AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1295480


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1295480 MtrunA17_Chr8g0372991 99.200 375 2 1 1 375 1 374 0.0 764
Msa1295480 MtrunA17_Chr1g0188361 35.260 346 183 12 46 366 61 390 1.35e-52 179
Msa1295480 MtrunA17_Chr5g0423381 34.314 306 167 8 85 370 59 350 5.79e-49 168
Msa1295480 MtrunA17_Chr4g0018641 33.216 283 172 8 85 363 404 673 5.97e-39 147
Msa1295480 MtrunA17_Chr3g0090521 28.610 374 208 12 46 372 95 456 6.65e-32 125
Msa1295480 MtrunA17_Chr5g0419131 25.874 286 175 8 95 371 24 281 1.50e-18 85.1
Msa1295480 MtrunA17_Chr4g0043161 38.793 116 68 3 95 207 68 183 1.71e-15 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1295480 AT4G36530.2 69.231 364 108 2 2 364 3 363 0.0 535
Msa1295480 AT4G36530.1 75.658 304 74 0 61 364 3 306 0.0 505
Msa1295480 AT5G19850.1 34.513 339 179 11 41 364 47 357 4.12e-54 182
Msa1295480 AT5G38520.1 33.609 363 211 13 25 367 8 360 4.32e-46 161
Msa1295480 AT5G38520.2 32.800 375 210 13 25 367 8 372 1.65e-45 160
Msa1295480 AT4G25290.1 34.333 300 176 9 73 367 388 671 1.31e-40 152
Msa1295480 AT5G13800.2 27.735 393 212 11 39 366 29 414 1.74e-35 135
Msa1295480 AT5G13800.1 27.735 393 212 11 39 366 29 414 1.74e-35 135
Msa1295480 AT5G13800.3 27.735 393 212 11 39 366 52 437 2.39e-35 135
Msa1295480 AT5G13800.4 27.559 381 204 11 39 354 29 402 2.16e-33 129
Msa1295480 AT1G13820.1 24.823 282 167 8 95 363 77 326 2.93e-15 76.6
Msa1295480 AT4G12830.1 27.407 270 157 12 99 353 132 377 1.35e-12 68.9

Find 114 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACCTTGTTTATGGTTTA+AGG 0.128329 8_3:+53651802 None:intergenic
TTCAGACCAAACCTTGTTTA+TGG 0.157165 8_3:+53651795 None:intergenic
TTGTGTTTCTTGGCCAATTC+TGG 0.173357 8_3:+53649826 None:intergenic
ACTTGTGAACTCGGCTTTAT+TGG 0.198322 8_3:-53647709 Msa1295480:CDS
CCTCCTCTTGTTCTTATTCA+TGG 0.200309 8_3:-53650906 Msa1295480:CDS
GCCTTAGACTTGCTTGGATT+TGG 0.217148 8_3:-53649796 Msa1295480:CDS
GGCATAAACCTTGTGTTTCT+TGG 0.217796 8_3:+53649816 None:intergenic
CTGAATTCTGCAGGACAATT+TGG 0.233804 8_3:-53649227 Msa1295480:CDS
AAGCAGAAGGGTACAATTAT+TGG 0.274374 8_3:-53650974 Msa1295480:CDS
CTTGTTCTTATTCATGGTTT+TGG 0.276536 8_3:-53650900 Msa1295480:CDS
CCTTAGACTTGCTTGGATTT+GGG 0.287622 8_3:-53649795 Msa1295480:CDS
TGGTTCTTGGATTTATATTC+TGG 0.289323 8_3:-53649118 Msa1295480:CDS
GGAGAGAGACTTTAGGAGTA+AGG 0.306647 8_3:+53647673 None:intergenic
ACAATTTGGTGATGGAAATA+AGG 0.310953 8_3:-53649213 Msa1295480:CDS
TTTAAAGGAATTATGGCAAC+TGG 0.337404 8_3:-53651510 Msa1295480:CDS
GGCAACTGGGGTTTCAGTTA+TGG 0.340617 8_3:-53651496 Msa1295480:CDS
TGTTAAAGAACCAGCAGTTT+TGG 0.341015 8_3:-53649698 Msa1295480:CDS
CCCAAATCCAAGCAAGTCTA+AGG 0.342040 8_3:+53649795 None:intergenic
TATACAATGTTCAAACTGTT+TGG 0.342917 8_3:+53647652 None:intergenic
ACTGCTTTGATTGCAGCAGC+TGG 0.361467 8_3:-53649281 Msa1295480:CDS
TAATAAACTTCTCCGGCATT+GGG 0.368100 8_3:+53648368 None:intergenic
CAGATACAATATTCCAGAAT+TGG 0.369584 8_3:-53649839 Msa1295480:CDS
ATGCCGGAGAAGTTTATTAC+AGG 0.380848 8_3:-53648364 Msa1295480:intron
TTCTATTTGCTAATGTTTGA+AGG 0.388850 8_3:+53647390 None:intergenic
TTGCCCGTTGCTTCTGCTAT+GGG 0.392151 8_3:-53647847 Msa1295480:CDS
GTAATAAACTTCTCCGGCAT+TGG 0.392291 8_3:+53648367 None:intergenic
AACAAGAAGGTGGTTTGTTT+TGG 0.394802 8_3:+53651675 None:intergenic
TACACTCTTGATTCTGTGTT+AGG 0.401014 8_3:-53647879 Msa1295480:CDS
TTCCCAAGTTTCCGTGTCAA+TGG 0.402365 8_3:-53651743 Msa1295480:exon
CTTGCCCGTTGCTTCTGCTA+TGG 0.404860 8_3:-53647848 Msa1295480:CDS
CTTAAACCATAAACAAGGTT+TGG 0.407061 8_3:-53651801 Msa1295480:five_prime_UTR
TGAACTCGGCTTTATTGGAT+TGG 0.414109 8_3:-53647704 Msa1295480:CDS
GGGTTGCCTGAGTCTGTCAC+GGG 0.422313 8_3:-53649260 Msa1295480:CDS
CGCTGGAAAACTTCCTTCAA+AGG 0.424959 8_3:+53649143 None:intergenic
GTTTATGCCTTAGACTTGCT+TGG 0.426438 8_3:-53649802 Msa1295480:CDS
AAGCCATTGACACGGAAACT+TGG 0.428335 8_3:+53651740 None:intergenic
ACTGTTTGGAGAGAGACTTT+AGG 0.439212 8_3:+53647666 None:intergenic
TTGGTGCATCTGCATTTCAC+TGG 0.442459 8_3:-53650881 Msa1295480:CDS
CTCTTGTTAACTTGCAAGCC+GGG 0.448412 8_3:-53647758 Msa1295480:CDS
AAAGCCGAGTTCACAAGTTC+CGG 0.451235 8_3:+53647714 None:intergenic
TGGGTTGCCTGAGTCTGTCA+CGG 0.467611 8_3:-53649261 Msa1295480:CDS
