AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0749740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0749740 MtrunA17_Chr5g0396381 78.158 760 73 8 1 742 1 685 0.0 1144
Msa0749740 MtrunA17_Chr3g0090551 35.132 760 364 28 1 732 1 659 1.29e-87 290
Msa0749740 MtrunA17_Chr4g0020571 45.033 302 146 7 445 737 342 632 8.62e-63 222
Msa0749740 MtrunA17_Chr4g0020571 43.933 239 103 12 158 387 128 344 7.37e-36 144
Msa0749740 MtrunA17_Chr5g0445571 28.276 435 212 13 178 581 111 476 1.28e-30 127
Msa0749740 MtrunA17_Chr3g0101151 49.242 132 54 4 450 581 335 453 1.11e-25 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0749740 AT5G12440.4 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0749740 AT5G12440.11 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0749740 AT5G12440.12 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0749740 AT5G12440.7 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0749740 AT5G12440.1 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0749740 AT5G12440.9 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0749740 AT5G12440.2 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0749740 AT5G12440.3 38.556 734 314 32 1 709 32 653 1.82e-111 353
Msa0749740 AT5G12440.10 38.556 734 314 32 1 709 32 653 1.82e-111 353
Msa0749740 AT5G12440.8 38.556 734 314 32 1 709 32 653 1.82e-111 353
Msa0749740 AT5G12440.5 38.556 734 314 32 1 709 32 653 1.82e-111 353
Msa0749740 AT5G12440.6 38.556 734 314 32 1 709 32 653 1.82e-111 353
Msa0749740 AT3G21100.2 41.071 392 161 18 7 387 7 339 1.28e-57 207
Msa0749740 AT3G21100.2 47.909 263 102 9 446 701 338 572 2.02e-55 201
Msa0749740 AT3G21100.1 41.071 392 161 18 7 387 7 339 1.28e-57 207
Msa0749740 AT3G21100.1 47.909 263 102 9 446 701 338 572 2.02e-55 201
Msa0749740 AT3G21100.4 41.582 392 159 19 7 387 7 339 1.50e-57 206
Msa0749740 AT3G21100.4 47.348 264 103 9 446 701 338 573 1.16e-54 198
Msa0749740 AT3G21100.3 41.582 392 159 19 7 387 7 339 1.50e-57 206
Msa0749740 AT3G21100.3 47.348 264 103 9 446 701 338 573 1.16e-54 198
Msa0749740 AT1G51520.2 30.791 708 266 29 7 707 7 497 1.32e-56 202
Msa0749740 AT1G51520.1 32.753 574 215 24 7 575 7 414 2.47e-54 193
Msa0749740 AT3G51950.1 39.796 294 111 9 446 730 278 514 7.33e-42 160
Msa0749740 AT3G51950.1 42.778 180 75 9 210 387 126 279 2.33e-23 105
Msa0749740 AT3G51950.1 41.489 94 49 3 1 92 1 90 1.86e-11 67.8
Msa0749740 AT3G51950.3 39.796 294 111 9 446 730 278 514 7.33e-42 160
Msa0749740 AT3G51950.3 42.778 180 75 9 210 387 126 279 2.33e-23 105
Msa0749740 AT3G51950.3 41.489 94 49 3 1 92 1 90 1.86e-11 67.8
Msa0749740 AT3G51950.2 39.796 294 111 9 446 730 278 514 7.33e-42 160
Msa0749740 AT3G51950.2 42.778 180 75 9 210 387 126 279 2.33e-23 105
Msa0749740 AT3G51950.2 41.489 94 49 3 1 92 1 90 1.86e-11 67.8
Msa0749740 AT3G51950.4 39.796 294 111 9 446 730 278 514 7.33e-42 160
Msa0749740 AT3G51950.4 42.778 180 75 9 210 387 126 279 2.33e-23 105
Msa0749740 AT3G51950.4 41.489 94 49 3 1 92 1 90 1.86e-11 67.8
Msa0749740 AT3G63450.6 49.367 158 51 3 446 603 67 195 3.02e-35 136
Msa0749740 AT3G63450.7 49.367 158 53 3 446 603 175 305 1.86e-34 135
Msa0749740 AT3G63450.2 49.367 158 51 3 446 603 175 303 3.33e-34 135
Msa0749740 AT3G63450.1 49.367 158 51 3 446 603 175 303 3.33e-34 135
Msa0749740 AT3G63450.3 49.367 158 53 3 446 603 175 305 3.39e-34 135
Msa0749740 AT3G63450.4 49.367 158 53 3 446 603 175 305 3.39e-34 135
Msa0749740 AT3G63450.5 49.367 158 53 3 446 603 175 305 3.39e-34 135
Msa0749740 AT2G05160.2 67.797 59 19 0 446 504 337 395 4.58e-19 92.0
Msa0749740 AT2G05160.1 67.797 59 19 0 446 504 337 395 4.58e-19 92.0
Msa0749740 AT2G05160.3 67.797 59 19 0 446 504 337 395 6.46e-19 91.3

Find 226 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTTTCTTGCTATGGTTTC+TGG 0.060082 5_2:-3247423 Msa0749740:CDS
GACTCTTCAGCCTCCTTTCT+TGG 0.133175 5_2:+3245289 None:intergenic
GTTTGTCACCTTTGTCTTTC+CGG 0.179944 5_2:-3245833 Msa0749740:CDS
CTCACTTCTGCTGGTTCTTT+AGG 0.186781 5_2:-3245026 Msa0749740:CDS
GGATTAAACTTTGGACTAAT+AGG 0.200781 5_2:+3248225 None:intergenic
CTATGATGAATAACATAAAA+TGG 0.205709 5_2:+3244106 None:intergenic
TTTGGACTAATAGGGTTCTT+TGG 0.231605 5_2:+3248234 None:intergenic
TCTTCATAACCTTGCTATTA+GGG 0.243813 5_2:-3248451 Msa0749740:CDS
GCAAGAAACTCATTCCTTTC+GGG 0.247828 5_2:+3247435 None:intergenic
CCTTCACCTCTTAACCCTAT+TGG 0.270082 5_2:-3248387 Msa0749740:CDS
TTCTTCATAACCTTGCTATT+AGG 0.270313 5_2:-3248452 Msa0749740:CDS
GCCTCCTTTCTTGGAGTTCA+AGG 0.288088 5_2:+3245298 None:intergenic
GGTTGATCCGCGTCTTGAAA+TGG 0.288113 5_2:-3248037 Msa0749740:CDS
GAAGAATATTTCAACATTAC+TGG 0.303045 5_2:-3247468 Msa0749740:CDS
ATATTCTCATAAGACATTAA+AGG 0.311072 5_2:+3248204 None:intergenic
TATCTTATTGAGAAGGAAAA+TGG 0.311434 5_2:-3245349 Msa0749740:CDS
TCTCTCTGTTGGTGCTCCTT+TGG 0.323983 5_2:-3245217 Msa0749740:CDS
ATCGGATTATTCTTGAAATC+TGG 0.325085 5_2:+3245258 None:intergenic
AGACAAAAGCAAAAGAAAAT+AGG 0.326156 5_2:+3244009 None:intergenic
TCTGCAAATGATGCTAGTTT+TGG 0.328687 5_2:-3247946 Msa0749740:CDS
GCTGTTGGTGGCAGTGGTGC+TGG 0.330637 5_2:-3248174 Msa0749740:CDS
CATCACCTTCTGGTAATGTT+TGG 0.334098 5_2:-3248272 Msa0749740:CDS
AGCAAGAAACTCATTCCTTT+CGG 0.335824 5_2:+3247434 None:intergenic
TACCAGCAAAAGCGCATGTT+TGG 0.336745 5_2:-3245856 Msa0749740:CDS
TGCTGAGAGTGGGAATTTAA+AGG 0.339269 5_2:-3244934 Msa0749740:CDS
GATTAAACTTTGGACTAATA+GGG 0.340959 5_2:+3248226 None:intergenic
AAGATGTTTCGGAGTACTTC+AGG 0.343875 5_2:-3247332 Msa0749740:intron
GTCGTCTAACGGCGATGATT+TGG 0.347901 5_2:-3248058 Msa0749740:CDS
TTACCAGTAGCCGTAGGTTT+TGG 0.348499 5_2:+3248731 None:intergenic
AGTTTCTTGCTATGGTTTCT+GGG 0.349367 5_2:-3247422 Msa0749740:CDS
TTTAAGTTCTTTACAATTCA+AGG 0.357372 5_2:-3244610 Msa0749740:intron
GATGAAGTGATTCTTCCAAT+AGG 0.362935 5_2:+3248372 None:intergenic
CACGTGAGTCACATATGAAA+TGG 0.366446 5_2:+3245776 None:intergenic
