chr7_2:2804490-2804509 | None:intergenic | 25.0% |
| ! | GCTTATTACACAGTTTATAT+CGG | + | chr7_2:2804840-2804859 | Msa1044460:three_prime_UTR | 25.0% |
| ATCTTTCAGTTGAATATTGG+TGG | + | chr7_2:2799448-2799467 | Msa1044460:intron | 30.0% | |
| TATAGGAAGATTGTGTATTG+AGG | + | chr7_2:2799670-2799689 | Msa1044460:intron | 30.0% | |
| !! | ATTTGTGTTAAGGTATTGAG+AGG | + | chr7_2:2799749-2799768 | Msa1044460:intron | 30.0% |
| !! | CTGTGTAGCTTAAAAGTATT+AGG | - | chr7_2:2799943-2799962 | None:intergenic | 30.0% |
| ! | CTAATACTTTTAAGCTACAC+AGG | + | chr7_2:2799941-2799960 | Msa1044460:CDS | 30.0% |
| TCAAGAGAGTTGTGTATTAT+AGG | + | chr7_2:2800045-2800064 | Msa1044460:intron | 30.0% | |
| !!! | TTTTTTTTTATACCGTGGAG+TGG | + | chr7_2:2800211-2800230 | Msa1044460:intron | 30.0% |
| !! | CTTATTGATTTAGACTTTGG+TGG | + | chr7_2:2800425-2800444 | Msa1044460:intron | 30.0% |
| ATGTTGACGTTTCATTAACT+GGG | + | chr7_2:2800629-2800648 | Msa1044460:intron | 30.0% | |
| AAAAGCGATACACTAATTCA+TGG | + | chr7_2:2800693-2800712 | Msa1044460:intron | 30.0% | |
| ! | ATAGATAATCTTTGAAGAGG+TGG | + | chr7_2:2800823-2800842 | Msa1044460:intron | 30.0% |
| ! | TAGATAATCTTTGAAGAGGT+GGG | + | chr7_2:2800824-2800843 | Msa1044460:intron | 30.0% |
| AACAGTATCAAAGTTGAACT+CGG | - | chr7_2:2800858-2800877 | None:intergenic | 30.0% | |
| ! | ACTGCAGTACTTTTATGATA+TGG | - | chr7_2:2800886-2800905 | None:intergenic | 30.0% |
| AGTACTGCAGTAATACAAAT+TGG | + | chr7_2:2800895-2800914 | Msa1044460:intron | 30.0% | |
| ATATAAGGACAACAAATGCT+AGG | - | chr7_2:2801079-2801098 | None:intergenic | 30.0% | |
| ! | TTAAGAAAGGTTCTTCCTTT+TGG | + | chr7_2:2801173-2801192 | Msa1044460:intron | 30.0% |
| TAAGCACATTAGAAACCAAA+AGG | - | chr7_2:2801191-2801210 | None:intergenic | 30.0% | |
| !! | TATAATACAGGTTAGCTTCA+AGG | + | chr7_2:2801224-2801243 | Msa1044460:intron | 30.0% |
| TTGATCACATTCATAAAACG+GGG | + | chr7_2:2801256-2801275 | Msa1044460:CDS | 30.0% | |
| ! | TCATATCTCTCTCATTGTTT+TGG | - | chr7_2:2801308-2801327 | None:intergenic | 30.0% |
| AAACAATGAGAGAGATATGA+AGG | + | chr7_2:2801308-2801327 | Msa1044460:CDS | 30.0% | |
| CAAGTTATAGATCGTAATGT+TGG | + | chr7_2:2801360-2801379 | Msa1044460:CDS | 30.0% | |
| ! | ACATGTATATCTCAGCTTTT+AGG | - | chr7_2:2801437-2801456 | None:intergenic | 30.0% |
| TTTATCTTGACTGGAAATCA+AGG | - | chr7_2:2801605-2801624 | None:intergenic | 30.0% | |
| TTCAACAACAATTACATAGC+TGG | - | chr7_2:2801654-2801673 | None:intergenic | 30.0% | |
| !! | GACTTTATTTGCTGTTTGTA+TGG | + | chr7_2:2801704-2801723 | Msa1044460:CDS | 30.0% |
| GGAATTAATATCTTCTTGTC+TGG | + | chr7_2:2801776-2801795 | Msa1044460:CDS | 30.0% | |
| TTGTTCCAACAGAAAATCTT+AGG | + | chr7_2:2801801-2801820 | Msa1044460:CDS | 30.0% | |
| CAACAGAAAATCTTAGGTTT+CGG | + | chr7_2:2801807-2801826 | Msa1044460:CDS | 30.0% | |
| AACAGAAAATCTTAGGTTTC+GGG | + | chr7_2:2801808-2801827 | Msa1044460:CDS | 30.0% | |
| CTTTATATTCCATAAATGGG+AGG | - | chr7_2:2801875-2801894 | None:intergenic | 30.0% | |
| TCAATCAATCTCAGTATTGT+AGG | - | chr7_2:2801944-2801963 | None:intergenic | 30.0% | |
| ! | AAAGTAGTGCCGAAAATATT+TGG | + | chr7_2:2802002-2802021 | Msa1044460:intron | 30.0% |
| TATAAATGATGCATCGCAAA+AGG | - | chr7_2:2802072-2802091 | None:intergenic | 30.0% | |
| ACTAAAAGAATACCAGCATA+CGG | - | chr7_2:2802472-2802491 | None:intergenic | 30.0% | |
| AATGAACCAACCTGAATAAA+AGG | - | chr7_2:2802557-2802576 | None:intergenic | 30.0% | |
| TTGTGTGAAATATTGAACTC+AGG | - | chr7_2:2802617-2802636 | None:intergenic | 30.0% | |
| !! | CTAACAGTTGATTTGAACTT+TGG | - | chr7_2:2802656-2802675 | None:intergenic | 30.0% |
| GATGAATTCTTTCATGTAAC+AGG | - | chr7_2:2802682-2802701 | None:intergenic | 30.0% | |
| ATCACATCTGATATAAACTG+GGG | - | chr7_2:2802719-2802738 | None:intergenic | 30.0% | |
| CATCACATCTGATATAAACT+GGG | - | chr7_2:2802720-2802739 | None:intergenic | 30.0% | |
| TCATCACATCTGATATAAAC+TGG | - | chr7_2:2802721-2802740 | None:intergenic | 30.0% | |
| GTAAAAAGGAAAGAAAAAGC+AGG | - | chr7_2:2802904-2802923 | None:intergenic | 30.0% | |
