Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0292330 | XP_013464372.1 | 99.664 | 298 | 1 | 0 | 1 | 298 | 1 | 298 | 0.0 | 615 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0292330 | sp|Q9LRR6|CID9_ARATH | 71.080 | 287 | 77 | 1 | 17 | 297 | 39 | 325 | 7.05e-151 | 428 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0292330 | A0A072V9E0 | 99.664 | 298 | 1 | 0 | 1 | 298 | 1 | 298 | 0.0 | 615 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0292330 | 0.802314 | 5.950900e-49 | -8.615850e-47 |
| Msa0000560 | Msa0292330 | 0.832174 | 1.099064e-55 | -8.615850e-47 |
| Msa0008110 | Msa0292330 | 0.826124 | 3.221531e-54 | -8.615850e-47 |
| Msa0018160 | Msa0292330 | 0.835119 | 2.019651e-56 | -8.615850e-47 |
| Msa0028420 | Msa0292330 | 0.847321 | 1.245146e-59 | -8.615850e-47 |
| Msa0036870 | Msa0292330 | 0.831022 | 2.111890e-55 | -8.615850e-47 |
| Msa0042610 | Msa0292330 | 0.809335 | 1.990879e-50 | -8.615850e-47 |
| Msa0043230 | Msa0292330 | 0.815447 | 9.203268e-52 | -8.615850e-47 |
| Msa0047030 | Msa0292330 | 0.827453 | 1.551420e-54 | -8.615850e-47 |
| Msa0052260 | Msa0292330 | 0.819492 | 1.128713e-52 | -8.615850e-47 |
| Msa0054690 | Msa0292330 | 0.810289 | 1.241230e-50 | -8.615850e-47 |
| Msa0057420 | Msa0292330 | 0.805157 | 1.528844e-49 | -8.615850e-47 |
| Msa0074350 | Msa0292330 | 0.808881 | 2.490396e-50 | -8.615850e-47 |
| Msa0088040 | Msa0292330 | 0.813344 | 2.684100e-51 | -8.615850e-47 |
| Msa0089630 | Msa0292330 | 0.808351 | 3.232952e-50 | -8.615850e-47 |
| Msa0090400 | Msa0292330 | 0.837636 | 4.624870e-57 | -8.615850e-47 |
| Msa0124060 | Msa0292330 | 0.817106 | 3.915779e-52 | -8.615850e-47 |
| Msa0134500 | Msa0292330 | 0.815460 | 9.139961e-52 | -8.615850e-47 |
| Msa0136650 | Msa0292330 | 0.821993 | 3.003819e-53 | -8.615850e-47 |
| Msa0137880 | Msa0292330 | 0.832938 | 7.103219e-56 | -8.615850e-47 |
| Msa0146040 | Msa0292330 | 0.829148 | 6.054629e-55 | -8.615850e-47 |
| Msa0149370 | Msa0292330 | 0.824573 | 7.501995e-54 | -8.615850e-47 |
| Msa0160830 | Msa0292330 | 0.800013 | 1.758905e-48 | -8.615850e-47 |
| Msa0168500 | Msa0292330 | 0.839434 | 1.588344e-57 | -8.615850e-47 |
| Msa0171290 | Msa0292330 | 0.806796 | 6.913653e-50 | -8.615850e-47 |
| Msa0178560 | Msa0292330 | 0.812605 | 3.898556e-51 | -8.615850e-47 |
| Msa0182320 | Msa0292330 | 0.832252 | 1.051246e-55 | -8.615850e-47 |
| Msa0189290 | Msa0292330 | 0.803230 | 3.849955e-49 | -8.615850e-47 |
| Msa0211150 | Msa0292330 | 0.803173 | 3.954847e-49 | -8.615850e-47 |
| Msa0229230 | Msa0292330 | 0.843898 | 1.055596e-58 | -8.615850e-47 |
| Msa0231200 | Msa0292330 | 0.805319 | 1.413479e-49 | -8.615850e-47 |
| Msa0255090 | Msa0292330 | 0.847760 | 9.431326e-60 | -8.615850e-47 |
| Msa0259380 | Msa0292330 | 0.850171 | 2.017566e-60 | -8.615850e-47 |
| Msa0267110 | Msa0292330 | 0.837607 | 4.704684e-57 | -8.615850e-47 |
| Msa0287740 | Msa0292330 | 0.803632 | 3.177555e-49 | -8.615850e-47 |
| Msa0292330 | Msa0292400 | 0.845788 | 3.264817e-59 | -8.615850e-47 |
| Msa0292330 | Msa0294160 | 0.813261 | 2.798982e-51 | -8.615850e-47 |
| Msa0292330 | Msa0297740 | 0.814526 | 1.473038e-51 | -8.615850e-47 |
| Msa0292330 | Msa0312700 | 0.802294 | 6.005913e-49 | -8.615850e-47 |
| Msa0292330 | Msa0323270 | 0.807678 | 4.494260e-50 | -8.615850e-47 |
| Msa0292330 | Msa0339500 | 0.804444 | 2.153798e-49 | -8.615850e-47 |
| Msa0292330 | Msa0349710 | 0.850343 | 1.806134e-60 | -8.615850e-47 |
| Msa0292330 | Msa0369810 | 0.844931 | 5.569477e-59 | -8.615850e-47 |
| Msa0292330 | Msa0371480 | 0.805563 | 1.256977e-49 | -8.615850e-47 |
| Msa0292330 | Msa0379770 | 0.805988 | 1.023068e-49 | -8.615850e-47 |
| Msa0292330 | Msa0380620 | 0.821148 | 4.709110e-53 | -8.615850e-47 |
| Msa0292330 | Msa0386850 | 0.807764 | 4.310617e-50 | -8.615850e-47 |
| Msa0292330 | Msa0415600 | 0.801429 | 9.041310e-49 | -8.615850e-47 |
| Msa0292330 | Msa0419700 | 0.838834 | 2.272790e-57 | -8.615850e-47 |
| Msa0292330 | Msa0428150 | 0.847342 | 1.228408e-59 | -8.615850e-47 |
| Msa0292330 | Msa0430260 | 0.817888 | 2.611002e-52 | -8.615850e-47 |
| Msa0292330 | Msa0435210 | 0.806453 | 8.166318e-50 | -8.615850e-47 |
| Msa0292330 | Msa0442830 | 0.855919 | 4.564840e-62 | -8.615850e-47 |
| Msa0292330 | Msa0444070 | 0.810995 | 8.736531e-51 | -8.615850e-47 |
| Msa0292330 | Msa0462500 | 0.852890 | 3.429153e-61 | -8.615850e-47 |
| Msa0292330 | Msa0467490 | 0.808462 | 3.060180e-50 | -8.615850e-47 |
| Msa0292330 | Msa0474520 | 0.818556 | 1.842729e-52 | -8.615850e-47 |
| Msa0292330 | Msa0483910 | 0.829783 | 4.242863e-55 | -8.615850e-47 |
| Msa0292330 | Msa0487420 | 0.802831 | 4.653917e-49 | -8.615850e-47 |
| Msa0292330 | Msa0509570 | 0.810554 | 1.087962e-50 | -8.615850e-47 |
| Msa0292330 | Msa0511750 | 0.826311 | 2.908763e-54 | -8.615850e-47 |
| Msa0292330 | Msa0520890 | 0.869576 | 2.793019e-66 | -8.615850e-47 |
| Msa0292330 | Msa0524190 | 0.808428 | 3.112615e-50 | -8.615850e-47 |
| Msa0292330 | Msa0526420 | 0.814541 | 1.461739e-51 | -8.615850e-47 |
| Msa0292330 | Msa0530780 | 0.835494 | 1.624026e-56 | -8.615850e-47 |
| Msa0292330 | Msa0532070 | 0.833210 | 6.078075e-56 | -8.615850e-47 |
| Msa0292330 | Msa0546500 | 0.820237 | 7.626652e-53 | -8.615850e-47 |
| Msa0292330 | Msa0563940 | 0.809916 | 1.493773e-50 | -8.615850e-47 |
| Msa0292330 | Msa0569200 | 0.801758 | 7.740059e-49 | -8.615850e-47 |
| Msa0292330 | Msa0587620 | 0.820697 | 5.980295e-53 | -8.615850e-47 |
| Msa0292330 | Msa0597790 | 0.805107 | 1.566118e-49 | -8.615850e-47 |
| Msa0292330 | Msa0604540 | 0.813847 | 2.080105e-51 | -8.615850e-47 |
| Msa0292330 | Msa0608320 | 0.805311 | 1.419503e-49 | -8.615850e-47 |
| Msa0292330 | Msa0615710 | 0.848579 | 5.601274e-60 | -8.615850e-47 |
| Msa0292330 | Msa0626450 | 0.830286 | 3.199609e-55 | -8.615850e-47 |
| Msa0292330 | Msa0626490 | 0.830885 | 2.282207e-55 | -8.615850e-47 |
| Msa0292330 | Msa0643300 | 0.817462 | 3.257625e-52 | -8.615850e-47 |
| Msa0292330 | Msa0650470 | 0.807229 | 5.596936e-50 | -8.615850e-47 |
| Msa0292330 | Msa0661150 | 0.807874 | 4.083937e-50 | -8.615850e-47 |
| Msa0292330 | Msa0661790 | 0.800122 | 1.671001e-48 | -8.615850e-47 |
| Msa0292330 | Msa0664600 | 0.825865 | 3.712874e-54 | -8.615850e-47 |
| Msa0292330 | Msa0665620 | 0.813504 | 2.475608e-51 | -8.615850e-47 |
| Msa0292330 | Msa0683570 | 0.839796 | 1.278476e-57 | -8.615850e-47 |
| Msa0292330 | Msa0689230 | 0.862327 | 5.483342e-64 | -8.615850e-47 |
| Msa0292330 | Msa0689520 | 0.847286 | 1.273207e-59 | -8.615850e-47 |
| Msa0292330 | Msa0700460 | 0.844339 | 8.035772e-59 | -8.615850e-47 |
| Msa0292330 | Msa0710800 | 0.826754 | 2.280854e-54 | -8.615850e-47 |
| Msa0292330 | Msa0716690 | 0.816749 | 4.710077e-52 | -8.615850e-47 |
| Msa0292330 | Msa0724910 | 0.803452 | 3.463101e-49 | -8.615850e-47 |
| Msa0292330 | Msa0730430 | 0.816894 | 4.369533e-52 | -8.615850e-47 |
| Msa0292330 | Msa0741240 | 0.802935 | 4.429654e-49 | -8.615850e-47 |
| Msa0292330 | Msa0745700 | -0.808022 | 3.797962e-50 | -8.615850e-47 |
| Msa0292330 | Msa0749740 | 0.812429 | 4.258586e-51 | -8.615850e-47 |
| Msa0292330 | Msa0753180 | 0.847180 | 1.361609e-59 | -8.615850e-47 |
| Msa0292330 | Msa0754520 | 0.817160 | 3.807536e-52 | -8.615850e-47 |
| Msa0292330 | Msa0756490 | 0.824030 | 1.006714e-53 | -8.615850e-47 |
| Msa0292330 | Msa0765840 | 0.849781 | 2.594060e-60 | -8.615850e-47 |
| Msa0292330 | Msa0765910 | 0.809265 | 2.061018e-50 | -8.615850e-47 |
