AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0175210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0175210 MtrunA17_Chr1g0160901 85.870 184 14 2 1 172 1 184 5.42e-107 303
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0175210 AT2G01590.1 45.378 119 55 3 56 172 64 174 3.08e-29 106
Msa0175210 AT2G01590.2 45.378 119 55 3 56 172 64 174 3.22e-29 106

Find 63 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATGGATGATGCCAATT+TGG 0.174687 1_4:+61080714 Msa0175210:CDS
GGAGAGTGGCTGGGTGAAAA+TGG 0.232098 1_4:+61079487 Msa0175210:CDS
AAGAAGGAGAATCTGGGTTT+TGG 0.263897 1_4:-61079058 None:intergenic
GGTCGACGGGGAAGCTTGTT+TGG 0.309086 1_4:-61079143 None:intergenic
TGAAGGAAGATTGGTTTGTT+TGG 0.316880 1_4:-61079087 None:intergenic
GAATAATTGTAAATTACTTA+AGG 0.320937 1_4:+61080843 Msa0175210:three_prime_UTR
TGTTGCAGGAAGAGGGATTC+TGG 0.323286 1_4:+61080682 Msa0175210:intron
TGATGACTCCAGAAGCTATT+AGG 0.324132 1_4:-61080748 None:intergenic
GGTGAAGAAGAAGGAGAATC+TGG 0.329084 1_4:-61079065 None:intergenic
TCAATGGATGATGCCAATTT+GGG 0.347182 1_4:+61080715 Msa0175210:CDS
AATAATTGTAAATTACTTAA+GGG 0.357061 1_4:+61080844 Msa0175210:three_prime_UTR
GACCACGATGGATTTGTTCT+TGG 0.365556 1_4:+61079420 Msa0175210:CDS
ATATCCTTCCTAATAGCTTC+TGG 0.373907 1_4:+61080740 Msa0175210:CDS
ACCACGATGGATTTGTTCTT+GGG 0.379690 1_4:+61079421 Msa0175210:CDS
AGGAAGGATATAGCCCAAAT+TGG 0.383783 1_4:-61080728 None:intergenic
ATTTAATGACTTTGCCGAAC+AGG 0.386369 1_4:+61078839 None:intergenic
GAGAGTGGCTGGGTGAAAAT+GGG 0.391269 1_4:+61079488 Msa0175210:CDS
GGTGTTAGTGGAGCGAAATC+TGG 0.391808 1_4:-61079515 None:intergenic
GAAGGAAGATTGGTTTGTTT+GGG 0.393144 1_4:-61079086 None:intergenic
TTCTGGTGTTTGCATTTCAA+TGG 0.394891 1_4:+61080699 Msa0175210:CDS
ATTAGTAATAAGAATGGGTT+TGG 0.396058 1_4:-61079024 None:intergenic
GGAGCTTAGTGAAGGAAGAT+TGG 0.404031 1_4:-61079096 None:intergenic
TTGCTACTTACTGGTGTTAG+TGG 0.404594 1_4:-61079527 None:intergenic
TATCATCTATTTATCCTGTT+CGG 0.410137 1_4:-61078853 None:intergenic
CGAAGATGGTGATGGTCGAC+GGG 0.447807 1_4:-61079156 None:intergenic
GAGGGAAACAGGAGAGTGGC+TGG 0.452230 1_4:+61079477 Msa0175210:CDS
TCAATTTGCATGAGCGAAGA+TGG 0.459616 1_4:-61079170 None:intergenic
AGGAGGAGGTCATCAAGAAA+AGG 0.472004 1_4:-61080788 None:intergenic
GTTGCATTAGTAATAAGAAT+GGG 0.473568 1_4:-61079029 None:intergenic
GTTTGTTTGGGTGAAGAAGA+AGG 0.476332 1_4:-61079074 None:intergenic
AGTTGCATTAGTAATAAGAA+TGG 0.478851 1_4:-61079030 None:intergenic
TTCTTGGGACAAGTATTTGA+AGG 0.485835 1_4:+61079436 Msa0175210:CDS
AACTGGATGTTCACAGGAGG+AGG 0.486947 1_4:-61080802 None:intergenic
ATTGAACGTGCCCTTGGCGC+TGG 0.500974 1_4:+61079188 Msa0175210:CDS
TATATAACAACGATAAGATC+AGG 0.506931 1_4:-61078897 None:intergenic
TCAAGAAAAGGGACACTGAA+TGG 0.508495 1_4:-61080776 None:intergenic
CCAGTAATAAGAAGAATATA+CGG 0.508841 1_4:-61081005 None:intergenic
ATGCAAATTGAACGTGCCCT+TGG 0.511985 1_4:+61079182 Msa0175210:CDS
ATAGAAGAAGTGTTGATAAG+AGG 0.516204 1_4:+61078873 Msa0175210:five_prime_UTR
GAGCATGCATACTTGAGGTC+AGG 0.520818 1_4:-61079230 None:intergenic
CTCTGAAGCTACCAGCGCCA+AGG 0.529782 1_4:-61079199 None:intergenic
GGAGGAGGTCATCAAGAAAA+GGG 0.540475 1_4:-61080787 None:intergenic
ATAATTGTAAATTACTTAAG+GGG 0.542003 1_4:+61080845 Msa0175210:three_prime_UTR
GCGAAGATGGTGATGGTCGA+CGG 0.545160 1_4:-61079157 None:intergenic
AAAAGAAACTGGATGTTCAC+AGG 0.553095 1_4:-61080808 None:intergenic
GTGAAGAAGAAGGAGAATCT+GGG 0.555091 1_4:-61079064 None:intergenic
TTTAAACTGTTGCAGGAAGA+GGG 0.557549 1_4:+61080675 Msa0175210:intron
TCTTGGGACAAGTATTTGAA+GGG 0.567555 1_4:+61079437 Msa0175210:CDS
CGACGGGGAAGCTTGTTTGG+AGG 0.576924 1_4:-61079140 None:intergenic
AGAGTGGCTGGGTGAAAATG+GGG 0.590303 1_4:+61079489 Msa0175210:CDS
TCTGAAGCTACCAGCGCCAA+GGG 0.590855 1_4:-61079198 None:intergenic
GTTTGGAGGTAATGAAGTAG+TGG 0.605102 1_4:-61079126 None:intergenic
GACTCCAGAAGCTATTAGGA+AGG 0.610571 1_4:-61080744 None:intergenic
AGGGAAACAGGAGAGTGGCT+GGG 0.620803 1_4:+61079478 Msa0175210:CDS