| !! | CCGATATAGACAATTTTAAC+CGG | - | chr7_2:2803077-2803096 | None:intergenic | 30.0% |
| CCGGTTAAAATTGTCTATAT+CGG | + | chr7_2:2803074-2803093 | Msa1044460:intron | 30.0% | |
| !!! | CTTTTTTATATGGGCCAAAT+GGG | + | chr7_2:2803104-2803123 | Msa1044460:intron | 30.0% |
| !! | TGAAAATATTGATAATGGGC+CGG | + | chr7_2:2803454-2803473 | Msa1044460:intron | 30.0% |
| ! | CTACTTCCATGTCAATTTTT+CGG | + | chr7_2:2803584-2803603 | Msa1044460:intron | 30.0% |
| TGACAGAGTTATTGTTTATG+AGG | + | chr7_2:2804006-2804025 | Msa1044460:CDS | 30.0% | |
| GACAGAGTTATTGTTTATGA+GGG | + | chr7_2:2804007-2804026 | Msa1044460:CDS | 30.0% | |
| ! | AAAATTATGTTTTGCTCTCG+TGG | + | chr7_2:2804171-2804190 | Msa1044460:intron | 30.0% |
| !!! | GTTTATTTTTGCATTGCTCT+TGG | + | chr7_2:2804372-2804391 | Msa1044460:intron | 30.0% |
| ! | AAATTGTTGAGTTGTTGCAT+TGG | - | chr7_2:2804462-2804481 | None:intergenic | 30.0% |
| AATGCAACAACTCAACAATT+TGG | + | chr7_2:2804461-2804480 | Msa1044460:CDS | 30.0% | |
| ATGCAACAACTCAACAATTT+GGG | + | chr7_2:2804462-2804481 | Msa1044460:CDS | 30.0% | |
| TTTGCATTTACTATTGCTCT+TGG | + | chr7_2:2804538-2804557 | Msa1044460:intron | 30.0% | |
| AAATTGTTGAGATGTTGCAT+TGG | - | chr7_2:2804629-2804648 | None:intergenic | 30.0% | |
| TCTATATCCATTGAGAAAGA+TGG | - | chr7_2:2804707-2804726 | None:intergenic | 30.0% | |
| ATGGCGATAAACTTAATATG+TGG | - | chr7_2:2804907-2804926 | None:intergenic | 30.0% | |
| ATAAATTATGAGAGCTGAGA+TGG | - | chr7_2:2804926-2804945 | None:intergenic | 30.0% | |
| AACACAATCAAAAAGCCGAT+CGG | - | chr7_2:2799208-2799227 | None:intergenic | 35.0% | |
| ! | TCAGTTGAATATTGGTGGTT+TGG | + | chr7_2:2799453-2799472 | Msa1044460:intron | 35.0% |
| ! | CAGTTGAATATTGGTGGTTT+GGG | + | chr7_2:2799454-2799473 | Msa1044460:intron | 35.0% |
| ! | AGTTGAATATTGGTGGTTTG+GGG | + | chr7_2:2799455-2799474 | Msa1044460:intron | 35.0% |
| AACAAAACACCGAATCATAC+CGG | - | chr7_2:2799573-2799592 | None:intergenic | 35.0% | |
| TGGATGTGGTATTTGTGTTA+AGG | + | chr7_2:2799739-2799758 | Msa1044460:CDS | 35.0% | |
| ! | ATGATTTTGCGACGATAATC+TGG | + | chr7_2:2799805-2799824 | Msa1044460:intron | 35.0% |
| ! | TGATTTTGCGACGATAATCT+GGG | + | chr7_2:2799806-2799825 | Msa1044460:intron | 35.0% |
| AAAGACACCACTCATAGATA+TGG | + | chr7_2:2799916-2799935 | Msa1044460:CDS | 35.0% | |
| ATTAGGACCATATCTATGAG+TGG | - | chr7_2:2799926-2799945 | None:intergenic | 35.0% | |
| TTTAGGTAACCACAGCTAAA+AGG | - | chr7_2:2799971-2799990 | None:intergenic | 35.0% | |
| AGTTGTGTATTATAGGTTGC+CGG | + | chr7_2:2800052-2800071 | Msa1044460:intron | 35.0% | |
| TTGGTTGGGAAAAATGGAAT+TGG | + | chr7_2:2800101-2800120 | Msa1044460:CDS | 35.0% | |
| TGGTTGGGAAAAATGGAATT+GGG | + | chr7_2:2800102-2800121 | Msa1044460:CDS | 35.0% | |
| CTTTCCAGCCAAAATTCTAA+GGG | - | chr7_2:2800138-2800157 | None:intergenic | 35.0% | |
| ACTTTCCAGCCAAAATTCTA+AGG | - | chr7_2:2800139-2800158 | None:intergenic | 35.0% | |
| !!! | TAGAATTTTGGCTGGAAAGT+TGG | + | chr7_2:2800139-2800158 | Msa1044460:CDS | 35.0% |
| CATGTTGACGTTTCATTAAC+TGG | + | chr7_2:2800628-2800647 | Msa1044460:intron | 35.0% | |
| ATGTTGACATTGACATTAGC+TGG | + | chr7_2:2800722-2800741 | Msa1044460:intron | 35.0% | |
| TGTTGACATTGACATTAGCT+GGG | + | chr7_2:2800723-2800742 | Msa1044460:intron | 35.0% | |
| ! | AGATAATCTTTGAAGAGGTG+GGG | + | chr7_2:2800825-2800844 | Msa1044460:intron | 35.0% |
| GATAGTGTGACACTTAAGAA+AGG | + | chr7_2:2801160-2801179 | Msa1044460:intron | 35.0% | |
| !! | GTAATGTTGGTGATCTTTCA+GGG | + | chr7_2:2801373-2801392 | Msa1044460:CDS | 35.0% |
| !! | TAATGTTGGTGATCTTTCAG+GGG | + | chr7_2:2801374-2801393 | Msa1044460:CDS | 35.0% |
| !! | GTATATCTCAGCTTTTAGGA+GGG | - | chr7_2:2801433-2801452 | None:intergenic | 35.0% |
| ! | TGTATATCTCAGCTTTTAGG+AGG | - | chr7_2:2801434-2801453 | None:intergenic | 35.0% |
| CTCACATCAAGATAACTAGA+AGG | - | chr7_2:2801468-2801487 | None:intergenic | 35.0% | |
| TATTATGCCTTAGCAATGAC+CGG | - | chr7_2:2801518-2801537 | None:intergenic | 35.0% | |