TTGAGCTTGTGAAGTAAGAG+AGG 0.474929 8_3:+53651470 None:intergenic
CTGCTTTGATTGCAGCAGCT+GGG 0.475704 8_3:-53649280 Msa1295480:CDS
TTGTAATCTAGGAGAAGGAG+AGG 0.478710 8_3:+53651702 None:intergenic
CTGTCGACACACATAGACTA+TGG 0.479925 8_3:-53647497 Msa1295480:three_prime_UTR
GTCATCACCATACGATGTAT+AGG 0.482797 8_3:-53647562 Msa1295480:three_prime_UTR
GAGAGAGACTTTAGGAGTAA+GGG 0.485597 8_3:+53647674 None:intergenic
AAGGGTACAATTATTGGAAG+TGG 0.485898 8_3:-53650968 Msa1295480:CDS
CTATTTCCAACCAAAACTGC+TGG 0.488138 8_3:+53649688 None:intergenic
CACTATGTTGTGCAAGGAGA+AGG 0.505318 8_3:-53650930 Msa1295480:CDS
TAGACTTGCTTGGATTTGGG+TGG 0.508081 8_3:-53649792 Msa1295480:CDS
GTGAGTTGTAATCTAGGAGA+AGG 0.508691 8_3:+53651697 None:intergenic
AAGTTCCGGTATCTCGTCGT+GGG 0.513634 8_3:+53647728 None:intergenic
TATGGGGTGACCTTGATCCA+TGG 0.514896 8_3:-53647830 Msa1295480:CDS
GTGCATCTGCATTTCACTGG+AGG 0.517866 8_3:-53650878 Msa1295480:intron
CCAGCTCAAGACCCCAATGC+CGG 0.518422 8_3:-53648380 Msa1295480:CDS
TCTGAGACAAAGGGAGTCAA+TGG 0.519226 8_3:-53651881 None:intergenic
CACCCCATAGCAGAAGCAAC+GGG 0.519583 8_3:+53647844 None:intergenic
CGGCTTTCCTATACATCGTA+TGG 0.520316 8_3:+53647555 None:intergenic
CTGGACCAACCCATGGATCA+AGG 0.525300 8_3:+53647820 None:intergenic
ACTCTTGTTAACTTGCAAGC+CGG 0.530091 8_3:-53647759 Msa1295480:CDS
GTTGTTCTACTGAATTCTGC+AGG 0.533043 8_3:-53649236 Msa1295480:CDS
GACAAAGGGAGTCAATGGCT+TGG 0.543186 8_3:-53651876 None:intergenic
ATGGGGTGACCTTGATCCAT+GGG 0.543368 8_3:-53647829 Msa1295480:CDS
GCACCTGTAATAAACTTCTC+CGG 0.546799 8_3:+53648361 None:intergenic
AGCCATTGACACGGAAACTT+GGG 0.546918 8_3:+53651741 None:intergenic
TCTGCAGGACAATTTGGTGA+TGG 0.548004 8_3:-53649221 Msa1295480:CDS
TTGAATAACTAACCTTGAGA+TGG 0.548985 8_3:+53651447 None:intergenic
GCTTTCGCTGGACCAACCCA+TGG 0.557610 8_3:+53647813 None:intergenic
GGTGACCTTGATCCATGGGT+TGG 0.562981 8_3:-53647825 Msa1295480:CDS
TTTGATTAGCTATACATACA+AGG 0.565746 8_3:+53647628 None:intergenic
TGTAATCTAGGAGAAGGAGA+GGG 0.565764 8_3:+53651703 None:intergenic
AGATTAGCATACAAAGCAGA+AGG 0.567638 8_3:-53650987 Msa1295480:CDS
ATAATGTAAGAATTGAATGC+AGG 0.568687 8_3:+53647459 None:intergenic
TTAAAGGAATTATGGCAACT+GGG 0.569469 8_3:-53651509 Msa1295480:CDS
AAAATTCACTATGTTGTGCA+AGG 0.574133 8_3:-53650936 Msa1295480:CDS
AAGACTGATTCAATCCGAGC+GGG 0.577428 8_3:+53649083 None:intergenic
AAACCATGAATAAGAACAAG+AGG 0.582877 8_3:+53650903 None:intergenic
CAAGTTCCGGTATCTCGTCG+TGG 0.584909 8_3:+53647727 None:intergenic
GATACCGGAACTTGTGAACT+CGG 0.588286 8_3:-53647718 Msa1295480:CDS
AGAGACTTTAGGAGTAAGGG+TGG 0.593616 8_3:+53647677 None:intergenic
TCAAGTCGTGGACTTCATGA+AGG 0.598557 8_3:-53649725 Msa1295480:CDS
GTACAATTATTGGAAGTGGA+AGG 0.599023 8_3:-53650964 Msa1295480:CDS
TCACCCCATAGCAGAAGCAA+CGG 0.600873 8_3:+53647843 None:intergenic
AGAGACTTACTGTGATAGAG+AGG 0.602429 8_3:+53651640 None:intergenic
CACAAGATAGTCATCCACAT+TGG 0.603615 8_3:+53648418 None:intergenic
TCACAAGCTCAACCATCTCA+AGG 0.605473 8_3:-53651459 Msa1295480:intron
TAAAGGAATTATGGCAACTG+GGG 0.607011 8_3:-53651508 Msa1295480:CDS
AGTTCCGGTATCTCGTCGTG+GGG 0.608774 8_3:+53647729 None:intergenic
CTATGATGCCATGGTGTGGA+GGG 0.613064 8_3:-53649749 Msa1295480:CDS
CCATGAATAAGAACAAGAGG+AGG 0.618576 8_3:+53650906 None:intergenic
GTAGTGAAGCTGCAACAAGA+AGG 0.621650 8_3:+53651662 None:intergenic
ACTATGATGCCATGGTGTGG+AGG 0.627349 8_3:-53649750 Msa1295480:CDS
TGCCCGTTGCTTCTGCTATG+GGG 0.629349 8_3:-53647846 Msa1295480:CDS
ACTCGTCGACTATGATGCCA+TGG 0.630961 8_3:-53649758 Msa1295480:CDS
TCGACTATGATGCCATGGTG+TGG 0.634074 8_3:-53649753 Msa1295480:CDS
TCAAAGCAGTAAATCCTCCA+AGG 0.637932 8_3:+53649294 None:intergenic
TAAATCCAAGAACCACACGC+TGG 0.640929 8_3:+53649126 None:intergenic
CAATGTGGATGACTATCTTG+TGG 0.643108 8_3:-53648417 Msa1295480:CDS
AGAATTGGCCAAGAAACACA+AGG 0.650829 8_3:-53649824 Msa1295480:CDS
TAAGGAACAGAAAACTTCAG+AGG 0.651193 8_3:-53649195 Msa1295480:CDS
AATAAACTTCTCCGGCATTG+GGG 0.651870 8_3:+53648369 None:intergenic
GTGAAGCTGCAACAAGAAGG+TGG 0.652581 8_3:+53651665 None:intergenic
GATTAGCATACAAAGCAGAA+GGG 0.664092 8_3:-53650986 Msa1295480:CDS
GACTTGATCCCTCCACACCA+TGG 0.665450 8_3:+53649741 None:intergenic