GGCGCTGGTAGCTTCAGAGA+CGG 0.635842 1_4:+61079203 Msa0175210:CDS
CATAAGCAAAACATTGCAGA+GGG 0.641080 1_4:-61078984 None:intergenic
GCATAAGCAAAACATTGCAG+AGG 0.658841 1_4:-61078985 None:intergenic
AGCTGAGGGAAACAGGAGAG+TGG 0.671817 1_4:+61079473 Msa0175210:CDS
AGAAACTGGATGTTCACAGG+AGG 0.686209 1_4:-61080805 None:intergenic
GAAGATGGTGATGGTCGACG+GGG 0.719959 1_4:-61079155 None:intergenic
TGCATGAGCGAAGATGGTGA+TGG 0.732147 1_4:-61079164 None:intergenic
TCCCAAGAACAAATCCATCG+TGG 0.736351 1_4:-61079422 None:intergenic
AGACGTAAAGAAGACCACGA+TGG 0.745068 1_4:+61079408 Msa0175210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTGAATAAATAATAAATAA+AGG - chr1_4:61080653-61080672 None:intergenic 10.0%
!! AATAATTGTAAATTACTTAA+GGG + chr1_4:61080844-61080863 Msa0175210:three_prime_UTR 10.0%
!!! TTTTTTTTTTTTTTGAATGA+AGG + chr1_4:61080939-61080958 Msa0175210:three_prime_UTR 10.0%
!! ACTGAATAAATAATAAATAA+AGG - chr1_4:61080653-61080672 None:intergenic 10.0%
!! AATAATTGTAAATTACTTAA+GGG + chr1_4:61080844-61080863 Msa0175210:three_prime_UTR 10.0%
!!! TTTTTTTTTTTTTTGAATGA+AGG + chr1_4:61080939-61080958 Msa0175210:three_prime_UTR 10.0%
!! ATTATAACATTATGATGAAT+AGG + chr1_4:61079283-61079302 Msa0175210:intron 15.0%
!!! TTGTTTTTTAAATAAGAAAC+TGG + chr1_4:61079719-61079738 Msa0175210:intron 15.0%
!! GAATAATTGTAAATTACTTA+AGG + chr1_4:61080843-61080862 Msa0175210:three_prime_UTR 15.0%
!! ATAATTGTAAATTACTTAAG+GGG + chr1_4:61080845-61080864 Msa0175210:three_prime_UTR 15.0%
!! ATTATAACATTATGATGAAT+AGG + chr1_4:61079283-61079302 Msa0175210:intron 15.0%
!!! TTGTTTTTTAAATAAGAAAC+TGG + chr1_4:61079719-61079738 Msa0175210:intron 15.0%
!! GAATAATTGTAAATTACTTA+AGG + chr1_4:61080843-61080862 Msa0175210:three_prime_UTR 15.0%
!! ATAATTGTAAATTACTTAAG+GGG + chr1_4:61080845-61080864 Msa0175210:three_prime_UTR 15.0%
!!! CACTTTTAACATTATGAAAT+TGG - chr1_4:61079325-61079344 None:intergenic 20.0%
!! TGTTAAAGAGACAAAAAATA+AGG - chr1_4:61079568-61079587 None:intergenic 20.0%
!!! TATTTTTTGTCTCTTTAACA+AGG + chr1_4:61079568-61079587 Msa0175210:intron 20.0%
!!! AGATTATTACTTTTTACAAC+TGG - chr1_4:61079777-61079796 None:intergenic 20.0%
!! GTTGTAAAAAGTAATAATCT+TGG + chr1_4:61079777-61079796 Msa0175210:intron 20.0%
!! GACTTTCTTGAAAAAATAAT+TGG - chr1_4:61080266-61080285 None:intergenic 20.0%
!!! ATGTTGATAAATGAAAGAAT+GGG - chr1_4:61080548-61080567 None:intergenic 20.0%
!!! AATGTTGATAAATGAAAGAA+TGG - chr1_4:61080549-61080568 None:intergenic 20.0%
!! ATTTAATAGTAAAAACACGT+TGG + chr1_4:61080895-61080914 Msa0175210:three_prime_UTR 20.0%
!!! CACTTTTAACATTATGAAAT+TGG - chr1_4:61079325-61079344 None:intergenic 20.0%
!! TGTTAAAGAGACAAAAAATA+AGG - chr1_4:61079568-61079587 None:intergenic 20.0%
!!! TATTTTTTGTCTCTTTAACA+AGG + chr1_4:61079568-61079587 Msa0175210:intron 20.0%
!!! AGATTATTACTTTTTACAAC+TGG - chr1_4:61079777-61079796 None:intergenic 20.0%
!! GTTGTAAAAAGTAATAATCT+TGG + chr1_4:61079777-61079796 Msa0175210:intron 20.0%
!! GACTTTCTTGAAAAAATAAT+TGG - chr1_4:61080266-61080285 None:intergenic 20.0%
!!! ATGTTGATAAATGAAAGAAT+GGG - chr1_4:61080548-61080567 None:intergenic 20.0%
!!! AATGTTGATAAATGAAAGAA+TGG - chr1_4:61080549-61080568 None:intergenic 20.0%
!! ATTTAATAGTAAAAACACGT+TGG + chr1_4:61080895-61080914 Msa0175210:three_prime_UTR 20.0%
! TATCATCTATTTATCCTGTT+CGG - chr1_4:61078856-61078875 None:intergenic 25.0%
! TATATAACAACGATAAGATC+AGG - chr1_4:61078900-61078919 None:intergenic 25.0%
!! ATTAGTAATAAGAATGGGTT+TGG - chr1_4:61079027-61079046 None:intergenic 25.0%
! GTTGCATTAGTAATAAGAAT+GGG - chr1_4:61079032-61079051 None:intergenic 25.0%
! AGTTGCATTAGTAATAAGAA+TGG - chr1_4:61079033-61079052 None:intergenic 25.0%
! ATCAAAATCCAGAATGAAAT+TGG - chr1_4:61079350-61079369 None:intergenic 25.0%
! AAATAATTGGTCACACAATA+CGG - chr1_4:61080253-61080272 None:intergenic 25.0%
! AAGGAATAAAATGACTTTCT+TGG - chr1_4:61080446-61080465 None:intergenic 25.0%
!! TTGAATTGTAGCATATTTTG+CGG + chr1_4:61080571-61080590 Msa0175210:intron 25.0%
! TTCAATCTAGAAAAAGAAAC+TGG - chr1_4:61080822-61080841 None:intergenic 25.0%