| ! | CGAAACCTAAGATTTTCTGT+TGG | - | chr7_2:2801809-2801828 | None:intergenic | 35.0% |
| ATATTCCATAAATGGGAGGT+AGG | - | chr7_2:2801871-2801890 | None:intergenic | 35.0% | |
| CAATACTGAGATTGATTGAG+TGG | + | chr7_2:2801945-2801964 | Msa1044460:intron | 35.0% | |
| CTAGACACAACATTAAAGCA+GGG | - | chr7_2:2802276-2802295 | None:intergenic | 35.0% | |
| TGTAGTTGGAGGAGAATTTA+CGG | + | chr7_2:2802391-2802410 | Msa1044460:CDS | 35.0% | |
| ! | TCTCAGATTGTTGTTATGCT+TGG | + | chr7_2:2802416-2802435 | Msa1044460:CDS | 35.0% |
| ! | TTGTTATGCTTGGTGAGAAT+GGG | + | chr7_2:2802426-2802445 | Msa1044460:CDS | 35.0% |
| TCATTGAAACCTGACACTAT+AGG | + | chr7_2:2802572-2802591 | Msa1044460:CDS | 35.0% | |
| ! | AACTTTGGGTTAATTGTCTG+AGG | - | chr7_2:2802641-2802660 | None:intergenic | 35.0% |
| !!! | GAAGTTTTGAATCTTTCTGG+TGG | + | chr7_2:2802773-2802792 | Msa1044460:CDS | 35.0% |
| GTTTCCTTATGTCTTTGTCT+TGG | + | chr7_2:2802809-2802828 | Msa1044460:CDS | 35.0% | |
| CTTTCCAAGACAAAGACATA+AGG | - | chr7_2:2802816-2802835 | None:intergenic | 35.0% | |
| CTTATGTCTTTGTCTTGGAA+AGG | + | chr7_2:2802814-2802833 | Msa1044460:CDS | 35.0% | |
| ! | GCAATCTTATGCAGTTTTCA+AGG | - | chr7_2:2802855-2802874 | None:intergenic | 35.0% |
| TTCATAGTTTCCTTTATGCC+AGG | + | chr7_2:2802937-2802956 | Msa1044460:intron | 35.0% | |
| TTAGAGTGATGACAAGATCA+AGG | + | chr7_2:2802996-2803015 | Msa1044460:intron | 35.0% | |
| TAGAGTGATGACAAGATCAA+GGG | + | chr7_2:2802997-2803016 | Msa1044460:intron | 35.0% | |
| TAAAATTGTCTATATCGGCC+CGG | + | chr7_2:2803079-2803098 | Msa1044460:intron | 35.0% | |
| CCATTTGGCCCATATAAAAA+AGG | - | chr7_2:2803106-2803125 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTATATGGGCCAAA+TGG | + | chr7_2:2803103-2803122 | Msa1044460:intron | 35.0% |
| AAACTAGCCCAAAATACACT+CGG | - | chr7_2:2803149-2803168 | None:intergenic | 35.0% | |
| AAACTAGCCCAAAATACACT+CGG | - | chr7_2:2803149-2803168 | None:intergenic | 35.0% | |
| GAAGTAGAGCTGTCAAAAAT+GGG | - | chr7_2:2803571-2803590 | None:intergenic | 35.0% | |
| GTGTTTCCGAAAAATTGACA+TGG | - | chr7_2:2803593-2803612 | None:intergenic | 35.0% | |
| ! | ATCTATTTGTGTTGACGTCA+TGG | + | chr7_2:2803698-2803717 | Msa1044460:intron | 35.0% |
| TCTATCAGATAAATGTCTGC+AGG | - | chr7_2:2803857-2803876 | None:intergenic | 35.0% | |
| TTGCTGCAAAAGTTATCAAG+AGG | + | chr7_2:2803915-2803934 | Msa1044460:CDS | 35.0% | |
| TTTGCAGTACAGTCAATTGA+AGG | - | chr7_2:2804037-2804056 | None:intergenic | 35.0% | |
| !! | AACCAAGTTTGTTGATCCTT+GGG | - | chr7_2:2804282-2804301 | None:intergenic | 35.0% |
| ! | TTACCTTGATGACTAAGTTC+AGG | + | chr7_2:2804342-2804361 | Msa1044460:CDS | 35.0% |
| AAACCTGAACTTAGTCATCA+AGG | - | chr7_2:2804348-2804367 | None:intergenic | 35.0% | |
| !! | CTTGGAATACTTTGCTTTTG+CGG | + | chr7_2:2804390-2804409 | Msa1044460:intron | 35.0% |
| TGCAACAATAGAAACAGAGT+CGG | - | chr7_2:2804426-2804445 | None:intergenic | 35.0% | |
| GCAACAATAGAAAACAGAGT+CGG | - | chr7_2:2804592-2804611 | None:intergenic | 35.0% | |
| AGCAACATCGCTAAGTATTA+CGG | - | chr7_2:2804783-2804802 | None:intergenic | 35.0% | |
| TGTGTAATAAGCAGATTCAC+TGG | - | chr7_2:2804832-2804851 | None:intergenic | 35.0% | |
| TACACAGTTTATATCGGTCA+TGG | + | chr7_2:2804846-2804865 | Msa1044460:three_prime_UTR | 35.0% | |
| ACACAATCAAAAAGCCGATC+GGG | - | chr7_2:2799207-2799226 | None:intergenic | 40.0% | |
| AGATGCAAGCCAAAAAAGTG+TGG | + | chr7_2:2799512-2799531 | Msa1044460:CDS | 40.0% | |
| TCGTCATAACCGGTATGATT+CGG | + | chr7_2:2799561-2799580 | Msa1044460:intron | 40.0% | |
| TATCAACTTGCCGGAGAATT+TGG | + | chr7_2:2799891-2799910 | Msa1044460:CDS | 40.0% | |
| GTGTCTTTGTCCAAATTCTC+CGG | - | chr7_2:2799904-2799923 | None:intergenic | 40.0% | |
| !! | CTTGGTTTGGTTGGGAAAAA+TGG | + | chr7_2:2800095-2800114 | Msa1044460:CDS | 40.0% |
| TGGAAAGTTGGAGCCAAATT+TGG | + | chr7_2:2800151-2800170 | Msa1044460:CDS | 40.0% | |
| GGAAAGTTGGAGCCAAATTT+GGG | + | chr7_2:2800152-2800171 | Msa1044460:CDS | 40.0% | |
