Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586230 | XP_013454559.1 | 89.789 | 568 | 58 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1056 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586230 | sp|Q8LPJ4|AB2E_ARATH | 81.547 | 569 | 104 | 1 | 1 | 568 | 5 | 573 | 0.0 | 972 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586230 | A0A072URT6 | 89.789 | 568 | 58 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1056 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018610 | Msa0586230 | -0.802802 | 4.720293e-49 | -8.615850e-47 |
| Msa0127510 | Msa0586230 | -0.801074 | 1.068842e-48 | -8.615850e-47 |
| Msa0393880 | Msa0586230 | -0.802467 | 5.532446e-49 | -8.615850e-47 |
| Msa0347280 | Msa0586230 | -0.832539 | 8.921924e-56 | -8.615850e-47 |
| Msa0489330 | Msa0586230 | -0.830715 | 2.512533e-55 | -8.615850e-47 |
| Msa0586230 | Msa0664100 | 0.945449 | 2.990109e-104 | -8.615850e-47 |
| Msa0586230 | Msa0664140 | 0.937688 | 2.304334e-98 | -8.615850e-47 |
| Msa0586230 | Msa0699200 | -0.806421 | 8.294992e-50 | -8.615850e-47 |
| Msa0586230 | Msa0711860 | -0.804724 | 1.883137e-49 | -8.615850e-47 |
| Msa0586230 | Msa0745010 | -0.804926 | 1.708626e-49 | -8.615850e-47 |
| Msa0586230 | Msa0746830 | 0.817919 | 2.568596e-52 | -8.615850e-47 |
| Msa0586230 | Msa0784780 | -0.811455 | 6.942156e-51 | -8.615850e-47 |
| Msa0586230 | Msa0858250 | -0.800331 | 1.515370e-48 | -8.615850e-47 |
| Msa0586230 | Msa1037440 | -0.805348 | 1.393862e-49 | -8.615850e-47 |
| Msa0586230 | Msa1044460 | 0.935159 | 1.313243e-96 | -8.615850e-47 |
| Msa0586230 | Msa1058550 | -0.802028 | 6.812233e-49 | -8.615850e-47 |
| Msa0586230 | Msa1287100 | -0.807491 | 4.925974e-50 | -8.615850e-47 |
| Msa0586230 | Msa1295480 | -0.820399 | 7.002088e-53 | -8.615850e-47 |
| Msa0586230 | Msa1330080 | -0.801293 | 9.641316e-49 | -8.615850e-47 |
| Msa0586230 | Msa1462700 | -0.803705 | 3.068930e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586230 | MtrunA17_Chr4g0002101 | 89.789 | 568 | 58 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1056 |
| Msa0586230 | MtrunA17_Chr1g0211721 | 85.965 | 570 | 78 | 2 | 1 | 568 | 5 | 574 | 0.0 | 1014 |
| Msa0586230 | MtrunA17_Chr1g0156551 | 83.509 | 570 | 92 | 2 | 1 | 568 | 82 | 651 | 0.0 | 988 |
| Msa0586230 | MtrunA17_Chr1g0156441 | 81.092 | 238 | 43 | 2 | 327 | 562 | 16 | 253 | 8.56e-135 | 397 |
| Msa0586230 | MtrunA17_Chr1g0156441 | 31.466 | 232 | 129 | 6 | 99 | 324 | 59 | 266 | 3.02e-25 | 105 |
| Msa0586230 | MtrunA17_Chr1g0156461 | 67.857 | 196 | 62 | 1 | 3 | 198 | 8 | 202 | 1.93e-92 | 286 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586230 | AT4G19210.1 | 81.547 | 569 | 104 | 1 | 1 | 568 | 5 | 573 | 0.0 | 972 |
| Msa0586230 | AT3G13640.1 | 72.583 | 569 | 153 | 2 | 1 | 568 | 5 | 571 | 0.0 | 870 |
| Msa0586230 | AT4G30300.1 | 64.571 | 175 | 60 | 2 | 350 | 522 | 1 | 175 | 6.30e-66 | 216 |
| Msa0586230 | AT4G30300.1 | 25.140 | 179 | 100 | 5 | 100 | 265 | 21 | 178 | 4.47e-11 | 62.8 |
Find 183 sgRNAs with CRISPR-Local
Find 394 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAAGTTGGAGCCAAATT+TGG | 0.165233 | 4_2:-7342105 | Msa0586230:CDS |
| CGTAATGTTGGTGATCTTTC+AGG | 0.171930 | 4_2:-7340887 | Msa0586230:CDS |
| TATCAACTTGCCGGAGAATT+TGG | 0.186930 | 4_2:-7342365 | Msa0586230:CDS |
| GTCCACTGCCCTTAGAATTT+TGG | 0.194239 | 4_2:-7342129 | Msa0586230:CDS |
| AATGCAACAACTCAACAATT+TGG | 0.207468 | 4_2:-7337809 | Msa0586230:CDS |
| CAGTTGAATATTGGTGGTTT+GGG | 0.226415 | 4_2:-7342802 | Msa0586230:five_prime_UTR |
| TCATATCTCTCTCATTGTTT+TGG | 0.229197 | 4_2:+7340954 | None:intergenic |
| CCTGAACTTGCCTTGAGTTT+TGG | 0.246863 | 4_2:+7339902 | None:intergenic |
| ACTTTCCAGCCAAAATTCTA+AGG | 0.272957 | 4_2:+7342120 | None:intergenic |
| ATTATCTTTCAGTTGAATAT+TGG | 0.278478 | 4_2:-7342811 | Msa0586230:intron |
| CAACAGAAAATCTTAGGTTT+CGG | 0.282822 | 4_2:-7340452 | Msa0586230:CDS |
| TTGTTCCAACAGAAAATCTT+AGG | 0.290058 | 4_2:-7340458 | Msa0586230:CDS |
| ACAGTGAAACGACCCAAATT+TGG | 0.292894 | 4_2:+7342092 | None:intergenic |
| GATGAATTCTTTCATGTAAC+AGG | 0.293045 | 4_2:+7339586 | None:intergenic |
| TCAGTTGAATATTGGTGGTT+TGG | 0.296899 | 4_2:-7342803 | Msa0586230:intron |
| TCATCACATCTGATATAAAC+TGG | 0.305491 | 4_2:+7339547 | None:intergenic |
| AACAGAAAATCTTAGGTTTC+GGG | 0.307649 | 4_2:-7340451 | Msa0586230:CDS |
| ACTAGTTACAGAGCGGTAAA+AGG | 0.311457 | 4_2:-7343193 | None:intergenic |
| GACTTTATTTGCTGTTTGTA+TGG | 0.317741 | 4_2:-7340555 | Msa0586230:CDS |
| ACTAGAAAGGTGTGCCTTGC+CGG | 0.329398 | 4_2:+7343113 | None:intergenic |
| TCAAGGTAATAAACTAAAAC+TGG | 0.340272 | 4_2:+7337783 | None:intergenic |
| GGTCATTGCTAAGGCATAAT+AGG | 0.365075 | 4_2:-7340742 | Msa0586230:intron |
| CTGTGTAGCTTAAAAGTATT+AGG | 0.366567 | 4_2:+7342316 | None:intergenic |
| GAACCAAGTTTGTTGATCCT+TGG | 0.372441 | 4_2:+7337990 | None:intergenic |
| AACCAAGTTTGTTGATCCTT+GGG | 0.373348 | 4_2:+7337991 | None:intergenic |
| CTTTCGAGATGAGAGTTTGA+AGG | 0.373390 | 4_2:-7341906 | Msa0586230:intron |
| TAACAGTTGATTTGAACTTT+GGG | 0.374527 | 4_2:+7339613 | None:intergenic |
| CTAACAGTTGATTTGAACTT+TGG | 0.376761 | 4_2:+7339612 | None:intergenic |
| CGCCCAAGGATCAACAAACT+TGG | 0.378870 | 4_2:-7337993 | Msa0586230:CDS |
| CGTTGCCCTGTCGTCATAAC+CGG | 0.380336 | 4_2:-7342705 | Msa0586230:intron |
| GATAGAGAGCAAAAGCTTGC+TGG | 0.383710 | 4_2:-7337960 | Msa0586230:CDS |
| TTGAGAAAGATGGCTTCAAC+AGG | 0.384287 | 4_2:+7337576 | None:intergenic |
| TGTAGTTGGAGGAGAATTTA+CGG | 0.386210 | 4_2:-7339874 | Msa0586230:CDS |
| ATTGATCACATTCATAAAAC+GGG | 0.386877 | 4_2:-7341004 | Msa0586230:CDS |
| AATTAAGATTATCAACTTGC+CGG | 0.388066 | 4_2:-7342374 | Msa0586230:CDS |
| GGAAAGTTGGAGCCAAATTT+GGG | 0.390741 | 4_2:-7342104 | Msa0586230:CDS |
| ATGTTGCTCATGGTCAGTTT+TGG | 0.392253 | 4_2:-7337475 | Msa0586230:CDS |
| GTCAAAATTTCCTGCCAGTC+AGG | 0.392453 | 4_2:+7341968 | None:intergenic |
| TGCAGCAATAATACGCTGTT+CGG | 0.396922 | 4_2:+7338367 | None:intergenic |
| GCTTATTACGCAGTTTATAT+CGG | 0.397301 | 4_2:-7337430 | Msa0586230:three_prime_UTR |
| TGACAGAGTTATTGTTTATG+AGG | 0.398914 | 4_2:-7338261 | Msa0586230:CDS |
| CAACAGCAATGGCAAACCTT+TGG | 0.402310 | 4_2:+7340855 | None:intergenic |
| GACATCAAATAAATTAAAAC+TGG | 0.409077 | 4_2:+7337614 | None:intergenic |
| AGCAACATCGCTAAGTATTA+CGG | 0.412171 | 4_2:+7337490 | None:intergenic |
| CCGAGGCCGGGGAAAGTGCT+TGG | 0.412378 | 4_2:-7342179 | Msa0586230:CDS |
| ACTTTCCCCGGCCTCGGAAC+CGG | 0.412394 | 4_2:+7342185 | None:intergenic |
| GGGAAAGTGCTTGGTTTGGT+TGG | 0.414362 | 4_2:-7342170 | Msa0586230:CDS |
| AGTTGTGTATTATAGGTTGC+CGG | 0.415419 | 4_2:-7342204 | Msa0586230:intron |
| TATAATACAGGTTAGCTTCA+AGG | 0.416213 | 4_2:-7341035 | Msa0586230:intron |
| ATCCTTGGGCGGAAATTAGT+TGG | 0.419970 | 4_2:+7338005 | None:intergenic |
| TGCAAAGAAAACAGCCTTTG+TGG | 0.420036 | 4_2:-7338318 | Msa0586230:CDS |
| CCAAAACTCAAGGCAAGTTC+AGG | 0.420940 | 4_2:-7339902 | Msa0586230:CDS |