| Msa0292330 | Msa0768990 | 0.806265 | 8.947196e-50 | -8.615850e-47 |
| Msa0292330 | Msa0770720 | 0.845132 | 4.915239e-59 | -8.615850e-47 |
| Msa0292330 | Msa0779870 | 0.801382 | 9.245786e-49 | -8.615850e-47 |
| Msa0292330 | Msa0806790 | 0.829763 | 4.291068e-55 | -8.615850e-47 |
| Msa0292330 | Msa0818310 | 0.809517 | 1.819509e-50 | -8.615850e-47 |
| Msa0292330 | Msa0823820 | 0.802476 | 5.510435e-49 | -8.615850e-47 |
| Msa0292330 | Msa0833220 | 0.813822 | 2.107355e-51 | -8.615850e-47 |
| Msa0292330 | Msa0845440 | 0.856695 | 2.703940e-62 | -8.615850e-47 |
| Msa0292330 | Msa0861870 | 0.815789 | 7.720890e-52 | -8.615850e-47 |
| Msa0292330 | Msa0863010 | 0.807957 | 3.922007e-50 | -8.615850e-47 |
| Msa0292330 | Msa0866270 | 0.801330 | 9.474273e-49 | -8.615850e-47 |
| Msa0292330 | Msa0869780 | 0.807419 | 5.101885e-50 | -8.615850e-47 |
| Msa0292330 | Msa0876190 | 0.800133 | 1.662661e-48 | -8.615850e-47 |
| Msa0292330 | Msa0880780 | 0.801737 | 7.819760e-49 | -8.615850e-47 |
| Msa0292330 | Msa0919770 | 0.815556 | 8.701744e-52 | -8.615850e-47 |
| Msa0292330 | Msa0945110 | 0.857792 | 1.281911e-62 | -8.615850e-47 |
| Msa0292330 | Msa0967870 | 0.804853 | 1.769860e-49 | -8.615850e-47 |
| Msa0292330 | Msa0979730 | 0.832067 | 1.168134e-55 | -8.615850e-47 |
| Msa0292330 | Msa1003800 | 0.828834 | 7.213985e-55 | -8.615850e-47 |
| Msa0292330 | Msa1018690 | 0.854711 | 1.026379e-61 | -8.615850e-47 |
| Msa0292330 | Msa1020670 | 0.862848 | 3.788514e-64 | -8.615850e-47 |
| Msa0292330 | Msa1037640 | 0.811639 | 6.330948e-51 | -8.615850e-47 |
| Msa0292330 | Msa1042160 | 0.810107 | 1.358908e-50 | -8.615850e-47 |
| Msa0292330 | Msa1042190 | 0.808830 | 2.553659e-50 | -8.615850e-47 |
| Msa0292330 | Msa1044680 | 0.813180 | 2.916236e-51 | -8.615850e-47 |
| Msa0292330 | Msa1045140 | 0.859823 | 3.167848e-63 | -8.615850e-47 |
| Msa0292330 | Msa1051830 | 0.818855 | 1.576117e-52 | -8.615850e-47 |
| Msa0292330 | Msa1065390 | 0.806387 | 8.430153e-50 | -8.615850e-47 |
| Msa0292330 | Msa1074370 | 0.827785 | 1.291065e-54 | -8.615850e-47 |
| Msa0292330 | Msa1077570 | 0.809348 | 1.977765e-50 | -8.615850e-47 |
| Msa0292330 | Msa1084960 | 0.836305 | 1.011808e-56 | -8.615850e-47 |
| Msa0292330 | Msa1096960 | 0.805962 | 1.036255e-49 | -8.615850e-47 |
| Msa0292330 | Msa1096970 | 0.842869 | 1.986525e-58 | -8.615850e-47 |
| Msa0292330 | Msa1103580 | 0.805657 | 1.200882e-49 | -8.615850e-47 |
| Msa0292330 | Msa1111090 | 0.828927 | 6.848800e-55 | -8.615850e-47 |
| Msa0292330 | Msa1113340 | 0.809726 | 1.640718e-50 | -8.615850e-47 |
| Msa0292330 | Msa1117920 | 0.802154 | 6.417317e-49 | -8.615850e-47 |
| Msa0292330 | Msa1130280 | 0.826429 | 2.725901e-54 | -8.615850e-47 |
| Msa0292330 | Msa1140210 | 0.855868 | 4.724330e-62 | -8.615850e-47 |
| Msa0292330 | Msa1144510 | 0.810545 | 1.092751e-50 | -8.615850e-47 |
| Msa0292330 | Msa1161680 | 0.806874 | 6.656020e-50 | -8.615850e-47 |
| Msa0292330 | Msa1162150 | 0.807981 | 3.876106e-50 | -8.615850e-47 |
| Msa0292330 | Msa1167470 | 0.808676 | 2.754476e-50 | -8.615850e-47 |
| Msa0292330 | Msa1183120 | 0.802689 | 4.980088e-49 | -8.615850e-47 |
| Msa0292330 | Msa1196440 | 0.811717 | 6.088383e-51 | -8.615850e-47 |
| Msa0292330 | Msa1200020 | 0.800463 | 1.424407e-48 | -8.615850e-47 |
| Msa0292330 | Msa1209460 | 0.829213 | 5.837277e-55 | -8.615850e-47 |
| Msa0292330 | Msa1216110 | 0.812519 | 4.069395e-51 | -8.615850e-47 |
| Msa0292330 | Msa1218550 | 0.807381 | 5.196231e-50 | -8.615850e-47 |
| Msa0292330 | Msa1223470 | 0.804821 | 1.797334e-49 | -8.615850e-47 |
| Msa0292330 | Msa1225700 | 0.831825 | 1.340336e-55 | -8.615850e-47 |
| Msa0292330 | Msa1229500 | 0.823836 | 1.117537e-53 | -8.615850e-47 |
| Msa0292330 | Msa1232710 | 0.802363 | 5.811900e-49 | -8.615850e-47 |
| Msa0292330 | Msa1240770 | 0.827463 | 1.542811e-54 | -8.615850e-47 |
| Msa0292330 | Msa1269480 | 0.814216 | 1.724649e-51 | -8.615850e-47 |
| Msa0292330 | Msa1271990 | 0.827185 | 1.799098e-54 | -8.615850e-47 |
| Msa0292330 | Msa1279380 | 0.825391 | 4.809602e-54 | -8.615850e-47 |
| Msa0292330 | Msa1282260 | 0.838764 | 2.368494e-57 | -8.615850e-47 |
| Msa0292330 | Msa1309790 | 0.807688 | 4.472657e-50 | -8.615850e-47 |
| Msa0292330 | Msa1321340 | 0.844546 | 7.068626e-59 | -8.615850e-47 |
| Msa0292330 | Msa1358220 | 0.867416 | 1.390434e-65 | -8.615850e-47 |
| Msa0292330 | Msa1363740 | 0.832667 | 8.296169e-56 | -8.615850e-47 |
| Msa0292330 | Msa1367370 | 0.801651 | 8.144037e-49 | -8.615850e-47 |
| Msa0292330 | Msa1369550 | 0.820525 | 6.551303e-53 | -8.615850e-47 |
| Msa0292330 | Msa1372230 | 0.831894 | 1.288254e-55 | -8.615850e-47 |
| Msa0292330 | Msa1374550 | 0.807945 | 3.943669e-50 | -8.615850e-47 |
| Msa0292330 | Msa1413690 | 0.990738 | 4.415971e-184 | -8.615850e-47 |
| Msa0292330 | Msa1417420 | 0.816059 | 6.722022e-52 | -8.615850e-47 |
| Msa0292330 | Msa1418090 | 0.801255 | 9.816128e-49 | -8.615850e-47 |
| Msa0292330 | Msa1429930 | 0.807570 | 4.738685e-50 | -8.615850e-47 |
| Msa0292330 | Msa1436570 | 0.810529 | 1.101455e-50 | -8.615850e-47 |
| Msa0292330 | Msa1440960 | 0.816985 | 4.170446e-52 | -8.615850e-47 |
| Msa0292330 | Msa1443110 | 0.809155 | 2.176459e-50 | -8.615850e-47 |
| Msa0292330 | Msa1454140 | 0.843997 | 9.927342e-59 | -8.615850e-47 |
| Msa0292330 | Msa1457910 | 0.801342 | 9.421742e-49 | -8.615850e-47 |
| Msa0292330 | Msa1464810 | 0.804022 | 2.636641e-49 | -8.615850e-47 |
| Msa0292330 | Msa1465440 | 0.804509 | 2.087617e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0292330 | MtrunA17_Chr2g0312971 | 99.664 | 298 | 1 | 0 | 1 | 298 | 1 | 298 | 0.0 | 615 |
| Msa0292330 | MtrunA17_Chr3g0127761 | 65.169 | 267 | 89 | 3 | 28 | 291 | 105 | 370 | 2.55e-124 | 360 |
| Msa0292330 | MtrunA17_Chr3g0127771 | 64.388 | 278 | 87 | 3 | 28 | 294 | 104 | 380 | 9.88e-122 | 353 |
| Msa0292330 | MtrunA17_Chr3g0134141 | 29.310 | 174 | 105 | 6 | 114 | 282 | 25 | 185 | 4.51e-13 | 69.3 |
| Msa0292330 | MtrunA17_Chr4g0044541 | 28.652 | 178 | 109 | 6 | 111 | 283 | 32 | 196 | 1.55e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0292330 | AT3G14450.1 | 71.080 | 287 | 77 | 1 | 17 | 297 | 39 | 325 | 7.16e-152 | 428 |
| Msa0292330 | AT1G53650.2 | 69.643 | 280 | 69 | 5 | 17 | 294 | 38 | 303 | 7.80e-142 | 402 |
| Msa0292330 | AT1G53650.1 | 68.440 | 282 | 75 | 4 | 17 | 294 | 38 | 309 | 2.04e-133 | 381 |
| Msa0292330 | AT1G32790.1 | 63.971 | 272 | 93 | 1 | 28 | 294 | 83 | 354 | 4.19e-123 | 356 |
| Msa0292330 | AT3G49390.2 | 64.179 | 268 | 90 | 4 | 28 | 294 | 87 | 349 | 3.83e-120 | 348 |
| Msa0292330 | AT3G49390.3 | 64.179 | 268 | 90 | 4 | 28 | 294 | 87 | 349 | 3.83e-120 | 348 |
| Msa0292330 | AT3G49390.1 | 64.179 | 268 | 90 | 4 | 28 | 294 | 87 | 349 | 3.83e-120 | 348 |
| Msa0292330 | AT4G10610.1 | 63.941 | 269 | 86 | 2 | 28 | 291 | 66 | 328 | 2.70e-119 | 346 |
| Msa0292330 | AT1G32790.2 | 62.692 | 260 | 92 | 1 | 28 | 282 | 83 | 342 | 2.07e-114 | 336 |
| Msa0292330 | AT1G32790.2 | 41.975 | 81 | 46 | 1 | 210 | 290 | 173 | 252 | 2.43e-14 | 73.2 |
| Msa0292330 | AT4G10610.2 | 62.791 | 258 | 85 | 2 | 28 | 280 | 66 | 317 | 2.90e-112 | 328 |
| Msa0292330 | AT4G10610.2 | 38.824 | 85 | 51 | 1 | 206 | 290 | 146 | 229 | 6.35e-12 | 65.5 |
| Msa0292330 | AT5G24440.1 | 52.837 | 282 | 120 | 2 | 17 | 289 | 36 | 313 | 2.49e-99 | 295 |
| Msa0292330 | AT5G24440.1 | 41.860 | 86 | 49 | 1 | 205 | 290 | 132 | 216 | 8.56e-14 | 71.2 |
Find 104 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCTCTAACTTAACTTTCT+AGG | 0.166323 | 2_3:+41375736 | Msa0292330:three_prime_UTR |