ATCTTGTGGAATCTATAACA+AGG 0.665755 8_3:-53648403 Msa1295480:CDS
ACAACCTTAAACCATAAACA+AGG 0.666980 8_3:-53651806 Msa1295480:five_prime_UTR
CATGAATAAGAACAAGAGGA+GGG 0.669208 8_3:+53650907 None:intergenic
GGTGTGGAGGGATCAAGTCG+TGG 0.671418 8_3:-53649737 Msa1295480:CDS
ATTGACACGGAAACTTGGGA+AGG 0.692044 8_3:+53651745 None:intergenic
TATACAAGAAGCCATTGACA+CGG 0.694183 8_3:+53651732 None:intergenic
TAAGACTGATTCAATCCGAG+CGG 0.726541 8_3:+53649082 None:intergenic
GTTGCCTGAGTCTGTCACGG+GGG 0.747822 8_3:-53649258 Msa1295480:CDS
GTGGTGATGAGTGAGTGTTG+TGG 0.792274 8_3:+53651847 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAAAAAATTAACTTAT+CGG + chr8_3:53649378-53649397 None:intergenic 10.0%
!!! TTTTTAATAAGTTAAAACTA+TGG - chr8_3:53649929-53649948 Msa1295480:intron 10.0%
!!! TTGTATTAGGTTTTTATATT+AGG - chr8_3:53647905-53647924 Msa1295480:CDS 15.0%
!!! TTGTGATTTTTTTTAAAACA+TGG - chr8_3:53648204-53648223 Msa1295480:intron 15.0%
!!! TGTGATTTTTTTTAAAACAT+GGG - chr8_3:53648205-53648224 Msa1295480:intron 15.0%
!! ACAATTAAGAATCATATTTA+CGG - chr8_3:53650670-53650689 Msa1295480:intron 15.0%
!!! ATTTTGCTTTTGATATTTAT+TGG - chr8_3:53651215-53651234 Msa1295480:intron 15.0%
!!! ATTTTGTTTGTTTTGTTTGA+AGG - chr8_3:53647708-53647727 Msa1295480:CDS 20.0%
!!! TTTAGCTTTTAAAGGAATTA+TGG - chr8_3:53647758-53647777 Msa1295480:CDS 20.0%
!!! TTTCTTAATTTTTTCCCTTT+CGG + chr8_3:53648484-53648503 None:intergenic 20.0%
!! TATAAACAGCACATATAAAA+GGG + chr8_3:53648543-53648562 None:intergenic 20.0%
!! ATATAAACAGCACATATAAA+AGG + chr8_3:53648544-53648563 None:intergenic 20.0%
!!! AGTTTTTGAATGTTGTTATT+TGG + chr8_3:53648966-53648985 None:intergenic 20.0%
!! AAGTTATAATATTTATCAGC+TGG + chr8_3:53649124-53649143 None:intergenic 20.0%
!! TAATAATTCGATGTAAATCT+AGG + chr8_3:53649628-53649647 None:intergenic 20.0%
!! TAGATTTACATCGAATTATT+AGG - chr8_3:53649627-53649646 Msa1295480:intron 20.0%
!! AGACTAAATTTCCAAAATTA+AGG + chr8_3:53649692-53649711 None:intergenic 20.0%
!! ACAATAATAACCAAGTAATA+TGG + chr8_3:53650489-53650508 None:intergenic 20.0%
!!! ATTTTAGATAAAAGGATAAG+AGG + chr8_3:53650633-53650652 None:intergenic 20.0%
!!! AGTTATGGATTTTAGATAAA+AGG + chr8_3:53650641-53650660 None:intergenic 20.0%
!! TAAATTGAATAGTGTTTGAT+TGG + chr8_3:53650773-53650792 None:intergenic 20.0%
!! CACTATTCAATTTACTTAAA+TGG - chr8_3:53650779-53650798 Msa1295480:intron 20.0%
!! ATATTCATTTAATGATGTTG+TGG + chr8_3:53651063-53651082 None:intergenic 20.0%
!! TGTTATAGATTTATTTCCAA+TGG + chr8_3:53651092-53651111 None:intergenic 20.0%
!! TTGGAAATAAATCTATAACA+AGG - chr8_3:53651092-53651111 Msa1295480:intron 20.0%
!! AAATATATAGTTGACTAGTA+CGG + chr8_3:53651145-53651164 None:intergenic 20.0%
!! AAGAAAAACTAAGACTTTTG+AGG + chr8_3:53647510-53647529 None:intergenic 25.0%
!!! AGAAGAAGTTTAGCTTTTAA+AGG - chr8_3:53647750-53647769 Msa1295480:CDS 25.0%
!!! TCTATCATTGATTTGAATCA+CGG - chr8_3:53647875-53647894 Msa1295480:CDS 25.0%
! ACCTTATGTTTAATCTATCT+AGG - chr8_3:53647994-53648013 Msa1295480:intron 25.0%
! TTATGTTTAATCTATCTAGG+CGG - chr8_3:53647997-53648016 Msa1295480:intron 25.0%
! ATTCTATATGCTTATATCCA+TGG - chr8_3:53648235-53648254 Msa1295480:intron 25.0%
! CTAAGCAATAAAACTAAAAG+AGG + chr8_3:53648449-53648468 None:intergenic 25.0%
! TAAATGCATATATCGAAAGA+AGG + chr8_3:53648608-53648627 None:intergenic 25.0%
! ATAACATTTGATCAAGAAAG+TGG + chr8_3:53648902-53648921 None:intergenic 25.0%
! TCTTCAAATGTTTATTACAG+TGG - chr8_3:53649338-53649357 Msa1295480:intron 25.0%
! GATTTCTTTAAATGCTTGAT+AGG - chr8_3:53650248-53650267 Msa1295480:intron 25.0%
! TGAATAAACTTTCACAGAAT+AGG - chr8_3:53650302-53650321 Msa1295480:intron 25.0%
! TAATATGGAGATTAATCCTA+GGG + chr8_3:53650474-53650493 None:intergenic 25.0%
! AATTTCGACAACAATTTAGA+TGG + chr8_3:53651180-53651199 None:intergenic 25.0%
! AGGTAGTAGTTAAAAACAAA+AGG + chr8_3:53651323-53651342 None:intergenic 25.0%
!!! AAGTTAACAAGAGTTGTTTT+TGG + chr8_3:53651510-53651529 None:intergenic 25.0%
! TATACAATGTTCAAACTGTT+TGG + chr8_3:53651626-53651645 None:intergenic 25.0%
!! TTTGATTAGCTATACATACA+AGG + chr8_3:53651650-53651669 None:intergenic 25.0%
!!! CTATCCTCAGTATTTTTAAT+CGG + chr8_3:53651743-53651762 None:intergenic 25.0%
! ATTAAAAATACTGAGGATAG+TGG - chr8_3:53651743-53651762 Msa1295480:exon 25.0%