AAATCTCCTTGGATGTTATC+AGG 0.366797 5_2:+3245147 None:intergenic
GATGAAAGTGGATTGGGATT+TGG 0.371765 5_2:-3247919 Msa0749740:CDS
TTCACCCAAGTTTGAGGGAT+TGG 0.382468 5_2:-3247791 Msa0749740:CDS
ATTCAAAGATGAAGATGTTT+CGG 0.383022 5_2:-3247343 Msa0749740:CDS
AATAATTTGTTGTCTCAGAT+TGG 0.396338 5_2:+3244071 None:intergenic
ACCATGAACAAACTTACAAT+TGG 0.396580 5_2:+3247849 None:intergenic
CTCTCTGACGCTTCAAAGAT+AGG 0.396969 5_2:-3248840 Msa0749740:five_prime_UTR
GACATTAAAGGATTAAACTT+TGG 0.397652 5_2:+3248216 None:intergenic
AAATCTTCTCCTAGAGGAAC+TGG 0.399520 5_2:-3248330 Msa0749740:CDS
TATTAGGGTAAAGACCCATT+TGG 0.399912 5_2:-3248436 Msa0749740:CDS
GAACAAGTTCATATTCTTCA+AGG 0.400230 5_2:+3248499 None:intergenic
CGCTTTAAAGAGAATATTTG+CGG 0.404246 5_2:-3247158 Msa0749740:CDS
TGAATCGACAACATCTGCTT+CGG 0.405313 5_2:-3244651 Msa0749740:CDS
AGGAACCCTTCATCACCTTC+TGG 0.405702 5_2:-3248282 Msa0749740:CDS
TCCAATTGTAAGTTTGTTCA+TGG 0.406070 5_2:-3247850 Msa0749740:CDS
GTTGATCCGCGTCTTGAAAT+GGG 0.407371 5_2:-3248036 Msa0749740:CDS
TGGGCGTTGGTGGTCAGAAT+TGG 0.414377 5_2:-3248017 Msa0749740:CDS
TTAAGAGGTGAAGGTGAAGA+AGG 0.415332 5_2:+3248396 None:intergenic
ATTAGGGTAAAGACCCATTT+GGG 0.415903 5_2:-3248435 Msa0749740:CDS
GTACTCTCATTAGCCACTTC+CGG 0.418314 5_2:+3244704 None:intergenic
ATGCTTCTCTAGGATGATCT+AGG 0.420612 5_2:+3244272 None:intergenic
ATATTTCAACATTACTGGTC+GGG 0.426560 5_2:-3247463 Msa0749740:CDS
CGCAAATGCTGCCGCAGCCA+CGG 0.428719 5_2:+3247497 None:intergenic
TGAATTGTAAAGAACTTAAA+CGG 0.431400 5_2:+3244613 None:intergenic
GAATCGACAACATCTGCTTC+GGG 0.431778 5_2:-3244650 Msa0749740:CDS
ACAACCAATGTTCTTTCAGT+TGG 0.432665 5_2:+3246414 None:intergenic
GATTCGATTGATGCAAATTC+CGG 0.432753 5_2:-3247826 Msa0749740:CDS
TTGTTCCAATCCCTCAAACT+TGG 0.434886 5_2:+3247786 None:intergenic
ACGTGAGTCACATATGAAAT+GGG 0.436440 5_2:+3245777 None:intergenic
GAGTAAAGGGTATCAAGAAA+TGG 0.437128 5_2:+3248684 None:intergenic
CAAGGTGCTGTTGGTGGCAG+TGG 0.437766 5_2:-3248180 Msa0749740:CDS
ATGAAGTGATTCTTCCAATA+GGG 0.438078 5_2:+3248373 None:intergenic
CAAATTGCTGCTGCTGATGT+TGG 0.441947 5_2:+3245622 None:intergenic
TGTTGGTTCACCCAAGTTTG+AGG 0.444572 5_2:-3247797 Msa0749740:CDS
GGTGTTGATGAAAGTGGATT+GGG 0.445623 5_2:-3247925 Msa0749740:CDS
AGCATCAGACCAGGGAGCAC+AGG 0.445794 5_2:+3247090 None:intergenic
ATTCTTCCAATAGGGTTAAG+AGG 0.447622 5_2:+3248381 None:intergenic
ACCAGCAAAAGCGCATGTTT+GGG 0.448689 5_2:-3245855 Msa0749740:CDS
GTTGGTTCACCCAAGTTTGA+GGG 0.449991 5_2:-3247796 Msa0749740:CDS
AAGAGGCAAGCAAGGGGAGG+GGG 0.450881 5_2:-3244487 Msa0749740:three_prime_UTR
AATGCTTGAAAGAGAGTAAA+GGG 0.455379 5_2:+3248671 None:intergenic
TCTTTGAATGTGCTTTCAGC+AGG 0.457800 5_2:+3247357 None:intergenic
TGGTGTTGATGAAAGTGGAT+TGG 0.458084 5_2:-3247926 Msa0749740:CDS
GGTAAGGAATTCTCACATCT+TGG 0.459599 5_2:+3245875 None:intergenic
GCTGCATCACAACTTGCTGC+TGG 0.462022 5_2:-3247712 Msa0749740:CDS
TAGATAGGTTCATACCCAAA+TGG 0.462403 5_2:+3248421 None:intergenic
CGTCTTGAAATGGGCGTTGG+TGG 0.465802 5_2:-3248027 Msa0749740:CDS
TATGATGAATAACATAAAAT+GGG 0.467432 5_2:+3244107 None:intergenic
TAAGAGGTGAAGGTGAAGAA+GGG 0.469413 5_2:+3248397 None:intergenic
TGATTTCTCTCCACCGGAAG+TGG 0.471635 5_2:-3244717 Msa0749740:CDS
AATAGGGTTCTTTGGAAAAG+AGG 0.473814 5_2:+3248242 None:intergenic
ATCTGCCGCGAAGCCGAGTT+AGG 0.473872 5_2:+3247393 None:intergenic
CACAGGCAAAACCACTTTCA+TGG 0.474335 5_2:+3247107 None:intergenic
AAGGAATGAGTTTCTTGCTA+TGG 0.474746 5_2:-3247430 Msa0749740:CDS
GCTACTGCTGCTGCTGAGAG+TGG 0.476207 5_2:-3244945 Msa0749740:CDS
AAGGTGAAGAAGGGGTAGAT+AGG 0.478323 5_2:+3248406 None:intergenic
CACTGGGCACACCATGAAAG+TGG 0.478966 5_2:-3247118 Msa0749740:CDS
AGTGGCAGCCTCACTTCTGC+TGG 0.479574 5_2:-3245035 Msa0749740:CDS
TTTAGCATGTTGTCCTGACC+AGG 0.479663 5_2:-3248475 Msa0749740:CDS
AGGTTATGAAGAACCTGGTC+AGG 0.480573 5_2:+3248462 None:intergenic
CCACCAAAACCTACGGCTAC+TGG 0.483036 5_2:-3248734 Msa0749740:five_prime_UTR
GAGAAGGAAAATGGAGGAGC+AGG 0.484754 5_2:-3245340 Msa0749740:CDS
CTAGAGAAGCATCAAAACTA+AGG 0.485524 5_2:-3244261 Msa0749740:three_prime_UTR
CTGCGCTGGTGGTGGTGAAT+CGG 0.486467 5_2:+3245240 None:intergenic
GGTGAAGCAAAGAGACTGTC+AGG 0.486964 5_2:+3244767 None:intergenic
AAGATGTCAACTTACTTGTC+AGG 0.488252 5_2:+3245718 None:intergenic
TCCGTCTGATTTCTCTCCAC+CGG 0.488582 5_2:-3244723 Msa0749740:CDS
AGGTGCTGCATCTGAGCAGC+AGG 0.492634 5_2:-3245006 Msa0749740:CDS
AGAAAATAGGTACATAATGA+TGG 0.493862 5_2:+3244022 None:intergenic
ATGTACTTGTCGTACGATAC+CGG 0.495797 5_2:+3247679 None:intergenic
ACAAGAGGCAAGCAAGGGGA+GGG 0.496163 5_2:-3244489 Msa0749740:three_prime_UTR
GCAAATTCCGGTGCTGTTGT+TGG 0.496350 5_2:-3247814 Msa0749740:CDS
GAGAAATTTGATTACCAGGA+TGG 0.500480 5_2:+3245535 None:intergenic
TTACCAGGATGGAAATCAAA+AGG 0.503183 5_2:+3245546 None:intergenic
GCTTCACCAACAAAAGCAGC+TGG 0.504326 5_2:-3244752 Msa0749740:CDS
CAAGAGGCAAGCAAGGGGAG+GGG 0.506271 5_2:-3244488 Msa0749740:three_prime_UTR
ACTAACCTGTAAAATCTCCT+TGG 0.506306 5_2:+3245136 None:intergenic
AGATAGGTTCATACCCAAAT+GGG 0.506648 5_2:+3248422 None:intergenic
CATGTCTTTACTTTGCTAGA+GGG 0.506660 5_2:-3247888 Msa0749740:CDS
AATATGACTCTCACTGTCTC+CGG 0.508178 5_2:+3245814 None:intergenic
TCAACATTACTGGTCGGGGC+AGG 0.511014 5_2:-3247458 Msa0749740:CDS
ATAGGGTTCTTTGGAAAAGA+GGG 0.511296 5_2:+3248243 None:intergenic
GGTGGTCAGAATTGGATCTC+TGG 0.511430 5_2:-3248009 Msa0749740:CDS
CTACTGCTGCTGCTGAGAGT+GGG 0.512956 5_2:-3244944 Msa0749740:CDS
TTGTGTGAAATTGCGCGGAT+AGG 0.513544 5_2:-3243964 Msa0749740:three_prime_UTR
TAATCACCATTATTAACCCT+TGG 0.513837 5_2:+3248132 None:intergenic
TGTTCCAATCCCTCAAACTT+GGG 0.514806 5_2:+3247787 None:intergenic
ACATTACCAGAAGGTGATGA+AGG 0.516499 5_2:+3248276 None:intergenic
GAATGTGCTTTCAGCAGGAA+AGG 0.517326 5_2:+3247362 None:intergenic
TGAAGAGTTCATGAGGTTCA+AGG 0.521920 5_2:-3247761 Msa0749740:CDS
TTTCTCAATGAGTCGTCTAA+CGG 0.522774 5_2:-3248069 Msa0749740:CDS