| ATTCTCTTCATTTCCATTTC+CGG | 0.182647 | 2_3:+41369851 | Msa0292330:five_prime_UTR |
| AGATGAGAGAGGAGAGAGTT+TGG | 0.192166 | 2_3:-41369788 | None:intergenic |
| GTTTCAGTTACTTGGTTATT+TGG | 0.204934 | 2_3:+41375813 | Msa0292330:three_prime_UTR |
| AAATGGAAATGAAGAGAATT+AGG | 0.215402 | 2_3:-41369847 | None:intergenic |
| AATCATACCCTTCGATTGTT+TGG | 0.222316 | 2_3:-41370397 | None:intergenic |
| CTGAATTCAGATTCAGCTTT+TGG | 0.224207 | 2_3:-41370211 | None:intergenic |
| TTAATAATATACTAAGAAAT+TGG | 0.229031 | 2_3:-41369897 | None:intergenic |
| TTAGAGCGCAGAACATTTAA+AGG | 0.234169 | 2_3:-41375722 | None:intergenic |
| GGTTACGCGCTTGAGGCTTT+TGG | 0.235319 | 2_3:+41374545 | Msa0292330:intron |
| TGAAATTTATATGATGAAAA+TGG | 0.243391 | 2_3:-41370080 | None:intergenic |
| TTGTCCACAATTGGTGAATA+AGG | 0.247931 | 2_3:-41371587 | None:intergenic |
| TTCTCTTCATTTCCATTTCC+GGG | 0.280238 | 2_3:+41369852 | Msa0292330:five_prime_UTR |
| AAACTGTAGCGGCATGCTTT+TGG | 0.294414 | 2_3:+41375375 | Msa0292330:CDS |
| GTTTGGAATAACAAAGGTTT+TGG | 0.298365 | 2_3:-41369771 | None:intergenic |
| AATCATGCCTTTCACCAGTT+TGG | 0.305370 | 2_3:+41375846 | Msa0292330:three_prime_UTR |
| CGTTCAACCTTCTCCTCCCT+TGG | 0.306807 | 2_3:-41371358 | None:intergenic |
| GCTTAGTGTTGACCAGAAAA+TGG | 0.311863 | 2_3:-41370354 | None:intergenic |
| TTGTACAAATATTGACAAAA+AGG | 0.314486 | 2_3:+41374100 | Msa0292330:CDS |
| TTCAGCTGATGCCAACAAAA+TGG | 0.330118 | 2_3:+41370180 | Msa0292330:CDS |
| ATCATACCCTTCGATTGTTT+GGG | 0.345576 | 2_3:-41370396 | None:intergenic |
| AATGGAAATGAAGAGAATTA+GGG | 0.376450 | 2_3:-41369846 | None:intergenic |
| GGCCTCACTGGAGTCTTTGA+AGG | 0.384362 | 2_3:-41375522 | None:intergenic |
| CGAGCAACCCTTGGCCTCAC+TGG | 0.390725 | 2_3:-41375534 | None:intergenic |
| GTAACTTACTTGTCCACAAT+TGG | 0.394700 | 2_3:-41371596 | None:intergenic |
| GTTATTTAGTTTCAGTTACT+TGG | 0.402397 | 2_3:+41375805 | Msa0292330:three_prime_UTR |
| AACCTTGGTGGTACTGTGCT+TGG | 0.416008 | 2_3:+41373823 | Msa0292330:CDS |
| CTTTCCAGTTGAGACTTGTA+TGG | 0.420211 | 2_3:+41375619 | Msa0292330:three_prime_UTR |
| ATGAAAATGGAAAGAGAAAA+CGG | 0.420392 | 2_3:-41370067 | None:intergenic |
| AAATAGTTTAAGACCAAGAC+TGG | 0.428164 | 2_3:-41375763 | None:intergenic |
| ATATTACATTGACCCGGAAA+TGG | 0.429552 | 2_3:-41369864 | None:intergenic |
| AATGCGGATCACCACAAATT+CGG | 0.432023 | 2_3:-41373607 | None:intergenic |
| CTTTCTAGGTACCCCAGTCT+TGG | 0.438937 | 2_3:+41375750 | Msa0292330:three_prime_UTR |
| TTTAATTTATTTATATATCT+GGG | 0.450356 | 2_3:+41370012 | Msa0292330:five_prime_UTR |
| ATGGTGTTAAATATCCAAAC+TGG | 0.451878 | 2_3:-41375860 | None:intergenic |
| GTTCAACCTTCTCCTCCCTT+GGG | 0.452495 | 2_3:-41371357 | None:intergenic |
| CTAAATATCCTCTCAAGTCT+TGG | 0.453675 | 2_3:-41375592 | None:intergenic |
| TGACGGCCATGATCATGATT+AGG | 0.454312 | 2_3:-41370307 | None:intergenic |
| GACACAAAGATGAAAATAAC+CGG | 0.458794 | 2_3:-41375669 | None:intergenic |
| ATTTGTACAATAGACAGTTC+TGG | 0.459054 | 2_3:-41374087 | None:intergenic |
| TCTTCCATACAAGTCTCAAC+TGG | 0.460888 | 2_3:-41375623 | None:intergenic |
| GTTCACAAAGCTGAATCCTT+TGG | 0.463673 | 2_3:+41370255 | Msa0292330:CDS |
| GAGAGAGTTTGGAATAACAA+AGG | 0.464902 | 2_3:-41369777 | None:intergenic |
| ATAATGGTACCAAACCTGAT+AGG | 0.472253 | 2_3:-41375406 | None:intergenic |
| GTCATTGATTGCCGAATTTG+TGG | 0.473392 | 2_3:+41373596 | Msa0292330:CDS |
| CCGATCGGTTAACGCGATAC+AGG | 0.479639 | 2_3:-41375558 | None:intergenic |
| TGAATCCTACATTCCTCCCC+AGG | 0.485315 | 2_3:+41373893 | Msa0292330:CDS |
| TTCGAAGGAAGGACCCTCAC+TGG | 0.492340 | 2_3:-41373853 | None:intergenic |
| CAAAGACTCCAGTGAGGCCA+AGG | 0.492377 | 2_3:+41375526 | Msa0292330:CDS |
| AGTTGAGACTTGTATGGAAG+AGG | 0.511196 | 2_3:+41375625 | Msa0292330:three_prime_UTR |
| GTGTTGACCAGAAAATGGTT+AGG | 0.517283 | 2_3:-41370349 | None:intergenic |
| CATACCCTGGGGAGGAATGT+AGG | 0.517978 | 2_3:-41373898 | None:intergenic |
| GGGAGGAATGTAGGATTCAC+AGG | 0.522132 | 2_3:-41373889 | None:intergenic |
| TATTCTCCTAATCATGATCA+TGG | 0.524419 | 2_3:+41370301 | Msa0292330:CDS |
| ATATCCTCTCAAGTCTTGGT+TGG | 0.524693 | 2_3:-41375588 | None:intergenic |
| GCAAGGGCAGCTTTAAACCT+TGG | 0.527689 | 2_3:+41373808 | Msa0292330:CDS |
| GCAGCCTTATTCACCAATTG+TGG | 0.527712 | 2_3:+41371583 | Msa0292330:CDS |
| TATGCAGTCGGATGATGAGC+GGG | 0.530361 | 2_3:+41374055 | Msa0292330:intron |
| TGATGAGATTAAACCCTTGA+CGG | 0.534141 | 2_3:-41370324 | None:intergenic |
| AAAACCACACAACACAAGGA+AGG | 0.535689 | 2_3:+41369723 | Msa0292330:five_prime_UTR |
| AAACCACACAACACAAGGAA+GGG | 0.538048 | 2_3:+41369724 | Msa0292330:five_prime_UTR |
| GAGAAAGAAAGAGATGAGAG+AGG | 0.539765 | 2_3:-41369799 | None:intergenic |
| ATCATGATCATGGCCGTCAA+GGG | 0.543640 | 2_3:+41370311 | Msa0292330:CDS |
| TTTCTTGGTTTAGGTTACTG+AGG | 0.557417 | 2_3:+41371552 | Msa0292330:intron |
| TTTCACAGGTTACGCGCTTG+AGG | 0.557575 | 2_3:+41374538 | Msa0292330:intron |
| CCTGTATCGCGTTAACCGAT+CGG | 0.562095 | 2_3:+41375558 | Msa0292330:exon |
| GATACAGGACGAGCAACCCT+TGG | 0.563628 | 2_3:-41375543 | None:intergenic |
| TAAATATCCAAACTGGTGAA+AGG | 0.567685 | 2_3:-41375853 | None:intergenic |
| AAAGCTGAATCCTTTGGCTA+AGG | 0.568332 | 2_3:+41370261 | Msa0292330:CDS |
| TCATGTCAACAGATGGTGCA+AGG | 0.569752 | 2_3:+41373791 | Msa0292330:intron |
| ATAATAACCCAAACAATCGA+AGG | 0.576301 | 2_3:+41370389 | Msa0292330:CDS |
| TGATTAGGAGAATAAGATGA+AGG | 0.576404 | 2_3:-41370292 | None:intergenic |
| GTTGAACGGAAGATCGCTAA+AGG | 0.577137 | 2_3:+41371373 | Msa0292330:CDS |
| TTTAACTTACACTGTCTCGT+TGG | 0.579243 | 2_3:-41369747 | None:intergenic |
| GGGTTATTATCATTAGCAGA+AGG | 0.581158 | 2_3:-41370376 | None:intergenic |
| CAATTCGAGTTGAATGCACC+TGG | 0.583914 | 2_3:-41374572 | None:intergenic |
| AACTTCTTTGAATCATCATG+TGG | 0.584423 | 2_3:+41374423 | Msa0292330:CDS |
| AGGAAAATATTACATTGACC+CGG | 0.587581 | 2_3:-41369870 | None:intergenic |
| TAGGCTTTAATTCTCTACCA+TGG | 0.588186 | 2_3:+41370135 | Msa0292330:exon |
| AATCATGATCATGGCCGTCA+AGG | 0.590810 | 2_3:+41370310 | Msa0292330:CDS |
| AGCAGTAACAACAGTTGCCA+TGG | 0.591951 | 2_3:-41370152 | None:intergenic |
| TGGTTTAGGTTACTGAGGAG+CGG | 0.592921 | 2_3:+41371557 | Msa0292330:intron |
| TGGCCCTTCCTTGTGTTGTG+TGG | 0.596526 | 2_3:-41369727 | None:intergenic |
| GGAATGTAGGATTCACAGGA+AGG | 0.618003 | 2_3:-41373885 | None:intergenic |
| TTGGTTGGACAATGTCCGAT+CGG | 0.620152 | 2_3:-41375573 | None:intergenic |
| AGGGCAGCTTTAAACCTTGG+TGG | 0.621096 | 2_3:+41373811 | Msa0292330:CDS |
| AATAGTTTAAGACCAAGACT+GGG | 0.622086 | 2_3:-41375762 | None:intergenic |
| CTTTGAATCATCATGTGGCG+AGG | 0.622886 | 2_3:+41374428 | Msa0292330:CDS |
| CATGTCAACAGATGGTGCAA+GGG | 0.627275 | 2_3:+41373792 | Msa0292330:intron |
| GCTTGGATACTATCCAGTGA+GGG | 0.628896 | 2_3:+41373840 | Msa0292330:CDS |
| AAAGACTCCAGTGAGGCCAA+GGG | 0.631851 | 2_3:+41375527 | Msa0292330:CDS |
| TTGTCCAACCAAGACTTGAG+AGG | 0.636876 | 2_3:+41375584 | Msa0292330:three_prime_UTR |
| AAAATATTCATACCCTGGGG+AGG | 0.643159 | 2_3:-41373906 | None:intergenic |
| TAATAACCCAAACAATCGAA+GGG | 0.646031 | 2_3:+41370390 | Msa0292330:CDS |
| ATATGCAGTCGGATGATGAG+CGG | 0.652163 | 2_3:+41374054 | Msa0292330:intron |
| GCTACAGTTTAGTGCAACAA+TGG | 0.660726 | 2_3:-41375362 | None:intergenic |
| GCAAAGCGAAGAACTGAATG+CGG | 0.663672 | 2_3:-41373623 | None:intergenic |
| CAAGGGAGGAGAAGGTTGAA+CGG | 0.663891 | 2_3:+41371359 | Msa0292330:CDS |