| AGGTTGCCGGTTCCGAGGCC+GGG | 0.422004 | 4_2:-7342191 | Msa0586230:CDS |
| GCCGGGGAAAGTGCTTGGTT+TGG | 0.422861 | 4_2:-7342174 | Msa0586230:CDS |
| ATGCAACAACTCAACAATTT+GGG | 0.423564 | 4_2:-7337808 | Msa0586230:CDS |
| GGAATTAATATCTTCTTGTC+TGG | 0.423856 | 4_2:-7340483 | Msa0586230:CDS |
| TCTATATCCATTGAGAAAGA+TGG | 0.425133 | 4_2:+7337566 | None:intergenic |
| ATAATCTTAATTGCTTCAAA+AGG | 0.425895 | 4_2:+7342385 | None:intergenic |
| GGAAAGTGCTTGGTTTGGTT+GGG | 0.426497 | 4_2:-7342169 | Msa0586230:CDS |
| TATTGATCACATTCATAAAA+CGG | 0.431274 | 4_2:-7341005 | Msa0586230:CDS |
| GTTTCCTTATGTCTTTGTCT+TGG | 0.432752 | 4_2:-7339456 | Msa0586230:CDS |
| GGATGACTCTCTTACCTTCA+AGG | 0.434243 | 4_2:-7340430 | Msa0586230:intron |
| TAGGTTGCCGGTTCCGAGGC+CGG | 0.434876 | 4_2:-7342192 | Msa0586230:CDS |
| ATTCCTTCTCTGACTGAGAA+AGG | 0.437002 | 4_2:+7340501 | None:intergenic |
| ATAGATTATTTATACCTTGA+AGG | 0.440136 | 4_2:+7340416 | None:intergenic |
| GTAATGTTGGTGATCTTTCA+GGG | 0.441278 | 4_2:-7340886 | Msa0586230:CDS |
| TCTCCACAATCACTGCTGAC+TGG | 0.442692 | 4_2:-7338209 | Msa0586230:CDS |
| ATCTTTCAGTTGAATATTGG+TGG | 0.443272 | 4_2:-7342808 | Msa0586230:intron |
| TTACCTTGATGACTAAGTTC+AGG | 0.448177 | 4_2:-7337928 | Msa0586230:intron |
| TCTCAGATTGTTGTTATGCT+TGG | 0.451315 | 4_2:-7339849 | Msa0586230:CDS |
| GTTGTTATGCTTGGTGAGAA+TGG | 0.453138 | 4_2:-7339840 | Msa0586230:CDS |
| TGAACACGATCTTAGTGTCT+TGG | 0.458360 | 4_2:-7340589 | Msa0586230:CDS |
| CTTATGTCTTTGTCTTGGAA+AGG | 0.458540 | 4_2:-7339451 | Msa0586230:intron |
| TGGATGTGGTATTTGTGTTA+AGG | 0.458616 | 4_2:-7342517 | Msa0586230:intron |
| AAAGGTGTGCCTTGCCGGAC+GGG | 0.459595 | 4_2:+7343118 | None:intergenic |
| AAAGACACCACTCATAGATA+TGG | 0.460544 | 4_2:-7342340 | Msa0586230:CDS |
| TGTTGCATTGGCAAAAGAGC+AGG | 0.462602 | 4_2:+7337823 | None:intergenic |
| GTTTGCAGAACCCTCCTGAC+TGG | 0.466184 | 4_2:-7341982 | Msa0586230:intron |
| CTCCACAATCACTGCTGACT+GGG | 0.473425 | 4_2:-7338208 | Msa0586230:CDS |
| GCAGAACCCTCCTGACTGGC+AGG | 0.473883 | 4_2:-7341978 | Msa0586230:intron |
| GTTGAAGCCATCTTTCTCAA+TGG | 0.474658 | 4_2:-7337573 | Msa0586230:CDS |
| TATGGAACACCTGGTGCATA+TGG | 0.475475 | 4_2:-7340537 | Msa0586230:CDS |
| ACGCGTATTGCCATTGTCAA+TGG | 0.480880 | 4_2:-7342771 | Msa0586230:CDS |
| CATGCAGAGCATATGTTGGT+TGG | 0.482533 | 4_2:-7337530 | Msa0586230:CDS |
| CTCACATCAAGATAACTAGA+AGG | 0.483153 | 4_2:+7340794 | None:intergenic |
| TTTGCAGTACAGTCAATTGA+AGG | 0.483786 | 4_2:+7338233 | None:intergenic |
| GCCGTCGCACCTTTCCCGTC+CGG | 0.484145 | 4_2:-7343132 | Msa0586230:five_prime_UTR |
| CTCTCTCTCTATTCACCGAC+AGG | 0.488866 | 4_2:-7343081 | Msa0586230:intron |
| AACTTTGGGTTAATTGTCTG+AGG | 0.488966 | 4_2:+7339627 | None:intergenic |
| ACCAAACCAAGCACTTTCCC+CGG | 0.489846 | 4_2:+7342173 | None:intergenic |
| ATCATACCGGTTATGACGAC+AGG | 0.490261 | 4_2:+7342699 | None:intergenic |
| TGAAAGCTGCCCAAGTTGTC+CGG | 0.491384 | 4_2:-7340763 | Msa0586230:CDS |
| TGCTGTTTGTATGGAACACC+TGG | 0.492329 | 4_2:-7340546 | Msa0586230:CDS |
| TGTTGCATTGGCAAAAGAGC+AGG | 0.493165 | 4_2:+7337656 | None:intergenic |
| GTGTCTTTGTCCAAATTCTC+CGG | 0.498181 | 4_2:+7342355 | None:intergenic |
| TATAGGAAGATTGTGTATTG+AGG | 0.500669 | 4_2:-7342586 | Msa0586230:intron |
| ATAAATTATGAGAGCTGAGA+TGG | 0.501113 | 4_2:+7337347 | None:intergenic |
| TTGTTATGCTTGGTGAGAAT+GGG | 0.504018 | 4_2:-7339839 | Msa0586230:CDS |
| AAGTTCAGGCTTCGTGTAGT+TGG | 0.505597 | 4_2:-7339888 | Msa0586230:CDS |
| GGTTGCCGGTTCCGAGGCCG+GGG | 0.505721 | 4_2:-7342190 | Msa0586230:CDS |
| AAACAATGAGAGAGATATGA+AGG | 0.508578 | 4_2:-7340951 | Msa0586230:CDS |
| CACATTCATAAAACGGGGCA+AGG | 0.508774 | 4_2:-7340998 | Msa0586230:CDS |
| TACGCAGTTTATATCGGTCA+TGG | 0.509673 | 4_2:-7337424 | Msa0586230:three_prime_UTR |
| TAACACATACTGATAAGAAA+AGG | 0.514344 | 4_2:+7338180 | None:intergenic |
| GACAACATTCATCCGTATGC+TGG | 0.519437 | 4_2:-7339808 | Msa0586230:intron |
| TTCAGGCTTCGTGTAGTTGG+AGG | 0.519982 | 4_2:-7339885 | Msa0586230:CDS |
| TAAAACGGGGCAAGGGAACG+TGG | 0.521293 | 4_2:-7340990 | Msa0586230:CDS |
| TCAGATCCACCTATAGTGTC+AGG | 0.525068 | 4_2:+7339684 | None:intergenic |
| AGCCAAAATTCTAAGGGCAG+TGG | 0.528739 | 4_2:+7342127 | None:intergenic |
| ATAGAGAGCAAAAGCTTGCT+GGG | 0.529331 | 4_2:-7337959 | Msa0586230:CDS |
| TCTATCAGATAAATGTCTGC+AGG | 0.531946 | 4_2:+7338413 | None:intergenic |
| TGTGCCTTGCCGGACGGGAA+AGG | 0.532065 | 4_2:+7343123 | None:intergenic |
| CGGCGCAATCGCAAGGAGAG+TGG | 0.533803 | 4_2:+7343151 | None:intergenic |
| CTTTCCAAGACAAAGACATA+AGG | 0.539595 | 4_2:+7339452 | None:intergenic |
| TTAGCAATGACCGGACAACT+TGG | 0.539932 | 4_2:+7340753 | None:intergenic |
| CGCACCTTTCCCGTCCGGCA+AGG | 0.539935 | 4_2:-7343127 | Msa0586230:five_prime_UTR |
| TCATTGAAACCTGACACTAT+AGG | 0.540340 | 4_2:-7339693 | Msa0586230:CDS |
| CAAGTTATAGATCGTAATGT+TGG | 0.541369 | 4_2:-7340899 | Msa0586230:CDS |
| GACAGAGTTATTGTTTATGA+GGG | 0.542830 | 4_2:-7338260 | Msa0586230:CDS |
| CATCACATCTGATATAAACT+GGG | 0.543431 | 4_2:+7339548 | None:intergenic |
| CTTCCTTTCTCAGTCAGAGA+AGG | 0.543896 | 4_2:-7340504 | Msa0586230:CDS |
| CCAAGCACTTTCCCCGGCCT+CGG | 0.544800 | 4_2:+7342179 | None:intergenic |
| GAAAGGTGTGCCTTGCCGGA+CGG | 0.547606 | 4_2:+7343117 | None:intergenic |
| ACATCCAGTGCACAATTCCT+CGG | 0.548548 | 4_2:+7342533 | None:intergenic |
| ATCCCAGTCAGCAGTGATTG+TGG | 0.548844 | 4_2:+7338206 | None:intergenic |
| ACTACTTATCGAACAGCTGA+TGG | 0.549716 | 4_2:-7339520 | Msa0586230:CDS |
| AAACCTGAACTTAGTCATCA+AGG | 0.550955 | 4_2:+7337925 | None:intergenic |
| GGTGCGACGGCGCAATCGCA+AGG | 0.553576 | 4_2:+7343144 | None:intergenic |
| AAAACGGGGCAAGGGAACGT+GGG | 0.554809 | 4_2:-7340989 | Msa0586230:CDS |
| AGAGGACGGTGAAACTAGAA+AGG | 0.558715 | 4_2:+7343100 | None:intergenic |
| TTGCTGCAAAAGTTATCAAG+AGG | 0.559789 | 4_2:-7338352 | Msa0586230:CDS |
| TGCGTAATAAGCAGATTCAC+TGG | 0.561452 | 4_2:+7337441 | None:intergenic |
| CTATCCGAGGAATTGTGCAC+TGG | 0.564876 | 4_2:-7342537 | Msa0586230:CDS |
| TGAGCTTCAGCAGTTTCATG+TGG | 0.568344 | 4_2:+7339957 | None:intergenic |
| AAATTGTTGAGATGTTGCAT+TGG | 0.572373 | 4_2:+7337644 | None:intergenic |
| CTTTCCAGCCAAAATTCTAA+GGG | 0.572535 | 4_2:+7342121 | None:intergenic |
| GCTGCATGCAGAGCATATGT+TGG | 0.573386 | 4_2:-7337534 | Msa0586230:CDS |
| ATACTTAGCGATGTTGCTCA+TGG | 0.577580 | 4_2:-7337485 | Msa0586230:CDS |
| ATCCAACTAATTTCCGCCCA+AGG | 0.577928 | 4_2:-7338007 | Msa0586230:CDS |
| AAATTGTTGAGTTGTTGCAT+TGG | 0.580429 | 4_2:+7337811 | None:intergenic |
| CACTATAGGTGGATCTGATG+TGG | 0.580575 | 4_2:-7339679 | Msa0586230:CDS |
| AAGTTGTCCGGTCATTGCTA+AGG | 0.581006 | 4_2:-7340751 | Msa0586230:CDS |
| CGCAATCGCAAGGAGAGTGG+AGG | 0.581707 | 4_2:+7343154 | None:intergenic |
| TATTATGCCTTAGCAATGAC+CGG | 0.582030 | 4_2:+7340744 | None:intergenic |
| CAGTGCACAATTCCTCGGAT+AGG | 0.583504 | 4_2:+7342538 | None:intergenic |