| ACAGTGAAACGACCCAAATT+TGG | - | chr7_2:2800167-2800186 | None:intergenic | 40.0% | |
| CTTTCGAGATGAGAGTTTGA+AGG | + | chr7_2:2800352-2800371 | Msa1044460:CDS | 40.0% | |
| GTTGACATTGACATTAGCTG+GGG | + | chr7_2:2800724-2800743 | Msa1044460:intron | 40.0% | |
| GGTATGTTGTGGTTGTGATT+GGG | + | chr7_2:2800745-2800764 | Msa1044460:intron | 40.0% | |
| GATTGGGATTTGTGAGTGTT+TGG | + | chr7_2:2800761-2800780 | Msa1044460:intron | 40.0% | |
| ACATTCATAAAACGGGGCAA+GGG | + | chr7_2:2801262-2801281 | Msa1044460:CDS | 40.0% | |
| !! | CGTAATGTTGGTGATCTTTC+AGG | + | chr7_2:2801372-2801391 | Msa1044460:CDS | 40.0% |
| !! | AATGTTGGTGATCTTTCAGG+GGG | + | chr7_2:2801375-2801394 | Msa1044460:CDS | 40.0% |
| GTTATCTTGATGTGAGACAG+AGG | + | chr7_2:2801472-2801491 | Msa1044460:CDS | 40.0% | |
| GGTCATTGCTAAGGCATAAT+AGG | + | chr7_2:2801517-2801536 | Msa1044460:CDS | 40.0% | |
| TGAACACGATCTTAGTGTCT+TGG | + | chr7_2:2801670-2801689 | Msa1044460:CDS | 40.0% | |
| ATTCCTTCTCTGACTGAGAA+AGG | - | chr7_2:2801761-2801780 | None:intergenic | 40.0% | |
| TATCTCCTACCTCCCATTTA+TGG | + | chr7_2:2801863-2801882 | Msa1044460:intron | 40.0% | |
| CCTAGACACAACATTAAAGC+AGG | - | chr7_2:2802277-2802296 | None:intergenic | 40.0% | |
| CCTGCTTTAATGTTGTGTCT+AGG | + | chr7_2:2802274-2802293 | Msa1044460:intron | 40.0% | |
| !! | CTTGAGTTTTGGTCATGGTT+GGG | - | chr7_2:2802355-2802374 | None:intergenic | 40.0% |
| ! | GTTGTTATGCTTGGTGAGAA+TGG | + | chr7_2:2802425-2802444 | Msa1044460:CDS | 40.0% |
| ! | TTCACCACCTCCTTTTATTC+AGG | + | chr7_2:2802544-2802563 | Msa1044460:intron | 40.0% |
| GAACCAACCTGAATAAAAGG+AGG | - | chr7_2:2802554-2802573 | None:intergenic | 40.0% | |
| TTGAAACCTGACACTATAGG+TGG | + | chr7_2:2802575-2802594 | Msa1044460:CDS | 40.0% | |
| ATCAGCTGTTCGATAAGTAG+TGG | - | chr7_2:2802746-2802765 | None:intergenic | 40.0% | |
| ACTACTTATCGAACAGCTGA+TGG | + | chr7_2:2802745-2802764 | Msa1044460:CDS | 40.0% | |
| TAAAAGACCAAACTTCGACC+TGG | - | chr7_2:2802958-2802977 | None:intergenic | 40.0% | |
| TGTTATGGATGTGCATCAAC+CGG | + | chr7_2:2803055-2803074 | Msa1044460:intron | 40.0% | |
| TGGCCCATATAAAAAAGGAC+CGG | - | chr7_2:2803101-2803120 | None:intergenic | 40.0% | |
| ! | TTTTTGCCCAAAAGCCCATT+TGG | - | chr7_2:2803121-2803140 | None:intergenic | 40.0% |
| !!! | ATAGGCCATATTTTTGGGCT+GGG | - | chr7_2:2803185-2803204 | None:intergenic | 40.0% |
| !!! | TTTTTTTGCCCAAGCCCATT+TGG | - | chr7_2:2803501-2803520 | None:intergenic | 40.0% |
| GGAAGTAGAGCTGTCAAAAA+TGG | - | chr7_2:2803572-2803591 | None:intergenic | 40.0% | |
| !! | TCGTAGAACCGTAATGGATA+AGG | - | chr7_2:2803663-2803682 | None:intergenic | 40.0% |
| CAACACAAATAGATGTCTGC+AGG | - | chr7_2:2803692-2803711 | None:intergenic | 40.0% | |
| TGCAGCAATAATACGCTGTT+CGG | - | chr7_2:2803903-2803922 | None:intergenic | 40.0% | |
| TGCAAAGAAAACAGCCTTTG+TGG | + | chr7_2:2803949-2803968 | Msa1044460:CDS | 40.0% | |
| GAAATCATGCTCAACCACAA+AGG | - | chr7_2:2803966-2803985 | None:intergenic | 40.0% | |
| GGTTGAGCATGATTTCATCA+TGG | + | chr7_2:2803970-2803989 | Msa1044460:CDS | 40.0% | |
| !! | GAACCAAGTTTGTTGATCCT+TGG | - | chr7_2:2804283-2804302 | None:intergenic | 40.0% |
| CAACAAACTTGGTTCAACCA+AGG | + | chr7_2:2804288-2804307 | Msa1044460:CDS | 40.0% | |
| ! | AAGCTTTTGCTCTCTATCCT+TGG | - | chr7_2:2804308-2804327 | None:intergenic | 40.0% |
| ! | ATAGAGAGCAAAAGCTTGCT+GGG | + | chr7_2:2804311-2804330 | Msa1044460:CDS | 40.0% |
| ! | TTACCTTGATGACTGAGTTC+AGG | + | chr7_2:2804501-2804520 | Msa1044460:intron | 40.0% |
| AAACCTGAACTCAGTCATCA+AGG | - | chr7_2:2804507-2804526 | None:intergenic | 40.0% | |
| CTCTTGGAACACTTTGCTTT+CGG | + | chr7_2:2804554-2804573 | Msa1044460:intron | 40.0% | |
| TCTTGGAACACTTTGCTTTC+GGG | + | chr7_2:2804555-2804574 | Msa1044460:intron | 40.0% | |
| ATGGCTTCAACAGGGAAAAA+AGG | - | chr7_2:2804688-2804707 | None:intergenic | 40.0% | |
| TGAGAAAGATGGCTTCAACA+GGG | - | chr7_2:2804696-2804715 | None:intergenic | 40.0% | |