| GAATCCTACATTCCTCCCCA+GGG | 0.668990 | 2_3:+41373894 | Msa0292330:CDS |
| ATTGTTGCACTAAACTGTAG+CGG | 0.677875 | 2_3:+41375364 | Msa0292330:CDS |
| TGCTTGGATACTATCCAGTG+AGG | 0.696812 | 2_3:+41373839 | Msa0292330:CDS |
| ATCCAAGCACAGTACCACCA+AGG | 0.728153 | 2_3:-41373825 | None:intergenic |
| ATAGTTTAAGACCAAGACTG+GGG | 0.745112 | 2_3:-41375761 | None:intergenic |
| GTCCTTCAAAGACTCCAGTG+AGG | 0.760009 | 2_3:+41375520 | Msa0292330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTAT+GGG | - | chr2_3:41372421-41372440 | None:intergenic | 0.0% |
| !!! | ATTTTTTTTTTTTTTTTTTA+TGG | - | chr2_3:41372422-41372441 | None:intergenic | 0.0% |
| !! | ATAAAAAAAAAAAAAAAAAA+TGG | + | chr2_3:41372421-41372440 | Msa0292330:intron | 0.0% |
| !! | TTAATAATATACTAAGAAAT+TGG | - | chr2_3:41369900-41369919 | None:intergenic | 10.0% |
| !!! | TTTTGATTTTTTTTTTGTTT+TGG | + | chr2_3:41370567-41370586 | Msa0292330:intron | 10.0% |
| !! | AAAATAGTTTAAAAAAATGT+TGG | - | chr2_3:41371054-41371073 | None:intergenic | 10.0% |
| !!! | ATATTAAATTACTTTTTTGA+GGG | + | chr2_3:41372315-41372334 | Msa0292330:intron | 10.0% |
| !! | TTATAATTATTTAAATATGG+CGG | - | chr2_3:41373549-41373568 | None:intergenic | 10.0% |
| !!! | ACATAAAATCAAAAATATTT+TGG | + | chr2_3:41373964-41373983 | Msa0292330:intron | 10.0% |
| !!! | TATATTGTAACATATATTTT+TGG | + | chr2_3:41374161-41374180 | Msa0292330:intron | 10.0% |
| !!! | ATGAAATGATTATTTTATTA+TGG | - | chr2_3:41374459-41374478 | None:intergenic | 10.0% |
| !!! | CTTTAAAATATTTACAAAAT+AGG | - | chr2_3:41375224-41375243 | None:intergenic | 10.0% |
| !! | AAAAATGTAGAATTTACATA+AGG | - | chr2_3:41369995-41370014 | None:intergenic | 15.0% |
| !! | TGAAATTTATATGATGAAAA+TGG | - | chr2_3:41370083-41370102 | None:intergenic | 15.0% |
| !! | AAAAATAACAATCAAAATGA+GGG | - | chr2_3:41370437-41370456 | None:intergenic | 15.0% |
| !! | AAAAAATAACAATCAAAATG+AGG | - | chr2_3:41370438-41370457 | None:intergenic | 15.0% |
| !!! | GATATTAAATTACTTTTTTG+AGG | + | chr2_3:41372314-41372333 | Msa0292330:intron | 15.0% |
| !!! | TATTAAATTACTTTTTTGAG+GGG | + | chr2_3:41372316-41372335 | Msa0292330:intron | 15.0% |
| !! | AGTAATGAAATATGATTTAT+CGG | - | chr2_3:41372542-41372561 | None:intergenic | 15.0% |
| !! | CAATAAATGCATAAAATATT+AGG | - | chr2_3:41373451-41373470 | None:intergenic | 15.0% |
| !!! | CTAATATTTTATGCATTTAT+TGG | + | chr2_3:41373449-41373468 | Msa0292330:intron | 15.0% |
| !!! | TAACATTTTATTACATCATT+TGG | + | chr2_3:41373566-41373585 | Msa0292330:intron | 15.0% |
| !! | TAAAAGTTATTTATCTCAAA+AGG | + | chr2_3:41374488-41374507 | Msa0292330:intron | 15.0% |
| !! | TTAGTCAATACTTTATTAAT+TGG | + | chr2_3:41374635-41374654 | Msa0292330:intron | 15.0% |
| !!! | TATACTAAGAAATTGGTTTT+AGG | - | chr2_3:41369893-41369912 | None:intergenic | 20.0% |
| !!! | TGAAGATAATCACTTTTTTA+AGG | - | chr2_3:41370041-41370060 | None:intergenic | 20.0% |
| !! | TCAATTTAGTGAAATAAAGT+AGG | + | chr2_3:41370695-41370714 | Msa0292330:intron | 20.0% |
| !!! | TATGGAAAAAAATTCACTTT+TGG | + | chr2_3:41370752-41370771 | Msa0292330:intron | 20.0% |
| !! | CAAATTACAAACAAATAACA+CGG | - | chr2_3:41370878-41370897 | None:intergenic | 20.0% |
| !!! | TTTTCACATAACATATTCAT+AGG | - | chr2_3:41371202-41371221 | None:intergenic | 20.0% |
| !! | AAGATGGTGTTTAAATAATT+CGG | - | chr2_3:41371533-41371552 | None:intergenic | 20.0% |
| !!! | ACATAATAAAGCATCATAAT+AGG | - | chr2_3:41371772-41371791 | None:intergenic | 20.0% |
| !!! | AATGAAGAAATTGATAGTAA+CGG | - | chr2_3:41371835-41371854 | None:intergenic | 20.0% |
| !!! | ATTAAATTACTTTTTTGAGG+GGG | + | chr2_3:41372317-41372336 | Msa0292330:intron | 20.0% |
| !!! | AACTATGATCTCTTTAATTT+TGG | + | chr2_3:41373296-41373315 | Msa0292330:intron | 20.0% |
| !! | AGACAATATATAGAAGATAA+AGG | - | chr2_3:41373373-41373392 | None:intergenic | 20.0% |
| !! | CATGATCAAAATAATGAAAT+AGG | - | chr2_3:41373767-41373786 | None:intergenic | 20.0% |
| !!! | CTATTTCATTATTTTGATCA+TGG | + | chr2_3:41373765-41373784 | Msa0292330:intron | 20.0% |
| !! | AAATACAACCAATTATAGAA+AGG | - | chr2_3:41373937-41373956 | None:intergenic | 20.0% |
| !! | TTTCTATAATTGGTTGTATT+TGG | + | chr2_3:41373936-41373955 | Msa0292330:intron | 20.0% |
| !! | TTAAGAGAATCAATATACAA+AGG | - | chr2_3:41374005-41374024 | None:intergenic | 20.0% |
| !! | TTGTACAAATATTGACAAAA+AGG | + | chr2_3:41374100-41374119 | Msa0292330:CDS | 20.0% |
| !! | GGTTTAAAAGATTCAAAAAT+TGG | + | chr2_3:41374227-41374246 | Msa0292330:intron | 20.0% |
| !!! | TTATCTCAAAAGGTAAATTT+TGG | + | chr2_3:41374498-41374517 | Msa0292330:intron | 20.0% |
| !! | AACAAAGTTGAAGTTATTTA+TGG | - | chr2_3:41374698-41374717 | None:intergenic | 20.0% |
| !! | TAAATAAGTGCAAATTTAAG+TGG | + | chr2_3:41375175-41375194 | Msa0292330:intron | 20.0% |
| !! | CTGTCATTATTATATTAACT+TGG | + | chr2_3:41375276-41375295 | Msa0292330:intron | 20.0% |
| !!! | GATCATATTTTATTATCCTT+CGG | + | chr2_3:41375483-41375502 | Msa0292330:intron | 20.0% |
| ! | AATGGAAATGAAGAGAATTA+GGG | - | chr2_3:41369849-41369868 | None:intergenic | 25.0% |
| ! | AAATGGAAATGAAGAGAATT+AGG | - | chr2_3:41369850-41369869 | None:intergenic | 25.0% |
| ! | ATGAAAATGGAAAGAGAAAA+CGG | - | chr2_3:41370070-41370089 | None:intergenic | 25.0% |
| !!! | AACTTTTTAAGCGCTTTTTT+AGG | + | chr2_3:41370116-41370135 | Msa0292330:five_prime_UTR | 25.0% |
| !! | TTTTGTGATGATTTTTGTGA+TGG | + | chr2_3:41370482-41370501 | Msa0292330:intron | 25.0% |
| !! | TTTGTGATGATTTTTGTGAT+GGG | + | chr2_3:41370483-41370502 | Msa0292330:intron | 25.0% |
| ! | TTTCCAATCAACAAGATATA+GGG | - | chr2_3:41370633-41370652 | None:intergenic | 25.0% |
| !! | TTTTCCAATCAACAAGATAT+AGG | - | chr2_3:41370634-41370653 | None:intergenic | 25.0% |
| !!! | TTTTCTGCAGTTTTTTTGTA+TGG | + | chr2_3:41370654-41370673 | Msa0292330:intron | 25.0% |
| !!! | TATACAGACTCTTTGTTTTA+AGG | - | chr2_3:41370796-41370815 | None:intergenic | 25.0% |
| ! | TGAATATGTTATGTGAAAAC+TGG | + | chr2_3:41371203-41371222 | Msa0292330:intron | 25.0% |
| !! | CGGTTTTCTATTATCAAAAT+CGG | - | chr2_3:41371513-41371532 | None:intergenic | 25.0% |
| !! | ATTTAAACACCATCTTTTCT+TGG | + | chr2_3:41371537-41371556 | Msa0292330:intron | 25.0% |
| !! | TGCTTAATAATTTTCGACTA+CGG | + | chr2_3:41371663-41371682 | Msa0292330:intron | 25.0% |
| ! | TGTTCAACATAATTCACAAT+TGG | - | chr2_3:41371736-41371755 | None:intergenic | 25.0% |
| ! | TCAGTTTAATATCTGATATG+TGG | + | chr2_3:41372276-41372295 | Msa0292330:intron | 25.0% |
| ! | TTTAATATCGTATGACTCAT+TGG | - | chr2_3:41372303-41372322 | None:intergenic | 25.0% |
| !! | TAACAGATCTGCATTTTATT+CGG | - | chr2_3:41372516-41372535 | None:intergenic | 25.0% |
| !! | AGGGCATAATTTTCAAATTA+AGG | - | chr2_3:41372576-41372595 | None:intergenic | 25.0% |
| !!! | AAGCTTTTTATTGTTGTTAC+AGG | + | chr2_3:41372880-41372899 | Msa0292330:intron | 25.0% |
| !!! | AGCTTTTTATTGTTGTTACA+GGG | + | chr2_3:41372881-41372900 | Msa0292330:intron | 25.0% |
| ! | ATACAAAACACTGCATTTAA+GGG | - | chr2_3:41373019-41373038 | None:intergenic | 25.0% |
| ! | TAATTATTTAAATATGGCGG+TGG | - | chr2_3:41373546-41373565 | None:intergenic | 25.0% |
| ! | TATTACATCATTTGGATTGA+AGG | + | chr2_3:41373574-41373593 | Msa0292330:intron | 25.0% |
| ! | TTTCTGTTCCTTTCTATAAT+TGG | + | chr2_3:41373926-41373945 | Msa0292330:intron | 25.0% |
| ! | TATAATTGGTTGTATTTGGA+TGG | + | chr2_3:41373940-41373959 | Msa0292330:intron | 25.0% |