| TTGTGTGAAATATTGAACTC+AGG | 0.583680 | 4_2:+7339651 | None:intergenic |
| AAAATTTCCTGCCAGTCAGG+AGG | 0.583757 | 4_2:+7341971 | None:intergenic |
| TCGGAATCAAGATGTGCACT+TGG | 0.586777 | 4_2:+7338386 | None:intergenic |
| TAGCAATGACCGGACAACTT+GGG | 0.588276 | 4_2:+7340754 | None:intergenic |
| ACTAAAAGAATACCAGCATA+CGG | 0.589186 | 4_2:+7339796 | None:intergenic |
| ATCAGCTGTTCGATAAGTAG+TGG | 0.593241 | 4_2:+7339522 | None:intergenic |
| ATGGCGATAAACTTAATATG+TGG | 0.593735 | 4_2:+7337366 | None:intergenic |
| AGTTGAATATTGGTGGTTTG+GGG | 0.595891 | 4_2:-7342801 | Msa0586230:five_prime_UTR |
| GAGGAATTGTGCACTGGATG+TGG | 0.596595 | 4_2:-7342531 | Msa0586230:CDS |
| TAGGAGGGCAGCAACAGCAA+TGG | 0.601333 | 4_2:+7340844 | None:intergenic |
| AAATTTCCTGCCAGTCAGGA+GGG | 0.605918 | 4_2:+7341972 | None:intergenic |
| ATTATAGGTTGCCGGTTCCG+AGG | 0.606131 | 4_2:-7342196 | Msa0586230:intron |
| CAAGTTTGTTGATCCTTGGG+CGG | 0.607651 | 4_2:+7337994 | None:intergenic |
| CTGTCGGTGAATAGAGAGAG+AGG | 0.609135 | 4_2:+7343082 | None:intergenic |
| ATGCTTGGTGAGAATGGGAC+GGG | 0.610087 | 4_2:-7339834 | Msa0586230:CDS |
| TAATGTTGGTGATCTTTCAG+GGG | 0.618828 | 4_2:-7340885 | Msa0586230:CDS |
| GGTTGAGCATGATTTCATCA+TGG | 0.619459 | 4_2:-7338297 | Msa0586230:CDS |
| GCCGGACGGGAAAGGTGCGA+CGG | 0.621346 | 4_2:+7343131 | None:intergenic |
| GTGGCATCATTATTCAGTCA+AGG | 0.625338 | 4_2:+7337385 | None:intergenic |
| AAACGGGGCAAGGGAACGTG+GGG | 0.627128 | 4_2:-7340988 | Msa0586230:CDS |
| GCATCTGTCTCCATTGACAA+TGG | 0.633618 | 4_2:+7342761 | None:intergenic |
| GCAATCGCAAGGAGAGTGGA+GGG | 0.634318 | 4_2:+7343155 | None:intergenic |
| ACATTCATAAAACGGGGCAA+GGG | 0.634571 | 4_2:-7340997 | Msa0586230:CDS |
| TTGAAACCTGACACTATAGG+TGG | 0.643934 | 4_2:-7339690 | Msa0586230:CDS |
| GAAATCATGCTCAACCACAA+AGG | 0.644019 | 4_2:+7338304 | None:intergenic |
| CGGTGAATAGAGAGAGAGGA+CGG | 0.653776 | 4_2:+7343086 | None:intergenic |
| AATGTTGGTGATCTTTCAGG+GGG | 0.657975 | 4_2:-7340884 | Msa0586230:CDS |
| CCAACCATGACCAAAACTCA+AGG | 0.658017 | 4_2:-7339912 | Msa0586230:CDS |
| GAAGATTGCTTACCTATCCG+AGG | 0.658534 | 4_2:-7342550 | Msa0586230:CDS |
| GTTACGACTCCATATGCACC+AGG | 0.659399 | 4_2:+7340528 | None:intergenic |
| ATTAGGACCATATCTATGAG+TGG | 0.668366 | 4_2:+7342333 | None:intergenic |
| CAACAAACTTGGTTCAACCA+AGG | 0.671800 | 4_2:-7337982 | Msa0586230:CDS |
| GTTATCTTGATGTGAGACAG+AGG | 0.675184 | 4_2:-7340787 | Msa0586230:CDS |
| TATGCTTGGTGAGAATGGGA+CGG | 0.683302 | 4_2:-7339835 | Msa0586230:CDS |
| ATCACATCTGATATAAACTG+GGG | 0.688133 | 4_2:+7339549 | None:intergenic |
| TGAGAAAGATGGCTTCAACA+GGG | 0.694330 | 4_2:+7337577 | None:intergenic |
| TCATACCGGTTATGACGACA+GGG | 0.697152 | 4_2:+7342700 | None:intergenic |
| TTGATCACATTCATAAAACG+GGG | 0.709656 | 4_2:-7341003 | Msa0586230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTAAAAAAAAAAATTAC+TGG | + | chr4_2:7338726-7338745 | None:intergenic | 10.0% |
| !! | ATTACATAATAATTGATAAA+TGG | + | chr4_2:7338776-7338795 | None:intergenic | 10.0% |
| !! | ATTTATCAATTATTATGTAA+TGG | - | chr4_2:7338775-7338794 | Msa0586230:intron | 10.0% |
| !!! | AAAATGTTTTTCAAAATTAA+AGG | + | chr4_2:7339281-7339300 | None:intergenic | 10.0% |
| !! | TATTCTTATAAATTAGATAT+TGG | - | chr4_2:7340419-7340438 | Msa0586230:intron | 10.0% |
| !! | GAATTCAATTAATATTTATA+TGG | + | chr4_2:7341874-7341893 | None:intergenic | 10.0% |
| !!! | TGAAATTTTATGTTAATGTT+TGG | - | chr4_2:7337848-7337867 | Msa0586230:intron | 15.0% |
| !!! | AAAAAAAAAAAGGCTAATTT+TGG | + | chr4_2:7338439-7338458 | None:intergenic | 15.0% |
| !! | ACGGTATAAAAAAAAAAAAA+AGG | + | chr4_2:7338449-7338468 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTATACCG+TGG | - | chr4_2:7338448-7338467 | Msa0586230:intron | 15.0% |
| !! | TACAAAACGATATTAAATAA+AGG | + | chr4_2:7338632-7338651 | None:intergenic | 15.0% |
| !!! | GTTTTTCTGATTTTTTTTAT+TGG | - | chr4_2:7338749-7338768 | Msa0586230:intron | 15.0% |
| !! | TTCAATATATGTTATAATAC+AGG | - | chr4_2:7339453-7339472 | Msa0586230:CDS | 15.0% |
| !!! | TTTTTATTCAAATAAACTCA+TGG | - | chr4_2:7340278-7340297 | Msa0586230:intron | 15.0% |
| !!! | AAAAGTTCTAACAAAATATA+AGG | + | chr4_2:7340360-7340379 | None:intergenic | 15.0% |
| !!! | ATAAGAATATTTTCATTTTG+AGG | + | chr4_2:7340408-7340427 | None:intergenic | 15.0% |
| !!! | TGATTTTTTATGATTTGTTA+TGG | - | chr4_2:7341275-7341294 | Msa0586230:intron | 15.0% |
| !!! | TCATATTTTAACAAAAAGAT+AGG | + | chr4_2:7341436-7341455 | None:intergenic | 15.0% |
| !!! | TCTTTTTGTTAAAATATGAT+TGG | - | chr4_2:7341437-7341456 | Msa0586230:intron | 15.0% |
| !! | TCAAATGAAAATATTGATAA+TGG | - | chr4_2:7341682-7341701 | Msa0586230:intron | 15.0% |
| !!! | CAAATGAAAATATTGATAAT+GGG | - | chr4_2:7341683-7341702 | Msa0586230:intron | 15.0% |
| !!! | TATGTGTTATTATTTTTCAA+TGG | - | chr4_2:7342334-7342353 | Msa0586230:CDS | 15.0% |
| !!! | TGAATTTATGTTTTTACGAT+AGG | - | chr4_2:7337500-7337519 | Msa0586230:CDS | 20.0% |
| !! | ATTATCTTTCAGTTGAATAT+TGG | - | chr4_2:7337689-7337708 | Msa0586230:intron | 20.0% |
| !! | ATAATCTTAATTGCTTCAAA+AGG | + | chr4_2:7338118-7338137 | None:intergenic | 20.0% |
| !!! | CATATTAACACAGAATTTTT+AGG | + | chr4_2:7338232-7338251 | None:intergenic | 20.0% |
| !!! | AGGAAATTTTGACTTATTAT+CGG | - | chr4_2:7338542-7338561 | Msa0586230:intron | 20.0% |
| !!! | TATCTTATTGATTTAGACTT+TGG | - | chr4_2:7338664-7338683 | Msa0586230:intron | 20.0% |
| !! | TAGAATTTCTTTAATTGAGA+AGG | - | chr4_2:7338824-7338843 | Msa0586230:intron | 20.0% |
| !! | AGAATTTCTTTAATTGAGAA+GGG | - | chr4_2:7338825-7338844 | Msa0586230:intron | 20.0% |
| !!! | ATGTTTATTTCTACATTACA+AGG | + | chr4_2:7339166-7339185 | None:intergenic | 20.0% |
| !! | TATTGATCACATTCATAAAA+CGG | - | chr4_2:7339495-7339514 | Msa0586230:CDS | 20.0% |
| !! | ATAGATTATTTATACCTTGA+AGG | + | chr4_2:7340087-7340106 | None:intergenic | 20.0% |
| !!! | ATTCAGAAACCAAATATTTT+CGG | + | chr4_2:7340255-7340274 | None:intergenic | 20.0% |
| !!! | TTGTTAGAACTTTTAGATAT+TGG | - | chr4_2:7340366-7340385 | Msa0586230:intron | 20.0% |
| !! | TTTGTTAAAATATGATTGGA+TGG | - | chr4_2:7341441-7341460 | Msa0586230:intron | 20.0% |
| !!! | CTATTTCGTTTGAAATAAAT+AGG | + | chr4_2:7342023-7342042 | None:intergenic | 20.0% |
| !! | GACATCAAATAAATTAAAAC+TGG | + | chr4_2:7342889-7342908 | None:intergenic | 20.0% |
| ! | ATGATTATGCGTGTAATTAT+AGG | - | chr4_2:7337897-7337916 | Msa0586230:intron | 25.0% |
| ! | AATTAAGATTATCAACTTGC+CGG | - | chr4_2:7338126-7338145 | Msa0586230:intron | 25.0% |
| !!! | GGAAATTTTGACTTATTATC+GGG | - | chr4_2:7338543-7338562 | Msa0586230:intron | 25.0% |
| !!! | GAAATTTTGACTTATTATCG+GGG | - | chr4_2:7338544-7338563 | Msa0586230:intron | 25.0% |
| ! | CAATTATTATGTAATGGTAG+AGG | - | chr4_2:7338781-7338800 | Msa0586230:intron | 25.0% |
| ! | AAGAAATTCTACAACACTAT+AGG | + | chr4_2:7338815-7338834 | None:intergenic | 25.0% |