TAACATGGCTATGAAGTTGA+TGG 0.523547 5_2:+3245187 None:intergenic
TTATCTAATTCTTTGTAGTG+TGG 0.525418 5_2:-3248878 Msa0749740:five_prime_UTR
CCATGTCTTTACTTTGCTAG+AGG 0.529183 5_2:-3247889 Msa0749740:CDS
TGCTGCTGGTGGAACATCAC+CGG 0.530369 5_2:-3247698 Msa0749740:CDS
AGAGGAACTGGACTTAGTAA+TGG 0.530744 5_2:-3248318 Msa0749740:CDS
AAGAGGTGAAGGTGAAGAAG+GGG 0.530887 5_2:+3248398 None:intergenic
TGCAATATGTATTGCTTGGT+CGG 0.533943 5_2:+3244195 None:intergenic
CTGGTCGGGGCAGGCCCGAA+AGG 0.534386 5_2:-3247449 Msa0749740:CDS
AACATGGCTATGAAGTTGAT+GGG 0.534397 5_2:+3245188 None:intergenic
CTTCTCAATAAGATATCATG+TGG 0.536105 5_2:+3245357 None:intergenic
TTACTAAGTCCAGTTCCTCT+AGG 0.536989 5_2:+3248321 None:intergenic
AAAACCTACGGCTACTGGTA+AGG 0.538757 5_2:-3248729 Msa0749740:five_prime_UTR
ATGCTCATAATATTCATAAG+AGG 0.539122 5_2:-3247975 Msa0749740:CDS
GGCTGCGGCAGCATTTGCGA+TGG 0.539812 5_2:-3247493 Msa0749740:CDS
AAGGATGTTGCAAAGTCTGA+AGG 0.540390 5_2:-3244915 Msa0749740:CDS
TATTTCAACATTACTGGTCG+GGG 0.542341 5_2:-3247462 Msa0749740:CDS
ATTTCCAACTGAAAGAACAT+TGG 0.542751 5_2:-3246418 Msa0749740:CDS
GCATCACAACTTGCTGCTGG+TGG 0.543311 5_2:-3247709 Msa0749740:CDS
CATAGCCATGTTAACCATGC+AGG 0.544634 5_2:-3245177 Msa0749740:CDS
TTCTGGGGACAAGCCTAACT+CGG 0.544864 5_2:-3247406 Msa0749740:CDS
TGATTGATGATTGATGATGA+TGG 0.545525 5_2:+3244235 None:intergenic
AAATGCTTGAAAGAGAGTAA+AGG 0.549806 5_2:+3248670 None:intergenic
CACCAGCGCAGTCTCTCTGT+TGG 0.552012 5_2:-3245228 Msa0749740:CDS
AGCAATACATATTGCATACA+TGG 0.552154 5_2:-3244188 Msa0749740:three_prime_UTR
ACATTTCAGAGCCGTGGCTG+CGG 0.553398 5_2:-3247508 Msa0749740:intron
ATCTGCTTCGGGTGACAACA+TGG 0.554785 5_2:-3244639 Msa0749740:CDS
TTGTTGACTCTACAGAAATG+TGG 0.554888 5_2:-3244801 Msa0749740:intron
TGCTCAGCAGCATCAAAGAA+TGG 0.555393 5_2:-3247737 Msa0749740:CDS
AAGTCCTTGAACTCCAAGAA+AGG 0.556107 5_2:-3245302 Msa0749740:CDS
GAAGGCGTAGATCTCGGCAT+GGG 0.556601 5_2:-3244897 Msa0749740:CDS
AAGTCTGAAGGCGTAGATCT+CGG 0.557200 5_2:-3244903 Msa0749740:CDS
CACATGATATCTTATTGAGA+AGG 0.557830 5_2:-3245356 Msa0749740:CDS
CACTGCCACCAACAGCACCT+TGG 0.559329 5_2:+3248181 None:intergenic
AATATTTCAACATTACTGGT+CGG 0.562602 5_2:-3247464 Msa0749740:CDS
TACAAGAGGCAAGCAAGGGG+AGG 0.562749 5_2:-3244490 Msa0749740:three_prime_UTR
ATAACATAAAATGGGAAAGG+AGG 0.563680 5_2:+3244115 None:intergenic
AAAGACCTGCATGGTTAACA+TGG 0.565559 5_2:+3245172 None:intergenic
GGAATTCTCACATCTTGGAC+AGG 0.567021 5_2:+3245880 None:intergenic
GTTTCTTGCTATGGTTTCTG+GGG 0.567026 5_2:-3247421 Msa0749740:CDS
TATGTTACATTTCAGAGCCG+TGG 0.567197 5_2:-3247514 Msa0749740:intron
CAACAGAGAGACTGCGCTGG+TGG 0.569130 5_2:+3245229 None:intergenic
CCAATAGGGTTAAGAGGTGA+AGG 0.570288 5_2:+3248387 None:intergenic
GACTTTAGCAAGAACCACAT+TGG 0.572181 5_2:+3248575 None:intergenic
TACATATTGCATACATGGAT+AGG 0.572521 5_2:-3244183 Msa0749740:three_prime_UTR
TGAATAACATAAAATGGGAA+AGG 0.574733 5_2:+3244112 None:intergenic
CAAATATTCTCTTTAAAGCG+TGG 0.575174 5_2:+3247161 None:intergenic
GAGAATATCCAAGGTGCTGT+TGG 0.575381 5_2:-3248189 Msa0749740:CDS
TTAGACGACTCATTGAGAAA+AGG 0.576395 5_2:+3248072 None:intergenic
AAAATACAAGAGGCAAGCAA+GGG 0.581659 5_2:-3244494 Msa0749740:three_prime_UTR
CACTGTCTCCGGAAAGACAA+AGG 0.581924 5_2:+3245825 None:intergenic
TGTGAAACCCTACAAGGAGA+AGG 0.583303 5_2:-3245749 Msa0749740:CDS
TCCTTGAACTCCAAGAAAGG+AGG 0.583568 5_2:-3245299 Msa0749740:CDS
CCGCGTCTTGAAATGGGCGT+TGG 0.584382 5_2:-3248030 Msa0749740:CDS
ATGTCTTATGAGAATATCCA+AGG 0.586654 5_2:-3248198 Msa0749740:CDS
CTTTCCATTGCAGGCTACAG+TGG 0.586758 5_2:-3245053 Msa0749740:intron
CTTTCTCCTGATAACATCCA+AGG 0.587933 5_2:-3245153 Msa0749740:CDS
CAGAGAGACTGCGCTGGTGG+TGG 0.594991 5_2:+3245232 None:intergenic
GTTGGTGGCAGTGGTGCTGG+TGG 0.595287 5_2:-3248171 Msa0749740:CDS
ACAAGCCTAACTCGGCTTCG+CGG 0.597420 5_2:-3247398 Msa0749740:CDS
GCTGCGGCAGCATTTGCGAT+GGG 0.597928 5_2:-3247492 Msa0749740:CDS
AAGCAAAGAGACTGTCAGGA+AGG 0.599815 5_2:+3244771 None:intergenic
TCTTTAGAGTCAAACGCAGA+GGG 0.601397 5_2:+3245570 None:intergenic
TAGCAAGGTTATGAAGAACC+TGG 0.603647 5_2:+3248457 None:intergenic
GTGAGAGTCATATTATCGAA+AGG 0.603657 5_2:-3245805 Msa0749740:CDS
GGGTCTTTACCCTAATAGCA+AGG 0.608257 5_2:+3248442 None:intergenic
GGGTGAACCAACAACAGCAC+CGG 0.609002 5_2:+3247807 None:intergenic
TCAGCAGCAGCAATTTGAGA+GGG 0.609147 5_2:-3245616 Msa0749740:CDS
CCTCTAGCAAAGTAAAGACA+TGG 0.612058 5_2:+3247889 None:intergenic
GTGAAACCCTACAAGGAGAA+GGG 0.615151 5_2:-3245748 Msa0749740:CDS
CATTACCAGAAGGTGATGAA+GGG 0.615959 5_2:+3248277 None:intergenic
AGCAGCACAGTGATAATCAA+AGG 0.615972 5_2:-3247642 Msa0749740:intron
TGTATGCAATATGTATTGCT+TGG 0.617673 5_2:+3244191 None:intergenic
CTCTCATTAGCCACTTCCGG+TGG 0.619392 5_2:+3244707 None:intergenic
AGCAAAGAGACTGTCAGGAA+GGG 0.620621 5_2:+3244772 None:intergenic
AATTGGATCTCTGGTAACAA+TGG 0.622958 5_2:-3248000 Msa0749740:CDS
AGATCTTGTGTGAAATTGCG+CGG 0.623399 5_2:-3243969 Msa0749740:three_prime_UTR
ATCAGCAGCAGCAATTTGAG+AGG 0.624147 5_2:-3245617 Msa0749740:CDS
TGTGCTTGTGAAACCCTACA+AGG 0.627297 5_2:-3245755 Msa0749740:CDS
TGTATAGCCACCAAAACCTA+CGG 0.627885 5_2:-3248741 Msa0749740:five_prime_UTR
TCCGGTGGAGAGAAATCAGA+CGG 0.628112 5_2:+3244722 None:intergenic
GTAGCAGCATCAATGCAAGA+TGG 0.631513 5_2:+3244963 None:intergenic
CACCAACAGAGAGACTGCGC+TGG 0.632218 5_2:+3245226 None:intergenic
CTAAAGAACCAGCAGAAGTG+AGG 0.639544 5_2:+3245027 None:intergenic
AACAACATGAAGAGTTCATG+AGG 0.641597 5_2:-3247768 Msa0749740:CDS
TTCTTTAGAGTCAAACGCAG+AGG 0.643087 5_2:+3245569 None:intergenic
AATATCCAAGGTGCTGTTGG+TGG 0.644306 5_2:-3248186 Msa0749740:CDS
TGAAGGCGTAGATCTCGGCA+TGG 0.644522 5_2:-3244898 Msa0749740:CDS
CTTATTGAGAAGGAAAATGG+AGG 0.653298 5_2:-3245346 Msa0749740:CDS
ACATGGCTATGAAGTTGATG+GGG 0.654909 5_2:+3245189 None:intergenic
TTCTTATGAAGCAACCAATG+TGG 0.670186 5_2:-3248589 Msa0749740:CDS
AAGGCGTAGATCTCGGCATG+GGG 0.671195 5_2:-3244896 Msa0749740:intron