| TTGAGAAAGATGGCTTCAAC+AGG | - | chr7_2:2804697-2804716 | None:intergenic | 40.0% | |
| GTTGAAGCCATCTTTCTCAA+TGG | + | chr7_2:2804697-2804716 | Msa1044460:CDS | 40.0% | |
| ATACTTAGCGATGTTGCTCA+TGG | + | chr7_2:2804785-2804804 | Msa1044460:CDS | 40.0% | |
| !! | GGCCAGTTTTGGTATGATTT+CGG | + | chr7_2:2804806-2804825 | Msa1044460:CDS | 40.0% |
| GTGGCATCATTATTCAGTCA+AGG | - | chr7_2:2804888-2804907 | None:intergenic | 40.0% | |
| AGAGGACGGTGAAACTAGAA+AGG | - | chr7_2:2799159-2799178 | None:intergenic | 45.0% | |
| CACAATCAAAAAGCCGATCG+GGG | - | chr7_2:2799206-2799225 | None:intergenic | 45.0% | |
| ACGCGTATTGCCATTGTCAA+TGG | + | chr7_2:2799485-2799504 | Msa1044460:CDS | 45.0% | |
| GCATCTGTCTCCATTGACAA+TGG | - | chr7_2:2799498-2799517 | None:intergenic | 45.0% | |
| ! | CAAGCCAAAAAAGTGTGGAC+AGG | + | chr7_2:2799517-2799536 | Msa1044460:CDS | 45.0% |
| !!! | CACTCCTGTCCACACTTTTT+TGG | - | chr7_2:2799524-2799543 | None:intergenic | 45.0% |
| ! | TCATACCGGTTATGACGACA+GGG | - | chr7_2:2799559-2799578 | None:intergenic | 45.0% |
| ! | ATCATACCGGTTATGACGAC+AGG | - | chr7_2:2799560-2799579 | None:intergenic | 45.0% |
| GAAGATTGCTTACCTATCCG+AGG | + | chr7_2:2799706-2799725 | Msa1044460:CDS | 45.0% | |
| ACATCCAGTGCACAATTCCT+CGG | - | chr7_2:2799726-2799745 | None:intergenic | 45.0% | |
| !! | GGAAAGTGCTTGGTTTGGTT+GGG | + | chr7_2:2800087-2800106 | Msa1044460:CDS | 45.0% |
| ! | GTCCACTGCCCTTAGAATTT+TGG | + | chr7_2:2800127-2800146 | Msa1044460:CDS | 45.0% |
| ! | AGCCAAAATTCTAAGGGCAG+TGG | - | chr7_2:2800132-2800151 | None:intergenic | 45.0% |
| !! | ACTGCCCTTAGAATTTTGGC+TGG | + | chr7_2:2800131-2800150 | Msa1044460:CDS | 45.0% |
| AAACATGTCTGTCCACTCCA+CGG | - | chr7_2:2800226-2800245 | None:intergenic | 45.0% | |
| ! | ACTGCATTCACCTCTGCTTT+TGG | + | chr7_2:2800254-2800273 | Msa1044460:intron | 45.0% |
| GTTCTGCAAACCAAAAGCAG+AGG | - | chr7_2:2800267-2800286 | None:intergenic | 45.0% | |
| AAATTTCCTGCCAGTCAGGA+GGG | - | chr7_2:2800289-2800308 | None:intergenic | 45.0% | |
| AAAATTTCCTGCCAGTCAGG+AGG | - | chr7_2:2800290-2800309 | None:intergenic | 45.0% | |
| GTCAAAATTTCCTGCCAGTC+AGG | - | chr7_2:2800293-2800312 | None:intergenic | 45.0% | |
| ACATTAGCTGGGGTATGTTG+TGG | + | chr7_2:2800734-2800753 | Msa1044460:intron | 45.0% | |
| GGGTATGTTGTGGTTGTGAT+TGG | + | chr7_2:2800744-2800763 | Msa1044460:intron | 45.0% | |
| CACATTCATAAAACGGGGCA+AGG | + | chr7_2:2801261-2801280 | Msa1044460:CDS | 45.0% | |
| CAACAGCAATGGCAAACCTT+TGG | - | chr7_2:2801407-2801426 | None:intergenic | 45.0% | |
| TAGCAATGACCGGACAACTT+GGG | - | chr7_2:2801508-2801527 | None:intergenic | 45.0% | |
| TTAGCAATGACCGGACAACT+TGG | - | chr7_2:2801509-2801528 | None:intergenic | 45.0% | |
| AAGTTGTCCGGTCATTGCTA+AGG | + | chr7_2:2801508-2801527 | Msa1044460:CDS | 45.0% | |
| ! | TGCTGTTTGTATGGAACACC+TGG | + | chr7_2:2801713-2801732 | Msa1044460:CDS | 45.0% |
| TATGGAACACCTGGTGCATA+TGG | + | chr7_2:2801722-2801741 | Msa1044460:CDS | 45.0% | |
| CTTCCTTTCTCAGTCAGAGA+AGG | + | chr7_2:2801755-2801774 | Msa1044460:CDS | 45.0% | |
| GGATGACTCTCTTACCTTCA+AGG | + | chr7_2:2801829-2801848 | Msa1044460:CDS | 45.0% | |
| ATCAATCTCAGCGCCCAAAT+TGG | - | chr7_2:2801898-2801917 | None:intergenic | 45.0% | |
| TGAGCTTCAGCAGTTTCATG+TGG | - | chr7_2:2802311-2802330 | None:intergenic | 45.0% | |
| !! | CCTTGAGTTTTGGTCATGGT+TGG | - | chr7_2:2802356-2802375 | None:intergenic | 45.0% |
| CCAACCATGACCAAAACTCA+AGG | + | chr7_2:2802353-2802372 | Msa1044460:CDS | 45.0% | |
| !! | CTTGCCTTGAGTTTTGGTCA+TGG | - | chr7_2:2802360-2802379 | None:intergenic | 45.0% |
| ! | CCTGAACTTGCCTTGAGTTT+TGG | - | chr7_2:2802366-2802385 | None:intergenic | 45.0% |
| CCAAAACTCAAGGCAAGTTC+AGG | + | chr7_2:2802363-2802382 | Msa1044460:CDS | 45.0% | |
| AAGTTCAGGCTTCGTGTAGT+TGG | + | chr7_2:2802377-2802396 | Msa1044460:CDS | 45.0% | |
| ! | TATGCTTGGTGAGAATGGGA+CGG | + | chr7_2:2802430-2802449 | Msa1044460:CDS | 45.0% |
| GACAACATTCATCCGTATGC+TGG | + | chr7_2:2802457-2802476 | Msa1044460:CDS | 45.0% | |