! TATCATCTATTTATCCTGTT+CGG - chr1_4:61078856-61078875 None:intergenic 25.0%
! TATATAACAACGATAAGATC+AGG - chr1_4:61078900-61078919 None:intergenic 25.0%
!! ATTAGTAATAAGAATGGGTT+TGG - chr1_4:61079027-61079046 None:intergenic 25.0%
! GTTGCATTAGTAATAAGAAT+GGG - chr1_4:61079032-61079051 None:intergenic 25.0%
! AGTTGCATTAGTAATAAGAA+TGG - chr1_4:61079033-61079052 None:intergenic 25.0%
! ATCAAAATCCAGAATGAAAT+TGG - chr1_4:61079350-61079369 None:intergenic 25.0%
! AAATAATTGGTCACACAATA+CGG - chr1_4:61080253-61080272 None:intergenic 25.0%
! AAGGAATAAAATGACTTTCT+TGG - chr1_4:61080446-61080465 None:intergenic 25.0%
!! TTGAATTGTAGCATATTTTG+CGG + chr1_4:61080571-61080590 Msa0175210:intron 25.0%
! TTCAATCTAGAAAAAGAAAC+TGG - chr1_4:61080822-61080841 None:intergenic 25.0%
!! ATAGAAGAAGTGTTGATAAG+AGG + chr1_4:61078873-61078892 Msa0175210:five_prime_UTR 30.0%
!! TAATGAAGTAGTGGAGTTTT+TGG - chr1_4:61079120-61079139 None:intergenic 30.0%
!! CATGTCTTTTGCTTTGTTAT+AGG + chr1_4:61079602-61079621 Msa0175210:intron 30.0%
! TATCTAGTTCAAACACTACA+TGG + chr1_4:61079880-61079899 Msa0175210:intron 30.0%
TTCAAGTGTAATGTAAACAC+AGG - chr1_4:61080064-61080083 None:intergenic 30.0%
TGTGTTTACATTACACTTGA+AGG + chr1_4:61080063-61080082 Msa0175210:intron 30.0%
!! ATAGAAGAAGTGTTGATAAG+AGG + chr1_4:61078873-61078892 Msa0175210:five_prime_UTR 30.0%
!! TAATGAAGTAGTGGAGTTTT+TGG - chr1_4:61079120-61079139 None:intergenic 30.0%
!! CATGTCTTTTGCTTTGTTAT+AGG + chr1_4:61079602-61079621 Msa0175210:intron 30.0%
! TATCTAGTTCAAACACTACA+TGG + chr1_4:61079880-61079899 Msa0175210:intron 30.0%
TTCAAGTGTAATGTAAACAC+AGG - chr1_4:61080064-61080083 None:intergenic 30.0%
TGTGTTTACATTACACTTGA+AGG + chr1_4:61080063-61080082 Msa0175210:intron 30.0%
CATAAGCAAAACATTGCAGA+GGG - chr1_4:61078987-61079006 None:intergenic 35.0%
!! GAAGGAAGATTGGTTTGTTT+GGG - chr1_4:61079089-61079108 None:intergenic 35.0%
!! TGAAGGAAGATTGGTTTGTT+TGG - chr1_4:61079090-61079109 None:intergenic 35.0%
! AAAGTGCTCCAATTTCATTC+TGG + chr1_4:61079339-61079358 Msa0175210:intron 35.0%
TTCTTGGGACAAGTATTTGA+AGG + chr1_4:61079436-61079455 Msa0175210:CDS 35.0%
TCTTGGGACAAGTATTTGAA+GGG + chr1_4:61079437-61079456 Msa0175210:CDS 35.0%
GTTATAGGTGATTATGAGTG+AGG + chr1_4:61079617-61079636 Msa0175210:intron 35.0%
! TAGATGTCTCATAGTGTTGA+GGG - chr1_4:61079962-61079981 None:intergenic 35.0%
TTACACTTGAAGGATCATGA+TGG + chr1_4:61080073-61080092 Msa0175210:intron 35.0%
ATTTGAGGGCTTACTACAAA+GGG - chr1_4:61080211-61080230 None:intergenic 35.0%
AATTTGAGGGCTTACTACAA+AGG - chr1_4:61080212-61080231 None:intergenic 35.0%
AGGAATCTGCTAGAATTTGA+GGG - chr1_4:61080225-61080244 None:intergenic 35.0%
!! TTTTCAAGAAAGTCAGACCA+AGG + chr1_4:61080272-61080291 Msa0175210:intron 35.0%
! GACAAACATCCAAACTGTTT+TGG + chr1_4:61080405-61080424 Msa0175210:intron 35.0%
GCTAATGGTAGAGATATGAA+AGG - chr1_4:61080465-61080484 None:intergenic 35.0%
TTATCTTGAGGATTTCCTAC+AGG - chr1_4:61080491-61080510 None:intergenic 35.0%
AGGAAATCCTCAAGATAACT+TGG + chr1_4:61080493-61080512 Msa0175210:intron 35.0%
AAATCCTCAAGATAACTTGG+AGG + chr1_4:61080496-61080515 Msa0175210:intron 35.0%
AATCCTCAAGATAACTTGGA+GGG + chr1_4:61080497-61080516 Msa0175210:intron 35.0%
TCAGTGATTTAAACTGTTGC+AGG + chr1_4:61080668-61080687 Msa0175210:intron 35.0%
ATTTAAACTGTTGCAGGAAG+AGG + chr1_4:61080674-61080693 Msa0175210:intron 35.0%
TTTAAACTGTTGCAGGAAGA+GGG + chr1_4:61080675-61080694 Msa0175210:intron 35.0%
TTCTGGTGTTTGCATTTCAA+TGG + chr1_4:61080699-61080718 Msa0175210:CDS 35.0%
TTCAATGGATGATGCCAATT+TGG + chr1_4:61080714-61080733 Msa0175210:CDS 35.0%
TCAATGGATGATGCCAATTT+GGG + chr1_4:61080715-61080734 Msa0175210:CDS 35.0%
ATATCCTTCCTAATAGCTTC+TGG + chr1_4:61080740-61080759 Msa0175210:CDS 35.0%
AAAAGAAACTGGATGTTCAC+AGG - chr1_4:61080811-61080830 None:intergenic 35.0%
CATAAGCAAAACATTGCAGA+GGG - chr1_4:61078987-61079006 None:intergenic 35.0%
!! GAAGGAAGATTGGTTTGTTT+GGG - chr1_4:61079089-61079108 None:intergenic 35.0%