TCAGCAGCATCAAAGAATGG+TGG 0.671588 5_2:-3247734 Msa0749740:CDS
AAGGGGAGAATCCAAATACA+CGG 0.675208 5_2:-3246448 Msa0749740:CDS
CGTGAGTCACATATGAAATG+GGG 0.678147 5_2:+3245778 None:intergenic
AAATACAAGAGGCAAGCAAG+GGG 0.680528 5_2:-3244493 Msa0749740:three_prime_UTR
AACGCAGAGGGACTTAAACA+TGG 0.682483 5_2:+3245582 None:intergenic
CCAACGCCCATTTCAAGACG+CGG 0.684511 5_2:+3248030 None:intergenic
CAGCAGCAGCAATTTGAGAG+GGG 0.685988 5_2:-3245615 Msa0749740:CDS
TATCAGGAGAAAGACCTGCA+TGG 0.700183 5_2:+3245163 None:intergenic
TGTGACCAAACATTACCAGA+AGG 0.700366 5_2:+3248267 None:intergenic
CATACCTTACCAGTAGCCGT+AGG 0.703434 5_2:+3248725 None:intergenic
GGTGTGCCCAGTGAAAATCG+TGG 0.781448 5_2:+3247128 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGTTTTAATATTATGTA+TGG - chr5_2:3245355-3245374 Msa0749740:CDS 10.0%
!!! TATTTATGTATTTATTTCTT+AGG - chr5_2:3248336-3248355 Msa0749740:CDS 10.0%
!! TTGTTAATGTTATTCTTATT+TGG - chr5_2:3246329-3246348 Msa0749740:intron 15.0%
!!! ATTACGATTTTATGAATAAT+AGG - chr5_2:3246652-3246671 Msa0749740:intron 15.0%
!! GATCGTATTTATATTTATAT+CGG - chr5_2:3248046-3248065 Msa0749740:CDS 15.0%
!! TATGATGAATAACATAAAAT+GGG + chr5_2:3248789-3248808 None:intergenic 15.0%
!!! AAGATTTGATTTTTCACTAA+TGG - chr5_2:3244280-3244299 Msa0749740:three_prime_UTR 20.0%
!!! AGATTTGATTTTTCACTAAT+GGG - chr5_2:3244281-3244300 Msa0749740:three_prime_UTR 20.0%
!! ATATTCTCATAAGACATTAA+AGG + chr5_2:3244692-3244711 None:intergenic 20.0%
!!! AAAGGTATATTTCTTATAGA+TGG - chr5_2:3245269-3245288 Msa0749740:CDS 20.0%
!! AAGGTATATTTCTTATAGAT+GGG - chr5_2:3245270-3245289 Msa0749740:CDS 20.0%
!! TTAAATTGCATAATGATGAA+GGG + chr5_2:3245959-3245978 None:intergenic 20.0%
!!! AAATGAATATTGATTTGTCA+AGG - chr5_2:3246426-3246445 Msa0749740:CDS 20.0%
!!! AATGAATATTGATTTGTCAA+GGG - chr5_2:3246427-3246446 Msa0749740:CDS 20.0%
!!! AATTTTTTGTACCTATCATT+AGG - chr5_2:3246811-3246830 Msa0749740:intron 20.0%
!!! TTGTTATTTTGAAGCAAATT+TGG - chr5_2:3246989-3247008 Msa0749740:intron 20.0%
!! TGAATTGTAAAGAACTTAAA+CGG + chr5_2:3248283-3248302 None:intergenic 20.0%
!!! TTTAAGTTCTTTACAATTCA+AGG - chr5_2:3248283-3248302 Msa0749740:CDS 20.0%
!! CTATGATGAATAACATAAAA+TGG + chr5_2:3248790-3248809 None:intergenic 20.0%
! TTATCTAATTCTTTGTAGTG+TGG - chr5_2:3244015-3244034 Msa0749740:three_prime_UTR 25.0%
!!! TGATTTTTGAAGCATTTTCA+GGG + chr5_2:3244355-3244374 None:intergenic 25.0%
!!! ATGATTTTTGAAGCATTTTC+AGG + chr5_2:3244356-3244375 None:intergenic 25.0%
! TGAAAATGCTTCAAAAATCA+TGG - chr5_2:3244355-3244374 Msa0749740:intron 25.0%
! GAAAATGCTTCAAAAATCAT+GGG - chr5_2:3244356-3244375 Msa0749740:intron 25.0%
!!! AGATTTTGAAAAAGGGTTAT+TGG + chr5_2:3244549-3244568 None:intergenic 25.0%
!!! TAGGAGAAGATTTTGAAAAA+GGG + chr5_2:3244556-3244575 None:intergenic 25.0%
! GATTAAACTTTGGACTAATA+GGG + chr5_2:3244670-3244689 None:intergenic 25.0%
! GACATTAAAGGATTAAACTT+TGG + chr5_2:3244680-3244699 None:intergenic 25.0%
! ATGCTCATAATATTCATAAG+AGG - chr5_2:3244918-3244937 Msa0749740:CDS 25.0%
! AAGTAAACAACAAACTAAAG+AGG + chr5_2:3245301-3245320 None:intergenic 25.0%
! GAAGAATATTTCAACATTAC+TGG - chr5_2:3245425-3245444 Msa0749740:intron 25.0%
! AATATTTCAACATTACTGGT+CGG - chr5_2:3245429-3245448 Msa0749740:intron 25.0%
! ATTCAAAGATGAAGATGTTT+CGG - chr5_2:3245550-3245569 Msa0749740:CDS 25.0%
! TATATCACCTTATCATAGAT+AGG - chr5_2:3245636-3245655 Msa0749740:intron 25.0%
! ATATTGCCATTAATTATTCC+AGG - chr5_2:3245707-3245726 Msa0749740:intron 25.0%
! AAAAGACACATTACTTAGTT+AGG + chr5_2:3245885-3245904 None:intergenic 25.0%
!! TTGAGTTTGCTTGATAATTA+AGG - chr5_2:3245921-3245940 Msa0749740:intron 25.0%
!! TGAGTTTGCTTGATAATTAA+GGG - chr5_2:3245922-3245941 Msa0749740:intron 25.0%
! CTTAAATTGCATAATGATGA+AGG + chr5_2:3245960-3245979 None:intergenic 25.0%
!! TGTAACGTTCTTTTTGTATT+AGG - chr5_2:3246048-3246067 Msa0749740:intron 25.0%
!!! ATGAATATTGATTTGTCAAG+GGG - chr5_2:3246428-3246447 Msa0749740:CDS 25.0%
!! AAATAGATTTTCCGTGTATT+TGG + chr5_2:3246459-3246478 None:intergenic 25.0%
! TACTTCATTTGTAACTAACA+TGG + chr5_2:3246540-3246559 None:intergenic 25.0%
!! CGATTTTATGAATAATAGGA+TGG - chr5_2:3246656-3246675 Msa0749740:intron 25.0%
!! TTTAAAATGTTACCTTCTGA+GGG + chr5_2:3246716-3246735 None:intergenic 25.0%
! TATTCCCGAATTGATATTAT+TGG - chr5_2:3247224-3247243 Msa0749740:intron 25.0%
! ATTCCCGAATTGATATTATT+GGG - chr5_2:3247225-3247244 Msa0749740:intron 25.0%
! TAGTCCCAATAATATCAATT+CGG + chr5_2:3247232-3247251 None:intergenic 25.0%
! AGAGGAAAAAGGAAAATTTA+TGG + chr5_2:3247440-3247459 None:intergenic 25.0%
! TATCTTATTGAGAAGGAAAA+TGG - chr5_2:3247544-3247563 Msa0749740:intron 25.0%
!!! CATCTAAGATTTTGAATTGT+AGG - chr5_2:3248371-3248390 Msa0749740:CDS 25.0%
! GTAGGTAATAAAAATACAAG+AGG - chr5_2:3248389-3248408 Msa0749740:CDS 25.0%
! AAGGATAAATGAGTGAAAAA+AGG + chr5_2:3248465-3248484 None:intergenic 25.0%
!!! ACATTTATTTTCACCTGTAA+AGG + chr5_2:3248484-3248503 None:intergenic 25.0%
! TGAATAACATAAAATGGGAA+AGG + chr5_2:3248784-3248803 None:intergenic 25.0%
!!! AATAATTTGTTGTCTCAGAT+TGG + chr5_2:3248825-3248844 None:intergenic 25.0%
! AGAAAATAGGTACATAATGA+TGG + chr5_2:3248874-3248893 None:intergenic 25.0%
! AGACAAAAGCAAAAGAAAAT+AGG + chr5_2:3248887-3248906 None:intergenic 25.0%
AATGCTTGAAAGAGAGTAAA+GGG + chr5_2:3244225-3244244 None:intergenic 30.0%
AAATGCTTGAAAGAGAGTAA+AGG + chr5_2:3244226-3244245 None:intergenic 30.0%
GAACAAGTTCATATTCTTCA+AGG + chr5_2:3244397-3244416 None:intergenic 30.0%
!! TTCTTCATAACCTTGCTATT+AGG - chr5_2:3244441-3244460 Msa0749740:intron 30.0%
!! TCTTCATAACCTTGCTATTA+GGG - chr5_2:3244442-3244461 Msa0749740:intron 30.0%
ATGAAGTGATTCTTCCAATA+GGG + chr5_2:3244523-3244542 None:intergenic 30.0%
!! CTAGGAGAAGATTTTGAAAA+AGG + chr5_2:3244557-3244576 None:intergenic 30.0%
! TTTTCAAAATCTTCTCCTAG+AGG - chr5_2:3244557-3244576 Msa0749740:intron 30.0%
!!! GTAATGGTTTTGACTTCAAT+AGG - chr5_2:3244591-3244610 Msa0749740:intron 30.0%