! ATAATGTAAGAATTGAATGC+AGG + chr8_3:53651819-53651838 None:intergenic 25.0%
ACAACCTTAAACCATAAACA+AGG - chr8_3:53647469-53647488 Msa1295480:three_prime_UTR 30.0%
! CAAACCTTGTTTATGGTTTA+AGG + chr8_3:53647476-53647495 None:intergenic 30.0%
CTTAAACCATAAACAAGGTT+TGG - chr8_3:53647474-53647493 Msa1295480:three_prime_UTR 30.0%
TTTAAAGGAATTATGGCAAC+TGG - chr8_3:53647765-53647784 Msa1295480:CDS 30.0%
TTAAAGGAATTATGGCAACT+GGG - chr8_3:53647766-53647785 Msa1295480:CDS 30.0%
TTGAATAACTAACCTTGAGA+TGG + chr8_3:53647831-53647850 None:intergenic 30.0%
CACTCTTTATAAACTCTAGT+CGG - chr8_3:53647971-53647990 Msa1295480:intron 30.0%
GCCTAGATAGATTAAACATA+AGG + chr8_3:53647998-53648017 None:intergenic 30.0%
TATGTTTAATCTATCTAGGC+GGG - chr8_3:53647998-53648017 Msa1295480:intron 30.0%
GTTGTCTTGATGTATACTTT+CGG - chr8_3:53648175-53648194 Msa1295480:intron 30.0%
TCTTAAAAAGGAAAAAGCCA+TGG + chr8_3:53648255-53648274 None:intergenic 30.0%
!! GCTTTTTCCTTTTTAAGAGA+AGG - chr8_3:53648257-53648276 Msa1295480:intron 30.0%
TCAAGTTCCTTCTCTTAAAA+AGG + chr8_3:53648267-53648286 None:intergenic 30.0%
AAAATTCACTATGTTGTGCA+AGG - chr8_3:53648339-53648358 Msa1295480:intron 30.0%
AAACCATGAATAAGAACAAG+AGG + chr8_3:53648375-53648394 None:intergenic 30.0%
! CTTGTTCTTATTCATGGTTT+TGG - chr8_3:53648375-53648394 Msa1295480:CDS 30.0%
! ATTGCTGTTCAATGTTACTT+AGG + chr8_3:53648695-53648714 None:intergenic 30.0%
CGATATGTTATATTTCATGC+AGG + chr8_3:53648926-53648945 None:intergenic 30.0%
! GCTTCAAGTTTACTAAATTG+TGG + chr8_3:53649075-53649094 None:intergenic 30.0%
ACATACTAAGATTTATGCGA+AGG + chr8_3:53649151-53649170 None:intergenic 30.0%
!! CTCTTTCTTCTAAGACAAAA+AGG - chr8_3:53649275-53649294 Msa1295480:CDS 30.0%
!! CAATTCTGGAATATTGTATC+TGG + chr8_3:53649438-53649457 None:intergenic 30.0%
CAGATACAATATTCCAGAAT+TGG - chr8_3:53649436-53649455 Msa1295480:intron 30.0%
AAATTAAGGAAAACTGTGCA+TGG + chr8_3:53649678-53649697 None:intergenic 30.0%
! TGCACAGTTTTCCTTAATTT+TGG - chr8_3:53649678-53649697 Msa1295480:intron 30.0%
!! ACAATTTGGTGATGGAAATA+AGG - chr8_3:53650062-53650081 Msa1295480:intron 30.0%
! GTTTTTCCTAAAACCTTTGA+AGG - chr8_3:53650119-53650138 Msa1295480:intron 30.0%
! AAACTTCCTTCAAAGGTTTT+AGG + chr8_3:53650128-53650147 None:intergenic 30.0%
TGGTTCTTGGATTTATATTC+TGG - chr8_3:53650157-53650176 Msa1295480:intron 30.0%
! GAATCAGTCTTAAAAAGTGT+AGG - chr8_3:53650204-53650223 Msa1295480:intron 30.0%
GTTACATGATATCTTCAACT+TGG - chr8_3:53650226-53650245 Msa1295480:intron 30.0%
ATAAAATCGTCCTAACATTC+TGG + chr8_3:53650351-53650370 None:intergenic 30.0%
AATATGGAGATTAATCCTAG+GGG + chr8_3:53650473-53650492 None:intergenic 30.0%
GTAATATGGAGATTAATCCT+AGG + chr8_3:53650475-53650494 None:intergenic 30.0%
GGATTAATCTCCATATTACT+TGG - chr8_3:53650476-53650495 Msa1295480:intron 30.0%
TCTACGTGTCCTTATAAATA+GGG - chr8_3:53650549-53650568 Msa1295480:intron 30.0%
AATTGTCGAATTCGAAGTTA+TGG + chr8_3:53650656-53650675 None:intergenic 30.0%
!!! CTGCTTGTTTTTTCATTACT+AGG - chr8_3:53650742-53650761 Msa1295480:intron 30.0%
GTATAAAAACTCTTCCAATG+TGG - chr8_3:53650843-53650862 Msa1295480:intron 30.0%
ATCTTGTGGAATCTATAACA+AGG - chr8_3:53650872-53650891 Msa1295480:intron 30.0%
AAATGAATATACGTCTCCAT+TGG - chr8_3:53651073-53651092 Msa1295480:intron 30.0%
AAAGCCGATTAAAAATACTG+AGG - chr8_3:53651736-53651755 Msa1295480:exon 30.0%
!! GGTTGTTTTGTGAATTTGTG+CGG + chr8_3:53647455-53647474 None:intergenic 35.0%
! TTCAGACCAAACCTTGTTTA+TGG + chr8_3:53647483-53647502 None:intergenic 35.0%
TATACAAGAAGCCATTGACA+CGG + chr8_3:53647546-53647565 None:intergenic 35.0%
!! GTTTTGGTGAGTTGTAATCT+AGG + chr8_3:53647587-53647606 None:intergenic 35.0%
!!! AACAAGAAGGTGGTTTGTTT+TGG + chr8_3:53647603-53647622 None:intergenic 35.0%
TAAAGGAATTATGGCAACTG+GGG - chr8_3:53647767-53647786 Msa1295480:CDS 35.0%
CAATGATAGAAGTGAAAGTG+AGG + chr8_3:53647865-53647884 None:intergenic 35.0%
TCAGAGACATGAAAAACTGA+GGG - chr8_3:53648046-53648065 Msa1295480:intron 35.0%
! AACACAGTTTTTGTGTTGTC+CGG - chr8_3:53648119-53648138 Msa1295480:intron 35.0%
AGATTAGCATACAAAGCAGA+AGG - chr8_3:53648288-53648307 Msa1295480:intron 35.0%
GATTAGCATACAAAGCAGAA+GGG - chr8_3:53648289-53648308 Msa1295480:intron 35.0%