| ! | TATCTATCTATCTATCTATG+CGG | + | chr4_2:7339047-7339066 | None:intergenic | 25.0% |
| !! | TAGATAGATAATCTTTGAAG+AGG | - | chr4_2:7339061-7339080 | Msa0586230:intron | 25.0% |
| ! | TGCACATTCAGAAAAATATA+AGG | + | chr4_2:7339335-7339354 | None:intergenic | 25.0% |
| ! | ATTGATCACATTCATAAAAC+GGG | - | chr4_2:7339496-7339515 | Msa0586230:CDS | 25.0% |
| ! | AAATTCAGATTTATCTTGAC+TGG | + | chr4_2:7339855-7339874 | None:intergenic | 25.0% |
| !!! | TGGCTTTATATTCCATAAAT+GGG | + | chr4_2:7340119-7340138 | None:intergenic | 25.0% |
| !!! | TTGGCTTTATATTCCATAAA+TGG | + | chr4_2:7340120-7340139 | None:intergenic | 25.0% |
| ! | TATGGAATATAAAGCCAATT+TGG | - | chr4_2:7340122-7340141 | Msa0586230:intron | 25.0% |
| ! | ATGGAATATAAAGCCAATTT+GGG | - | chr4_2:7340123-7340142 | Msa0586230:intron | 25.0% |
| !! | ACTTTTCTCAATTCTATTGT+TGG | + | chr4_2:7340228-7340247 | None:intergenic | 25.0% |
| !!! | TAACAGTTGATTTGAACTTT+GGG | + | chr4_2:7340890-7340909 | None:intergenic | 25.0% |
| !!! | AAAGAAGTTTTGAATCTTTC+TGG | - | chr4_2:7341005-7341024 | Msa0586230:CDS | 25.0% |
| ! | TAAAAAGGAAAGAAAAAGCA+GGG | + | chr4_2:7341138-7341157 | None:intergenic | 25.0% |
| ! | AGCTATTCAAGAATGTAAAA+AGG | + | chr4_2:7341153-7341172 | None:intergenic | 25.0% |
| !!! | TATTTTGGGCTAGTTTTTTT+AGG | - | chr4_2:7341386-7341405 | Msa0586230:intron | 25.0% |
| !! | AAAAGATAGGCCATATTTTT+GGG | + | chr4_2:7341423-7341442 | None:intergenic | 25.0% |
| !! | AAAAAGATAGGCCATATTTT+TGG | + | chr4_2:7341424-7341443 | None:intergenic | 25.0% |
| !! | AAAAAAAACCGAGTGTATTT+TGG | - | chr4_2:7341748-7341767 | Msa0586230:intron | 25.0% |
| !! | AAAAAAACCGAGTGTATTTT+GGG | - | chr4_2:7341749-7341768 | Msa0586230:intron | 25.0% |
| !!! | TATTTTGGGCTAGTTTTTTT+AGG | - | chr4_2:7341386-7341405 | Msa0586230:intron | 25.0% |
| ! | ATTGAATTCCTTATCCATTA+CGG | - | chr4_2:7341885-7341904 | Msa0586230:intron | 25.0% |
| !!! | ATTTTTAGAACTATACCTCT+TGG | - | chr4_2:7341958-7341977 | Msa0586230:CDS | 25.0% |
| ! | TCAAGGTAATAAACTAAAAC+TGG | + | chr4_2:7342720-7342739 | None:intergenic | 25.0% |
| ATCTTTCAGTTGAATATTGG+TGG | - | chr4_2:7337692-7337711 | Msa0586230:intron | 30.0% | |
| TATAGGAAGATTGTGTATTG+AGG | - | chr4_2:7337914-7337933 | Msa0586230:intron | 30.0% | |
| !! | ATTTGTGTTAAGGTATTGAG+AGG | - | chr4_2:7337993-7338012 | Msa0586230:CDS | 30.0% |
| !! | CTGTGTAGCTTAAAAGTATT+AGG | + | chr4_2:7338187-7338206 | None:intergenic | 30.0% |
| ! | CTAATACTTTTAAGCTACAC+AGG | - | chr4_2:7338185-7338204 | Msa0586230:CDS | 30.0% |
| TCAAGAGAGTTGTGTATTAT+AGG | - | chr4_2:7338289-7338308 | Msa0586230:CDS | 30.0% | |
| !!! | TTTTTTTTTATACCGTGGAG+TGG | - | chr4_2:7338453-7338472 | Msa0586230:intron | 30.0% |
| !! | CTTATTGATTTAGACTTTGG+TGG | - | chr4_2:7338667-7338686 | Msa0586230:intron | 30.0% |
| ATGTTGACGTTTCATTAACT+GGG | - | chr4_2:7338870-7338889 | Msa0586230:intron | 30.0% | |
| AAAAGCGATACACTAATTCA+TGG | - | chr4_2:7338934-7338953 | Msa0586230:intron | 30.0% | |
| ! | ATAGATAATCTTTGAAGAGG+TGG | - | chr4_2:7339064-7339083 | Msa0586230:intron | 30.0% |
| ! | TAGATAATCTTTGAAGAGGT+GGG | - | chr4_2:7339065-7339084 | Msa0586230:intron | 30.0% |
| AACAGTATCAAAGTTGAACT+CGG | + | chr4_2:7339099-7339118 | None:intergenic | 30.0% | |
| ! | ACTGCAGTACTTTTATGATA+TGG | + | chr4_2:7339127-7339146 | None:intergenic | 30.0% |
| AGTACTGCAGTAATACAAAT+TGG | - | chr4_2:7339136-7339155 | Msa0586230:intron | 30.0% | |
| ATATAAGGACAACAAATGCT+AGG | + | chr4_2:7339320-7339339 | None:intergenic | 30.0% | |
| ! | TTAAGAAAGGTTCTTCCTTT+TGG | - | chr4_2:7339414-7339433 | Msa0586230:intron | 30.0% |
| TAAGCACATTAGAAACCAAA+AGG | + | chr4_2:7339432-7339451 | None:intergenic | 30.0% | |
| !! | TATAATACAGGTTAGCTTCA+AGG | - | chr4_2:7339465-7339484 | Msa0586230:CDS | 30.0% |
| TTGATCACATTCATAAAACG+GGG | - | chr4_2:7339497-7339516 | Msa0586230:CDS | 30.0% | |
| ! | TCATATCTCTCTCATTGTTT+TGG | + | chr4_2:7339549-7339568 | None:intergenic | 30.0% |
| AAACAATGAGAGAGATATGA+AGG | - | chr4_2:7339549-7339568 | Msa0586230:CDS | 30.0% | |
| CAAGTTATAGATCGTAATGT+TGG | - | chr4_2:7339601-7339620 | Msa0586230:CDS | 30.0% | |
| ! | ACATGTATATCTCAGCTTTT+AGG | + | chr4_2:7339678-7339697 | None:intergenic | 30.0% |
| TTTATCTTGACTGGAAATCA+AGG | + | chr4_2:7339846-7339865 | None:intergenic | 30.0% | |
| TTCAACAACAATTACATAGC+TGG | + | chr4_2:7339895-7339914 | None:intergenic | 30.0% | |
| !! | GACTTTATTTGCTGTTTGTA+TGG | - | chr4_2:7339945-7339964 | Msa0586230:CDS | 30.0% |
| GGAATTAATATCTTCTTGTC+TGG | - | chr4_2:7340017-7340036 | Msa0586230:intron | 30.0% | |
| TTGTTCCAACAGAAAATCTT+AGG | - | chr4_2:7340042-7340061 | Msa0586230:intron | 30.0% | |
| CAACAGAAAATCTTAGGTTT+CGG | - | chr4_2:7340048-7340067 | Msa0586230:intron | 30.0% | |
| AACAGAAAATCTTAGGTTTC+GGG | - | chr4_2:7340049-7340068 | Msa0586230:intron | 30.0% | |
| CTTTATATTCCATAAATGGG+AGG | + | chr4_2:7340116-7340135 | None:intergenic | 30.0% | |
| TCAATCAATCTCAGTATTGT+AGG | + | chr4_2:7340185-7340204 | None:intergenic | 30.0% | |
| ! | AAAGTAGTGCCGAAAATATT+TGG | - | chr4_2:7340243-7340262 | Msa0586230:intron | 30.0% |
| TATAAATGATGCATCGCAAA+AGG | + | chr4_2:7340313-7340332 | None:intergenic | 30.0% | |
| ACTAAAAGAATACCAGCATA+CGG | + | chr4_2:7340707-7340726 | None:intergenic | 30.0% | |
| AATGAACCAACCTGAATAAA+AGG | + | chr4_2:7340792-7340811 | None:intergenic | 30.0% | |
| TTGTGTGAAATATTGAACTC+AGG | + | chr4_2:7340852-7340871 | None:intergenic | 30.0% | |
| !! | CTAACAGTTGATTTGAACTT+TGG | + | chr4_2:7340891-7340910 | None:intergenic | 30.0% |
| GATGAATTCTTTCATGTAAC+AGG | + | chr4_2:7340917-7340936 | None:intergenic | 30.0% | |
| ATCACATCTGATATAAACTG+GGG | + | chr4_2:7340954-7340973 | None:intergenic | 30.0% | |
| CATCACATCTGATATAAACT+GGG | + | chr4_2:7340955-7340974 | None:intergenic | 30.0% | |
| TCATCACATCTGATATAAAC+TGG | + | chr4_2:7340956-7340975 | None:intergenic | 30.0% | |
| GTAAAAAGGAAAGAAAAAGC+AGG | + | chr4_2:7341139-7341158 | None:intergenic | 30.0% | |
| !! | CCGATATAGACAATTTTAAC+CGG | + | chr4_2:7341312-7341331 | None:intergenic | 30.0% |
| CCGGTTAAAATTGTCTATAT+CGG | - | chr4_2:7341309-7341328 | Msa0586230:intron | 30.0% | |
| !!! | CTTTTTTATATGGGCCAAAT+GGG | - | chr4_2:7341339-7341358 | Msa0586230:intron | 30.0% |
| ! | AAAAAAACCCGAGTGTATTT+TGG | - | chr4_2:7341371-7341390 | Msa0586230:intron | 30.0% |
| ! | AAAAAACCCGAGTGTATTTT+GGG | - | chr4_2:7341372-7341391 | Msa0586230:intron | 30.0% |
| !! | TGAAAATATTGATAATGGGC+CGG | - | chr4_2:7341687-7341706 | Msa0586230:intron | 30.0% |
| ! | CTACTTCCATGTCAATTTTT+CGG | - | chr4_2:7341817-7341836 | Msa0586230:intron | 30.0% |
| TGACAGAGTTATTGTTTATG+AGG | - | chr4_2:7342239-7342258 | Msa0586230:intron | 30.0% | |
| GACAGAGTTATTGTTTATGA+GGG | - | chr4_2:7342240-7342259 | Msa0586230:intron | 30.0% | |
| ! | AAAATTATGTTTTGCTCTCG+TGG | - | chr4_2:7342404-7342423 | Msa0586230:intron | 30.0% |