GGATTAAACTTTGGACTAAT+AGG + chr5_2:3244671-3244690 None:intergenic 30.0%
ATGTCTTATGAGAATATCCA+AGG - chr5_2:3244695-3244714 Msa0749740:CDS 30.0%
! TTTTCACCAAGGGTTAATAA+TGG - chr5_2:3244755-3244774 Msa0749740:CDS 30.0%
TAATCACCATTATTAACCCT+TGG + chr5_2:3244764-3244783 None:intergenic 30.0%
! TCCAATTGTAAGTTTGTTCA+TGG - chr5_2:3245043-3245062 Msa0749740:CDS 30.0%
ACCATGAACAAACTTACAAT+TGG + chr5_2:3245047-3245066 None:intergenic 30.0%
ATATTTCAACATTACTGGTC+GGG - chr5_2:3245430-3245449 Msa0749740:intron 30.0%
CGAATAACCTATCTATGATA+AGG + chr5_2:3245646-3245665 None:intergenic 30.0%
!! CAAATATTCTCTTTAAAGCG+TGG + chr5_2:3245735-3245754 None:intergenic 30.0%
!! CGCTTTAAAGAGAATATTTG+CGG - chr5_2:3245735-3245754 Msa0749740:CDS 30.0%
! TAATTTTCCACGATTTTCAC+TGG - chr5_2:3245758-3245777 Msa0749740:CDS 30.0%
! AATTTTCCACGATTTTCACT+GGG - chr5_2:3245759-3245778 Msa0749740:CDS 30.0%
AAACTCAAATCAATCAAGGA+TGG + chr5_2:3245909-3245928 None:intergenic 30.0%
AAGCAAACTCAAATCAATCA+AGG + chr5_2:3245913-3245932 None:intergenic 30.0%
! GATAATTAAGGGTTTTCAAC+TGG - chr5_2:3245933-3245952 Msa0749740:intron 30.0%
AATTTAAGCTCAGTAATCAC+TGG - chr5_2:3245972-3245991 Msa0749740:intron 30.0%
AGAACGTTACACATAAAACA+CGG + chr5_2:3246039-3246058 None:intergenic 30.0%
GACTTCTAAACTATGTTAAC+AGG + chr5_2:3246395-3246414 None:intergenic 30.0%
ATTTCCAACTGAAAGAACAT+TGG - chr5_2:3246475-3246494 Msa0749740:intron 30.0%
TGTGTTTATTTGTGAACCAT+AGG - chr5_2:3246682-3246701 Msa0749740:intron 30.0%
GTGTTTATTTGTGAACCATA+GGG - chr5_2:3246683-3246702 Msa0749740:intron 30.0%
!! CTTTAAAATGTTACCTTCTG+AGG + chr5_2:3246717-3246736 None:intergenic 30.0%
! CTCAGAAGGTAACATTTTAA+AGG - chr5_2:3246715-3246734 Msa0749740:intron 30.0%
ATAACTATTAAGCGTTCTTG+CGG - chr5_2:3246757-3246776 Msa0749740:intron 30.0%
TTGTTCATTTATGTGTCAGA+AGG + chr5_2:3246793-3246812 None:intergenic 30.0%
! TTTTGTACCTATCATTAGGT+AGG - chr5_2:3246815-3246834 Msa0749740:intron 30.0%
TTAGGTAGGTTCTTACTTAT+AGG - chr5_2:3246829-3246848 Msa0749740:intron 30.0%
TCTTATTGCATCTTTACAGA+AGG - chr5_2:3246942-3246961 Msa0749740:intron 30.0%
AGTCCCAATAATATCAATTC+GGG + chr5_2:3247231-3247250 None:intergenic 30.0%
CTTCTCAATAAGATATCATG+TGG + chr5_2:3247539-3247558 None:intergenic 30.0%
CACATGATATCTTATTGAGA+AGG - chr5_2:3247537-3247556 Msa0749740:intron 30.0%
ATCGGATTATTCTTGAAATC+TGG + chr5_2:3247638-3247657 None:intergenic 30.0%
! TCTTTACAATTCAAGGTACT+TGG - chr5_2:3248290-3248309 Msa0749740:CDS 30.0%
TTCACTCATTTATCCTTTAC+AGG - chr5_2:3248468-3248487 Msa0749740:CDS 30.0%
!! TGATTGATGATTGATGATGA+TGG + chr5_2:3248661-3248680 None:intergenic 30.0%
TGTATGCAATATGTATTGCT+TGG + chr5_2:3248705-3248724 None:intergenic 30.0%
AGCAATACATATTGCATACA+TGG - chr5_2:3248705-3248724 Msa0749740:five_prime_UTR 30.0%
TACATATTGCATACATGGAT+AGG - chr5_2:3248710-3248729 Msa0749740:five_prime_UTR 30.0%
ATAACATAAAATGGGAAAGG+AGG + chr5_2:3248781-3248800 None:intergenic 30.0%
!! GAGTAAAGGGTATCAAGAAA+TGG + chr5_2:3244212-3244231 None:intergenic 35.0%
TTCTTATGAAGCAACCAATG+TGG - chr5_2:3244304-3244323 Msa0749740:three_prime_UTR 35.0%
TATTAGGGTAAAGACCCATT+TGG - chr5_2:3244457-3244476 Msa0749740:intron 35.0%
ATTAGGGTAAAGACCCATTT+GGG - chr5_2:3244458-3244477 Msa0749740:intron 35.0%
AGATAGGTTCATACCCAAAT+GGG + chr5_2:3244474-3244493 None:intergenic 35.0%
TAGATAGGTTCATACCCAAA+TGG + chr5_2:3244475-3244494 None:intergenic 35.0%
ATTCTTCCAATAGGGTTAAG+AGG + chr5_2:3244515-3244534 None:intergenic 35.0%
GATGAAGTGATTCTTCCAAT+AGG + chr5_2:3244524-3244543 None:intergenic 35.0%
! ATAGGGTTCTTTGGAAAAGA+GGG + chr5_2:3244653-3244672 None:intergenic 35.0%
! AATAGGGTTCTTTGGAAAAG+AGG + chr5_2:3244654-3244673 None:intergenic 35.0%
TTTGGACTAATAGGGTTCTT+TGG + chr5_2:3244662-3244681 None:intergenic 35.0%
!!! TTCTTGTGCTTTTTCACCAA+GGG - chr5_2:3244745-3244764 Msa0749740:CDS 35.0%
TTAGACGACTCATTGAGAAA+AGG + chr5_2:3244824-3244843 None:intergenic 35.0%
TTTCTCAATGAGTCGTCTAA+CGG - chr5_2:3244824-3244843 Msa0749740:intron 35.0%
AATTGGATCTCTGGTAACAA+TGG - chr5_2:3244893-3244912 Msa0749740:intron 35.0%
!! TCTGCAAATGATGCTAGTTT+TGG - chr5_2:3244947-3244966 Msa0749740:CDS 35.0%
!!! AGTTTTGGTGTTGATGAAAG+TGG - chr5_2:3244962-3244981 Msa0749740:CDS 35.0%
CATGTCTTTACTTTGCTAGA+GGG - chr5_2:3245005-3245024 Msa0749740:CDS 35.0%
!! GCTAGAGGGTTTTGTAAAAA+TGG - chr5_2:3245019-3245038 Msa0749740:CDS 35.0%
GATTCGATTGATGCAAATTC+CGG - chr5_2:3245067-3245086 Msa0749740:intron 35.0%
AACAACATGAAGAGTTCATG+AGG - chr5_2:3245125-3245144 Msa0749740:intron 35.0%
TATTTCAACATTACTGGTCG+GGG - chr5_2:3245431-3245450 Msa0749740:intron 35.0%
AGCAAGAAACTCATTCCTTT+CGG + chr5_2:3245462-3245481 None:intergenic 35.0%
AAGGAATGAGTTTCTTGCTA+TGG - chr5_2:3245463-3245482 Msa0749740:intron 35.0%
! AGTTTCTTGCTATGGTTTCT+GGG - chr5_2:3245471-3245490 Msa0749740:intron 35.0%
TTATTCGCGCATACATGAAA+TGG - chr5_2:3245659-3245678 Msa0749740:intron 35.0%
GTGGAACCTGGAATAATTAA+TGG + chr5_2:3245716-3245735 None:intergenic 35.0%
TCAAAAATCCATCTTCCCTA+GGG + chr5_2:3245838-3245857 None:intergenic 35.0%
ATCAAAAATCCATCTTCCCT+AGG + chr5_2:3245839-3245858 None:intergenic 35.0%
ACATTACTTAGTTAGGAGTC+AGG + chr5_2:3245878-3245897 None:intergenic 35.0%
! GGTTTATCCTGTACATTTTC+AGG - chr5_2:3246116-3246135 Msa0749740:intron 35.0%
AGTGATACCTGAAAATGTAC+AGG + chr5_2:3246126-3246145 None:intergenic 35.0%
ACAACCAATGTTCTTTCAGT+TGG + chr5_2:3246482-3246501 None:intergenic 35.0%
AAGTTCATGTACTACTAGCA+TGG + chr5_2:3246565-3246584 None:intergenic 35.0%
GTAAGAACCTACCTAATGAT+AGG + chr5_2:3246825-3246844 None:intergenic 35.0%
GTTATTGCAATCATGACATC+TGG - chr5_2:3246854-3246873 Msa0749740:intron 35.0%
! ACTTTTACAGACAGACACTA+CGG + chr5_2:3246922-3246941 None:intergenic 35.0%
GTGAGAGTCATATTATCGAA+AGG - chr5_2:3247088-3247107 Msa0749740:intron 35.0%
ACGTGAGTCACATATGAAAT+GGG + chr5_2:3247119-3247138 None:intergenic 35.0%