! AAGCAGAAGGGTACAATTAT+TGG - chr8_3:53648301-53648320 Msa1295480:intron 35.0%
! AAGGGTACAATTATTGGAAG+TGG - chr8_3:53648307-53648326 Msa1295480:intron 35.0%
GTACAATTATTGGAAGTGGA+AGG - chr8_3:53648311-53648330 Msa1295480:intron 35.0%
CATGAATAAGAACAAGAGGA+GGG + chr8_3:53648371-53648390 None:intergenic 35.0%
TAGTTAATGCTCAATCCGAA+AGG - chr8_3:53648466-53648485 Msa1295480:intron 35.0%
AGTTAATGCTCAATCCGAAA+GGG - chr8_3:53648467-53648486 Msa1295480:intron 35.0%
GAATTGAATACGCACAGAAT+TGG + chr8_3:53648581-53648600 None:intergenic 35.0%
TCTGATGTCTATACTCCTAA+AGG - chr8_3:53648813-53648832 Msa1295480:intron 35.0%
CTGATGTCTATACTCCTAAA+GGG - chr8_3:53648814-53648833 Msa1295480:intron 35.0%
!! ATTTGGCAATTGAGTTGACT+GGG + chr8_3:53648949-53648968 None:intergenic 35.0%
!! TATTTGGCAATTGAGTTGAC+TGG + chr8_3:53648950-53648969 None:intergenic 35.0%
!!! CTTCTCACTTTTTTCGTTGA+TGG - chr8_3:53649172-53649191 Msa1295480:CDS 35.0%
!!! ACTTTTTTCGTTGATGGCAA+AGG - chr8_3:53649178-53649197 Msa1295480:CDS 35.0%
!!! CTTTTTTCGTTGATGGCAAA+GGG - chr8_3:53649179-53649198 Msa1295480:CDS 35.0%
AGCACATTACATGCTATATC+AGG + chr8_3:53649210-53649229 None:intergenic 35.0%
! TGTTAAAGAACCAGCAGTTT+TGG - chr8_3:53649577-53649596 Msa1295480:intron 35.0%
TTTGGAAATTTAGTCTGTCG+TGG - chr8_3:53649696-53649715 Msa1295480:CDS 35.0%
GTTCAAATTTCGCTACACTA+CGG - chr8_3:53649766-53649785 Msa1295480:CDS 35.0%
! AATGAAGCGTTAACAGATAG+CGG + chr8_3:53649802-53649821 None:intergenic 35.0%
TGCATATCGCAAAACAATAG+TGG - chr8_3:53649828-53649847 Msa1295480:CDS 35.0%
TAAGGAACAGAAAACTTCAG+AGG - chr8_3:53650080-53650099 Msa1295480:intron 35.0%
ATTTGTGTCACCAGAATGTT+AGG - chr8_3:53650338-53650357 Msa1295480:intron 35.0%
AGTAGCTTAGTTTATCCCTT+GGG - chr8_3:53650414-53650433 Msa1295480:intron 35.0%
TGGTTAGAAACTAATCCCAA+GGG + chr8_3:53650432-53650451 None:intergenic 35.0%
TTGGTTAGAAACTAATCCCA+AGG + chr8_3:53650433-53650452 None:intergenic 35.0%
! GGACAATCTAAGATACTCTT+TGG + chr8_3:53650452-53650471 None:intergenic 35.0%
GTCTACGTGTCCTTATAAAT+AGG - chr8_3:53650548-53650567 Msa1295480:intron 35.0%
CTACGTGTCCTTATAAATAG+GGG - chr8_3:53650550-53650569 Msa1295480:intron 35.0%
GGACTGTTTATTTCCTTTCA+GGG - chr8_3:53650711-53650730 Msa1295480:intron 35.0%
TAATAAACTTCTCCGGCATT+GGG + chr8_3:53650910-53650929 None:intergenic 35.0%
AACATAGACAAAGACTGACT+AGG + chr8_3:53650954-53650973 None:intergenic 35.0%
TCAGTCTTTGTCTATGTTGT+CGG - chr8_3:53650956-53650975 Msa1295480:CDS 35.0%
TGAGTAATGTAGATAAGCTG+AGG - chr8_3:53651256-53651275 Msa1295480:intron 35.0%
TGCGTACTAAACAATTCTGT+TGG - chr8_3:53651286-53651305 Msa1295480:intron 35.0%
TACACTCTTGATTCTGTGTT+AGG - chr8_3:53651396-53651415 Msa1295480:intron 35.0%
!!! TTGATTTTGTTAGCTTTCGC+TGG + chr8_3:53651477-53651496 None:intergenic 35.0%
! TTTTGTGAATTTGTGCGGTG+TGG + chr8_3:53647450-53647469 None:intergenic 40.0%
TGTAATCTAGGAGAAGGAGA+GGG + chr8_3:53647575-53647594 None:intergenic 40.0%
TTGTAATCTAGGAGAAGGAG+AGG + chr8_3:53647576-53647595 None:intergenic 40.0%
GTGAGTTGTAATCTAGGAGA+AGG + chr8_3:53647581-53647600 None:intergenic 40.0%
AGAGACTTACTGTGATAGAG+AGG + chr8_3:53647638-53647657 None:intergenic 40.0%
TTGAGCTTGTGAAGTAAGAG+AGG + chr8_3:53647808-53647827 None:intergenic 40.0%
!! ACTCACAAACTGGTTCTGTA+AGG + chr8_3:53647941-53647960 None:intergenic 40.0%
! AGAACCAGTTTGTGAGTTGA+GGG - chr8_3:53647944-53647963 Msa1295480:intron 40.0%
TGTCTCTGAGTGCAACTTAT+TGG + chr8_3:53648035-53648054 None:intergenic 40.0%
CTCAGAGACATGAAAAACTG+AGG - chr8_3:53648045-53648064 Msa1295480:intron 40.0%
TGTACATCCAAACTGCTTTC+GGG + chr8_3:53648085-53648104 None:intergenic 40.0%
GTGTACATCCAAACTGCTTT+CGG + chr8_3:53648086-53648105 None:intergenic 40.0%
CCATGAATAAGAACAAGAGG+AGG + chr8_3:53648372-53648391 None:intergenic 40.0%
CCTCCTCTTGTTCTTATTCA+TGG - chr8_3:53648369-53648388 Msa1295480:CDS 40.0%
TTGTGTTTCTTGGCCAATTC+TGG + chr8_3:53649452-53649471 None:intergenic 40.0%
AGAATTGGCCAAGAAACACA+AGG - chr8_3:53649451-53649470 Msa1295480:intron 40.0%
GGCATAAACCTTGTGTTTCT+TGG + chr8_3:53649462-53649481 None:intergenic 40.0%
! GTTTATGCCTTAGACTTGCT+TGG - chr8_3:53649473-53649492 Msa1295480:intron 40.0%
! CCTTAGACTTGCTTGGATTT+GGG - chr8_3:53649480-53649499 Msa1295480:intron 40.0%