| !!! | GTTTATTTTTGCATTGCTCT+TGG | - | chr4_2:7342602-7342621 | Msa0586230:intron | 30.0% |
| ! | AAATTGTTGAGTTGTTGCAT+TGG | + | chr4_2:7342692-7342711 | None:intergenic | 30.0% |
| AATGCAACAACTCAACAATT+TGG | - | chr4_2:7342691-7342710 | Msa0586230:intron | 30.0% | |
| ATGCAACAACTCAACAATTT+GGG | - | chr4_2:7342692-7342711 | Msa0586230:intron | 30.0% | |
| TTTGCATTTACTATTGCTCT+TGG | - | chr4_2:7342768-7342787 | Msa0586230:CDS | 30.0% | |
| AAATTGTTGAGATGTTGCAT+TGG | + | chr4_2:7342859-7342878 | None:intergenic | 30.0% | |
| TCTATATCCATTGAGAAAGA+TGG | + | chr4_2:7342937-7342956 | None:intergenic | 30.0% | |
| GCTTATTACGCAGTTTATAT+CGG | - | chr4_2:7343070-7343089 | Msa0586230:intron | 30.0% | |
| ATGGCGATAAACTTAATATG+TGG | + | chr4_2:7343137-7343156 | None:intergenic | 30.0% | |
| ATAAATTATGAGAGCTGAGA+TGG | + | chr4_2:7343156-7343175 | None:intergenic | 30.0% | |
| AACACAATCAAAAAGCCGAT+CGG | + | chr4_2:7337452-7337471 | None:intergenic | 35.0% | |
| ! | TCAGTTGAATATTGGTGGTT+TGG | - | chr4_2:7337697-7337716 | Msa0586230:intron | 35.0% |
| ! | CAGTTGAATATTGGTGGTTT+GGG | - | chr4_2:7337698-7337717 | Msa0586230:intron | 35.0% |
| ! | AGTTGAATATTGGTGGTTTG+GGG | - | chr4_2:7337699-7337718 | Msa0586230:intron | 35.0% |
| AACAAAACACCGAATCATAC+CGG | + | chr4_2:7337817-7337836 | None:intergenic | 35.0% | |
| TGGATGTGGTATTTGTGTTA+AGG | - | chr4_2:7337983-7338002 | Msa0586230:CDS | 35.0% | |
| ! | ATGATTTTGCGACGATAATC+TGG | - | chr4_2:7338049-7338068 | Msa0586230:intron | 35.0% |
| ! | TGATTTTGCGACGATAATCT+GGG | - | chr4_2:7338050-7338069 | Msa0586230:intron | 35.0% |
| AAAGACACCACTCATAGATA+TGG | - | chr4_2:7338160-7338179 | Msa0586230:intron | 35.0% | |
| ATTAGGACCATATCTATGAG+TGG | + | chr4_2:7338170-7338189 | None:intergenic | 35.0% | |
| TTTAGGTAACCACAGCTAAA+AGG | + | chr4_2:7338215-7338234 | None:intergenic | 35.0% | |
| AGTTGTGTATTATAGGTTGC+CGG | - | chr4_2:7338296-7338315 | Msa0586230:CDS | 35.0% | |
| TTGGTTGGGAAAAATGGAAT+TGG | - | chr4_2:7338345-7338364 | Msa0586230:CDS | 35.0% | |
| TGGTTGGGAAAAATGGAATT+GGG | - | chr4_2:7338346-7338365 | Msa0586230:CDS | 35.0% | |
| CTTTCCAGCCAAAATTCTAA+GGG | + | chr4_2:7338382-7338401 | None:intergenic | 35.0% | |
| ACTTTCCAGCCAAAATTCTA+AGG | + | chr4_2:7338383-7338402 | None:intergenic | 35.0% | |
| !!! | TAGAATTTTGGCTGGAAAGT+TGG | - | chr4_2:7338383-7338402 | Msa0586230:CDS | 35.0% |
| CATGTTGACGTTTCATTAAC+TGG | - | chr4_2:7338869-7338888 | Msa0586230:intron | 35.0% | |
| ATGTTGACATTGACATTAGC+TGG | - | chr4_2:7338963-7338982 | Msa0586230:intron | 35.0% | |
| TGTTGACATTGACATTAGCT+GGG | - | chr4_2:7338964-7338983 | Msa0586230:intron | 35.0% | |
| ! | AGATAATCTTTGAAGAGGTG+GGG | - | chr4_2:7339066-7339085 | Msa0586230:intron | 35.0% |
| GATAGTGTGACACTTAAGAA+AGG | - | chr4_2:7339401-7339420 | Msa0586230:intron | 35.0% | |
| !! | GTAATGTTGGTGATCTTTCA+GGG | - | chr4_2:7339614-7339633 | Msa0586230:CDS | 35.0% |
| !! | TAATGTTGGTGATCTTTCAG+GGG | - | chr4_2:7339615-7339634 | Msa0586230:CDS | 35.0% |
| !! | GTATATCTCAGCTTTTAGGA+GGG | + | chr4_2:7339674-7339693 | None:intergenic | 35.0% |
| ! | TGTATATCTCAGCTTTTAGG+AGG | + | chr4_2:7339675-7339694 | None:intergenic | 35.0% |
| CTCACATCAAGATAACTAGA+AGG | + | chr4_2:7339709-7339728 | None:intergenic | 35.0% | |
| TATTATGCCTTAGCAATGAC+CGG | + | chr4_2:7339759-7339778 | None:intergenic | 35.0% | |
| ! | CGAAACCTAAGATTTTCTGT+TGG | + | chr4_2:7340050-7340069 | None:intergenic | 35.0% |
| ATATTCCATAAATGGGAGGT+AGG | + | chr4_2:7340112-7340131 | None:intergenic | 35.0% | |
| CAATACTGAGATTGATTGAG+TGG | - | chr4_2:7340186-7340205 | Msa0586230:intron | 35.0% | |
| CTAGACACAACATTAAAGCA+GGG | + | chr4_2:7340511-7340530 | None:intergenic | 35.0% | |
| TGTAGTTGGAGGAGAATTTA+CGG | - | chr4_2:7340626-7340645 | Msa0586230:intron | 35.0% | |
| ! | TCTCAGATTGTTGTTATGCT+TGG | - | chr4_2:7340651-7340670 | Msa0586230:intron | 35.0% |
| ! | TTGTTATGCTTGGTGAGAAT+GGG | - | chr4_2:7340661-7340680 | Msa0586230:intron | 35.0% |
| TCATTGAAACCTGACACTAT+AGG | - | chr4_2:7340807-7340826 | Msa0586230:CDS | 35.0% | |
| ! | AACTTTGGGTTAATTGTCTG+AGG | + | chr4_2:7340876-7340895 | None:intergenic | 35.0% |
| !!! | GAAGTTTTGAATCTTTCTGG+TGG | - | chr4_2:7341008-7341027 | Msa0586230:CDS | 35.0% |
| GTTTCCTTATGTCTTTGTCT+TGG | - | chr4_2:7341044-7341063 | Msa0586230:intron | 35.0% | |
| CTTTCCAAGACAAAGACATA+AGG | + | chr4_2:7341051-7341070 | None:intergenic | 35.0% | |
| CTTATGTCTTTGTCTTGGAA+AGG | - | chr4_2:7341049-7341068 | Msa0586230:intron | 35.0% | |
| ! | GCAATCTTATGCAGTTTTCA+AGG | + | chr4_2:7341090-7341109 | None:intergenic | 35.0% |
| TTCATAGTTTCCTTTATGCC+AGG | - | chr4_2:7341172-7341191 | Msa0586230:intron | 35.0% | |
| TTAGAGTGATGACAAGATCA+AGG | - | chr4_2:7341231-7341250 | Msa0586230:intron | 35.0% | |
| TAGAGTGATGACAAGATCAA+GGG | - | chr4_2:7341232-7341251 | Msa0586230:intron | 35.0% | |
| TAAAATTGTCTATATCGGCC+CGG | - | chr4_2:7341314-7341333 | Msa0586230:intron | 35.0% | |
| CCATTTGGCCCATATAAAAA+AGG | + | chr4_2:7341341-7341360 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTATATGGGCCAAA+TGG | - | chr4_2:7341338-7341357 | Msa0586230:intron | 35.0% |
| AAACTAGCCCAAAATACACT+CGG | + | chr4_2:7341382-7341401 | None:intergenic | 35.0% | |
| AAACTAGCCCAAAATACACT+CGG | + | chr4_2:7341382-7341401 | None:intergenic | 35.0% | |
| GAAGTAGAGCTGTCAAAAAT+GGG | + | chr4_2:7341804-7341823 | None:intergenic | 35.0% | |
| GTGTTTCCGAAAAATTGACA+TGG | + | chr4_2:7341826-7341845 | None:intergenic | 35.0% | |
| ! | ATCTATTTGTGTTGACGTCA+TGG | - | chr4_2:7341931-7341950 | Msa0586230:CDS | 35.0% |
| TCTATCAGATAAATGTCTGC+AGG | + | chr4_2:7342090-7342109 | None:intergenic | 35.0% | |
| TTGCTGCAAAAGTTATCAAG+AGG | - | chr4_2:7342148-7342167 | Msa0586230:CDS | 35.0% | |
| TTTGCAGTACAGTCAATTGA+AGG | + | chr4_2:7342270-7342289 | None:intergenic | 35.0% | |
| !! | AACCAAGTTTGTTGATCCTT+GGG | + | chr4_2:7342512-7342531 | None:intergenic | 35.0% |
| ! | TTACCTTGATGACTAAGTTC+AGG | - | chr4_2:7342572-7342591 | Msa0586230:CDS | 35.0% |
| AAACCTGAACTTAGTCATCA+AGG | + | chr4_2:7342578-7342597 | None:intergenic | 35.0% | |
| !! | CTTGGAATACTTTGCTTTTG+CGG | - | chr4_2:7342620-7342639 | Msa0586230:intron | 35.0% |
| TGCAACAATAGAAACAGAGT+CGG | + | chr4_2:7342656-7342675 | None:intergenic | 35.0% | |
| GCAACAATAGAAAACAGAGT+CGG | + | chr4_2:7342822-7342841 | None:intergenic | 35.0% | |
| AGCAACATCGCTAAGTATTA+CGG | + | chr4_2:7343013-7343032 | None:intergenic | 35.0% | |
| !! | GGTCAGTTTTGGTATGATTT+CGG | - | chr4_2:7343036-7343055 | Msa0586230:intron | 35.0% |
| ACACAATCAAAAAGCCGATC+GGG | + | chr4_2:7337451-7337470 | None:intergenic | 40.0% | |
| AGATGCAAGCCAAAAAAGTG+TGG | - | chr4_2:7337756-7337775 | Msa0586230:intron | 40.0% | |
| TCGTCATAACCGGTATGATT+CGG | - | chr4_2:7337805-7337824 | Msa0586230:CDS | 40.0% | |
| TATCAACTTGCCGGAGAATT+TGG | - | chr4_2:7338135-7338154 | Msa0586230:intron | 40.0% | |