!! TGAAGGAAGATTGGTTTGTT+TGG - chr1_4:61079090-61079109 None:intergenic 35.0%
! AAAGTGCTCCAATTTCATTC+TGG + chr1_4:61079339-61079358 Msa0175210:intron 35.0%
TTCTTGGGACAAGTATTTGA+AGG + chr1_4:61079436-61079455 Msa0175210:CDS 35.0%
TCTTGGGACAAGTATTTGAA+GGG + chr1_4:61079437-61079456 Msa0175210:CDS 35.0%
GTTATAGGTGATTATGAGTG+AGG + chr1_4:61079617-61079636 Msa0175210:intron 35.0%
! TAGATGTCTCATAGTGTTGA+GGG - chr1_4:61079962-61079981 None:intergenic 35.0%
TTACACTTGAAGGATCATGA+TGG + chr1_4:61080073-61080092 Msa0175210:intron 35.0%
ATTTGAGGGCTTACTACAAA+GGG - chr1_4:61080211-61080230 None:intergenic 35.0%
AATTTGAGGGCTTACTACAA+AGG - chr1_4:61080212-61080231 None:intergenic 35.0%
AGGAATCTGCTAGAATTTGA+GGG - chr1_4:61080225-61080244 None:intergenic 35.0%
!! TTTTCAAGAAAGTCAGACCA+AGG + chr1_4:61080272-61080291 Msa0175210:intron 35.0%
! GACAAACATCCAAACTGTTT+TGG + chr1_4:61080405-61080424 Msa0175210:intron 35.0%
GCTAATGGTAGAGATATGAA+AGG - chr1_4:61080465-61080484 None:intergenic 35.0%
TTATCTTGAGGATTTCCTAC+AGG - chr1_4:61080491-61080510 None:intergenic 35.0%
AGGAAATCCTCAAGATAACT+TGG + chr1_4:61080493-61080512 Msa0175210:intron 35.0%
AAATCCTCAAGATAACTTGG+AGG + chr1_4:61080496-61080515 Msa0175210:intron 35.0%
AATCCTCAAGATAACTTGGA+GGG + chr1_4:61080497-61080516 Msa0175210:intron 35.0%
TCAGTGATTTAAACTGTTGC+AGG + chr1_4:61080668-61080687 Msa0175210:intron 35.0%
ATTTAAACTGTTGCAGGAAG+AGG + chr1_4:61080674-61080693 Msa0175210:intron 35.0%
TTTAAACTGTTGCAGGAAGA+GGG + chr1_4:61080675-61080694 Msa0175210:intron 35.0%
TTCTGGTGTTTGCATTTCAA+TGG + chr1_4:61080699-61080718 Msa0175210:CDS 35.0%
TTCAATGGATGATGCCAATT+TGG + chr1_4:61080714-61080733 Msa0175210:CDS 35.0%
TCAATGGATGATGCCAATTT+GGG + chr1_4:61080715-61080734 Msa0175210:CDS 35.0%
ATATCCTTCCTAATAGCTTC+TGG + chr1_4:61080740-61080759 Msa0175210:CDS 35.0%
AAAAGAAACTGGATGTTCAC+AGG - chr1_4:61080811-61080830 None:intergenic 35.0%
GCATAAGCAAAACATTGCAG+AGG - chr1_4:61078988-61079007 None:intergenic 40.0%
! AGAAGGAGAATCTGGGTTTT+GGG - chr1_4:61079060-61079079 None:intergenic 40.0%
! AAGAAGGAGAATCTGGGTTT+TGG - chr1_4:61079061-61079080 None:intergenic 40.0%
GTGAAGAAGAAGGAGAATCT+GGG - chr1_4:61079067-61079086 None:intergenic 40.0%
GTTTGTTTGGGTGAAGAAGA+AGG - chr1_4:61079077-61079096 None:intergenic 40.0%
!!! GAGTTTTTGGAGCTTAGTGA+AGG - chr1_4:61079107-61079126 None:intergenic 40.0%
GTTTGGAGGTAATGAAGTAG+TGG - chr1_4:61079129-61079148 None:intergenic 40.0%
TCAATTTGCATGAGCGAAGA+TGG - chr1_4:61079173-61079192 None:intergenic 40.0%
AAACAGAGCATGCATACTTG+AGG - chr1_4:61079238-61079257 None:intergenic 40.0%
! ACCACGATGGATTTGTTCTT+GGG + chr1_4:61079421-61079440 Msa0175210:CDS 40.0%
! TTGCTACTTACTGGTGTTAG+TGG - chr1_4:61079530-61079549 None:intergenic 40.0%
TAACACCAGTAAGTAGCAAC+TGG + chr1_4:61079531-61079550 Msa0175210:intron 40.0%
TCTCGAGATCTACAAGTCTT+TGG + chr1_4:61079856-61079875 Msa0175210:intron 40.0%
CTAGATGTCTCATAGTGTTG+AGG - chr1_4:61079963-61079982 None:intergenic 40.0%
ACAGAATTGGTGAGAACCTT+TGG - chr1_4:61080034-61080053 None:intergenic 40.0%
TTTGACCATTGTCCAACCAA+GGG + chr1_4:61080136-61080155 Msa0175210:intron 40.0%
TTTGAGGGCTTACTACAAAG+GGG - chr1_4:61080210-61080229 None:intergenic 40.0%
GAGGAATCTGCTAGAATTTG+AGG - chr1_4:61080226-61080245 None:intergenic 40.0%
AATTGGTCACACAATACGGA+GGG - chr1_4:61080249-61080268 None:intergenic 40.0%
TAATTGGTCACACAATACGG+AGG - chr1_4:61080250-61080269 None:intergenic 40.0%
GTCAGACCAAGGAAAATACA+TGG + chr1_4:61080283-61080302 Msa0175210:intron 40.0%
! TCAAGGCCATGTATTTTCCT+TGG - chr1_4:61080292-61080311 None:intergenic 40.0%
ATGTTGTCGAGGAATGTTCA+AGG - chr1_4:61080309-61080328 None:intergenic 40.0%
ACCTTCAACATAGCAATTCC+TGG - chr1_4:61080369-61080388 None:intergenic 40.0%
!!! ACATCCAAACTGTTTTGGCA+TGG + chr1_4:61080410-61080429 Msa0175210:intron 40.0%
CTATCCATGCCAAAACAGTT+TGG - chr1_4:61080417-61080436 None:intergenic 40.0%
! ATTTCCTACAGGTTGGCTAA+TGG - chr1_4:61080480-61080499 None:intergenic 40.0%
ATACCCTCCAAGTTATCTTG+AGG - chr1_4:61080503-61080522 None:intergenic 40.0%