AAGATGTCAACTTACTTGTC+AGG + chr5_2:3247178-3247197 None:intergenic 35.0%
TTGGGACTAATCATGTATAC+AGG - chr5_2:3247243-3247262 Msa0749740:intron 35.0%
TTACCAGGATGGAAATCAAA+AGG + chr5_2:3247350-3247369 None:intergenic 35.0%
GAGAAATTTGATTACCAGGA+TGG + chr5_2:3247361-3247380 None:intergenic 35.0%
AGGTGAGAAATTTGATTACC+AGG + chr5_2:3247365-3247384 None:intergenic 35.0%
GGTAATCAAATTTCTCACCT+TGG - chr5_2:3247365-3247384 Msa0749740:CDS 35.0%
!! ATGGTTGCTTTAGAGGAAAA+AGG + chr5_2:3247451-3247470 None:intergenic 35.0%
TTCTTGTTCCTGCATGAAAT+AGG + chr5_2:3247505-3247524 None:intergenic 35.0%
CTTATTGAGAAGGAAAATGG+AGG - chr5_2:3247547-3247566 Msa0749740:intron 35.0%
! AACATGGCTATGAAGTTGAT+GGG + chr5_2:3247708-3247727 None:intergenic 35.0%
TAACATGGCTATGAAGTTGA+TGG + chr5_2:3247709-3247728 None:intergenic 35.0%
AAATCTCCTTGGATGTTATC+AGG + chr5_2:3247749-3247768 None:intergenic 35.0%
! AACATCCAAGGAGATTTTAC+AGG - chr5_2:3247752-3247771 Msa0749740:CDS 35.0%
ACTAACCTGTAAAATCTCCT+TGG + chr5_2:3247760-3247779 None:intergenic 35.0%
AGAACTACACCATAGTATAC+AGG + chr5_2:3247783-3247802 None:intergenic 35.0%
GTAAGCTGTTAAAACCATGT+TGG + chr5_2:3247808-3247827 None:intergenic 35.0%
GTTAACATACTTTCCATTGC+AGG - chr5_2:3247831-3247850 Msa0749740:CDS 35.0%
!! TTGTTGACTCTACAGAAATG+TGG - chr5_2:3248092-3248111 Msa0749740:CDS 35.0%
AAAAATACAAGAGGCAAGCA+AGG - chr5_2:3248398-3248417 Msa0749740:CDS 35.0%
AAAATACAAGAGGCAAGCAA+GGG - chr5_2:3248399-3248418 Msa0749740:CDS 35.0%
GAGGGGGATCATATTAATTA+GGG - chr5_2:3248422-3248441 Msa0749740:CDS 35.0%
!!! CTTAGTTTTGATGCTTCTCT+AGG + chr5_2:3248634-3248653 None:intergenic 35.0%
!! CTAGAGAAGCATCAAAACTA+AGG - chr5_2:3248632-3248651 Msa0749740:five_prime_UTR 35.0%
TGCAATATGTATTGCTTGGT+CGG + chr5_2:3248701-3248720 None:intergenic 35.0%
TGTATAGCCACCAAAACCTA+CGG - chr5_2:3244152-3244171 Msa0749740:three_prime_UTR 40.0%
GACTTTAGCAAGAACCACAT+TGG + chr5_2:3244321-3244340 None:intergenic 40.0%
TAGCAAGGTTATGAAGAACC+TGG + chr5_2:3244439-3244458 None:intergenic 40.0%
TAAGAGGTGAAGGTGAAGAA+GGG + chr5_2:3244499-3244518 None:intergenic 40.0%
TTAAGAGGTGAAGGTGAAGA+AGG + chr5_2:3244500-3244519 None:intergenic 40.0%
AAATCTTCTCCTAGAGGAAC+TGG - chr5_2:3244563-3244582 Msa0749740:intron 40.0%
TTACTAAGTCCAGTTCCTCT+AGG + chr5_2:3244575-3244594 None:intergenic 40.0%
AGAGGAACTGGACTTAGTAA+TGG - chr5_2:3244575-3244594 Msa0749740:intron 40.0%
CATTACCAGAAGGTGATGAA+GGG + chr5_2:3244619-3244638 None:intergenic 40.0%
ACATTACCAGAAGGTGATGA+AGG + chr5_2:3244620-3244639 None:intergenic 40.0%
! CATCACCTTCTGGTAATGTT+TGG - chr5_2:3244621-3244640 Msa0749740:exon 40.0%
TGTGACCAAACATTACCAGA+AGG + chr5_2:3244629-3244648 None:intergenic 40.0%
!!! GTTCTTGTGCTTTTTCACCA+AGG - chr5_2:3244744-3244763 Msa0749740:CDS 40.0%
!! TGGTGTTGATGAAAGTGGAT+TGG - chr5_2:3244967-3244986 Msa0749740:CDS 40.0%
!! GGTGTTGATGAAAGTGGATT+GGG - chr5_2:3244968-3244987 Msa0749740:CDS 40.0%
!! GATGAAAGTGGATTGGGATT+TGG - chr5_2:3244974-3244993 Msa0749740:CDS 40.0%
CCTCTAGCAAAGTAAAGACA+TGG + chr5_2:3245007-3245026 None:intergenic 40.0%
CCATGTCTTTACTTTGCTAG+AGG - chr5_2:3245004-3245023 Msa0749740:CDS 40.0%
TGTTCCAATCCCTCAAACTT+GGG + chr5_2:3245109-3245128 None:intergenic 40.0%
TTGTTCCAATCCCTCAAACT+TGG + chr5_2:3245110-3245129 None:intergenic 40.0%
TGAAGAGTTCATGAGGTTCA+AGG - chr5_2:3245132-3245151 Msa0749740:intron 40.0%
ATGTACTTGTCGTACGATAC+CGG + chr5_2:3245217-3245236 None:intergenic 40.0%
AGCAGCACAGTGATAATCAA+AGG - chr5_2:3245251-3245270 Msa0749740:CDS 40.0%
TATGTTACATTTCAGAGCCG+TGG - chr5_2:3245379-3245398 Msa0749740:CDS 40.0%
GCAAGAAACTCATTCCTTTC+GGG + chr5_2:3245461-3245480 None:intergenic 40.0%
! GAGTTTCTTGCTATGGTTTC+TGG - chr5_2:3245470-3245489 Msa0749740:intron 40.0%
! GTTTCTTGCTATGGTTTCTG+GGG - chr5_2:3245472-3245491 Msa0749740:intron 40.0%
TCTTTGAATGTGCTTTCAGC+AGG + chr5_2:3245539-3245558 None:intergenic 40.0%
! AAGATGTTTCGGAGTACTTC+AGG - chr5_2:3245561-3245580 Msa0749740:CDS 40.0%
CATGATATATGTCTCCCATG+AGG - chr5_2:3246088-3246107 Msa0749740:intron 40.0%
AGAATCGTGGACATTTAAGC+AGG + chr5_2:3246360-3246379 None:intergenic 40.0%
AAGGGGAGAATCCAAATACA+CGG - chr5_2:3246445-3246464 Msa0749740:CDS 40.0%
!! TGTTTGTTGTCGTTACCCTA+CGG - chr5_2:3246611-3246630 Msa0749740:intron 40.0%
TTTGTGAACCATAGGGTTTG+TGG - chr5_2:3246690-3246709 Msa0749740:intron 40.0%
GGTAAGGAATTCTCACATCT+TGG + chr5_2:3247021-3247040 None:intergenic 40.0%
GTTTGTCACCTTTGTCTTTC+CGG - chr5_2:3247060-3247079 Msa0749740:intron 40.0%
AATATGACTCTCACTGTCTC+CGG + chr5_2:3247082-3247101 None:intergenic 40.0%
CGTGAGTCACATATGAAATG+GGG + chr5_2:3247118-3247137 None:intergenic 40.0%
CACGTGAGTCACATATGAAA+TGG + chr5_2:3247120-3247139 None:intergenic 40.0%
! ACTTTTCCCTTCTCCTTGTA+GGG + chr5_2:3247154-3247173 None:intergenic 40.0%
! AACTTTTCCCTTCTCCTTGT+AGG + chr5_2:3247155-3247174 None:intergenic 40.0%
!! TCTTTAGAGTCAAACGCAGA+GGG + chr5_2:3247326-3247345 None:intergenic 40.0%
!! TTCTTTAGAGTCAAACGCAG+AGG + chr5_2:3247327-3247346 None:intergenic 40.0%
!!! GAACCTTTTGATTTCCATCC+TGG - chr5_2:3247344-3247363 Msa0749740:CDS 40.0%
CGAGTAGAATAAAGAAGCCA+AGG + chr5_2:3247385-3247404 None:intergenic 40.0%
TCACCAAACCTATTTCATGC+AGG - chr5_2:3247494-3247513 Msa0749740:CDS 40.0%
GTTCCTGCATGAAATAGGTT+TGG + chr5_2:3247500-3247519 None:intergenic 40.0%
AAGTCCTTGAACTCCAAGAA+AGG - chr5_2:3247591-3247610 Msa0749740:intron 40.0%
!! AGTTGATGGGGAAAAACCAA+AGG + chr5_2:3247695-3247714 None:intergenic 40.0%
!! ACATGGCTATGAAGTTGATG+GGG + chr5_2:3247707-3247726 None:intergenic 40.0%
AAAGACCTGCATGGTTAACA+TGG + chr5_2:3247724-3247743 None:intergenic 40.0%
CTTTCTCCTGATAACATCCA+AGG - chr5_2:3247740-3247759 Msa0749740:CDS 40.0%
! CAGGTTAGTCCTGTATACTA+TGG - chr5_2:3247771-3247790 Msa0749740:CDS 40.0%
!! TGGTGTAGTTCTAACCAACA+TGG - chr5_2:3247791-3247810 Msa0749740:CDS 40.0%
TGCTGAGAGTGGGAATTTAA+AGG - chr5_2:3247959-3247978 Msa0749740:CDS 40.0%