| CCAACCTGAATAAAAGGAGG+TGG | - | chr7_2:2802551-2802570 | None:intergenic | 45.0% | |
| ! | CCACCTCCTTTTATTCAGGT+TGG | + | chr7_2:2802548-2802567 | Msa1044460:intron | 45.0% |
| TCAGATCCACCTATAGTGTC+AGG | - | chr7_2:2802584-2802603 | None:intergenic | 45.0% | |
| CACTATAGGTGGATCTGATG+TGG | + | chr7_2:2802586-2802605 | Msa1044460:CDS | 45.0% | |
| CAGGGCAGACACTAGAATTA+AGG | - | chr7_2:2802885-2802904 | None:intergenic | 45.0% | |
| CAAACTTCGACCTGGCATAA+AGG | - | chr7_2:2802950-2802969 | None:intergenic | 45.0% | |
| CTTTATGCCAGGTCGAAGTT+TGG | + | chr7_2:2802948-2802967 | Msa1044460:intron | 45.0% | |
| !!! | GGCCCGGTCCTTTTTTATAT+GGG | + | chr7_2:2803095-2803114 | Msa1044460:intron | 45.0% |
| GGCCCATATAAAAAAGGACC+GGG | - | chr7_2:2803100-2803119 | None:intergenic | 45.0% | |
| !! | ATATGGGCCAAATGGGCTTT+TGG | + | chr7_2:2803111-2803130 | Msa1044460:intron | 45.0% |
| !! | TATGGGCCAAATGGGCTTTT+GGG | + | chr7_2:2803112-2803131 | Msa1044460:intron | 45.0% |
| !!! | GGGCTAGTTTTTTTAGGTCC+CGG | + | chr7_2:2803159-2803178 | Msa1044460:intron | 45.0% |
| !!! | GATAGGCCATATTTTTGGGC+TGG | - | chr7_2:2803186-2803205 | None:intergenic | 45.0% |
| !!! | GGGCTAGTTTTTTTAGGTCC+CGG | + | chr7_2:2803159-2803178 | Msa1044460:intron | 45.0% |
| CTACTGTCGTAGAACCGTAA+TGG | - | chr7_2:2803669-2803688 | None:intergenic | 45.0% | |
| AAAGACACAACGAAGCCAAG+AGG | - | chr7_2:2803743-2803762 | None:intergenic | 45.0% | |
| TAAATGTCTGCAGGCTGTTG+TGG | - | chr7_2:2803848-2803867 | None:intergenic | 45.0% | |
| TCGGAATCAAGATGTGCACT+TGG | - | chr7_2:2803884-2803903 | None:intergenic | 45.0% | |
| ATCCAACTAATTTCCGCCCA+AGG | + | chr7_2:2804263-2804282 | Msa1044460:CDS | 45.0% | |
| ATCCTTGGGCGGAAATTAGT+TGG | - | chr7_2:2804268-2804287 | None:intergenic | 45.0% | |
| !! | CAAGTTTGTTGATCCTTGGG+CGG | - | chr7_2:2804279-2804298 | None:intergenic | 45.0% |
| GATAGAGAGCAAAAGCTTGC+TGG | + | chr7_2:2804310-2804329 | Msa1044460:CDS | 45.0% | |
| ! | TGTTGCATTGGCAAAAGAGC+AGG | - | chr7_2:2804450-2804469 | None:intergenic | 45.0% |
| CTTGGAACACTTTGCTTTCG+GGG | + | chr7_2:2804556-2804575 | Msa1044460:intron | 45.0% | |
| ! | TGTTGCATTGGCAAAAGAGC+AGG | - | chr7_2:2804450-2804469 | None:intergenic | 45.0% |
| GCTACATGCAGAGCATATGT+TGG | + | chr7_2:2804736-2804755 | Msa1044460:CDS | 45.0% | |
| CATGCAGAGCATATGTTGGT+TGG | + | chr7_2:2804740-2804759 | Msa1044460:CDS | 45.0% | |
| ! | ATGTTGCTCATGGCCAGTTT+TGG | + | chr7_2:2804795-2804814 | Msa1044460:CDS | 45.0% |
| GGCCGAAATCATACCAAAAC+TGG | - | chr7_2:2804811-2804830 | None:intergenic | 45.0% | |
| !!! | AATTTTTTTTTTTTACAAAT+TGG | + | chr7_2:2800486-2800505 | Msa1044460:intron | 5.0% |
| !!! | TTCAATTATTTTAAAAATAA+TGG | - | chr7_2:2804129-2804148 | None:intergenic | 5.0% |
| ! | ACTAGAAAGGTGTGCCTTGC+CGG | - | chr7_2:2799146-2799165 | None:intergenic | 50.0% |
| CGGTGAATAGAGAGAGAGGA+CGG | - | chr7_2:2799173-2799192 | None:intergenic | 50.0% | |
| CTGTCGGTGAATAGAGAGAG+AGG | - | chr7_2:2799177-2799196 | None:intergenic | 50.0% | |
| CTCTCTCTCTATTCACCGAC+AGG | + | chr7_2:2799175-2799194 | Msa1044460:five_prime_UTR | 50.0% | |
| CAGTGCACAATTCCTCGGAT+AGG | - | chr7_2:2799721-2799740 | None:intergenic | 50.0% | |
| CTATCCGAGGAATTGTGCAC+TGG | + | chr7_2:2799719-2799738 | Msa1044460:CDS | 50.0% | |
| GAGGAATTGTGCACTGGATG+TGG | + | chr7_2:2799725-2799744 | Msa1044460:CDS | 50.0% | |
| !! | ATTATAGGTTGCCGGTTCCG+AGG | + | chr7_2:2800060-2800079 | Msa1044460:intron | 50.0% |
| ACCAAACCAAGCACTTTCCC+CGG | - | chr7_2:2800086-2800105 | None:intergenic | 50.0% | |
| !! | GGGAAAGTGCTTGGTTTGGT+TGG | + | chr7_2:2800086-2800105 | Msa1044460:CDS | 50.0% |
| GGAGTGGACAGACATGTTTG+AGG | + | chr7_2:2800227-2800246 | Msa1044460:intron | 50.0% | |
| TGAAAGCTGCCCAAGTTGTC+CGG | + | chr7_2:2801496-2801515 | Msa1044460:CDS | 50.0% | |
| GTTACGACTCCATATGCACC+AGG | - | chr7_2:2801734-2801753 | None:intergenic | 50.0% | |
| TTCAGGCTTCGTGTAGTTGG+AGG | + | chr7_2:2802380-2802399 | Msa1044460:CDS | 50.0% | |