AGGAAGGATATAGCCCAAAT+TGG - chr1_4:61080731-61080750 None:intergenic 40.0%
TGATGACTCCAGAAGCTATT+AGG - chr1_4:61080751-61080770 None:intergenic 40.0%
TCAAGAAAAGGGACACTGAA+TGG - chr1_4:61080779-61080798 None:intergenic 40.0%
GCATAAGCAAAACATTGCAG+AGG - chr1_4:61078988-61079007 None:intergenic 40.0%
! AGAAGGAGAATCTGGGTTTT+GGG - chr1_4:61079060-61079079 None:intergenic 40.0%
! AAGAAGGAGAATCTGGGTTT+TGG - chr1_4:61079061-61079080 None:intergenic 40.0%
GTGAAGAAGAAGGAGAATCT+GGG - chr1_4:61079067-61079086 None:intergenic 40.0%
GTTTGTTTGGGTGAAGAAGA+AGG - chr1_4:61079077-61079096 None:intergenic 40.0%
!!! GAGTTTTTGGAGCTTAGTGA+AGG - chr1_4:61079107-61079126 None:intergenic 40.0%
GTTTGGAGGTAATGAAGTAG+TGG - chr1_4:61079129-61079148 None:intergenic 40.0%
TCAATTTGCATGAGCGAAGA+TGG - chr1_4:61079173-61079192 None:intergenic 40.0%
AAACAGAGCATGCATACTTG+AGG - chr1_4:61079238-61079257 None:intergenic 40.0%
! ACCACGATGGATTTGTTCTT+GGG + chr1_4:61079421-61079440 Msa0175210:CDS 40.0%
! TTGCTACTTACTGGTGTTAG+TGG - chr1_4:61079530-61079549 None:intergenic 40.0%
TAACACCAGTAAGTAGCAAC+TGG + chr1_4:61079531-61079550 Msa0175210:intron 40.0%
TCTCGAGATCTACAAGTCTT+TGG + chr1_4:61079856-61079875 Msa0175210:intron 40.0%
CTAGATGTCTCATAGTGTTG+AGG - chr1_4:61079963-61079982 None:intergenic 40.0%
ACAGAATTGGTGAGAACCTT+TGG - chr1_4:61080034-61080053 None:intergenic 40.0%
TTTGACCATTGTCCAACCAA+GGG + chr1_4:61080136-61080155 Msa0175210:intron 40.0%
TTTGAGGGCTTACTACAAAG+GGG - chr1_4:61080210-61080229 None:intergenic 40.0%
GAGGAATCTGCTAGAATTTG+AGG - chr1_4:61080226-61080245 None:intergenic 40.0%
AATTGGTCACACAATACGGA+GGG - chr1_4:61080249-61080268 None:intergenic 40.0%
TAATTGGTCACACAATACGG+AGG - chr1_4:61080250-61080269 None:intergenic 40.0%
GTCAGACCAAGGAAAATACA+TGG + chr1_4:61080283-61080302 Msa0175210:intron 40.0%
! TCAAGGCCATGTATTTTCCT+TGG - chr1_4:61080292-61080311 None:intergenic 40.0%
ATGTTGTCGAGGAATGTTCA+AGG - chr1_4:61080309-61080328 None:intergenic 40.0%
ACCTTCAACATAGCAATTCC+TGG - chr1_4:61080369-61080388 None:intergenic 40.0%
!!! ACATCCAAACTGTTTTGGCA+TGG + chr1_4:61080410-61080429 Msa0175210:intron 40.0%
CTATCCATGCCAAAACAGTT+TGG - chr1_4:61080417-61080436 None:intergenic 40.0%
! ATTTCCTACAGGTTGGCTAA+TGG - chr1_4:61080480-61080499 None:intergenic 40.0%
ATACCCTCCAAGTTATCTTG+AGG - chr1_4:61080503-61080522 None:intergenic 40.0%
AGGAAGGATATAGCCCAAAT+TGG - chr1_4:61080731-61080750 None:intergenic 40.0%
TGATGACTCCAGAAGCTATT+AGG - chr1_4:61080751-61080770 None:intergenic 40.0%
TCAAGAAAAGGGACACTGAA+TGG - chr1_4:61080779-61080798 None:intergenic 40.0%
! GAAGGAGAATCTGGGTTTTG+GGG - chr1_4:61079059-61079078 None:intergenic 45.0%
GGTGAAGAAGAAGGAGAATC+TGG - chr1_4:61079068-61079087 None:intergenic 45.0%
GGAGCTTAGTGAAGGAAGAT+TGG - chr1_4:61079099-61079118 None:intergenic 45.0%
ATGCAAATTGAACGTGCCCT+TGG + chr1_4:61079182-61079201 Msa0175210:CDS 45.0%
AGACGTAAAGAAGACCACGA+TGG + chr1_4:61079408-61079427 Msa0175210:CDS 45.0%
! GACCACGATGGATTTGTTCT+TGG + chr1_4:61079420-61079439 Msa0175210:CDS 45.0%
TCCCAAGAACAAATCCATCG+TGG - chr1_4:61079425-61079444 None:intergenic 45.0%
GACTGTGCAGAAAAAGCTGA+GGG + chr1_4:61079459-61079478 Msa0175210:CDS 45.0%
CAGAAAAAGCTGAGGGAAAC+AGG + chr1_4:61079466-61079485 Msa0175210:CDS 45.0%
! CGTTACCAGTTGCTACTTAC+TGG - chr1_4:61079539-61079558 None:intergenic 45.0%
GTAGATCTCGAGACAAGCAA+TGG - chr1_4:61079849-61079868 None:intergenic 45.0%
AGTGCATCAGAGAAGAGACA+CGG - chr1_4:61080009-61080028 None:intergenic 45.0%
TTCTCTGATGCACTTGCCAA+AGG + chr1_4:61080015-61080034 Msa0175210:intron 45.0%
GTTTGACCATTGTCCAACCA+AGG + chr1_4:61080135-61080154 Msa0175210:intron 45.0%
TTGACCATTGTCCAACCAAG+GGG + chr1_4:61080137-61080156 Msa0175210:intron 45.0%
! AATTTAAGACCCCCCTTGGT+TGG - chr1_4:61080151-61080170 None:intergenic 45.0%
AACCAAGGGGGGTCTTAAAT+TGG + chr1_4:61080150-61080169 Msa0175210:intron 45.0%
ACCAAGGGGGGTCTTAAATT+GGG + chr1_4:61080151-61080170 Msa0175210:intron 45.0%