| ! | ACTGCATATTACAAAAGAAA+CGG | - | chr2_3:41374043-41374062 | None:intergenic | 25.0% |
| !! | TTTCTTTTGTAATATGCAGT+CGG | + | chr2_3:41374043-41374062 | Msa0292330:intron | 25.0% |
| !!! | GGTAAAACTACTTTTAGTTT+AGG | + | chr2_3:41374182-41374201 | Msa0292330:intron | 25.0% |
| !! | AATCTTTTAAACCATTTGAG+CGG | - | chr2_3:41374220-41374239 | None:intergenic | 25.0% |
| ! | ATAATGCATCCATGAATTAT+CGG | + | chr2_3:41374307-41374326 | Msa0292330:intron | 25.0% |
| ! | TAATTAGTGTTGTCAAATTG+TGG | + | chr2_3:41374852-41374871 | Msa0292330:intron | 25.0% |
| ! | TTTGCACTTATTTAAATGAC+TGG | - | chr2_3:41375169-41375188 | None:intergenic | 25.0% |
| !! | GTTATTTAGTTTCAGTTACT+TGG | + | chr2_3:41375805-41375824 | Msa0292330:three_prime_UTR | 25.0% |
| !! | GTTTGGAATAACAAAGGTTT+TGG | - | chr2_3:41369774-41369793 | None:intergenic | 30.0% |
| ATTCTCTTCATTTCCATTTC+CGG | + | chr2_3:41369851-41369870 | Msa0292330:five_prime_UTR | 30.0% | |
| AGGAAAATATTACATTGACC+CGG | - | chr2_3:41369873-41369892 | None:intergenic | 30.0% | |
| !!! | TTTCTGGTTTTTTCTGAAAC+TGG | + | chr2_3:41369939-41369958 | Msa0292330:five_prime_UTR | 30.0% |
| !!! | TTCTGGTTTTTTCTGAAACT+GGG | + | chr2_3:41369940-41369959 | Msa0292330:five_prime_UTR | 30.0% |
| TGATTAGGAGAATAAGATGA+AGG | - | chr2_3:41370295-41370314 | None:intergenic | 30.0% | |
| TATTCTCCTAATCATGATCA+TGG | + | chr2_3:41370301-41370320 | Msa0292330:CDS | 30.0% | |
| ATAATAACCCAAACAATCGA+AGG | + | chr2_3:41370389-41370408 | Msa0292330:CDS | 30.0% | |
| TAATAACCCAAACAATCGAA+GGG | + | chr2_3:41370390-41370409 | Msa0292330:CDS | 30.0% | |
| AAACCCTATATCTTGTTGAT+TGG | + | chr2_3:41370627-41370646 | Msa0292330:intron | 30.0% | |
| AGGAATTGTTATCTGTGATA+TGG | + | chr2_3:41370734-41370753 | Msa0292330:intron | 30.0% | |
| ! | TGTCGTTATTTCGATTTCAT+TGG | + | chr2_3:41371028-41371047 | Msa0292330:intron | 30.0% |
| CACAGAAAATGACAATATCA+GGG | - | chr2_3:41371290-41371309 | None:intergenic | 30.0% | |
| ACACAGAAAATGACAATATC+AGG | - | chr2_3:41371291-41371310 | None:intergenic | 30.0% | |
| TAACCTAAACCAAGAAAAGA+TGG | - | chr2_3:41371549-41371568 | None:intergenic | 30.0% | |
| AACATAATTCACAATTGGAG+GGG | - | chr2_3:41371731-41371750 | None:intergenic | 30.0% | |
| CAACATAATTCACAATTGGA+GGG | - | chr2_3:41371732-41371751 | None:intergenic | 30.0% | |
| TCAACATAATTCACAATTGG+AGG | - | chr2_3:41371733-41371752 | None:intergenic | 30.0% | |
| GAGGTTTAGGAGAAATTAAT+GGG | - | chr2_3:41371966-41371985 | None:intergenic | 30.0% | |
| TGAGGTTTAGGAGAAATTAA+TGG | - | chr2_3:41371967-41371986 | None:intergenic | 30.0% | |
| AATCCTACTATATGAGGTTT+AGG | - | chr2_3:41371979-41371998 | None:intergenic | 30.0% | |
| ACAGACAAAAAAATGCATCT+AGG | + | chr2_3:41372119-41372138 | Msa0292330:intron | 30.0% | |
| TACATTTGATCTTAGCCAAA+AGG | - | chr2_3:41372243-41372262 | None:intergenic | 30.0% | |
| !!! | GATTTTTTTCTCAACAGCTA+TGG | + | chr2_3:41372703-41372722 | Msa0292330:intron | 30.0% |
| ! | CGTTTTATGACAGCTTAAAA+TGG | + | chr2_3:41372763-41372782 | Msa0292330:intron | 30.0% |
| ! | CAGCTTAAAATGGAGAATTT+TGG | + | chr2_3:41372773-41372792 | Msa0292330:intron | 30.0% |
| AATAAAAAGCTTTCTACCTC+TGG | - | chr2_3:41372872-41372891 | None:intergenic | 30.0% | |
| !! | TTTTTATTGTTGTTACAGGG+AGG | + | chr2_3:41372884-41372903 | Msa0292330:intron | 30.0% |
| CATACAAAACACTGCATTTA+AGG | - | chr2_3:41373020-41373039 | None:intergenic | 30.0% | |
| CACAATCAAAACGAATCAAA+AGG | - | chr2_3:41373252-41373271 | None:intergenic | 30.0% | |
| ACAGAAAATATTCATACCCT+GGG | - | chr2_3:41373913-41373932 | None:intergenic | 30.0% | |
| AACAGAAAATATTCATACCC+TGG | - | chr2_3:41373914-41373933 | None:intergenic | 30.0% | |
| ATTTGTACAATAGACAGTTC+TGG | - | chr2_3:41374090-41374109 | None:intergenic | 30.0% | |
| !! | GTCATTTTAACATGTTTACC+AGG | + | chr2_3:41374279-41374298 | Msa0292330:intron | 30.0% |
| AACTTCTTTGAATCATCATG+TGG | + | chr2_3:41374423-41374442 | Msa0292330:CDS | 30.0% | |
| AGTTGAAGTTATTTATGGTG+CGG | - | chr2_3:41374693-41374712 | None:intergenic | 30.0% | |
| AGAAAGGAAGAAAATCATGA+TGG | - | chr2_3:41374742-41374761 | None:intergenic | 30.0% | |
| !! | TACAAAGTGTTGTCAAATAG+CGG | + | chr2_3:41374932-41374951 | Msa0292330:intron | 30.0% |
| ! | AATACTAGTGTTGTTAGTCA+TGG | - | chr2_3:41375009-41375028 | None:intergenic | 30.0% |
| GCGTCAATAAGGAAAATAAA+GGG | - | chr2_3:41375073-41375092 | None:intergenic | 30.0% | |
| GCGTAGTTGTTAATTAAGTA+GGG | + | chr2_3:41375091-41375110 | Msa0292330:intron | 30.0% | |
| CGTAGTTGTTAATTAAGTAG+GGG | + | chr2_3:41375092-41375111 | Msa0292330:intron | 30.0% | |
| CTCAAGAAGGAAGAAATAAA+CGG | - | chr2_3:41375329-41375348 | None:intergenic | 30.0% | |
| CAAAAACTATCCTCCAATAA+TGG | - | chr2_3:41375425-41375444 | None:intergenic | 30.0% | |
| GACACAAAGATGAAAATAAC+CGG | - | chr2_3:41375672-41375691 | None:intergenic | 30.0% | |
| ! | AATAGTTTAAGACCAAGACT+GGG | - | chr2_3:41375765-41375784 | None:intergenic | 30.0% |
| ! | AAATAGTTTAAGACCAAGAC+TGG | - | chr2_3:41375766-41375785 | None:intergenic | 30.0% |
| GTTTCAGTTACTTGGTTATT+TGG | + | chr2_3:41375813-41375832 | Msa0292330:three_prime_UTR | 30.0% | |
| ! | TTTAACTTACACTGTCTCGT+TGG | - | chr2_3:41369750-41369769 | None:intergenic | 35.0% |
| ! | GAGAGAGTTTGGAATAACAA+AGG | - | chr2_3:41369780-41369799 | None:intergenic | 35.0% |
| TTCTCTTCATTTCCATTTCC+GGG | + | chr2_3:41369852-41369871 | Msa0292330:five_prime_UTR | 35.0% | |
| ATATTACATTGACCCGGAAA+TGG | - | chr2_3:41369867-41369886 | None:intergenic | 35.0% | |
| ! | TAGGCTTTAATTCTCTACCA+TGG | + | chr2_3:41370135-41370154 | Msa0292330:exon | 35.0% |
| !!! | TGGTTTTGAGTCCATTTTGT+TGG | - | chr2_3:41370194-41370213 | None:intergenic | 35.0% |
| ! | CTGAATTCAGATTCAGCTTT+TGG | - | chr2_3:41370214-41370233 | None:intergenic | 35.0% |
| TGATGAGATTAAACCCTTGA+CGG | - | chr2_3:41370327-41370346 | None:intergenic | 35.0% | |
| GGGTTATTATCATTAGCAGA+AGG | - | chr2_3:41370379-41370398 | None:intergenic | 35.0% | |
| ATCATACCCTTCGATTGTTT+GGG | - | chr2_3:41370399-41370418 | None:intergenic | 35.0% | |
| AATCATACCCTTCGATTGTT+TGG | - | chr2_3:41370400-41370419 | None:intergenic | 35.0% | |
| CAATCAAAATGAGGGATCAA+AGG | - | chr2_3:41370429-41370448 | None:intergenic | 35.0% | |
| !!! | GCAGTTTTTTTGTATGGTGA+AGG | + | chr2_3:41370660-41370679 | Msa0292330:intron | 35.0% |
| AGATAACAATTCCTGATGCA+TGG | - | chr2_3:41370728-41370747 | None:intergenic | 35.0% | |
| ! | ATTTGTGTTTGCTACATTCG+TGG | + | chr2_3:41370893-41370912 | Msa0292330:intron | 35.0% |
| ACTGAAATTGTCGAAGATTG+CGG | - | chr2_3:41370956-41370975 | None:intergenic | 35.0% | |
| ! | AGGAGAAACAATTTTACCCA+AGG | + | chr2_3:41371341-41371360 | Msa0292330:CDS | 35.0% |
| ! | GGAGAAACAATTTTACCCAA+GGG | + | chr2_3:41371342-41371361 | Msa0292330:CDS | 35.0% |
| ! | ACACCATCTTTTCTTGGTTT+AGG | + | chr2_3:41371543-41371562 | Msa0292330:intron | 35.0% |
| ! | TTTCTTGGTTTAGGTTACTG+AGG | + | chr2_3:41371552-41371571 | Msa0292330:intron | 35.0% |
| TTGTCCACAATTGGTGAATA+AGG | - | chr2_3:41371590-41371609 | None:intergenic | 35.0% | |
| GTAACTTACTTGTCCACAAT+TGG | - | chr2_3:41371599-41371618 | None:intergenic | 35.0% | |
| ! | ACGAGTCTTCATTGATAGTT+TGG | + | chr2_3:41371617-41371636 | Msa0292330:intron | 35.0% |
| ! | CATTGATAGTTTGGTTAGCA+TGG | + | chr2_3:41371626-41371645 | Msa0292330:intron | 35.0% |
| ACATAATTCACAATTGGAGG+GGG | - | chr2_3:41371730-41371749 | None:intergenic | 35.0% | |