| GTGTCTTTGTCCAAATTCTC+CGG | + | chr4_2:7338148-7338167 | None:intergenic | 40.0% | |
| !! | CTTGGTTTGGTTGGGAAAAA+TGG | - | chr4_2:7338339-7338358 | Msa0586230:CDS | 40.0% |
| TGGAAAGTTGGAGCCAAATT+TGG | - | chr4_2:7338395-7338414 | Msa0586230:CDS | 40.0% | |
| GGAAAGTTGGAGCCAAATTT+GGG | - | chr4_2:7338396-7338415 | Msa0586230:CDS | 40.0% | |
| ACAGTGAAACGACCCAAATT+TGG | + | chr4_2:7338411-7338430 | None:intergenic | 40.0% | |
| CTTTCGAGATGAGAGTTTGA+AGG | - | chr4_2:7338594-7338613 | Msa0586230:intron | 40.0% | |
| GTTGACATTGACATTAGCTG+GGG | - | chr4_2:7338965-7338984 | Msa0586230:intron | 40.0% | |
| GGTATGTTGTGGTTGTGATT+GGG | - | chr4_2:7338986-7339005 | Msa0586230:intron | 40.0% | |
| GATTGGGATTTGTGAGTGTT+TGG | - | chr4_2:7339002-7339021 | Msa0586230:intron | 40.0% | |
| ACATTCATAAAACGGGGCAA+GGG | - | chr4_2:7339503-7339522 | Msa0586230:CDS | 40.0% | |
| !! | CGTAATGTTGGTGATCTTTC+AGG | - | chr4_2:7339613-7339632 | Msa0586230:CDS | 40.0% |
| !! | AATGTTGGTGATCTTTCAGG+GGG | - | chr4_2:7339616-7339635 | Msa0586230:CDS | 40.0% |
| GTTATCTTGATGTGAGACAG+AGG | - | chr4_2:7339713-7339732 | Msa0586230:intron | 40.0% | |
| GGTCATTGCTAAGGCATAAT+AGG | - | chr4_2:7339758-7339777 | Msa0586230:intron | 40.0% | |
| TGAACACGATCTTAGTGTCT+TGG | - | chr4_2:7339911-7339930 | Msa0586230:CDS | 40.0% | |
| ATTCCTTCTCTGACTGAGAA+AGG | + | chr4_2:7340002-7340021 | None:intergenic | 40.0% | |
| TATCTCCTACCTCCCATTTA+TGG | - | chr4_2:7340104-7340123 | Msa0586230:intron | 40.0% | |
| CCTAGACACAACATTAAAGC+AGG | + | chr4_2:7340512-7340531 | None:intergenic | 40.0% | |
| CCTGCTTTAATGTTGTGTCT+AGG | - | chr4_2:7340509-7340528 | Msa0586230:CDS | 40.0% | |
| !! | CTTGAGTTTTGGTCATGGTT+GGG | + | chr4_2:7340590-7340609 | None:intergenic | 40.0% |
| ! | GTTGTTATGCTTGGTGAGAA+TGG | - | chr4_2:7340660-7340679 | Msa0586230:intron | 40.0% |
| ! | TTCACCACCTCCTTTTATTC+AGG | - | chr4_2:7340779-7340798 | Msa0586230:CDS | 40.0% |
| GAACCAACCTGAATAAAAGG+AGG | + | chr4_2:7340789-7340808 | None:intergenic | 40.0% | |
| TTGAAACCTGACACTATAGG+TGG | - | chr4_2:7340810-7340829 | Msa0586230:CDS | 40.0% | |
| ATCAGCTGTTCGATAAGTAG+TGG | + | chr4_2:7340981-7341000 | None:intergenic | 40.0% | |
| ACTACTTATCGAACAGCTGA+TGG | - | chr4_2:7340980-7340999 | Msa0586230:CDS | 40.0% | |
| TAAAAGACCAAACTTCGACC+TGG | + | chr4_2:7341193-7341212 | None:intergenic | 40.0% | |
| TGTTATGGATGTGCATCAAC+CGG | - | chr4_2:7341290-7341309 | Msa0586230:intron | 40.0% | |
| TGGCCCATATAAAAAAGGAC+CGG | + | chr4_2:7341336-7341355 | None:intergenic | 40.0% | |
| !!! | TTTTTTTGCCCAAGCCCATT+TGG | + | chr4_2:7341356-7341375 | None:intergenic | 40.0% |
| AACTAGCCCAAAATACACTC+GGG | + | chr4_2:7341381-7341400 | None:intergenic | 40.0% | |
| !!! | ATAGGCCATATTTTTGGGCT+GGG | + | chr4_2:7341418-7341437 | None:intergenic | 40.0% |
| !!! | TTTTTTTGCCCAAGCCCATT+TGG | + | chr4_2:7341356-7341375 | None:intergenic | 40.0% |
| GGAAGTAGAGCTGTCAAAAA+TGG | + | chr4_2:7341805-7341824 | None:intergenic | 40.0% | |
| !! | TCGTAGAACCGTAATGGATA+AGG | + | chr4_2:7341896-7341915 | None:intergenic | 40.0% |
| CAACACAAATAGATGTCTGC+AGG | + | chr4_2:7341925-7341944 | None:intergenic | 40.0% | |
| TGCAGCAATAATACGCTGTT+CGG | + | chr4_2:7342136-7342155 | None:intergenic | 40.0% | |
| TGCAAAGAAAACAGCCTTTG+TGG | - | chr4_2:7342182-7342201 | Msa0586230:CDS | 40.0% | |
| GAAATCATGCTCAACCACAA+AGG | + | chr4_2:7342199-7342218 | None:intergenic | 40.0% | |
| GGTTGAGCATGATTTCATCA+TGG | - | chr4_2:7342203-7342222 | Msa0586230:intron | 40.0% | |
| !! | GAACCAAGTTTGTTGATCCT+TGG | + | chr4_2:7342513-7342532 | None:intergenic | 40.0% |
| CAACAAACTTGGTTCAACCA+AGG | - | chr4_2:7342518-7342537 | Msa0586230:CDS | 40.0% | |
| ! | AAGCTTTTGCTCTCTATCCT+TGG | + | chr4_2:7342538-7342557 | None:intergenic | 40.0% |
| ! | ATAGAGAGCAAAAGCTTGCT+GGG | - | chr4_2:7342541-7342560 | Msa0586230:CDS | 40.0% |
| ! | TTACCTTGATGACTGAGTTC+AGG | - | chr4_2:7342731-7342750 | Msa0586230:CDS | 40.0% |
| AAACCTGAACTCAGTCATCA+AGG | + | chr4_2:7342737-7342756 | None:intergenic | 40.0% | |
| CTCTTGGAACACTTTGCTTT+CGG | - | chr4_2:7342784-7342803 | Msa0586230:exon | 40.0% | |
| TCTTGGAACACTTTGCTTTC+GGG | - | chr4_2:7342785-7342804 | Msa0586230:exon | 40.0% | |
| ATGGCTTCAACAGGGAAAAA+AGG | + | chr4_2:7342918-7342937 | None:intergenic | 40.0% | |
| TGAGAAAGATGGCTTCAACA+GGG | + | chr4_2:7342926-7342945 | None:intergenic | 40.0% | |
| TTGAGAAAGATGGCTTCAAC+AGG | + | chr4_2:7342927-7342946 | None:intergenic | 40.0% | |
| GTTGAAGCCATCTTTCTCAA+TGG | - | chr4_2:7342927-7342946 | Msa0586230:intron | 40.0% | |
| ATACTTAGCGATGTTGCTCA+TGG | - | chr4_2:7343015-7343034 | Msa0586230:intron | 40.0% | |
| ! | ATGTTGCTCATGGTCAGTTT+TGG | - | chr4_2:7343025-7343044 | Msa0586230:intron | 40.0% |
| TGCGTAATAAGCAGATTCAC+TGG | + | chr4_2:7343062-7343081 | None:intergenic | 40.0% | |
| TACGCAGTTTATATCGGTCA+TGG | - | chr4_2:7343076-7343095 | Msa0586230:intron | 40.0% | |
| GTGGCATCATTATTCAGTCA+AGG | + | chr4_2:7343118-7343137 | None:intergenic | 40.0% | |
| AGAGGACGGTGAAACTAGAA+AGG | + | chr4_2:7337403-7337422 | None:intergenic | 45.0% | |
| CACAATCAAAAAGCCGATCG+GGG | + | chr4_2:7337450-7337469 | None:intergenic | 45.0% | |
| ACGCGTATTGCCATTGTCAA+TGG | - | chr4_2:7337729-7337748 | Msa0586230:intron | 45.0% | |
| GCATCTGTCTCCATTGACAA+TGG | + | chr4_2:7337742-7337761 | None:intergenic | 45.0% | |
| ! | CAAGCCAAAAAAGTGTGGAC+AGG | - | chr4_2:7337761-7337780 | Msa0586230:intron | 45.0% |
| !!! | CACTCCTGTCCACACTTTTT+TGG | + | chr4_2:7337768-7337787 | None:intergenic | 45.0% |
| ! | TCATACCGGTTATGACGACA+GGG | + | chr4_2:7337803-7337822 | None:intergenic | 45.0% |
| ! | ATCATACCGGTTATGACGAC+AGG | + | chr4_2:7337804-7337823 | None:intergenic | 45.0% |
| GAAGATTGCTTACCTATCCG+AGG | - | chr4_2:7337950-7337969 | Msa0586230:CDS | 45.0% | |
| ACATCCAGTGCACAATTCCT+CGG | + | chr4_2:7337970-7337989 | None:intergenic | 45.0% | |
| !! | GGAAAGTGCTTGGTTTGGTT+GGG | - | chr4_2:7338331-7338350 | Msa0586230:CDS | 45.0% |
| ! | GTCCACTGCCCTTAGAATTT+TGG | - | chr4_2:7338371-7338390 | Msa0586230:CDS | 45.0% |
| ! | AGCCAAAATTCTAAGGGCAG+TGG | + | chr4_2:7338376-7338395 | None:intergenic | 45.0% |
| !! | ACTGCCCTTAGAATTTTGGC+TGG | - | chr4_2:7338375-7338394 | Msa0586230:CDS | 45.0% |
| AAACATGTCTGTCCACTCCA+CGG | + | chr4_2:7338468-7338487 | None:intergenic | 45.0% | |
| ! | ACTGCATTCACCTCTGCTTT+TGG | - | chr4_2:7338496-7338515 | Msa0586230:intron | 45.0% |
| GTTCTGCAAACCAAAAGCAG+AGG | + | chr4_2:7338509-7338528 | None:intergenic | 45.0% | |
| AAATTTCCTGCCAGTCAGGA+GGG | + | chr4_2:7338531-7338550 | None:intergenic | 45.0% | |
| AAAATTTCCTGCCAGTCAGG+AGG | + | chr4_2:7338532-7338551 | None:intergenic | 45.0% | |
| GTCAAAATTTCCTGCCAGTC+AGG | + | chr4_2:7338535-7338554 | None:intergenic | 45.0% | |
| ACATTAGCTGGGGTATGTTG+TGG | - | chr4_2:7338975-7338994 | Msa0586230:intron | 45.0% | |
| GGGTATGTTGTGGTTGTGAT+TGG | - | chr4_2:7338985-7339004 | Msa0586230:intron | 45.0% | |