ATTGGTCACACAATACGGAG+GGG - chr1_4:61080248-61080267 None:intergenic 45.0%
TTCCTCGACAACATAGCATC+CGG + chr1_4:61080315-61080334 Msa0175210:intron 45.0%
CTCAAGGTTTATCATGCACC+CGG - chr1_4:61080337-61080356 None:intergenic 45.0%
GCCAGGAATTGCTATGTTGA+AGG + chr1_4:61080365-61080384 Msa0175210:intron 45.0%
TCTACCATTAGCCAACCTGT+AGG + chr1_4:61080473-61080492 Msa0175210:intron 45.0%
CTTGAGGATTTCCTACAGGT+TGG - chr1_4:61080487-61080506 None:intergenic 45.0%
GACTCCAGAAGCTATTAGGA+AGG - chr1_4:61080747-61080766 None:intergenic 45.0%
GGAGGAGGTCATCAAGAAAA+GGG - chr1_4:61080790-61080809 None:intergenic 45.0%
AGGAGGAGGTCATCAAGAAA+AGG - chr1_4:61080791-61080810 None:intergenic 45.0%
AGAAACTGGATGTTCACAGG+AGG - chr1_4:61080808-61080827 None:intergenic 45.0%
! GAAGGAGAATCTGGGTTTTG+GGG - chr1_4:61079059-61079078 None:intergenic 45.0%
GGTGAAGAAGAAGGAGAATC+TGG - chr1_4:61079068-61079087 None:intergenic 45.0%
GGAGCTTAGTGAAGGAAGAT+TGG - chr1_4:61079099-61079118 None:intergenic 45.0%
ATGCAAATTGAACGTGCCCT+TGG + chr1_4:61079182-61079201 Msa0175210:CDS 45.0%
AGACGTAAAGAAGACCACGA+TGG + chr1_4:61079408-61079427 Msa0175210:CDS 45.0%
! GACCACGATGGATTTGTTCT+TGG + chr1_4:61079420-61079439 Msa0175210:CDS 45.0%
TCCCAAGAACAAATCCATCG+TGG - chr1_4:61079425-61079444 None:intergenic 45.0%
GACTGTGCAGAAAAAGCTGA+GGG + chr1_4:61079459-61079478 Msa0175210:CDS 45.0%
CAGAAAAAGCTGAGGGAAAC+AGG + chr1_4:61079466-61079485 Msa0175210:CDS 45.0%
! CGTTACCAGTTGCTACTTAC+TGG - chr1_4:61079539-61079558 None:intergenic 45.0%
GTAGATCTCGAGACAAGCAA+TGG - chr1_4:61079849-61079868 None:intergenic 45.0%
AGTGCATCAGAGAAGAGACA+CGG - chr1_4:61080009-61080028 None:intergenic 45.0%
TTCTCTGATGCACTTGCCAA+AGG + chr1_4:61080015-61080034 Msa0175210:intron 45.0%
GTTTGACCATTGTCCAACCA+AGG + chr1_4:61080135-61080154 Msa0175210:intron 45.0%
TTGACCATTGTCCAACCAAG+GGG + chr1_4:61080137-61080156 Msa0175210:intron 45.0%
! AATTTAAGACCCCCCTTGGT+TGG - chr1_4:61080151-61080170 None:intergenic 45.0%
AACCAAGGGGGGTCTTAAAT+TGG + chr1_4:61080150-61080169 Msa0175210:intron 45.0%
ACCAAGGGGGGTCTTAAATT+GGG + chr1_4:61080151-61080170 Msa0175210:intron 45.0%
ATTGGTCACACAATACGGAG+GGG - chr1_4:61080248-61080267 None:intergenic 45.0%
TTCCTCGACAACATAGCATC+CGG + chr1_4:61080315-61080334 Msa0175210:intron 45.0%
CTCAAGGTTTATCATGCACC+CGG - chr1_4:61080337-61080356 None:intergenic 45.0%
GCCAGGAATTGCTATGTTGA+AGG + chr1_4:61080365-61080384 Msa0175210:intron 45.0%
TCTACCATTAGCCAACCTGT+AGG + chr1_4:61080473-61080492 Msa0175210:intron 45.0%
CTTGAGGATTTCCTACAGGT+TGG - chr1_4:61080487-61080506 None:intergenic 45.0%
GACTCCAGAAGCTATTAGGA+AGG - chr1_4:61080747-61080766 None:intergenic 45.0%
GGAGGAGGTCATCAAGAAAA+GGG - chr1_4:61080790-61080809 None:intergenic 45.0%
AGGAGGAGGTCATCAAGAAA+AGG - chr1_4:61080791-61080810 None:intergenic 45.0%
AGAAACTGGATGTTCACAGG+AGG - chr1_4:61080808-61080827 None:intergenic 45.0%
TGCATGAGCGAAGATGGTGA+TGG - chr1_4:61079167-61079186 None:intergenic 50.0%
GAGCATGCATACTTGAGGTC+AGG - chr1_4:61079233-61079252 None:intergenic 50.0%
GGACTGTGCAGAAAAAGCTG+AGG + chr1_4:61079458-61079477 Msa0175210:CDS 50.0%
GAGAGTGGCTGGGTGAAAAT+GGG + chr1_4:61079488-61079507 Msa0175210:CDS 50.0%
AGAGTGGCTGGGTGAAAATG+GGG + chr1_4:61079489-61079508 Msa0175210:CDS 50.0%
GGTGTTAGTGGAGCGAAATC+TGG - chr1_4:61079518-61079537 None:intergenic 50.0%
! GAGACTAGCTGATGAAGACG+AGG + chr1_4:61079799-61079818 Msa0175210:intron 50.0%
CGAGGCCTTCGCTAAATTGT+AGG + chr1_4:61079817-61079836 Msa0175210:intron 50.0%
CGTGGCCTACAATTTAGCGA+AGG - chr1_4:61079825-61079844 None:intergenic 50.0%
AGAGGCAATAGGTCTGCTGA+AGG - chr1_4:61079939-61079958 None:intergenic 50.0%
! AGTGTTGAGGGAGAGGCAAT+AGG - chr1_4:61079950-61079969 None:intergenic 50.0%
! GTCTCATAGTGTTGAGGGAG+AGG - chr1_4:61079957-61079976 None:intergenic 50.0%
CACAGGCTGCAACACAGAAT+TGG - chr1_4:61080047-61080066 None:intergenic 50.0%
TTCCAGATGCAAAGCTGAGC+AGG + chr1_4:61080113-61080132 Msa0175210:intron 50.0%
AACCTGCTCAGCTTTGCATC+TGG - chr1_4:61080118-61080137 None:intergenic 50.0%