| AATTTCTTCATTCAGCTACG+TGG | + | chr2_3:41371843-41371862 | Msa0292330:intron | 35.0% | |
| TACATGCTTACTCTTGAGTT+TGG | + | chr2_3:41371889-41371908 | Msa0292330:intron | 35.0% | |
| ! | GTTTGGTAATCTGAGTTATG+AGG | + | chr2_3:41371906-41371925 | Msa0292330:intron | 35.0% |
| TCTCCTAAACCTCATATAGT+AGG | + | chr2_3:41371973-41371992 | Msa0292330:intron | 35.0% | |
| ACGAACAATCCTACTATATG+AGG | - | chr2_3:41371985-41372004 | None:intergenic | 35.0% | |
| TTCGTAAAGCTTAACTGAAC+TGG | + | chr2_3:41372000-41372019 | Msa0292330:intron | 35.0% | |
| !! | CAAGCCTAACAATTTTGGTA+TGG | - | chr2_3:41372026-41372045 | None:intergenic | 35.0% |
| GTGAAATACGCTGTTGTAAA+TGG | + | chr2_3:41372197-41372216 | Msa0292330:intron | 35.0% | |
| AGAAGCAGTGTGTCAAATAT+CGG | + | chr2_3:41372659-41372678 | Msa0292330:intron | 35.0% | |
| CCAATTTGTGAAAGATTGCA+GGG | + | chr2_3:41372726-41372745 | Msa0292330:intron | 35.0% | |
| !!! | GCTTTGTGAGTTTTGTTGTA+TGG | - | chr2_3:41372928-41372947 | None:intergenic | 35.0% |
| AAAACTCACAAAGCGATAGA+GGG | + | chr2_3:41372934-41372953 | Msa0292330:intron | 35.0% | |
| AACACTGCATTTAAGGGTTT+GGG | - | chr2_3:41373013-41373032 | None:intergenic | 35.0% | |
| AAACACTGCATTTAAGGGTT+TGG | - | chr2_3:41373014-41373033 | None:intergenic | 35.0% | |
| CTTGGTTAAAAGATCGTCAT+AGG | - | chr2_3:41373134-41373153 | None:intergenic | 35.0% | |
| TAACACATAGTAGGATCACA+TGG | - | chr2_3:41373189-41373208 | None:intergenic | 35.0% | |
| TGTGATCCTACTATGTGTTA+AGG | + | chr2_3:41373189-41373208 | Msa0292330:intron | 35.0% | |
| ATTGTGCCTTAACACATAGT+AGG | - | chr2_3:41373198-41373217 | None:intergenic | 35.0% | |
| !!! | TGATTCGTTTTGATTGTGTC+TGG | + | chr2_3:41373254-41373273 | Msa0292330:intron | 35.0% |
| AGTTGAATTGTCGAAGAGAA+AGG | - | chr2_3:41373397-41373416 | None:intergenic | 35.0% | |
| TTACATCACCAAAAAACACG+TGG | + | chr2_3:41373708-41373727 | Msa0292330:intron | 35.0% | |
| TACATCACCAAAAAACACGT+GGG | + | chr2_3:41373709-41373728 | Msa0292330:intron | 35.0% | |
| ATGGAATTCATGTCAACAGA+TGG | + | chr2_3:41373784-41373803 | Msa0292330:intron | 35.0% | |
| CAGAAAATATTCATACCCTG+GGG | - | chr2_3:41373912-41373931 | None:intergenic | 35.0% | |
| ATAATTGTTGACCGCTCAAA+TGG | + | chr2_3:41374206-41374225 | Msa0292330:intron | 35.0% | |
| GGTTAATAAGTAGCACTTCT+TGG | + | chr2_3:41374248-41374267 | Msa0292330:intron | 35.0% | |
| CATGTAACTCCGATAATTCA+TGG | - | chr2_3:41374319-41374338 | None:intergenic | 35.0% | |
| !! | TTCAACTCGAATTGCTTTTG+TGG | + | chr2_3:41374581-41374600 | Msa0292330:CDS | 35.0% |
| ! | TGCTTTTGTGGAATTTGCAA+TGG | + | chr2_3:41374593-41374612 | Msa0292330:CDS | 35.0% |
| GCGAGACAGATAATTAAGAA+AGG | - | chr2_3:41374758-41374777 | None:intergenic | 35.0% | |
| CTTTACAAGAACAATCCACT+GGG | - | chr2_3:41374813-41374832 | None:intergenic | 35.0% | |
| CGCGTCAATAAGGAAAATAA+AGG | - | chr2_3:41375074-41375093 | None:intergenic | 35.0% | |
| TTAACAACTACGCGTCAATA+AGG | - | chr2_3:41375084-41375103 | None:intergenic | 35.0% | |
| CGCGTAGTTGTTAATTAAGT+AGG | + | chr2_3:41375090-41375109 | Msa0292330:intron | 35.0% | |
| ! | TTATTTCTTCCTTCTTGAGC+AGG | + | chr2_3:41375330-41375349 | Msa0292330:intron | 35.0% |
| ATTGTTGCACTAAACTGTAG+CGG | + | chr2_3:41375364-41375383 | Msa0292330:CDS | 35.0% | |
| ATAATGGTACCAAACCTGAT+AGG | - | chr2_3:41375409-41375428 | None:intergenic | 35.0% | |
| ! | ATCAGGTTTGGTACCATTAT+TGG | + | chr2_3:41375409-41375428 | Msa0292330:intron | 35.0% |
| TATTATCCTTCGGATTCTGT+AGG | + | chr2_3:41375493-41375512 | Msa0292330:intron | 35.0% | |
| ATTATCCTTCGGATTCTGTA+GGG | + | chr2_3:41375494-41375513 | Msa0292330:intron | 35.0% | |
| CTAAATATCCTCTCAAGTCT+TGG | - | chr2_3:41375595-41375614 | None:intergenic | 35.0% | |
| !! | GTGAAACTGTCTTTTGTTTC+CGG | + | chr2_3:41375650-41375669 | Msa0292330:three_prime_UTR | 35.0% |
| TTAGAGCGCAGAACATTTAA+AGG | - | chr2_3:41375725-41375744 | None:intergenic | 35.0% | |
| ! | ATAGTTTAAGACCAAGACTG+GGG | - | chr2_3:41375764-41375783 | None:intergenic | 35.0% |
| AAAACCACACAACACAAGGA+AGG | + | chr2_3:41369723-41369742 | Msa0292330:five_prime_UTR | 40.0% | |
| AAACCACACAACACAAGGAA+GGG | + | chr2_3:41369724-41369743 | Msa0292330:five_prime_UTR | 40.0% | |
| GAGAAAGAAAGAGATGAGAG+AGG | - | chr2_3:41369802-41369821 | None:intergenic | 40.0% | |
| ! | AGCGTGATTTTGTTCGTTTC+TGG | + | chr2_3:41369923-41369942 | Msa0292330:five_prime_UTR | 40.0% |
| TTCAGCTGATGCCAACAAAA+TGG | + | chr2_3:41370180-41370199 | Msa0292330:CDS | 40.0% | |
| GTTCACAAAGCTGAATCCTT+TGG | + | chr2_3:41370255-41370274 | Msa0292330:CDS | 40.0% | |
| AAAGCTGAATCCTTTGGCTA+AGG | + | chr2_3:41370261-41370280 | Msa0292330:CDS | 40.0% | |
| GGAAAAAACTCCTTAGCCAA+AGG | - | chr2_3:41370274-41370293 | None:intergenic | 40.0% | |
| ! | CATCACTCCTAACCATTTTC+TGG | + | chr2_3:41370342-41370361 | Msa0292330:CDS | 40.0% |
| ! | GTGTTGACCAGAAAATGGTT+AGG | - | chr2_3:41370352-41370371 | None:intergenic | 40.0% |
| !! | GCTTAGTGTTGACCAGAAAA+TGG | - | chr2_3:41370357-41370376 | None:intergenic | 40.0% |
| ! | TGAATTGTGTTTGTGCTGCT+TGG | + | chr2_3:41370533-41370552 | Msa0292330:intron | 40.0% |
| CTGCATTGTGATGGCATTTA+TGG | + | chr2_3:41370919-41370938 | Msa0292330:intron | 40.0% | |
| ATACGACACGTATCATGCTA+TGG | + | chr2_3:41371172-41371191 | Msa0292330:intron | 40.0% | |
| ! | ATTGTTTCTCCTCTGCAAGA+GGG | - | chr2_3:41371333-41371352 | None:intergenic | 40.0% |
| ! | AATTGTTTCTCCTCTGCAAG+AGG | - | chr2_3:41371334-41371353 | None:intergenic | 40.0% |
| ! | GAAACAATTTTACCCAAGGG+AGG | + | chr2_3:41371345-41371364 | Msa0292330:CDS | 40.0% |
| AGACAGTATTCCAATGTTGC+TGG | + | chr2_3:41371698-41371717 | Msa0292330:intron | 40.0% | |
| CATAATTCACAATTGGAGGG+GGG | - | chr2_3:41371729-41371748 | None:intergenic | 40.0% | |
| CTGGCCATACCAAAATTGTT+AGG | + | chr2_3:41372019-41372038 | Msa0292330:intron | 40.0% | |
| ! | GGTGTCAAGCCTAACAATTT+TGG | - | chr2_3:41372031-41372050 | None:intergenic | 40.0% |
| !! | TGGTGTCGATATACCTTTCT+CGG | + | chr2_3:41372217-41372236 | Msa0292330:intron | 40.0% |
| ! | ATATACCTTTCTCGGCCTTT+TGG | + | chr2_3:41372225-41372244 | Msa0292330:intron | 40.0% |
| !!! | ATTACTTTTTTGAGGGGGAG+AGG | + | chr2_3:41372322-41372341 | Msa0292330:intron | 40.0% |
| GCCAATTTGTGAAAGATTGC+AGG | + | chr2_3:41372725-41372744 | Msa0292330:intron | 40.0% | |
| CCCTGCAATCTTTCACAAAT+TGG | - | chr2_3:41372729-41372748 | None:intergenic | 40.0% | |
| !!! | AGAATTTTGGCTTTCTGCCA+TGG | + | chr2_3:41372786-41372805 | Msa0292330:intron | 40.0% |
| ! | GCAGTGTTATCGATTACAGA+TGG | - | chr2_3:41372816-41372835 | None:intergenic | 40.0% |
| TGTAAGTTATGCATCACCAG+AGG | + | chr2_3:41372853-41372872 | Msa0292330:intron | 40.0% | |
| CAAAACTCACAAAGCGATAG+AGG | + | chr2_3:41372933-41372952 | Msa0292330:intron | 40.0% | |
| ! | ATCCAGGTCAGATTTTCGAT+GGG | - | chr2_3:41372983-41373002 | None:intergenic | 40.0% |
| ! | AATCCAGGTCAGATTTTCGA+TGG | - | chr2_3:41372984-41373003 | None:intergenic | 40.0% |
| TTAACCAAGTCCACACTAGA+AGG | + | chr2_3:41373145-41373164 | Msa0292330:intron | 40.0% | |
| TAACCAAGTCCACACTAGAA+GGG | + | chr2_3:41373146-41373165 | Msa0292330:intron | 40.0% | |
| TTGTGTCTGGACTGTGAATT+TGG | + | chr2_3:41373267-41373286 | Msa0292330:intron | 40.0% | |
| ! | GTCATTGATTGCCGAATTTG+TGG | + | chr2_3:41373596-41373615 | Msa0292330:CDS | 40.0% |
| AATGCGGATCACCACAAATT+CGG | - | chr2_3:41373610-41373629 | None:intergenic | 40.0% | |
| AAAATATTCATACCCTGGGG+AGG | - | chr2_3:41373909-41373928 | None:intergenic | 40.0% | |