| ! | ATGCTTGGTGAGAATGGGAC+GGG | + | chr7_2:2802431-2802450 | Msa1044460:CDS | 50.0% |
| !!! | CGGCCCGGTCCTTTTTTATA+TGG | + | chr7_2:2803094-2803113 | Msa1044460:intron | 50.0% |
| CTGTCAAAAATGGGCCAGCT+GGG | - | chr7_2:2803562-2803581 | None:intergenic | 50.0% | |
| CGCCCAAGGATCAACAAACT+TGG | + | chr7_2:2804277-2804296 | Msa1044460:CDS | 50.0% | |
| GCAATCGCAAGGAGAGTGGA+GGG | - | chr7_2:2799104-2799123 | None:intergenic | 55.0% | |
| CGTTGCCCTGTCGTCATAAC+CGG | + | chr7_2:2799551-2799570 | Msa1044460:CDS | 55.0% | |
| !! | ACAGGTGCGCCTTTTAGCTG+TGG | + | chr7_2:2799959-2799978 | Msa1044460:intron | 55.0% |
| GTTTGCAGAACCCTCCTGAC+TGG | + | chr7_2:2800276-2800295 | Msa1044460:intron | 55.0% | |
| TAAAACGGGGCAAGGGAACG+TGG | + | chr7_2:2801269-2801288 | Msa1044460:CDS | 55.0% | |
| AAAACGGGGCAAGGGAACGT+GGG | + | chr7_2:2801270-2801289 | Msa1044460:CDS | 55.0% | |
| TTTCAGGGGGTGAGCTCCAA+AGG | + | chr7_2:2801388-2801407 | Msa1044460:CDS | 55.0% | |
| TAGGAGGGCAGCAACAGCAA+TGG | - | chr7_2:2801418-2801437 | None:intergenic | 55.0% | |
| !! | GGGCGCTGAGATTGATTGAG+TGG | + | chr7_2:2801902-2801921 | Msa1044460:intron | 55.0% |
| !!! | CCATATTTTTGGGCTGGGCC+GGG | - | chr7_2:2803180-2803199 | None:intergenic | 55.0% |
| !!! | GCCATATTTTTGGGCTGGGC+CGG | - | chr7_2:2803181-2803200 | None:intergenic | 55.0% |
| GCTGTCAAAAATGGGCCAGC+TGG | - | chr7_2:2803563-2803582 | None:intergenic | 55.0% | |
| CGCAATCGCAAGGAGAGTGG+AGG | - | chr7_2:2799105-2799124 | None:intergenic | 60.0% | |
| ! | AAAGGTGTGCCTTGCCGGAC+GGG | - | chr7_2:2799141-2799160 | None:intergenic | 60.0% |
| ! | GAAAGGTGTGCCTTGCCGGA+CGG | - | chr7_2:2799142-2799161 | None:intergenic | 60.0% |
| !! | GCCGGGGAAAGTGCTTGGTT+TGG | + | chr7_2:2800082-2800101 | Msa1044460:CDS | 60.0% |
| AAACGGGGCAAGGGAACGTG+GGG | + | chr7_2:2801271-2801290 | Msa1044460:CDS | 60.0% | |
| CCCGGCCCAGCCCAAAAATA+TGG | + | chr7_2:2803177-2803196 | Msa1044460:intron | 60.0% | |
| CCCATTTGGCCTGGCTCATC+GGG | - | chr7_2:2803487-2803506 | None:intergenic | 60.0% | |
| CCCGATGAGCCAGGCCAAAT+GGG | + | chr7_2:2803484-2803503 | Msa1044460:intron | 60.0% | |
| GCCCATTTGGCCTGGCTCAT+CGG | - | chr7_2:2803488-2803507 | None:intergenic | 60.0% | |
| ! | TGAGCCAGGCCAAATGGGCT+TGG | + | chr7_2:2803489-2803508 | Msa1044460:intron | 60.0% |
| ! | GAGCCAGGCCAAATGGGCTT+GGG | + | chr7_2:2803490-2803509 | Msa1044460:intron | 60.0% |
| TTGCCCAAGCCCATTTGGCC+TGG | - | chr7_2:2803496-2803515 | None:intergenic | 60.0% | |
| !!! | TTTTTAGGTCCCGGCCCAGC+TGG | + | chr7_2:2803168-2803187 | Msa1044460:intron | 60.0% |
| AAAAATGGGCCAGCTGGGCC+GGG | - | chr7_2:2803557-2803576 | None:intergenic | 60.0% | |
| CAAAAATGGGCCAGCTGGGC+CGG | - | chr7_2:2803558-2803577 | None:intergenic | 60.0% | |
| CGGCGCAATCGCAAGGAGAG+TGG | - | chr7_2:2799108-2799127 | None:intergenic | 65.0% | |
| TGTGCCTTGCCGGACGGGAA+AGG | - | chr7_2:2799136-2799155 | None:intergenic | 65.0% | |
| CCGATCGGGGAGAGACCTGT+CGG | - | chr7_2:2799193-2799212 | None:intergenic | 65.0% | |
| CCGACAGGTCTCTCCCCGAT+CGG | + | chr7_2:2799190-2799209 | Msa1044460:intron | 65.0% | |
| !! | TAGGTTGCCGGTTCCGAGGC+CGG | + | chr7_2:2800064-2800083 | Msa1044460:intron | 65.0% |
| ACTTTCCCCGGCCTCGGAAC+CGG | - | chr7_2:2800074-2800093 | None:intergenic | 65.0% | |
| CCAAGCACTTTCCCCGGCCT+CGG | - | chr7_2:2800080-2800099 | None:intergenic | 65.0% | |
| GCAGAACCCTCCTGACTGGC+AGG | + | chr7_2:2800280-2800299 | Msa1044460:intron | 65.0% | |
| TGGCCTGGCTCATCGGGCTT+CGG | - | chr7_2:2803481-2803500 | None:intergenic | 65.0% | |
| GCCCGATGAGCCAGGCCAAA+TGG | + | chr7_2:2803483-2803502 | Msa1044460:intron | 65.0% | |
| GGTGCGACGGCGCAATCGCA+AGG | - | chr7_2:2799115-2799134 | None:intergenic | 70.0% | |
| GCCGTCGCACCTTTCCCGTC+CGG | + | chr7_2:2799124-2799143 | Msa1044460:five_prime_UTR | 70.0% | |
| ! | GCCGGACGGGAAAGGTGCGA+CGG | - | chr7_2:2799128-2799147 | None:intergenic | 70.0% |
| CGCACCTTTCCCGTCCGGCA+AGG | + | chr7_2:2799129-2799148 | Msa1044460:five_prime_UTR | 70.0% | |