!! AAAGAACCAGCAGTTTTGGT+TGG - chr8_3:53649581-53649600 Msa1295480:intron 40.0%
CTATTTCCAACCAAAACTGC+TGG + chr8_3:53649590-53649609 None:intergenic 40.0%
!!! CAGCAGTTTTGGTTGGAAAT+AGG - chr8_3:53649588-53649607 Msa1295480:intron 40.0%
! TCATGATGACTTTTCAGCCT+TGG - chr8_3:53649964-53649983 Msa1295480:intron 40.0%
TCAAAGCAGTAAATCCTCCA+AGG + chr8_3:53649984-53650003 None:intergenic 40.0%
GTTGTTCTACTGAATTCTGC+AGG - chr8_3:53650039-53650058 Msa1295480:intron 40.0%
CTGAATTCTGCAGGACAATT+TGG - chr8_3:53650048-53650067 Msa1295480:intron 40.0%
! TAAGACTGATTCAATCCGAG+CGG + chr8_3:53650196-53650215 None:intergenic 40.0%
TTCACAGAATAGGCTCATCA+AGG - chr8_3:53650312-53650331 Msa1295480:intron 40.0%
GAGTAGCTTAGTTTATCCCT+TGG - chr8_3:53650413-53650432 Msa1295480:intron 40.0%
AGTATCTTAGATTGTCCCCT+AGG - chr8_3:53650455-53650474 Msa1295480:intron 40.0%
GTGTCCTTATAAATAGGGGT+TGG - chr8_3:53650554-53650573 Msa1295480:intron 40.0%
TCCTTATAAATAGGGGTTGG+TGG - chr8_3:53650557-53650576 Msa1295480:intron 40.0%
ACCACCAACCCCTATTTATA+AGG + chr8_3:53650561-53650580 None:intergenic 40.0%
GGGACTGTTTATTTCCTTTC+AGG - chr8_3:53650710-53650729 Msa1295480:intron 40.0%
CACAAGATAGTCATCCACAT+TGG + chr8_3:53650860-53650879 None:intergenic 40.0%
CAATGTGGATGACTATCTTG+TGG - chr8_3:53650858-53650877 Msa1295480:intron 40.0%
AATAAACTTCTCCGGCATTG+GGG + chr8_3:53650909-53650928 None:intergenic 40.0%
GTAATAAACTTCTCCGGCAT+TGG + chr8_3:53650911-53650930 None:intergenic 40.0%
ATGCCGGAGAAGTTTATTAC+AGG - chr8_3:53650911-53650930 Msa1295480:CDS 40.0%
GCACCTGTAATAAACTTCTC+CGG + chr8_3:53650917-53650936 None:intergenic 40.0%
TAGACAAAGACTGACTAGGA+CGG + chr8_3:53650950-53650969 None:intergenic 40.0%
!! GTGAGTATGACGGACATAAT+TGG + chr8_3:53651037-53651056 None:intergenic 40.0%
ATTATGTCCGTCATACTCAC+AGG - chr8_3:53651037-53651056 Msa1295480:intron 40.0%
!! ACTCTTGTTAACTTGCAAGC+CGG - chr8_3:53651516-53651535 Msa1295480:CDS 40.0%
! ACTTGTGAACTCGGCTTTAT+TGG - chr8_3:53651566-53651585 Msa1295480:intron 40.0%
!! TGAACTCGGCTTTATTGGAT+TGG - chr8_3:53651571-53651590 Msa1295480:intron 40.0%
! GAGAGAGACTTTAGGAGTAA+GGG + chr8_3:53651604-53651623 None:intergenic 40.0%
ACTGTTTGGAGAGAGACTTT+AGG + chr8_3:53651612-53651631 None:intergenic 40.0%
GTCATCACCATACGATGTAT+AGG - chr8_3:53651713-53651732 Msa1295480:CDS 40.0%
ATTGACACGGAAACTTGGGA+AGG + chr8_3:53647533-53647552 None:intergenic 45.0%
TTCCCAAGTTTCCGTGTCAA+TGG - chr8_3:53647532-53647551 Msa1295480:three_prime_UTR 45.0%
AGCCATTGACACGGAAACTT+GGG + chr8_3:53647537-53647556 None:intergenic 45.0%
AAGCCATTGACACGGAAACT+TGG + chr8_3:53647538-53647557 None:intergenic 45.0%
GTAGTGAAGCTGCAACAAGA+AGG + chr8_3:53647616-53647635 None:intergenic 45.0%
TCACAAGCTCAACCATCTCA+AGG - chr8_3:53647816-53647835 Msa1295480:CDS 45.0%
TCACGGAATCGCGTTGTATT+AGG - chr8_3:53647892-53647911 Msa1295480:CDS 45.0%
CAGAACCAGTTTGTGAGTTG+AGG - chr8_3:53647943-53647962 Msa1295480:intron 45.0%
! GAACCAGTTTGTGAGTTGAG+GGG - chr8_3:53647945-53647964 Msa1295480:intron 45.0%
TAATCTATCTAGGCGGGACT+TGG - chr8_3:53648004-53648023 Msa1295480:intron 45.0%
GAGACATGAAAAACTGAGGG+AGG - chr8_3:53648049-53648068 Msa1295480:intron 45.0%
! TTTTCCACCCGAAAGCAGTT+TGG - chr8_3:53648075-53648094 Msa1295480:intron 45.0%
CACTATGTTGTGCAAGGAGA+AGG - chr8_3:53648345-53648364 Msa1295480:intron 45.0%
TTGGTGCATCTGCATTTCAC+TGG - chr8_3:53648394-53648413 Msa1295480:CDS 45.0%
GAACAGCAATCAATCTGTGC+AGG - chr8_3:53648705-53648724 Msa1295480:intron 45.0%
ACTCCTAAAGGGAAGAGAAG+AGG - chr8_3:53648825-53648844 Msa1295480:intron 45.0%
GTTCCTCTTCTCTTCCCTTT+AGG + chr8_3:53648831-53648850 None:intergenic 45.0%
ACTTATCGGACTGACAATCG+AGG + chr8_3:53649364-53649383 None:intergenic 45.0%
! GCCTTAGACTTGCTTGGATT+TGG - chr8_3:53649479-53649498 Msa1295480:intron 45.0%
CCCAAATCCAAGCAAGTCTA+AGG + chr8_3:53649483-53649502 None:intergenic 45.0%
! TAGACTTGCTTGGATTTGGG+TGG - chr8_3:53649483-53649502 Msa1295480:intron 45.0%
TCAAGTCGTGGACTTCATGA+AGG - chr8_3:53649550-53649569 Msa1295480:intron 45.0%
GGAAATTTAGTCTGTCGTGG+TGG - chr8_3:53649699-53649718 Msa1295480:CDS 45.0%
! TGATGACTTTTCAGCCTTGG+AGG - chr8_3:53649967-53649986 Msa1295480:intron 45.0%
! TCTGCAGGACAATTTGGTGA+TGG - chr8_3:53650054-53650073 Msa1295480:intron 45.0%