| ATGGATGCATTATGCTATCC+TGG | - | chr2_3:41374300-41374319 | None:intergenic | 40.0% | |
| ACATTGCCTTTCCATTTCAC+AGG | + | chr2_3:41374524-41374543 | Msa0292330:intron | 40.0% | |
| CCTTTACAAGAACAATCCAC+TGG | - | chr2_3:41374814-41374833 | None:intergenic | 40.0% | |
| !! | CCAGTGGATTGTTCTTGTAA+AGG | + | chr2_3:41374811-41374830 | Msa0292330:intron | 40.0% |
| GTTTGAATTTCACTACGCTG+CGG | - | chr2_3:41374966-41374985 | None:intergenic | 40.0% | |
| AAAGCGTGTTTGCAATGCAA+TGG | + | chr2_3:41375041-41375060 | Msa0292330:intron | 40.0% | |
| AATGATTCATGCACGTGATG+AGG | - | chr2_3:41375140-41375159 | None:intergenic | 40.0% | |
| AAGTGCAAATTTAAGTGGCG+TGG | + | chr2_3:41375180-41375199 | Msa0292330:intron | 40.0% | |
| AGAGAAACCGATATGTTGAC+TGG | + | chr2_3:41375303-41375322 | Msa0292330:intron | 40.0% | |
| TAAACGGCCAGTCAACATAT+CGG | - | chr2_3:41375313-41375332 | None:intergenic | 40.0% | |
| GCTACAGTTTAGTGCAACAA+TGG | - | chr2_3:41375365-41375384 | None:intergenic | 40.0% | |
| ! | AGGTTTGGTACCATTATTGG+AGG | + | chr2_3:41375412-41375431 | Msa0292330:intron | 40.0% |
| ATATCCTCTCAAGTCTTGGT+TGG | - | chr2_3:41375591-41375610 | None:intergenic | 40.0% | |
| CTTTCCAGTTGAGACTTGTA+TGG | + | chr2_3:41375619-41375638 | Msa0292330:three_prime_UTR | 40.0% | |
| TCTTCCATACAAGTCTCAAC+TGG | - | chr2_3:41375626-41375645 | None:intergenic | 40.0% | |
| AGTTGAGACTTGTATGGAAG+AGG | + | chr2_3:41375625-41375644 | Msa0292330:three_prime_UTR | 40.0% | |
| GCGCTCTAACTTAACTTTCT+AGG | + | chr2_3:41375736-41375755 | Msa0292330:three_prime_UTR | 40.0% | |
| AATCATGCCTTTCACCAGTT+TGG | + | chr2_3:41375846-41375865 | Msa0292330:three_prime_UTR | 40.0% | |
| AGATGAGAGAGGAGAGAGTT+TGG | - | chr2_3:41369791-41369810 | None:intergenic | 45.0% | |
| AGCAGTAACAACAGTTGCCA+TGG | - | chr2_3:41370155-41370174 | None:intergenic | 45.0% | |
| TGACGGCCATGATCATGATT+AGG | - | chr2_3:41370310-41370329 | None:intergenic | 45.0% | |
| AATCATGATCATGGCCGTCA+AGG | + | chr2_3:41370310-41370329 | Msa0292330:CDS | 45.0% | |
| ATCATGATCATGGCCGTCAA+GGG | + | chr2_3:41370311-41370330 | Msa0292330:CDS | 45.0% | |
| TAGGAGAGAAACCATGCATC+AGG | + | chr2_3:41370714-41370733 | Msa0292330:intron | 45.0% | |
| ! | ATTTTACCCAAGGGAGGAGA+AGG | + | chr2_3:41371351-41371370 | Msa0292330:CDS | 45.0% |
| GTTGAACGGAAGATCGCTAA+AGG | + | chr2_3:41371373-41371392 | Msa0292330:CDS | 45.0% | |
| ! | TGGTTTAGGTTACTGAGGAG+CGG | + | chr2_3:41371557-41371576 | Msa0292330:intron | 45.0% |
| !! | GCAGCCTTATTCACCAATTG+TGG | + | chr2_3:41371583-41371602 | Msa0292330:CDS | 45.0% |
| !!! | TTTTTTTTATGGGGTGCGCC+TGG | - | chr2_3:41372411-41372430 | None:intergenic | 45.0% |
| TGGGATAGTCTGTTGTGTGT+GGG | - | chr2_3:41372601-41372620 | None:intergenic | 45.0% | |
| TTGGGATAGTCTGTTGTGTG+TGG | - | chr2_3:41372602-41372621 | None:intergenic | 45.0% | |
| ! | TGACTGTGTGTGCGTCTTTT+GGG | - | chr2_3:41372620-41372639 | None:intergenic | 45.0% |
| AGTGTGTCAAATATCGGCCA+TGG | + | chr2_3:41372665-41372684 | Msa0292330:intron | 45.0% | |
| CATAAAACGTCATCGCGTTG+CGG | - | chr2_3:41372752-41372771 | None:intergenic | 45.0% | |
| TTGTTACAGGGAGGTCATGA+AGG | + | chr2_3:41372893-41372912 | Msa0292330:intron | 45.0% | |
| ! | CTACAATGTGTTTTCCGCAG+TGG | + | chr2_3:41372957-41372976 | Msa0292330:intron | 45.0% |
| CGTAGTAATGCTTCGTTCTC+AGG | + | chr2_3:41373060-41373079 | Msa0292330:intron | 45.0% | |
| CTTCGTTCTCAGGATCGAAA+TGG | + | chr2_3:41373070-41373089 | Msa0292330:intron | 45.0% | |
| AACCAAGTCCACACTAGAAG+GGG | + | chr2_3:41373147-41373166 | Msa0292330:intron | 45.0% | |
| AGAAGGGGAGGAATACTCAT+AGG | + | chr2_3:41373162-41373181 | Msa0292330:intron | 45.0% | |
| GCAAAGCGAAGAACTGAATG+CGG | - | chr2_3:41373626-41373645 | None:intergenic | 45.0% | |
| TCATGTCAACAGATGGTGCA+AGG | + | chr2_3:41373791-41373810 | Msa0292330:intron | 45.0% | |
| CATGTCAACAGATGGTGCAA+GGG | + | chr2_3:41373792-41373811 | Msa0292330:intron | 45.0% | |
| TGCTTGGATACTATCCAGTG+AGG | + | chr2_3:41373839-41373858 | Msa0292330:CDS | 45.0% | |
| GCTTGGATACTATCCAGTGA+GGG | + | chr2_3:41373840-41373859 | Msa0292330:CDS | 45.0% | |
| ! | GGATAGCAGTTTTCGAAGGA+AGG | - | chr2_3:41373867-41373886 | None:intergenic | 45.0% |
| ! | GGAAGGATAGCAGTTTTCGA+AGG | - | chr2_3:41373871-41373890 | None:intergenic | 45.0% |
| GGAATGTAGGATTCACAGGA+AGG | - | chr2_3:41373888-41373907 | None:intergenic | 45.0% | |
| ATATGCAGTCGGATGATGAG+CGG | + | chr2_3:41374054-41374073 | Msa0292330:intron | 45.0% | |
| CTTTGAATCATCATGTGGCG+AGG | + | chr2_3:41374428-41374447 | Msa0292330:CDS | 45.0% | |
| GCGTAACCTGTGAAATGGAA+AGG | - | chr2_3:41374533-41374552 | None:intergenic | 45.0% | |
| !! | CAATTCGAGTTGAATGCACC+TGG | - | chr2_3:41374575-41374594 | None:intergenic | 45.0% |
| AAGTGTGCCTCGAAATGCAT+AGG | - | chr2_3:41374785-41374804 | None:intergenic | 45.0% | |
| ! | AAACTGTAGCGGCATGCTTT+TGG | + | chr2_3:41375375-41375394 | Msa0292330:CDS | 45.0% |
| ! | AACTGTAGCGGCATGCTTTT+GGG | + | chr2_3:41375376-41375395 | Msa0292330:CDS | 45.0% |
| !! | TTTTGGGAACTCAGCCTATC+AGG | + | chr2_3:41375392-41375411 | Msa0292330:CDS | 45.0% |
| ACTTACCCTACAGAATCCGA+AGG | - | chr2_3:41375502-41375521 | None:intergenic | 45.0% | |
| TTGGTTGGACAATGTCCGAT+CGG | - | chr2_3:41375576-41375595 | None:intergenic | 45.0% | |
| TTGTCCAACCAAGACTTGAG+AGG | + | chr2_3:41375584-41375603 | Msa0292330:three_prime_UTR | 45.0% | |
| !!! | TTTTAATTTATTTATATATC+TGG | + | chr2_3:41370011-41370030 | Msa0292330:five_prime_UTR | 5.0% |
| !!! | TTTAATTTATTTATATATCT+GGG | + | chr2_3:41370012-41370031 | Msa0292330:five_prime_UTR | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTATG+GGG | - | chr2_3:41372420-41372439 | None:intergenic | 5.0% |
| !! | ATGTTATAATTATTTAAATA+TGG | - | chr2_3:41373552-41373571 | None:intergenic | 5.0% |
| GTTCAACCTTCTCCTCCCTT+GGG | - | chr2_3:41371360-41371379 | None:intergenic | 50.0% | |
| CAAGGGAGGAGAAGGTTGAA+CGG | + | chr2_3:41371359-41371378 | Msa0292330:CDS | 50.0% | |
| GGGGGAAATTCCAGCAACAT+TGG | - | chr2_3:41371711-41371730 | None:intergenic | 50.0% | |
| TTAGGCTTGACACCTTCTCC+CGG | + | chr2_3:41372037-41372056 | Msa0292330:intron | 50.0% | |
| GAAACTCACACACAACTGCG+AGG | - | chr2_3:41372077-41372096 | None:intergenic | 50.0% | |
| CTTAGCCAAAAGGCCGAGAA+AGG | - | chr2_3:41372233-41372252 | None:intergenic | 50.0% | |
| !! | TCACCTCAGTAGCTTGCTAC+TGG | + | chr2_3:41372345-41372364 | Msa0292330:intron | 50.0% |
| AGTCCAGTAGCAAGCTACTG+AGG | - | chr2_3:41372351-41372370 | None:intergenic | 50.0% | |
| GTTGCACTATTGCATGAGCC+AGG | + | chr2_3:41372390-41372409 | Msa0292330:intron | 50.0% | |
| GGATAGTCTGTTGTGTGTGG+GGG | - | chr2_3:41372599-41372618 | None:intergenic | 50.0% | |
| GGGATAGTCTGTTGTGTGTG+GGG | - | chr2_3:41372600-41372619 | None:intergenic | 50.0% | |
| ! | GTGACTGTGTGTGCGTCTTT+TGG | - | chr2_3:41372621-41372640 | None:intergenic | 50.0% |
| GTGTCAAATATCGGCCATGG+CGG | + | chr2_3:41372668-41372687 | Msa0292330:intron | 50.0% | |
| CGATTACAGATGGCAGACCA+TGG | - | chr2_3:41372806-41372825 | None:intergenic | 50.0% | |
| ! | AGATTTTCGATGGGCCACTG+CGG | - | chr2_3:41372974-41372993 | None:intergenic | 50.0% |
| ! | GGGTTTGGGACAACAAATCC+AGG | - | chr2_3:41372999-41373018 | None:intergenic | 50.0% |
| CACGCTTCCATGAGCTGTAA+TGG | + | chr2_3:41373104-41373123 | Msa0292330:intron | 50.0% | |
| AGGATCGCCATTACAGCTCA+TGG | - | chr2_3:41373114-41373133 | None:intergenic | 50.0% | |