TGACCATTGTCCAACCAAGG+GGG + chr1_4:61080138-61080157 Msa0175210:intron 50.0%
! TCCCAATTTAAGACCCCCCT+TGG - chr1_4:61080155-61080174 None:intergenic 50.0%
TCCTCGACAACATAGCATCC+GGG + chr1_4:61080316-61080335 Msa0175210:intron 50.0%
CGGGTGCATGATAAACCTTG+AGG + chr1_4:61080335-61080354 Msa0175210:intron 50.0%
! AACCTTGAGGCTTGTTTGCC+AGG + chr1_4:61080348-61080367 Msa0175210:intron 50.0%
TTCCTGGCAAACAAGCCTCA+AGG - chr1_4:61080353-61080372 None:intergenic 50.0%
TGTTGCAGGAAGAGGGATTC+TGG + chr1_4:61080682-61080701 Msa0175210:intron 50.0%
AACTGGATGTTCACAGGAGG+AGG - chr1_4:61080805-61080824 None:intergenic 50.0%
TGCATGAGCGAAGATGGTGA+TGG - chr1_4:61079167-61079186 None:intergenic 50.0%
GAGCATGCATACTTGAGGTC+AGG - chr1_4:61079233-61079252 None:intergenic 50.0%
GGACTGTGCAGAAAAAGCTG+AGG + chr1_4:61079458-61079477 Msa0175210:CDS 50.0%
GAGAGTGGCTGGGTGAAAAT+GGG + chr1_4:61079488-61079507 Msa0175210:CDS 50.0%
AGAGTGGCTGGGTGAAAATG+GGG + chr1_4:61079489-61079508 Msa0175210:CDS 50.0%
GGTGTTAGTGGAGCGAAATC+TGG - chr1_4:61079518-61079537 None:intergenic 50.0%
! GAGACTAGCTGATGAAGACG+AGG + chr1_4:61079799-61079818 Msa0175210:intron 50.0%
CGAGGCCTTCGCTAAATTGT+AGG + chr1_4:61079817-61079836 Msa0175210:intron 50.0%
CGTGGCCTACAATTTAGCGA+AGG - chr1_4:61079825-61079844 None:intergenic 50.0%
AGAGGCAATAGGTCTGCTGA+AGG - chr1_4:61079939-61079958 None:intergenic 50.0%
! AGTGTTGAGGGAGAGGCAAT+AGG - chr1_4:61079950-61079969 None:intergenic 50.0%
! GTCTCATAGTGTTGAGGGAG+AGG - chr1_4:61079957-61079976 None:intergenic 50.0%
CACAGGCTGCAACACAGAAT+TGG - chr1_4:61080047-61080066 None:intergenic 50.0%
TTCCAGATGCAAAGCTGAGC+AGG + chr1_4:61080113-61080132 Msa0175210:intron 50.0%
AACCTGCTCAGCTTTGCATC+TGG - chr1_4:61080118-61080137 None:intergenic 50.0%
TGACCATTGTCCAACCAAGG+GGG + chr1_4:61080138-61080157 Msa0175210:intron 50.0%
! TCCCAATTTAAGACCCCCCT+TGG - chr1_4:61080155-61080174 None:intergenic 50.0%
TCCTCGACAACATAGCATCC+GGG + chr1_4:61080316-61080335 Msa0175210:intron 50.0%
CGGGTGCATGATAAACCTTG+AGG + chr1_4:61080335-61080354 Msa0175210:intron 50.0%
! AACCTTGAGGCTTGTTTGCC+AGG + chr1_4:61080348-61080367 Msa0175210:intron 50.0%
TTCCTGGCAAACAAGCCTCA+AGG - chr1_4:61080353-61080372 None:intergenic 50.0%
TGTTGCAGGAAGAGGGATTC+TGG + chr1_4:61080682-61080701 Msa0175210:intron 50.0%
AACTGGATGTTCACAGGAGG+AGG - chr1_4:61080805-61080824 None:intergenic 50.0%
!! GAAGATGGTGATGGTCGACG+GGG - chr1_4:61079158-61079177 None:intergenic 55.0%
!! CGAAGATGGTGATGGTCGAC+GGG - chr1_4:61079159-61079178 None:intergenic 55.0%
!! GCGAAGATGGTGATGGTCGA+CGG - chr1_4:61079160-61079179 None:intergenic 55.0%
! TCTGAAGCTACCAGCGCCAA+GGG - chr1_4:61079201-61079220 None:intergenic 55.0%
AGCTGAGGGAAACAGGAGAG+TGG + chr1_4:61079473-61079492 Msa0175210:CDS 55.0%
AGGGAAACAGGAGAGTGGCT+GGG + chr1_4:61079478-61079497 Msa0175210:CDS 55.0%
GGAGAGTGGCTGGGTGAAAA+TGG + chr1_4:61079487-61079506 Msa0175210:CDS 55.0%
CTCGAGACAAGCAATGGACG+TGG - chr1_4:61079843-61079862 None:intergenic 55.0%
!! GCGTGTTGGGTGGTTTGCTT+GGG - chr1_4:61079912-61079931 None:intergenic 55.0%
!! TGCGTGTTGGGTGGTTTGCT+TGG - chr1_4:61079913-61079932 None:intergenic 55.0%
AAGCAAACCACCCAACACGC+AGG + chr1_4:61079912-61079931 Msa0175210:intron 55.0%
AGCAAACCACCCAACACGCA+GGG + chr1_4:61079913-61079932 Msa0175210:intron 55.0%
GACCATTGTCCAACCAAGGG+GGG + chr1_4:61080139-61080158 Msa0175210:intron 55.0%
ACCCGGATGCTATGTTGTCG+AGG - chr1_4:61080320-61080339 None:intergenic 55.0%
!! GAAGATGGTGATGGTCGACG+GGG - chr1_4:61079158-61079177 None:intergenic 55.0%
!! CGAAGATGGTGATGGTCGAC+GGG - chr1_4:61079159-61079178 None:intergenic 55.0%
!! GCGAAGATGGTGATGGTCGA+CGG - chr1_4:61079160-61079179 None:intergenic 55.0%
! TCTGAAGCTACCAGCGCCAA+GGG - chr1_4:61079201-61079220 None:intergenic 55.0%
AGCTGAGGGAAACAGGAGAG+TGG + chr1_4:61079473-61079492 Msa0175210:CDS 55.0%
AGGGAAACAGGAGAGTGGCT+GGG + chr1_4:61079478-61079497 Msa0175210:CDS 55.0%
GGAGAGTGGCTGGGTGAAAA+TGG + chr1_4:61079487-61079506 Msa0175210:CDS 55.0%