CGCTGGAAAACTTCCTTCAA+AGG + chr8_3:53650135-53650154 None:intergenic 45.0%
TAAATCCAAGAACCACACGC+TGG + chr8_3:53650152-53650171 None:intergenic 45.0%
! AAGACTGATTCAATCCGAGC+GGG + chr8_3:53650195-53650214 None:intergenic 45.0%
ACGGAAGCTTGTAGCATTAG+TGG - chr8_3:53650689-53650708 Msa1295480:intron 45.0%
CGGAAGCTTGTAGCATTAGT+GGG - chr8_3:53650690-53650709 Msa1295480:intron 45.0%
AGCAGAGTTAAGTCCCTGAA+AGG + chr8_3:53650727-53650746 None:intergenic 45.0%
! ATTGCGTAGCTTGTCAATGC+AGG - chr8_3:53650819-53650838 Msa1295480:intron 45.0%
AAGACTGACTAGGACGGAAA+TGG + chr8_3:53650944-53650963 None:intergenic 45.0%
GTCGGATTGCATGTATAGTG+TGG - chr8_3:53650974-53650993 Msa1295480:CDS 45.0%
CCTGCAGAGAACAATATGTC+AGG + chr8_3:53651343-53651362 None:intergenic 45.0%
CCTGACATATTGTTCTCTGC+AGG - chr8_3:53651340-53651359 Msa1295480:intron 45.0%
!! CTCTTGTTAACTTGCAAGCC+GGG - chr8_3:53651517-53651536 Msa1295480:CDS 45.0%
GATACCGGAACTTGTGAACT+CGG - chr8_3:53651557-53651576 Msa1295480:intron 45.0%
AAAGCCGAGTTCACAAGTTC+CGG + chr8_3:53651564-53651583 None:intergenic 45.0%
! AGAGACTTTAGGAGTAAGGG+TGG + chr8_3:53651601-53651620 None:intergenic 45.0%
! GGAGAGAGACTTTAGGAGTA+AGG + chr8_3:53651605-53651624 None:intergenic 45.0%
CGGCTTTCCTATACATCGTA+TGG + chr8_3:53651723-53651742 None:intergenic 45.0%
CTGTCGACACACATAGACTA+TGG - chr8_3:53651778-53651797 Msa1295480:five_prime_UTR 45.0%
!! TTAACTTATTAAAAAAAAAT+AGG + chr8_3:53649924-53649943 None:intergenic 5.0%
! GTGGTGATGAGTGAGTGTTG+TGG + chr8_3:53647431-53647450 None:intergenic 50.0%
GTGAAGCTGCAACAAGAAGG+TGG + chr8_3:53647613-53647632 None:intergenic 50.0%
GGCAACTGGGGTTTCAGTTA+TGG - chr8_3:53647779-53647798 Msa1295480:CDS 50.0%
ACATCCAAACTGCTTTCGGG+TGG + chr8_3:53648082-53648101 None:intergenic 50.0%
! GTTGTCCGGATGCGTGTTTT+CGG - chr8_3:53648133-53648152 Msa1295480:intron 50.0%
TTCGTCCGAAAACACGCATC+CGG + chr8_3:53648141-53648160 None:intergenic 50.0%
GTGCATCTGCATTTCACTGG+AGG - chr8_3:53648397-53648416 Msa1295480:CDS 50.0%
! ACTCGTCGACTATGATGCCA+TGG - chr8_3:53649517-53649536 Msa1295480:intron 50.0%
TCGACTATGATGCCATGGTG+TGG - chr8_3:53649522-53649541 Msa1295480:intron 50.0%
ACTATGATGCCATGGTGTGG+AGG - chr8_3:53649525-53649544 Msa1295480:intron 50.0%
CTATGATGCCATGGTGTGGA+GGG - chr8_3:53649526-53649545 Msa1295480:intron 50.0%
TGTCGTGGTGGCAAACACAA+TGG - chr8_3:53649711-53649730 Msa1295480:CDS 50.0%
AACACAATGGTGTCCATCGC+TGG - chr8_3:53649724-53649743 Msa1295480:CDS 50.0%
CTATTTGTCGTGACCAGCGA+TGG + chr8_3:53649740-53649759 None:intergenic 50.0%
ACTGCTTTGATTGCAGCAGC+TGG - chr8_3:53649994-53650013 Msa1295480:intron 50.0%
CTGCTTTGATTGCAGCAGCT+GGG - chr8_3:53649995-53650014 Msa1295480:intron 50.0%
! GAAGGAAGTTTTCCAGCGTG+TGG - chr8_3:53650137-53650156 Msa1295480:intron 50.0%
! GTTTTCCAGCGTGTGGTTCT+TGG - chr8_3:53650144-53650163 Msa1295480:intron 50.0%
GGAACTCTAGCTATGACAGC+AGG + chr8_3:53651016-53651035 None:intergenic 50.0%
GTTGTGGCCTGTGAGTATGA+CGG + chr8_3:53651047-53651066 None:intergenic 50.0%
TTGCCCGTTGCTTCTGCTAT+GGG - chr8_3:53651428-53651447 Msa1295480:intron 50.0%
TCACCCCATAGCAGAAGCAA+CGG + chr8_3:53651435-53651454 None:intergenic 50.0%
TATGGGGTGACCTTGATCCA+TGG - chr8_3:53651445-53651464 Msa1295480:intron 50.0%
ATGGGGTGACCTTGATCCAT+GGG - chr8_3:53651446-53651465 Msa1295480:intron 50.0%
AAGTTCCGGTATCTCGTCGT+GGG + chr8_3:53651550-53651569 None:intergenic 50.0%
ACGCCCCTCAACTCACAAAC+TGG + chr8_3:53647951-53647970 None:intergenic 55.0%
GACTTGATCCCTCCACACCA+TGG + chr8_3:53649537-53649556 None:intergenic 55.0%
TGGGTTGCCTGAGTCTGTCA+CGG - chr8_3:53650014-53650033 Msa1295480:intron 55.0%
CTTGCCCGTTGCTTCTGCTA+TGG - chr8_3:53651427-53651446 Msa1295480:intron 55.0%
TGCCCGTTGCTTCTGCTATG+GGG - chr8_3:53651429-53651448 Msa1295480:intron 55.0%
CACCCCATAGCAGAAGCAAC+GGG + chr8_3:53651434-53651453 None:intergenic 55.0%
GGTGACCTTGATCCATGGGT+TGG - chr8_3:53651450-53651469 Msa1295480:intron 55.0%
CTGGACCAACCCATGGATCA+AGG + chr8_3:53651458-53651477 None:intergenic 55.0%
AGTTCCGGTATCTCGTCGTG+GGG + chr8_3:53651549-53651568 None:intergenic 55.0%
CAAGTTCCGGTATCTCGTCG+TGG + chr8_3:53651551-53651570 None:intergenic 55.0%
GGTGTGGAGGGATCAAGTCG+TGG - chr8_3:53649538-53649557 Msa1295480:intron 60.0%