| GTATTCCTCCCCTTCTAGTG+TGG | - | chr2_3:41373158-41373177 | None:intergenic | 50.0% | |
| !! | GCAAGGGCAGCTTTAAACCT+TGG | + | chr2_3:41373808-41373827 | Msa0292330:CDS | 50.0% |
| !! | AGGGCAGCTTTAAACCTTGG+TGG | + | chr2_3:41373811-41373830 | Msa0292330:CDS | 50.0% |
| ! | AACCTTGGTGGTACTGTGCT+TGG | + | chr2_3:41373823-41373842 | Msa0292330:CDS | 50.0% |
| ATCCAAGCACAGTACCACCA+AGG | - | chr2_3:41373828-41373847 | None:intergenic | 50.0% | |
| GGGAGGAATGTAGGATTCAC+AGG | - | chr2_3:41373892-41373911 | None:intergenic | 50.0% | |
| TGAATCCTACATTCCTCCCC+AGG | + | chr2_3:41373893-41373912 | Msa0292330:CDS | 50.0% | |
| GAATCCTACATTCCTCCCCA+GGG | + | chr2_3:41373894-41373913 | Msa0292330:CDS | 50.0% | |
| TATGCAGTCGGATGATGAGC+GGG | + | chr2_3:41374055-41374074 | Msa0292330:intron | 50.0% | |
| CAAGCGCGTAACCTGTGAAA+TGG | - | chr2_3:41374538-41374557 | None:intergenic | 50.0% | |
| TTTCACAGGTTACGCGCTTG+AGG | + | chr2_3:41374538-41374557 | Msa0292330:intron | 50.0% | |
| ! | GTTACGCGCTTGAGGCTTTT+GGG | + | chr2_3:41374546-41374565 | Msa0292330:CDS | 50.0% |
| ! | TTACGCGCTTGAGGCTTTTG+GGG | + | chr2_3:41374547-41374566 | Msa0292330:CDS | 50.0% |
| CGCAAGACCTATGCATTTCG+AGG | + | chr2_3:41374775-41374794 | Msa0292330:intron | 50.0% | |
| CACTTTCTGCCTGCTCAAGA+AGG | - | chr2_3:41375342-41375361 | None:intergenic | 50.0% | |
| GGAACTCAGCCTATCAGGTT+TGG | + | chr2_3:41375397-41375416 | Msa0292330:intron | 50.0% | |
| GTCCTTCAAAGACTCCAGTG+AGG | + | chr2_3:41375520-41375539 | Msa0292330:CDS | 50.0% | |
| AAAGACTCCAGTGAGGCCAA+GGG | + | chr2_3:41375527-41375546 | Msa0292330:CDS | 50.0% | |
| CCTGTATCGCGTTAACCGAT+CGG | + | chr2_3:41375558-41375577 | Msa0292330:exon | 50.0% | |
| CTTTCTAGGTACCCCAGTCT+TGG | + | chr2_3:41375750-41375769 | Msa0292330:three_prime_UTR | 50.0% | |
| TGGCCCTTCCTTGTGTTGTG+TGG | - | chr2_3:41369730-41369749 | None:intergenic | 55.0% | |
| TCGTGGTCGCTGCATTGTGA+TGG | + | chr2_3:41370910-41370929 | Msa0292330:intron | 55.0% | |
| TTTGCACTGCCCTCTTGCAG+AGG | + | chr2_3:41371321-41371340 | Msa0292330:intron | 55.0% | |
| CGTTCAACCTTCTCCTCCCT+TGG | - | chr2_3:41371361-41371380 | None:intergenic | 55.0% | |
| TAGGCTTGACACCTTCTCCC+GGG | + | chr2_3:41372038-41372057 | Msa0292330:intron | 55.0% | |
| AGTCTGTTGTGTGTGGGGGA+GGG | - | chr2_3:41372595-41372614 | None:intergenic | 55.0% | |
| TAGTCTGTTGTGTGTGGGGG+AGG | - | chr2_3:41372596-41372615 | None:intergenic | 55.0% | |
| GGCCCATCGAAAATCTGACC+TGG | + | chr2_3:41372978-41372997 | Msa0292330:intron | 55.0% | |
| ! | CAGCTCATGGAAGCGTGAGA+TGG | - | chr2_3:41373101-41373120 | None:intergenic | 55.0% |
| CTCCCCTTCTAGTGTGGACT+TGG | - | chr2_3:41373152-41373171 | None:intergenic | 55.0% | |
| CAAGTCCACACTAGAAGGGG+AGG | + | chr2_3:41373150-41373169 | Msa0292330:intron | 55.0% | |
| !!! | GTGTGCGCCCACGTGTTTTT+TGG | - | chr2_3:41373719-41373738 | None:intergenic | 55.0% |
| TTCGAAGGAAGGACCCTCAC+TGG | - | chr2_3:41373856-41373875 | None:intergenic | 55.0% | |
| CATACCCTGGGGAGGAATGT+AGG | - | chr2_3:41373901-41373920 | None:intergenic | 55.0% | |
| ! | GGTTACGCGCTTGAGGCTTT+TGG | + | chr2_3:41374545-41374564 | Msa0292330:intron | 55.0% |
| ! | TACGCGCTTGAGGCTTTTGG+GGG | + | chr2_3:41374548-41374567 | Msa0292330:CDS | 55.0% |
| AGGCACACTTTCGTTCCCAG+TGG | + | chr2_3:41374795-41374814 | Msa0292330:intron | 55.0% | |
| GGCCTCACTGGAGTCTTTGA+AGG | - | chr2_3:41375525-41375544 | None:intergenic | 55.0% | |
| CAAAGACTCCAGTGAGGCCA+AGG | + | chr2_3:41375526-41375545 | Msa0292330:CDS | 55.0% | |
| GATACAGGACGAGCAACCCT+TGG | - | chr2_3:41375546-41375565 | None:intergenic | 55.0% | |
| CCGATCGGTTAACGCGATAC+AGG | - | chr2_3:41375561-41375580 | None:intergenic | 55.0% | |
| CCTTCTCCCGGGTTCGAATC+CGG | + | chr2_3:41372049-41372068 | Msa0292330:intron | 60.0% | |
| CTTCTCCCGGGTTCGAATCC+GGG | + | chr2_3:41372050-41372069 | Msa0292330:intron | 60.0% | |
| CACACACAACTGCGAGGTCC+CGG | - | chr2_3:41372071-41372090 | None:intergenic | 60.0% | |
| TCCTCCATCGCATTCCGCCA+TGG | - | chr2_3:41372685-41372704 | None:intergenic | 60.0% | |
| !! | CTTGAGGCTTTTGGGGGACC+AGG | + | chr2_3:41374554-41374573 | Msa0292330:CDS | 60.0% |
| CCGGATTCGAACCCGGGAGA+AGG | - | chr2_3:41372052-41372071 | None:intergenic | 65.0% | |
| GAGGTCCCGGATTCGAACCC+GGG | - | chr2_3:41372058-41372077 | None:intergenic | 65.0% | |
| CGAGGTCCCGGATTCGAACC+CGG | - | chr2_3:41372059-41372078 | None:intergenic | 65.0% | |
| ! | TCGGCCATGGCGGAATGCGA+TGG | + | chr2_3:41372678-41372697 | Msa0292330:intron | 65.0% |
| ! | GCCATGGCGGAATGCGATGG+AGG | + | chr2_3:41372681-41372700 | Msa0292330:intron | 65.0% |
| CGAGCAACCCTTGGCCTCAC+TGG | - | chr2_3:41375537-41375556 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 41369720 | 41375874 | 41369720 | ID=Msa0292330;Name=Msa0292330 |
| chr2_3 | mRNA | 41369720 | 41375874 | 41369720 | ID=Msa0292330-mRNA-1;Parent=Msa0292330;Name=Msa0292330-mRNA-1;_AED=0.06;_eAED=0.06;_QI=434|1|1|1|1|1|10|302|298 |
| chr2_3 | exon | 41369720 | 41370411 | 41369720 | ID=Msa0292330-mRNA-1:exon:13315;Parent=Msa0292330-mRNA-1 |
| chr2_3 | exon | 41371341 | 41371451 | 41371341 | ID=Msa0292330-mRNA-1:exon:13316;Parent=Msa0292330-mRNA-1 |
| chr2_3 | exon | 41371565 | 41371609 | 41371565 | ID=Msa0292330-mRNA-1:exon:13317;Parent=Msa0292330-mRNA-1 |
| chr2_3 | exon | 41373596 | 41373668 | 41373596 | ID=Msa0292330-mRNA-1:exon:13318;Parent=Msa0292330-mRNA-1 |
| chr2_3 | exon | 41373803 | 41373915 | 41373803 | ID=Msa0292330-mRNA-1:exon:13319;Parent=Msa0292330-mRNA-1 |
| chr2_3 | exon | 41374062 | 41374121 | 41374062 | ID=Msa0292330-mRNA-1:exon:13320;Parent=Msa0292330-mRNA-1 |
| chr2_3 | exon | 41374402 | 41374449 | 41374402 | ID=Msa0292330-mRNA-1:exon:13321;Parent=Msa0292330-mRNA-1 |
| chr2_3 | exon | 41374546 | 41374614 | 41374546 | ID=Msa0292330-mRNA-1:exon:13322;Parent=Msa0292330-mRNA-1 |
| chr2_3 | exon | 41375352 | 41375413 | 41375352 | ID=Msa0292330-mRNA-1:exon:13323;Parent=Msa0292330-mRNA-1 |
| chr2_3 | exon | 41375515 | 41375874 | 41375515 | ID=Msa0292330-mRNA-1:exon:13324;Parent=Msa0292330-mRNA-1 |
| chr2_3 | five_prime_UTR | 41369720 | 41370153 | 41369720 | ID=Msa0292330-mRNA-1:five_prime_utr;Parent=Msa0292330-mRNA-1 |
| chr2_3 | CDS | 41370154 | 41370411 | 41370154 | ID=Msa0292330-mRNA-1:cds;Parent=Msa0292330-mRNA-1 |
| chr2_3 | CDS | 41371341 | 41371451 | 41371341 | ID=Msa0292330-mRNA-1:cds;Parent=Msa0292330-mRNA-1 |
| chr2_3 | CDS | 41371565 | 41371609 | 41371565 | ID=Msa0292330-mRNA-1:cds;Parent=Msa0292330-mRNA-1 |
| chr2_3 | CDS | 41373596 | 41373668 | 41373596 | ID=Msa0292330-mRNA-1:cds;Parent=Msa0292330-mRNA-1 |
| chr2_3 | CDS | 41373803 | 41373915 | 41373803 | ID=Msa0292330-mRNA-1:cds;Parent=Msa0292330-mRNA-1 |
| chr2_3 | CDS | 41374062 | 41374121 | 41374062 | ID=Msa0292330-mRNA-1:cds;Parent=Msa0292330-mRNA-1 |
| chr2_3 | CDS | 41374402 | 41374449 | 41374402 | ID=Msa0292330-mRNA-1:cds;Parent=Msa0292330-mRNA-1 |
| chr2_3 | CDS | 41374546 | 41374614 | 41374546 | ID=Msa0292330-mRNA-1:cds;Parent=Msa0292330-mRNA-1 |
| chr2_3 | CDS | 41375352 | 41375413 | 41375352 | ID=Msa0292330-mRNA-1:cds;Parent=Msa0292330-mRNA-1 |
| chr2_3 | CDS | 41375515 | 41375572 | 41375515 | ID=Msa0292330-mRNA-1:cds;Parent=Msa0292330-mRNA-1 |
| chr2_3 | three_prime_UTR | 41375573 | 41375874 | 41375573 | ID=Msa0292330-mRNA-1:three_prime_utr;Parent=Msa0292330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