AAGGATGTTGCAAAGTCTGA+AGG - chr5_2:3247978-3247997 Msa0749740:CDS 40.0%
!!! TAATCTCCAGCTGCTTTTGT+TGG + chr5_2:3248150-3248169 None:intergenic 40.0%
TGAATCGACAACATCTGCTT+CGG - chr5_2:3248242-3248261 Msa0749740:CDS 40.0%
AAATACAAGAGGCAAGCAAG+GGG - chr5_2:3248400-3248419 Msa0749740:CDS 40.0%
GGAGGGGGATCATATTAATT+AGG - chr5_2:3248421-3248440 Msa0749740:CDS 40.0%
!! ATGCTTCTCTAGGATGATCT+AGG + chr5_2:3248624-3248643 None:intergenic 40.0%
AGATCTTGTGTGAAATTGCG+CGG - chr5_2:3248924-3248943 Msa0749740:five_prime_UTR 40.0%
CTCTCTGACGCTTCAAAGAT+AGG - chr5_2:3244053-3244072 Msa0749740:three_prime_UTR 45.0%
! TTACCAGTAGCCGTAGGTTT+TGG + chr5_2:3244165-3244184 None:intergenic 45.0%
AAAACCTACGGCTACTGGTA+AGG - chr5_2:3244164-3244183 Msa0749740:three_prime_UTR 45.0%
TTTAGCATGTTGTCCTGACC+AGG - chr5_2:3244418-3244437 Msa0749740:intron 45.0%
AGGTTATGAAGAACCTGGTC+AGG + chr5_2:3244434-3244453 None:intergenic 45.0%
GGGTCTTTACCCTAATAGCA+AGG + chr5_2:3244454-3244473 None:intergenic 45.0%
AAGGTGAAGAAGGGGTAGAT+AGG + chr5_2:3244490-3244509 None:intergenic 45.0%
AAGAGGTGAAGGTGAAGAAG+GGG + chr5_2:3244498-3244517 None:intergenic 45.0%
CCAATAGGGTTAAGAGGTGA+AGG + chr5_2:3244509-3244528 None:intergenic 45.0%
CCTTCACCTCTTAACCCTAT+TGG - chr5_2:3244506-3244525 Msa0749740:intron 45.0%
!! GAGAATATCCAAGGTGCTGT+TGG - chr5_2:3244704-3244723 Msa0749740:CDS 45.0%
!! AATATCCAAGGTGCTGTTGG+TGG - chr5_2:3244707-3244726 Msa0749740:CDS 45.0%
GTTGATCCGCGTCTTGAAAT+GGG - chr5_2:3244857-3244876 Msa0749740:intron 45.0%
!! TGTTGGTTCACCCAAGTTTG+AGG - chr5_2:3245096-3245115 Msa0749740:intron 45.0%
! GTTGGTTCACCCAAGTTTGA+GGG - chr5_2:3245097-3245116 Msa0749740:intron 45.0%
TTCACCCAAGTTTGAGGGAT+TGG - chr5_2:3245102-3245121 Msa0749740:intron 45.0%
TGCTCAGCAGCATCAAAGAA+TGG - chr5_2:3245156-3245175 Msa0749740:CDS 45.0%
TCAGCAGCATCAAAGAATGG+TGG - chr5_2:3245159-3245178 Msa0749740:CDS 45.0%
GAATGTGCTTTCAGCAGGAA+AGG + chr5_2:3245534-3245553 None:intergenic 45.0%
!! TCTCTTTAAAGCGTGGAACC+TGG + chr5_2:3245728-3245747 None:intergenic 45.0%
CACAGGCAAAACCACTTTCA+TGG + chr5_2:3245789-3245808 None:intergenic 45.0%
!! TTCCAAGAAGCATCAGACCA+GGG + chr5_2:3245814-3245833 None:intergenic 45.0%
GGATAAACCTGTCTCCTCAT+GGG + chr5_2:3246105-3246124 None:intergenic 45.0%
AGGATAAACCTGTCTCCTCA+TGG + chr5_2:3246106-3246125 None:intergenic 45.0%
GCAATACTATGACTGCCGTA+GGG + chr5_2:3246629-3246648 None:intergenic 45.0%
AGCAATACTATGACTGCCGT+AGG + chr5_2:3246630-3246649 None:intergenic 45.0%
GGAATTCTCACATCTTGGAC+AGG + chr5_2:3247016-3247035 None:intergenic 45.0%
! AACATGCGCTTTTGCTGGTA+AGG + chr5_2:3247037-3247056 None:intergenic 45.0%
! TACCAGCAAAAGCGCATGTT+TGG - chr5_2:3247037-3247056 Msa0749740:intron 45.0%
! ACCAGCAAAAGCGCATGTTT+GGG - chr5_2:3247038-3247057 Msa0749740:intron 45.0%
TGTGCTTGTGAAACCCTACA+AGG - chr5_2:3247138-3247157 Msa0749740:CDS 45.0%
TGTGAAACCCTACAAGGAGA+AGG - chr5_2:3247144-3247163 Msa0749740:CDS 45.0%
GTGAAACCCTACAAGGAGAA+GGG - chr5_2:3247145-3247164 Msa0749740:CDS 45.0%
CAAATTGCTGCTGCTGATGT+TGG + chr5_2:3247274-3247293 None:intergenic 45.0%
ATCAGCAGCAGCAATTTGAG+AGG - chr5_2:3247276-3247295 Msa0749740:intron 45.0%
TCAGCAGCAGCAATTTGAGA+GGG - chr5_2:3247277-3247296 Msa0749740:intron 45.0%
AACGCAGAGGGACTTAAACA+TGG + chr5_2:3247314-3247333 None:intergenic 45.0%
AAAACTGAAGCAGCACGAGA+TGG + chr5_2:3247470-3247489 None:intergenic 45.0%
TCCTTGAACTCCAAGAAAGG+AGG - chr5_2:3247594-3247613 Msa0749740:intron 45.0%
CATAGCCATGTTAACCATGC+AGG - chr5_2:3247716-3247735 Msa0749740:CDS 45.0%
TATCAGGAGAAAGACCTGCA+TGG + chr5_2:3247733-3247752 None:intergenic 45.0%
CTAAAGAACCAGCAGAAGTG+AGG + chr5_2:3247869-3247888 None:intergenic 45.0%
!! CTCACTTCTGCTGGTTCTTT+AGG - chr5_2:3247867-3247886 Msa0749740:CDS 45.0%
GTAGCAGCATCAATGCAAGA+TGG + chr5_2:3247933-3247952 None:intergenic 45.0%
! AAGTCTGAAGGCGTAGATCT+CGG - chr5_2:3247990-3248009 Msa0749740:CDS 45.0%
AGCAAAGAGACTGTCAGGAA+GGG + chr5_2:3248124-3248143 None:intergenic 45.0%
AAGCAAAGAGACTGTCAGGA+AGG + chr5_2:3248125-3248144 None:intergenic 45.0%
GTACTCTCATTAGCCACTTC+CGG + chr5_2:3248192-3248211 None:intergenic 45.0%
GAATCGACAACATCTGCTTC+GGG - chr5_2:3248243-3248262 Msa0749740:CDS 45.0%
TTGTGTGAAATTGCGCGGAT+AGG - chr5_2:3248929-3248948 Msa0749740:five_prime_UTR 45.0%
CATACCTTACCAGTAGCCGT+AGG + chr5_2:3244171-3244190 None:intergenic 50.0%
AGGAACCCTTCATCACCTTC+TGG - chr5_2:3244611-3244630 Msa0749740:exon 50.0%
GTCGTCTAACGGCGATGATT+TGG - chr5_2:3244835-3244854 Msa0749740:intron 50.0%
GGTTGATCCGCGTCTTGAAA+TGG - chr5_2:3244856-3244875 Msa0749740:intron 50.0%
GGTGGTCAGAATTGGATCTC+TGG - chr5_2:3244884-3244903 Msa0749740:intron 50.0%
!! GCAAATTCCGGTGCTGTTGT+TGG - chr5_2:3245079-3245098 Msa0749740:intron 50.0%
! TTCTGGGGACAAGCCTAACT+CGG - chr5_2:3245487-3245506 Msa0749740:intron 50.0%
!! ACGACTTGCTAATGCTGTGC+AGG - chr5_2:3245599-3245618 Msa0749740:CDS 50.0%
!! CTTCCAAGAAGCATCAGACC+AGG + chr5_2:3245815-3245834 None:intergenic 50.0%
TGATGCTTCTTGGAAGCCCT+AGG - chr5_2:3245819-3245838 Msa0749740:CDS 50.0%
GATGCTTCTTGGAAGCCCTA+GGG - chr5_2:3245820-3245839 Msa0749740:CDS 50.0%
GGAGTCAGGATCAACATCAG+AGG + chr5_2:3245864-3245883 None:intergenic 50.0%
TATGTCTCCCATGAGGAGAC+AGG - chr5_2:3246095-3246114 Msa0749740:intron 50.0%
! ACCCAAACATGCGCTTTTGC+TGG + chr5_2:3247042-3247061 None:intergenic 50.0%
CACTGTCTCCGGAAAGACAA+AGG + chr5_2:3247071-3247090 None:intergenic 50.0%
CAGCAGCAGCAATTTGAGAG+GGG - chr5_2:3247278-3247297 Msa0749740:intron 50.0%
! GCACGAGATGGTTGCTTTAG+AGG + chr5_2:3247458-3247477 None:intergenic 50.0%
GAGAAGGAAAATGGAGGAGC+AGG - chr5_2:3247553-3247572 Msa0749740:intron 50.0%
GCCTCCTTTCTTGGAGTTCA+AGG + chr5_2:3247598-3247617 None:intergenic 50.0%
GACTCTTCAGCCTCCTTTCT+TGG + chr5_2:3247607-3247626 None:intergenic 50.0%
! TCTCTCTGTTGGTGCTCCTT+TGG - chr5_2:3247676-3247695 Msa0749740:CDS 50.0%
CTTTCCATTGCAGGCTACAG+TGG - chr5_2:3247840-3247859 Msa0749740:CDS 50.0%