| !! | AGGTTGCCGGTTCCGAGGCC+GGG | + | chr7_2:2800065-2800084 | Msa1044460:intron | 70.0% |
| !! | CCGAGGCCGGGGAAAGTGCT+TGG | + | chr7_2:2800077-2800096 | Msa1044460:CDS | 70.0% |
| TGGCTCATCGGGCTTCGGGC+CGG | - | chr7_2:2803476-2803495 | None:intergenic | 70.0% | |
| GGCCTGGCTCATCGGGCTTC+GGG | - | chr7_2:2803480-2803499 | None:intergenic | 70.0% | |
| !! | GGTTGCCGGTTCCGAGGCCG+GGG | + | chr7_2:2800066-2800085 | Msa1044460:intron | 75.0% |
| GGCCCGAAGCCCGATGAGCC+AGG | + | chr7_2:2803475-2803494 | Msa1044460:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 2799078 | 2804970 | 2799078 | ID=Msa1044460;Name=Msa1044460 |
| chr7_2 | mRNA | 2799078 | 2804970 | 2799078 | ID=Msa1044460-mRNA-1;Parent=Msa1044460;Name=Msa1044460-mRNA-1;_AED=0.10;_eAED=0.11;_QI=144|0.84|0.85|1|0.69|0.64|14|135|700 |
| chr7_2 | exon | 2799078 | 2799196 | 2799078 | ID=Msa1044460-mRNA-1:exon:736;Parent=Msa1044460-mRNA-1 |
| chr7_2 | exon | 2799457 | 2799572 | 2799457 | ID=Msa1044460-mRNA-1:exon:737;Parent=Msa1044460-mRNA-1 |
| chr7_2 | exon | 2799675 | 2799760 | 2799675 | ID=Msa1044460-mRNA-1:exon:738;Parent=Msa1044460-mRNA-1 |
| chr7_2 | exon | 2799865 | 2799962 | 2799865 | ID=Msa1044460-mRNA-1:exon:739;Parent=Msa1044460-mRNA-1 |
| chr7_2 | exon | 2800067 | 2800184 | 2800067 | ID=Msa1044460-mRNA-1:exon:740;Parent=Msa1044460-mRNA-1 |
| chr7_2 | exon | 2800284 | 2800373 | 2800284 | ID=Msa1044460-mRNA-1:exon:741;Parent=Msa1044460-mRNA-1 |
| chr7_2 | exon | 2801234 | 2801538 | 2801234 | ID=Msa1044460-mRNA-1:exon:742;Parent=Msa1044460-mRNA-1 |
| chr7_2 | exon | 2801655 | 2801850 | 2801655 | ID=Msa1044460-mRNA-1:exon:743;Parent=Msa1044460-mRNA-1 |
| chr7_2 | exon | 2802296 | 2802478 | 2802296 | ID=Msa1044460-mRNA-1:exon:744;Parent=Msa1044460-mRNA-1 |
| chr7_2 | exon | 2802566 | 2802835 | 2802566 | ID=Msa1044460-mRNA-1:exon:745;Parent=Msa1044460-mRNA-1 |
| chr7_2 | exon | 2803854 | 2804122 | 2803854 | ID=Msa1044460-mRNA-1:exon:746;Parent=Msa1044460-mRNA-1 |
| chr7_2 | exon | 2804238 | 2804363 | 2804238 | ID=Msa1044460-mRNA-1:exon:747;Parent=Msa1044460-mRNA-1 |
| chr7_2 | exon | 2804447 | 2804495 | 2804447 | ID=Msa1044460-mRNA-1:exon:748;Parent=Msa1044460-mRNA-1 |
| chr7_2 | exon | 2804614 | 2804970 | 2804614 | ID=Msa1044460-mRNA-1:exon:749;Parent=Msa1044460-mRNA-1 |
| chr7_2 | five_prime_UTR | 2799078 | 2799196 | 2799078 | ID=Msa1044460-mRNA-1:five_prime_utr;Parent=Msa1044460-mRNA-1 |
| chr7_2 | five_prime_UTR | 2799457 | 2799481 | 2799457 | ID=Msa1044460-mRNA-1:five_prime_utr;Parent=Msa1044460-mRNA-1 |
| chr7_2 | CDS | 2799482 | 2799572 | 2799482 | ID=Msa1044460-mRNA-1:cds;Parent=Msa1044460-mRNA-1 |
| chr7_2 | CDS | 2799675 | 2799760 | 2799675 | ID=Msa1044460-mRNA-1:cds;Parent=Msa1044460-mRNA-1 |
| chr7_2 | CDS | 2799865 | 2799962 | 2799865 | ID=Msa1044460-mRNA-1:cds;Parent=Msa1044460-mRNA-1 |
| chr7_2 | CDS | 2800067 | 2800184 | 2800067 | ID=Msa1044460-mRNA-1:cds;Parent=Msa1044460-mRNA-1 |
| chr7_2 | CDS | 2800284 | 2800373 | 2800284 | ID=Msa1044460-mRNA-1:cds;Parent=Msa1044460-mRNA-1 |
| chr7_2 | CDS | 2801234 | 2801538 | 2801234 | ID=Msa1044460-mRNA-1:cds;Parent=Msa1044460-mRNA-1 |
| chr7_2 | CDS | 2801655 | 2801850 | 2801655 | ID=Msa1044460-mRNA-1:cds;Parent=Msa1044460-mRNA-1 |
| chr7_2 | CDS | 2802296 | 2802478 | 2802296 | ID=Msa1044460-mRNA-1:cds;Parent=Msa1044460-mRNA-1 |
| chr7_2 | CDS | 2802566 | 2802835 | 2802566 | ID=Msa1044460-mRNA-1:cds;Parent=Msa1044460-mRNA-1 |
| chr7_2 | CDS | 2803854 | 2804122 | 2803854 | ID=Msa1044460-mRNA-1:cds;Parent=Msa1044460-mRNA-1 |
| chr7_2 | CDS | 2804238 | 2804363 | 2804238 | ID=Msa1044460-mRNA-1:cds;Parent=Msa1044460-mRNA-1 |
| chr7_2 | CDS | 2804447 | 2804495 | 2804447 | ID=Msa1044460-mRNA-1:cds;Parent=Msa1044460-mRNA-1 |
| chr7_2 | CDS | 2804614 | 2804835 | 2804614 | ID=Msa1044460-mRNA-1:cds;Parent=Msa1044460-mRNA-1 |
| chr7_2 | three_prime_UTR | 2804836 | 2804970 | 2804836 | ID=Msa1044460-mRNA-1:three_prime_utr;Parent=Msa1044460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