GGGTTGCCTGAGTCTGTCAC+GGG - chr8_3:53650015-53650034 Msa1295480:intron 60.0%
GGTTGCCTGAGTCTGTCACG+GGG - chr8_3:53650016-53650035 Msa1295480:intron 60.0%
GTTGCCTGAGTCTGTCACGG+GGG - chr8_3:53650017-53650036 Msa1295480:intron 60.0%
ACAACCCCCGTGACAGACTC+AGG + chr8_3:53650024-53650043 None:intergenic 60.0%
CCAGCTCAAGACCCCAATGC+CGG - chr8_3:53650895-53650914 Msa1295480:CDS 60.0%
GCTTTCGCTGGACCAACCCA+TGG + chr8_3:53651465-53651484 None:intergenic 60.0%
TTGCCCCCACGACGAGATAC+CGG - chr8_3:53651542-53651561 Msa1295480:CDS 60.0%
GTTCCGGTATCTCGTCGTGG+GGG + chr8_3:53651548-53651567 None:intergenic 60.0%
GGCAGTCGAAGCAACCCGCT+CGG - chr8_3:53650178-53650197 Msa1295480:intron 65.0%
! CCGGCATTGGGGTCTTGAGC+TGG + chr8_3:53650898-53650917 None:intergenic 65.0%
CTCGTCGTGGGGGCAATGCC+CGG + chr8_3:53651538-53651557 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 53647405 53651892 53647405 ID=Msa1295480;Name=Msa1295480
chr8_3 mRNA 53647405 53651892 53647405 ID=Msa1295480-mRNA-1;Parent=Msa1295480;Name=Msa1295480-mRNA-1;_AED=0.02;_eAED=0.02;_QI=146|1|1|1|1|1|7|257|375
chr8_3 exon 53647405 53647935 53647405 ID=Msa1295480-mRNA-1:exon:15400;Parent=Msa1295480-mRNA-1
chr8_3 exon 53648365 53648456 53648365 ID=Msa1295480-mRNA-1:exon:15399;Parent=Msa1295480-mRNA-1
chr8_3 exon 53649076 53649316 53649076 ID=Msa1295480-mRNA-1:exon:15398;Parent=Msa1295480-mRNA-1
chr8_3 exon 53649688 53649858 53649688 ID=Msa1295480-mRNA-1:exon:15397;Parent=Msa1295480-mRNA-1
chr8_3 exon 53650879 53651023 53650879 ID=Msa1295480-mRNA-1:exon:15396;Parent=Msa1295480-mRNA-1
chr8_3 exon 53651460 53651567 53651460 ID=Msa1295480-mRNA-1:exon:15395;Parent=Msa1295480-mRNA-1
chr8_3 exon 53651650 53651892 53651650 ID=Msa1295480-mRNA-1:exon:15394;Parent=Msa1295480-mRNA-1
chr8_3 five_prime_UTR 53651747 53651892 53651747 ID=Msa1295480-mRNA-1:five_prime_utr;Parent=Msa1295480-mRNA-1
chr8_3 CDS 53651650 53651746 53651650 ID=Msa1295480-mRNA-1:cds;Parent=Msa1295480-mRNA-1
chr8_3 CDS 53651460 53651567 53651460 ID=Msa1295480-mRNA-1:cds;Parent=Msa1295480-mRNA-1
chr8_3 CDS 53650879 53651023 53650879 ID=Msa1295480-mRNA-1:cds;Parent=Msa1295480-mRNA-1
chr8_3 CDS 53649688 53649858 53649688 ID=Msa1295480-mRNA-1:cds;Parent=Msa1295480-mRNA-1
chr8_3 CDS 53649076 53649316 53649076 ID=Msa1295480-mRNA-1:cds;Parent=Msa1295480-mRNA-1
chr8_3 CDS 53648365 53648456 53648365 ID=Msa1295480-mRNA-1:cds;Parent=Msa1295480-mRNA-1
chr8_3 CDS 53647662 53647935 53647662 ID=Msa1295480-mRNA-1:cds;Parent=Msa1295480-mRNA-1
chr8_3 three_prime_UTR 53647405 53647661 53647405 ID=Msa1295480-mRNA-1:three_prime_utr;Parent=Msa1295480-mRNA-1
Gene Sequence

>Msa1295480

ATGGCTTCTTGTATATCTACTCCCTCTCCTTCTCCTAGATTACAACTCACCAAAACAAACCACCTTCTTGTTGCAGCTTCACTACCTCTCTATCACAGAAGTAAATGTGAATTGAACAGAAGAAGTTTAGCTTTTAAAGGAATTATGGCAACTGGGGTTTCAGTTATGGCTTCCTCTCTTACTTCACAAGCTCAACCATCTCAAGAGAAGGAACTTGAAAGATTAGCATACAAAGCAGAAGGGTACAATTATTGGAAGTGGAAGGATCATAAAATTCACTATGTTGTGCAAGGAGAAGGCCCTCCTCTTGTTCTTATTCATGGTTTTGGTGCATCTGCATTTCACTGGAGATACAATATTCCAGAATTGGCCAAGAAACACAAGGTTTATGCCTTAGACTTGCTTGGATTTGGGTGGAGTGACAAAGCACTCGTCGACTATGATGCCATGGTGTGGAGGGATCAAGTCGTGGACTTCATGAAGGAAATTGTTAAAGAACCAGCAGTTTTGGTTGGAAATAGCCTTGGAGGATTTACTGCTTTGATTGCAGCAGCTGGGTTGCCTGAGTCTGTCACGGGGGTTGTTCTACTGAATTCTGCAGGACAATTTGGTGATGGAAATAAGGAACAGAAAACTTCAGAGGAAACATCTCTACAAAAGTTTTTCCTAAAACCTTTGAAGGAAGTTTTCCAGCGTGTGGTTCTTGGATTTATATTCTGGCAGTCGAAGCAACCCGCTCGGATTGAATCAGTCTTAAAAAGTGTGTATAAAAACTCTTCCAATGTGGATGACTATCTTGTGGAATCTATAACAAGGCCAGCTCAAGACCCCAATGCCGGAGAAGTTTATTACAGGTTAATGACACGCTTCATGATGAATCAAAGCAAGTACACTCTTGATTCTGTGTTAGGCGAACTATCTTGCCCGTTGCTTCTGCTATGGGGTGACCTTGATCCATGGGTTGGTCCAGCGAAAGCTAACAAAATCAAAGAGTTTTATCCAAAAACAACTCTTGTTAACTTGCAAGCCGGGCATTGCCCCCACGACGAGATACCGGAACTTGTGAACTCGGCTTTATTGGATTGGCTCGCCACCCTTACTCCTAAAGTCTCTCTCCAAACAGTTTGA

Protein sequence

>Msa1295480

MASCISTPSPSPRLQLTKTNHLLVAASLPLYHRSKCELNRRSLAFKGIMATGVSVMASSLTSQAQPSQEKELERLAYKAEGYNYWKWKDHKIHYVVQGEGPPLVLIHGFGASAFHWRYNIPELAKKHKVYALDLLGFGWSDKALVDYDAMVWRDQVVDFMKEIVKEPAVLVGNSLGGFTALIAAAGLPESVTGVVLLNSAGQFGDGNKEQKTSEETSLQKFFLKPLKEVFQRVVLGFIFWQSKQPARIESVLKSVYKNSSNVDDYLVESITRPAQDPNAGEVYYRLMTRFMMNQSKYTLDSVLGELSCPLLLLWGDLDPWVGPAKANKIKEFYPKTTLVNLQAGHCPHDEIPELVNSALLDWLATLTPKVSLQTV*