CTCGAGACAAGCAATGGACG+TGG - chr1_4:61079843-61079862 None:intergenic 55.0%
!! GCGTGTTGGGTGGTTTGCTT+GGG - chr1_4:61079912-61079931 None:intergenic 55.0%
!! TGCGTGTTGGGTGGTTTGCT+TGG - chr1_4:61079913-61079932 None:intergenic 55.0%
AAGCAAACCACCCAACACGC+AGG + chr1_4:61079912-61079931 Msa0175210:intron 55.0%
AGCAAACCACCCAACACGCA+GGG + chr1_4:61079913-61079932 Msa0175210:intron 55.0%
GACCATTGTCCAACCAAGGG+GGG + chr1_4:61080139-61080158 Msa0175210:intron 55.0%
ACCCGGATGCTATGTTGTCG+AGG - chr1_4:61080320-61080339 None:intergenic 55.0%
! CGACGGGGAAGCTTGTTTGG+AGG - chr1_4:61079143-61079162 None:intergenic 60.0%
! GGTCGACGGGGAAGCTTGTT+TGG - chr1_4:61079146-61079165 None:intergenic 60.0%
ATTGAACGTGCCCTTGGCGC+TGG + chr1_4:61079188-61079207 Msa0175210:CDS 60.0%
!! CTCTGAAGCTACCAGCGCCA+AGG - chr1_4:61079202-61079221 None:intergenic 60.0%
!! GGCGCTGGTAGCTTCAGAGA+CGG + chr1_4:61079203-61079222 Msa0175210:CDS 60.0%
GAGGGAAACAGGAGAGTGGC+TGG + chr1_4:61079477-61079496 Msa0175210:CDS 60.0%
TGCTGAAGGCCCTGCGTGTT+GGG - chr1_4:61079925-61079944 None:intergenic 60.0%
GACCCCCCTTGGTTGGACAA+TGG - chr1_4:61080144-61080163 None:intergenic 60.0%
GGTCACACAATACGGAGGGG+AGG - chr1_4:61080245-61080264 None:intergenic 60.0%
! CGACGGGGAAGCTTGTTTGG+AGG - chr1_4:61079143-61079162 None:intergenic 60.0%
! GGTCGACGGGGAAGCTTGTT+TGG - chr1_4:61079146-61079165 None:intergenic 60.0%
ATTGAACGTGCCCTTGGCGC+TGG + chr1_4:61079188-61079207 Msa0175210:CDS 60.0%
!! CTCTGAAGCTACCAGCGCCA+AGG - chr1_4:61079202-61079221 None:intergenic 60.0%
!! GGCGCTGGTAGCTTCAGAGA+CGG + chr1_4:61079203-61079222 Msa0175210:CDS 60.0%
GAGGGAAACAGGAGAGTGGC+TGG + chr1_4:61079477-61079496 Msa0175210:CDS 60.0%
TGCTGAAGGCCCTGCGTGTT+GGG - chr1_4:61079925-61079944 None:intergenic 60.0%
GACCCCCCTTGGTTGGACAA+TGG - chr1_4:61080144-61080163 None:intergenic 60.0%
GGTCACACAATACGGAGGGG+AGG - chr1_4:61080245-61080264 None:intergenic 60.0%
TGAAGGCCCTGCGTGTTGGG+TGG - chr1_4:61079922-61079941 None:intergenic 65.0%
CTGCTGAAGGCCCTGCGTGT+TGG - chr1_4:61079926-61079945 None:intergenic 65.0%
TGAAGGCCCTGCGTGTTGGG+TGG - chr1_4:61079922-61079941 None:intergenic 65.0%
CTGCTGAAGGCCCTGCGTGT+TGG - chr1_4:61079926-61079945 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 61078852 61081014 61078852 ID=Msa0175210;Name=Msa0175210
chr1_4 mRNA 61078852 61081014 61078852 ID=Msa0175210-mRNA-1;Parent=Msa0175210;Name=Msa0175210-mRNA-1;_AED=0.06;_eAED=0.06;_QI=141|1|1|1|1|1|3|200|172
chr1_4 exon 61078852 61079240 61078852 ID=Msa0175210-mRNA-1:exon:19442;Parent=Msa0175210-mRNA-1
chr1_4 exon 61079393 61079538 61079393 ID=Msa0175210-mRNA-1:exon:19443;Parent=Msa0175210-mRNA-1
chr1_4 exon 61080690 61081014 61080690 ID=Msa0175210-mRNA-1:exon:19444;Parent=Msa0175210-mRNA-1
chr1_4 five_prime_UTR 61078852 61078992 61078852 ID=Msa0175210-mRNA-1:five_prime_utr;Parent=Msa0175210-mRNA-1
chr1_4 CDS 61078993 61079240 61078993 ID=Msa0175210-mRNA-1:cds;Parent=Msa0175210-mRNA-1
chr1_4 CDS 61079393 61079538 61079393 ID=Msa0175210-mRNA-1:cds;Parent=Msa0175210-mRNA-1
chr1_4 CDS 61080690 61080814 61080690 ID=Msa0175210-mRNA-1:cds;Parent=Msa0175210-mRNA-1
chr1_4 three_prime_UTR 61080815 61081014 61080815 ID=Msa0175210-mRNA-1:three_prime_utr;Parent=Msa0175210-mRNA-1
Gene Sequence

>Msa0175210

ATGTTTTGCTTATGCAACAATCTTTCTATAACCAAACCCATTCTTATTACTAATGCAACTCTTCCCCAAAACCCAGATTCTCCTTCTTCTTCACCCAAACAAACCAATCTTCCTTCACTAAGCTCCAAAAACTCCACTACTTCATTACCTCCAAACAAGCTTCCCCGTCGACCATCACCATCTTCGCTCATGCAAATTGAACGTGCCCTTGGCGCTGGTAGCTTCAGAGACGGTGAACCTGACCTCAAAATGAAGAACGATTCAGACGTAAAGAAGACCACGATGGATTTGTTCTTGGGACAAGTATTTGAAGGGACTGTGCAGAAAAAGCTGAGGGAAACAGGAGAGTGGCTGGGTGAAAATGGGGAGACCAGATTTCGCTCCACTAACACCAGAAGAGGGATTCTGGTGTTTGCATTTCAATGGATGATGCCAATTTGGGCTATATCCTTCCTAATAGCTTCTGGAGTCATCAATTTACCATTCAGTGTCCCTTTTCTTGATGACCTCCTCCTGTGA

Protein sequence

>Msa0175210

MFCLCNNLSITKPILITNATLPQNPDSPSSSPKQTNLPSLSSKNSTTSLPPNKLPRRPSPSSLMQIERALGAGSFRDGEPDLKMKNDSDVKKTTMDLFLGQVFEGTVQKKLRETGEWLGENGETRFRSTNTRRGILVFAFQWMMPIWAISFLIASGVINLPFSVPFLDDLLL*