| CACATTCATAAAACGGGGCA+AGG | - | chr4_2:7339502-7339521 | Msa0586230:CDS | 45.0% | |
| CAACAGCAATGGCAAACCTT+TGG | + | chr4_2:7339648-7339667 | None:intergenic | 45.0% | |
| TAGCAATGACCGGACAACTT+GGG | + | chr4_2:7339749-7339768 | None:intergenic | 45.0% | |
| TTAGCAATGACCGGACAACT+TGG | + | chr4_2:7339750-7339769 | None:intergenic | 45.0% | |
| AAGTTGTCCGGTCATTGCTA+AGG | - | chr4_2:7339749-7339768 | Msa0586230:intron | 45.0% | |
| ! | TGCTGTTTGTATGGAACACC+TGG | - | chr4_2:7339954-7339973 | Msa0586230:CDS | 45.0% |
| TATGGAACACCTGGTGCATA+TGG | - | chr4_2:7339963-7339982 | Msa0586230:CDS | 45.0% | |
| CTTCCTTTCTCAGTCAGAGA+AGG | - | chr4_2:7339996-7340015 | Msa0586230:intron | 45.0% | |
| GGATGACTCTCTTACCTTCA+AGG | - | chr4_2:7340070-7340089 | Msa0586230:intron | 45.0% | |
| ATCAATCTCAGCGCCCAAAT+TGG | + | chr4_2:7340139-7340158 | None:intergenic | 45.0% | |
| TGAGCTTCAGCAGTTTCATG+TGG | + | chr4_2:7340546-7340565 | None:intergenic | 45.0% | |
| !! | CCTTGAGTTTTGGTCATGGT+TGG | + | chr4_2:7340591-7340610 | None:intergenic | 45.0% |
| CCAACCATGACCAAAACTCA+AGG | - | chr4_2:7340588-7340607 | Msa0586230:CDS | 45.0% | |
| !! | CTTGCCTTGAGTTTTGGTCA+TGG | + | chr4_2:7340595-7340614 | None:intergenic | 45.0% |
| ! | CCTGAACTTGCCTTGAGTTT+TGG | + | chr4_2:7340601-7340620 | None:intergenic | 45.0% |
| CCAAAACTCAAGGCAAGTTC+AGG | - | chr4_2:7340598-7340617 | Msa0586230:CDS | 45.0% | |
| AAGTTCAGGCTTCGTGTAGT+TGG | - | chr4_2:7340612-7340631 | Msa0586230:intron | 45.0% | |
| ! | TATGCTTGGTGAGAATGGGA+CGG | - | chr4_2:7340665-7340684 | Msa0586230:intron | 45.0% |
| GACAACATTCATCCGTATGC+TGG | - | chr4_2:7340692-7340711 | Msa0586230:intron | 45.0% | |
| CCAACCTGAATAAAAGGAGG+TGG | + | chr4_2:7340786-7340805 | None:intergenic | 45.0% | |
| ! | CCACCTCCTTTTATTCAGGT+TGG | - | chr4_2:7340783-7340802 | Msa0586230:CDS | 45.0% |
| TCAGATCCACCTATAGTGTC+AGG | + | chr4_2:7340819-7340838 | None:intergenic | 45.0% | |
| CACTATAGGTGGATCTGATG+TGG | - | chr4_2:7340821-7340840 | Msa0586230:CDS | 45.0% | |
| CAGGGCAGACACTAGAATTA+AGG | + | chr4_2:7341120-7341139 | None:intergenic | 45.0% | |
| CAAACTTCGACCTGGCATAA+AGG | + | chr4_2:7341185-7341204 | None:intergenic | 45.0% | |
| CTTTATGCCAGGTCGAAGTT+TGG | - | chr4_2:7341183-7341202 | Msa0586230:intron | 45.0% | |
| !!! | GGCCCGGTCCTTTTTTATAT+GGG | - | chr4_2:7341330-7341349 | Msa0586230:intron | 45.0% |
| GGCCCATATAAAAAAGGACC+GGG | + | chr4_2:7341335-7341354 | None:intergenic | 45.0% | |
| ! | TTATATGGGCCAAATGGGCT+TGG | - | chr4_2:7341344-7341363 | Msa0586230:intron | 45.0% |
| ! | TATATGGGCCAAATGGGCTT+GGG | - | chr4_2:7341345-7341364 | Msa0586230:intron | 45.0% |
| !!! | GGGCTAGTTTTTTTAGGTCC+CGG | - | chr4_2:7341392-7341411 | Msa0586230:intron | 45.0% |
| !!! | GATAGGCCATATTTTTGGGC+TGG | + | chr4_2:7341419-7341438 | None:intergenic | 45.0% |
| !!! | GGGCTAGTTTTTTTAGGTCC+CGG | - | chr4_2:7341392-7341411 | Msa0586230:intron | 45.0% |
| CTACTGTCGTAGAACCGTAA+TGG | + | chr4_2:7341902-7341921 | None:intergenic | 45.0% | |
| AAAGACACAACGAAGCCAAG+AGG | + | chr4_2:7341976-7341995 | None:intergenic | 45.0% | |
| TAAATGTCTGCAGGCTGTTG+TGG | + | chr4_2:7342081-7342100 | None:intergenic | 45.0% | |
| TCGGAATCAAGATGTGCACT+TGG | + | chr4_2:7342117-7342136 | None:intergenic | 45.0% | |
| ATCCAACTAATTTCCGCCCA+AGG | - | chr4_2:7342493-7342512 | Msa0586230:intron | 45.0% | |
| ATCCTTGGGCGGAAATTAGT+TGG | + | chr4_2:7342498-7342517 | None:intergenic | 45.0% | |
| !! | CAAGTTTGTTGATCCTTGGG+CGG | + | chr4_2:7342509-7342528 | None:intergenic | 45.0% |
| GATAGAGAGCAAAAGCTTGC+TGG | - | chr4_2:7342540-7342559 | Msa0586230:CDS | 45.0% | |
| ! | TGTTGCATTGGCAAAAGAGC+AGG | + | chr4_2:7342680-7342699 | None:intergenic | 45.0% |
| CTTGGAACACTTTGCTTTCG+GGG | - | chr4_2:7342786-7342805 | Msa0586230:exon | 45.0% | |
| ! | TGTTGCATTGGCAAAAGAGC+AGG | + | chr4_2:7342680-7342699 | None:intergenic | 45.0% |
| CATGCAGAGCATATGTTGGT+TGG | - | chr4_2:7342970-7342989 | Msa0586230:intron | 45.0% | |
| !!! | TAATTTTTTTTTTTACAAAT+TGG | - | chr4_2:7338727-7338746 | Msa0586230:intron | 5.0% |
| !!! | TTCAATTATTTTAAAAATAA+TGG | + | chr4_2:7342362-7342381 | None:intergenic | 5.0% |
| ! | ACTAGAAAGGTGTGCCTTGC+CGG | + | chr4_2:7337390-7337409 | None:intergenic | 50.0% |
| CGGTGAATAGAGAGAGAGGA+CGG | + | chr4_2:7337417-7337436 | None:intergenic | 50.0% | |
| CTGTCGGTGAATAGAGAGAG+AGG | + | chr4_2:7337421-7337440 | None:intergenic | 50.0% | |
| CTCTCTCTCTATTCACCGAC+AGG | - | chr4_2:7337419-7337438 | Msa0586230:three_prime_UTR | 50.0% | |
| CAGTGCACAATTCCTCGGAT+AGG | + | chr4_2:7337965-7337984 | None:intergenic | 50.0% | |
| CTATCCGAGGAATTGTGCAC+TGG | - | chr4_2:7337963-7337982 | Msa0586230:CDS | 50.0% | |
| GAGGAATTGTGCACTGGATG+TGG | - | chr4_2:7337969-7337988 | Msa0586230:CDS | 50.0% | |
| !! | ATTATAGGTTGCCGGTTCCG+AGG | - | chr4_2:7338304-7338323 | Msa0586230:CDS | 50.0% |
| ACCAAACCAAGCACTTTCCC+CGG | + | chr4_2:7338330-7338349 | None:intergenic | 50.0% | |
| !! | GGGAAAGTGCTTGGTTTGGT+TGG | - | chr4_2:7338330-7338349 | Msa0586230:CDS | 50.0% |
| GGAGTGGACAGACATGTTTG+AGG | - | chr4_2:7338469-7338488 | Msa0586230:intron | 50.0% | |
| TGAAAGCTGCCCAAGTTGTC+CGG | - | chr4_2:7339737-7339756 | Msa0586230:intron | 50.0% | |
| GTTACGACTCCATATGCACC+AGG | + | chr4_2:7339975-7339994 | None:intergenic | 50.0% | |
| TTCAGGCTTCGTGTAGTTGG+AGG | - | chr4_2:7340615-7340634 | Msa0586230:intron | 50.0% | |
| ! | ATGCTTGGTGAGAATGGGAC+GGG | - | chr4_2:7340666-7340685 | Msa0586230:intron | 50.0% |
| !!! | CGGCCCGGTCCTTTTTTATA+TGG | - | chr4_2:7341329-7341348 | Msa0586230:intron | 50.0% |
| CTGTCAAAAATGGGCCAGCT+GGG | + | chr4_2:7341795-7341814 | None:intergenic | 50.0% | |
| TCTCCACAATCACTGCTGAC+TGG | - | chr4_2:7342291-7342310 | Msa0586230:intron | 50.0% | |
| ! | CTCCACAATCACTGCTGACT+GGG | - | chr4_2:7342292-7342311 | Msa0586230:intron | 50.0% |
| ATCCCAGTCAGCAGTGATTG+TGG | + | chr4_2:7342297-7342316 | None:intergenic | 50.0% | |
| CGCCCAAGGATCAACAAACT+TGG | - | chr4_2:7342507-7342526 | Msa0586230:intron | 50.0% | |
| GCTGCATGCAGAGCATATGT+TGG | - | chr4_2:7342966-7342985 | Msa0586230:intron | 50.0% | |
| GCAATCGCAAGGAGAGTGGA+GGG | + | chr4_2:7337348-7337367 | None:intergenic | 55.0% | |
| CGTTGCCCTGTCGTCATAAC+CGG | - | chr4_2:7337795-7337814 | Msa0586230:intron | 55.0% | |
| !! | ACAGGTGCGCCTTTTAGCTG+TGG | - | chr4_2:7338203-7338222 | Msa0586230:CDS | 55.0% |
| GTTTGCAGAACCCTCCTGAC+TGG | - | chr4_2:7338518-7338537 | Msa0586230:intron | 55.0% | |
| TAAAACGGGGCAAGGGAACG+TGG | - | chr4_2:7339510-7339529 | Msa0586230:CDS | 55.0% | |
| AAAACGGGGCAAGGGAACGT+GGG | - | chr4_2:7339511-7339530 | Msa0586230:CDS | 55.0% | |
| TTTCAGGGGGTGAGCTCCAA+AGG | - | chr4_2:7339629-7339648 | Msa0586230:CDS | 55.0% | |
| TAGGAGGGCAGCAACAGCAA+TGG | + | chr4_2:7339659-7339678 | None:intergenic | 55.0% | |
| !! | GGGCGCTGAGATTGATTGAG+TGG | - | chr4_2:7340143-7340162 | Msa0586230:intron | 55.0% |
| !!! | CCATATTTTTGGGCTGGGCC+GGG | + | chr4_2:7341413-7341432 | None:intergenic | 55.0% |
| !!! | GCCATATTTTTGGGCTGGGC+CGG | + | chr4_2:7341414-7341433 | None:intergenic | 55.0% |
| GCTGTCAAAAATGGGCCAGC+TGG | + | chr4_2:7341796-7341815 | None:intergenic | 55.0% | |
| CGCAATCGCAAGGAGAGTGG+AGG | + | chr4_2:7337349-7337368 | None:intergenic | 60.0% | |
| ! | AAAGGTGTGCCTTGCCGGAC+GGG | + | chr4_2:7337385-7337404 | None:intergenic | 60.0% |
| ! | GAAAGGTGTGCCTTGCCGGA+CGG | + | chr4_2:7337386-7337405 | None:intergenic | 60.0% |
| !! | GCCGGGGAAAGTGCTTGGTT+TGG | - | chr4_2:7338326-7338345 | Msa0586230:CDS | 60.0% |
| AAACGGGGCAAGGGAACGTG+GGG | - | chr4_2:7339512-7339531 | Msa0586230:CDS | 60.0% | |
| CCCGGCCCAGCCCAAAAATA+TGG | - | chr4_2:7341410-7341429 | Msa0586230:intron | 60.0% | |
| CCCATTTGGCCTGGCTCATC+GGG | + | chr4_2:7341720-7341739 | None:intergenic | 60.0% | |
| CCCGATGAGCCAGGCCAAAT+GGG | - | chr4_2:7341717-7341736 | Msa0586230:intron | 60.0% | |
| GCCCATTTGGCCTGGCTCAT+CGG | + | chr4_2:7341721-7341740 | None:intergenic | 60.0% | |
| ! | TGAGCCAGGCCAAATGGGCT+TGG | - | chr4_2:7341722-7341741 | Msa0586230:intron | 60.0% |
| ! | GAGCCAGGCCAAATGGGCTT+GGG | - | chr4_2:7341723-7341742 | Msa0586230:intron | 60.0% |
| TTGCCCAAGCCCATTTGGCC+TGG | + | chr4_2:7341351-7341370 | None:intergenic | 60.0% | |
| !!! | TTTTTAGGTCCCGGCCCAGC+TGG | - | chr4_2:7341401-7341420 | Msa0586230:intron | 60.0% |
| AAAAATGGGCCAGCTGGGCC+GGG | + | chr4_2:7341790-7341809 | None:intergenic | 60.0% | |
| CAAAAATGGGCCAGCTGGGC+CGG | + | chr4_2:7341791-7341810 | None:intergenic | 60.0% | |
| CGGCGCAATCGCAAGGAGAG+TGG | + | chr4_2:7337352-7337371 | None:intergenic | 65.0% | |
| TGTGCCTTGCCGGACGGGAA+AGG | + | chr4_2:7337380-7337399 | None:intergenic | 65.0% | |
| CCGATCGGGGAGAGACCTGT+CGG | + | chr4_2:7337437-7337456 | None:intergenic | 65.0% | |
| CCGACAGGTCTCTCCCCGAT+CGG | - | chr4_2:7337434-7337453 | Msa0586230:three_prime_UTR | 65.0% | |
| !! | TAGGTTGCCGGTTCCGAGGC+CGG | - | chr4_2:7338308-7338327 | Msa0586230:CDS | 65.0% |
| ACTTTCCCCGGCCTCGGAAC+CGG | + | chr4_2:7338318-7338337 | None:intergenic | 65.0% | |
| CCAAGCACTTTCCCCGGCCT+CGG | + | chr4_2:7338324-7338343 | None:intergenic | 65.0% | |
| GCAGAACCCTCCTGACTGGC+AGG | - | chr4_2:7338522-7338541 | Msa0586230:intron | 65.0% | |
| TGGCCTGGCTCATCGGGCTT+CGG | + | chr4_2:7341714-7341733 | None:intergenic | 65.0% | |
| GCCCGATGAGCCAGGCCAAA+TGG | - | chr4_2:7341716-7341735 | Msa0586230:intron | 65.0% | |
| GGTGCGACGGCGCAATCGCA+AGG | + | chr4_2:7337359-7337378 | None:intergenic | 70.0% | |
| GCCGTCGCACCTTTCCCGTC+CGG | - | chr4_2:7337368-7337387 | Msa0586230:three_prime_UTR | 70.0% | |
| ! | GCCGGACGGGAAAGGTGCGA+CGG | + | chr4_2:7337372-7337391 | None:intergenic | 70.0% |
| CGCACCTTTCCCGTCCGGCA+AGG | - | chr4_2:7337373-7337392 | Msa0586230:three_prime_UTR | 70.0% | |
| !! | AGGTTGCCGGTTCCGAGGCC+GGG | - | chr4_2:7338309-7338328 | Msa0586230:CDS | 70.0% |
| !! | CCGAGGCCGGGGAAAGTGCT+TGG | - | chr4_2:7338321-7338340 | Msa0586230:CDS | 70.0% |
| TGGCTCATCGGGCTTCGGGC+CGG | + | chr4_2:7341709-7341728 | None:intergenic | 70.0% | |
| GGCCTGGCTCATCGGGCTTC+GGG | + | chr4_2:7341713-7341732 | None:intergenic | 70.0% | |
| !! | GGTTGCCGGTTCCGAGGCCG+GGG | - | chr4_2:7338310-7338329 | Msa0586230:CDS | 75.0% |
| GGCCCGAAGCCCGATGAGCC+AGG | - | chr4_2:7341708-7341727 | Msa0586230:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 7337322 | 7343200 | 7337322 | ID=Msa0586230;Name=Msa0586230 |
| chr4_2 | mRNA | 7337322 | 7343200 | 7337322 | ID=Msa0586230-mRNA-1;Parent=Msa0586230;Name=Msa0586230-mRNA-1;_AED=0.11;_eAED=0.11;_QI=144|0.84|0.85|1|0.76|0.71|14|135|700 |
| chr4_2 | exon | 7337322 | 7337678 | 7337322 | ID=Msa0586230-mRNA-1:exon:1882;Parent=Msa0586230-mRNA-1 |
| chr4_2 | exon | 7337797 | 7337845 | 7337797 | ID=Msa0586230-mRNA-1:exon:1881;Parent=Msa0586230-mRNA-1 |
| chr4_2 | exon | 7337929 | 7338054 | 7337929 | ID=Msa0586230-mRNA-1:exon:1880;Parent=Msa0586230-mRNA-1 |
| chr4_2 | exon | 7338167 | 7338435 | 7338167 | ID=Msa0586230-mRNA-1:exon:1879;Parent=Msa0586230-mRNA-1 |
| chr4_2 | exon | 7339452 | 7339721 | 7339452 | ID=Msa0586230-mRNA-1:exon:1878;Parent=Msa0586230-mRNA-1 |
| chr4_2 | exon | 7339809 | 7339991 | 7339809 | ID=Msa0586230-mRNA-1:exon:1877;Parent=Msa0586230-mRNA-1 |
| chr4_2 | exon | 7340431 | 7340626 | 7340431 | ID=Msa0586230-mRNA-1:exon:1876;Parent=Msa0586230-mRNA-1 |
| chr4_2 | exon | 7340743 | 7341047 | 7340743 | ID=Msa0586230-mRNA-1:exon:1875;Parent=Msa0586230-mRNA-1 |
| chr4_2 | exon | 7341907 | 7341996 | 7341907 | ID=Msa0586230-mRNA-1:exon:1874;Parent=Msa0586230-mRNA-1 |
| chr4_2 | exon | 7342094 | 7342211 | 7342094 | ID=Msa0586230-mRNA-1:exon:1873;Parent=Msa0586230-mRNA-1 |
| chr4_2 | exon | 7342316 | 7342413 | 7342316 | ID=Msa0586230-mRNA-1:exon:1872;Parent=Msa0586230-mRNA-1 |
| chr4_2 | exon | 7342518 | 7342603 | 7342518 | ID=Msa0586230-mRNA-1:exon:1871;Parent=Msa0586230-mRNA-1 |
| chr4_2 | exon | 7342706 | 7342821 | 7342706 | ID=Msa0586230-mRNA-1:exon:1870;Parent=Msa0586230-mRNA-1 |
| chr4_2 | exon | 7343082 | 7343200 | 7343082 | ID=Msa0586230-mRNA-1:exon:1869;Parent=Msa0586230-mRNA-1 |
| chr4_2 | five_prime_UTR | 7343082 | 7343200 | 7343082 | ID=Msa0586230-mRNA-1:five_prime_utr;Parent=Msa0586230-mRNA-1 |
| chr4_2 | five_prime_UTR | 7342797 | 7342821 | 7342797 | ID=Msa0586230-mRNA-1:five_prime_utr;Parent=Msa0586230-mRNA-1 |
| chr4_2 | CDS | 7342706 | 7342796 | 7342706 | ID=Msa0586230-mRNA-1:cds;Parent=Msa0586230-mRNA-1 |
| chr4_2 | CDS | 7342518 | 7342603 | 7342518 | ID=Msa0586230-mRNA-1:cds;Parent=Msa0586230-mRNA-1 |
| chr4_2 | CDS | 7342316 | 7342413 | 7342316 | ID=Msa0586230-mRNA-1:cds;Parent=Msa0586230-mRNA-1 |
| chr4_2 | CDS | 7342094 | 7342211 | 7342094 | ID=Msa0586230-mRNA-1:cds;Parent=Msa0586230-mRNA-1 |
| chr4_2 | CDS | 7341907 | 7341996 | 7341907 | ID=Msa0586230-mRNA-1:cds;Parent=Msa0586230-mRNA-1 |
| chr4_2 | CDS | 7340743 | 7341047 | 7340743 | ID=Msa0586230-mRNA-1:cds;Parent=Msa0586230-mRNA-1 |
| chr4_2 | CDS | 7340431 | 7340626 | 7340431 | ID=Msa0586230-mRNA-1:cds;Parent=Msa0586230-mRNA-1 |
| chr4_2 | CDS | 7339809 | 7339991 | 7339809 | ID=Msa0586230-mRNA-1:cds;Parent=Msa0586230-mRNA-1 |
| chr4_2 | CDS | 7339452 | 7339721 | 7339452 | ID=Msa0586230-mRNA-1:cds;Parent=Msa0586230-mRNA-1 |
| chr4_2 | CDS | 7338167 | 7338435 | 7338167 | ID=Msa0586230-mRNA-1:cds;Parent=Msa0586230-mRNA-1 |
| chr4_2 | CDS | 7337929 | 7338054 | 7337929 | ID=Msa0586230-mRNA-1:cds;Parent=Msa0586230-mRNA-1 |
| chr4_2 | CDS | 7337797 | 7337845 | 7337797 | ID=Msa0586230-mRNA-1:cds;Parent=Msa0586230-mRNA-1 |
| chr4_2 | CDS | 7337457 | 7337678 | 7337457 | ID=Msa0586230-mRNA-1:cds;Parent=Msa0586230-mRNA-1 |
| chr4_2 | three_prime_UTR | 7337322 | 7337456 | 7337322 | ID=Msa0586230-mRNA-1:three_prime_utr;Parent=Msa0586230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