GGTGAAGCAAAGAGACTGTC+AGG + chr5_2:3248129-3248148 None:intergenic 50.0%
GCTTCACCAACAAAAGCAGC+TGG - chr5_2:3248141-3248160 Msa0749740:CDS 50.0%
TCCGTCTGATTTCTCTCCAC+CGG - chr5_2:3248170-3248189 Msa0749740:CDS 50.0%
TCCGGTGGAGAGAAATCAGA+CGG + chr5_2:3248174-3248193 None:intergenic 50.0%
TGATTTCTCTCCACCGGAAG+TGG - chr5_2:3248176-3248195 Msa0749740:CDS 50.0%
ATCTGCTTCGGGTGACAACA+TGG - chr5_2:3248254-3248273 Msa0749740:CDS 50.0%
!! CCAGTAGCCGTAGGTTTTGG+TGG + chr5_2:3244162-3244181 None:intergenic 55.0%
CCACCAAAACCTACGGCTAC+TGG - chr5_2:3244159-3244178 Msa0749740:three_prime_UTR 55.0%
CCAACGCCCATTTCAAGACG+CGG + chr5_2:3244866-3244885 None:intergenic 55.0%
!! CGTCTTGAAATGGGCGTTGG+TGG - chr5_2:3244866-3244885 Msa0749740:intron 55.0%
!! TGGGCGTTGGTGGTCAGAAT+TGG - chr5_2:3244876-3244895 Msa0749740:intron 55.0%
GGGTGAACCAACAACAGCAC+CGG + chr5_2:3245089-3245108 None:intergenic 55.0%
!! GCTGCATCACAACTTGCTGC+TGG - chr5_2:3245181-3245200 Msa0749740:CDS 55.0%
!! GCATCACAACTTGCTGCTGG+TGG - chr5_2:3245184-3245203 Msa0749740:CDS 55.0%
TGCTGCTGGTGGAACATCAC+CGG - chr5_2:3245195-3245214 Msa0749740:CDS 55.0%
ACATTTCAGAGCCGTGGCTG+CGG - chr5_2:3245385-3245404 Msa0749740:intron 55.0%
TCAACATTACTGGTCGGGGC+AGG - chr5_2:3245435-3245454 Msa0749740:intron 55.0%
ACAAGCCTAACTCGGCTTCG+CGG - chr5_2:3245495-3245514 Msa0749740:intron 55.0%
GGTGTGCCCAGTGAAAATCG+TGG + chr5_2:3245768-3245787 None:intergenic 55.0%
CACTGGGCACACCATGAAAG+TGG - chr5_2:3245775-3245794 Msa0749740:CDS 55.0%
CTCCCTGGTCTGATGCTTCT+TGG - chr5_2:3245809-3245828 Msa0749740:CDS 55.0%
CTTGGAAGCCCTAGGGAAGA+TGG - chr5_2:3245827-3245846 Msa0749740:CDS 55.0%
GATGTGCACGTGCAGAATCG+TGG + chr5_2:3246373-3246392 None:intergenic 55.0%
TCTGAGGGCCACAAACCCTA+TGG + chr5_2:3246701-3246720 None:intergenic 55.0%
TAGGGTTTGTGGCCCTCAGA+AGG - chr5_2:3246701-3246720 Msa0749740:intron 55.0%
CTACTGCTGCTGCTGAGAGT+GGG - chr5_2:3247949-3247968 Msa0749740:CDS 55.0%
! TGAAGGCGTAGATCTCGGCA+TGG - chr5_2:3247995-3248014 Msa0749740:CDS 55.0%
! GAAGGCGTAGATCTCGGCAT+GGG - chr5_2:3247996-3248015 Msa0749740:CDS 55.0%
AAGGCGTAGATCTCGGCATG+GGG - chr5_2:3247997-3248016 Msa0749740:CDS 55.0%
CTCTCATTAGCCACTTCCGG+TGG + chr5_2:3248189-3248208 None:intergenic 55.0%
TACAAGAGGCAAGCAAGGGG+AGG - chr5_2:3248403-3248422 Msa0749740:CDS 55.0%
ACAAGAGGCAAGCAAGGGGA+GGG - chr5_2:3248404-3248423 Msa0749740:CDS 55.0%
CACTGCCACCAACAGCACCT+TGG + chr5_2:3244715-3244734 None:intergenic 60.0%
!! CAAGGTGCTGTTGGTGGCAG+TGG - chr5_2:3244713-3244732 Msa0749740:CDS 60.0%
CCGCGTCTTGAAATGGGCGT+TGG - chr5_2:3244863-3244882 Msa0749740:intron 60.0%
GCTGCGGCAGCATTTGCGAT+GGG - chr5_2:3245401-3245420 Msa0749740:intron 60.0%
ATCTGCCGCGAAGCCGAGTT+AGG + chr5_2:3245503-3245522 None:intergenic 60.0%
!! GTGGTTTTGCCTGTGCTCCC+TGG - chr5_2:3245794-3245813 Msa0749740:CDS 60.0%
! AGCATCAGACCAGGGAGCAC+AGG + chr5_2:3245806-3245825 None:intergenic 60.0%
!! CTGCGCTGGTGGTGGTGAAT+CGG + chr5_2:3247656-3247675 None:intergenic 60.0%
CAACAGAGAGACTGCGCTGG+TGG + chr5_2:3247667-3247686 None:intergenic 60.0%
CACCAGCGCAGTCTCTCTGT+TGG - chr5_2:3247665-3247684 Msa0749740:CDS 60.0%
CACCAACAGAGAGACTGCGC+TGG + chr5_2:3247670-3247689 None:intergenic 60.0%
GCTGCCACTGTAGCCTGCAA+TGG + chr5_2:3247847-3247866 None:intergenic 60.0%
AGTGGCAGCCTCACTTCTGC+TGG - chr5_2:3247858-3247877 Msa0749740:CDS 60.0%
! AGGTGCTGCATCTGAGCAGC+AGG - chr5_2:3247887-3247906 Msa0749740:CDS 60.0%
GCTACTGCTGCTGCTGAGAG+TGG - chr5_2:3247948-3247967 Msa0749740:CDS 60.0%
CAAGAGGCAAGCAAGGGGAG+GGG - chr5_2:3248405-3248424 Msa0749740:CDS 60.0%
AAGAGGCAAGCAAGGGGAGG+GGG - chr5_2:3248406-3248425 Msa0749740:CDS 60.0%
!! GCTGTTGGTGGCAGTGGTGC+TGG - chr5_2:3244719-3244738 Msa0749740:CDS 65.0%
!! GTTGGTGGCAGTGGTGCTGG+TGG - chr5_2:3244722-3244741 Msa0749740:CDS 65.0%
CGCAAATGCTGCCGCAGCCA+CGG + chr5_2:3245399-3245418 None:intergenic 65.0%
GGCTGCGGCAGCATTTGCGA+TGG - chr5_2:3245400-3245419 Msa0749740:intron 65.0%
! CAGAGAGACTGCGCTGGTGG+TGG + chr5_2:3247664-3247683 None:intergenic 65.0%
CTGGTCGGGGCAGGCCCGAA+AGG - chr5_2:3245444-3245463 Msa0749740:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 3243962 3248953 3243962 ID=Msa0749740;Name=Msa0749740
chr5_2 mRNA 3243962 3248953 3243962 ID=Msa0749740-mRNA-1;Parent=Msa0749740;Name=Msa0749740-mRNA-1;_AED=0.14;_eAED=0.14;_QI=337|0.8|0.81|1|0.8|0.72|11|466|742
chr5_2 exon 3243962 3244359 3243962 ID=Msa0749740-mRNA-1:exon:1124;Parent=Msa0749740-mRNA-1
chr5_2 exon 3244472 3244522 3244472 ID=Msa0749740-mRNA-1:exon:1123;Parent=Msa0749740-mRNA-1
chr5_2 exon 3244611 3244808 3244611 ID=Msa0749740-mRNA-1:exon:1122;Parent=Msa0749740-mRNA-1
chr5_2 exon 3244897 3245062 3244897 ID=Msa0749740-mRNA-1:exon:1121;Parent=Msa0749740-mRNA-1
chr5_2 exon 3245142 3245399 3245142 ID=Msa0749740-mRNA-1:exon:1120;Parent=Msa0749740-mRNA-1
chr5_2 exon 3245550 3245650 3245550 ID=Msa0749740-mRNA-1:exon:1119;Parent=Msa0749740-mRNA-1
chr5_2 exon 3245733 3245912 3245733 ID=Msa0749740-mRNA-1:exon:1118;Parent=Msa0749740-mRNA-1
chr5_2 exon 3246375 3246467 3246375 ID=Msa0749740-mRNA-1:exon:1117;Parent=Msa0749740-mRNA-1
chr5_2 exon 3247100 3247186 3247100 ID=Msa0749740-mRNA-1:exon:1116;Parent=Msa0749740-mRNA-1
chr5_2 exon 3247333 3247521 3247333 ID=Msa0749740-mRNA-1:exon:1115;Parent=Msa0749740-mRNA-1
chr5_2 exon 3247643 3248953 3247643 ID=Msa0749740-mRNA-1:exon:1114;Parent=Msa0749740-mRNA-1
chr5_2 five_prime_UTR 3248617 3248953 3248617 ID=Msa0749740-mRNA-1:five_prime_utr;Parent=Msa0749740-mRNA-1
chr5_2 CDS 3247643 3248616 3247643 ID=Msa0749740-mRNA-1:cds;Parent=Msa0749740-mRNA-1
chr5_2 CDS 3247333 3247521 3247333 ID=Msa0749740-mRNA-1:cds;Parent=Msa0749740-mRNA-1
chr5_2 CDS 3247100 3247186 3247100 ID=Msa0749740-mRNA-1:cds;Parent=Msa0749740-mRNA-1
chr5_2 CDS 3246375 3246467 3246375 ID=Msa0749740-mRNA-1:cds;Parent=Msa0749740-mRNA-1
chr5_2 CDS 3245733 3245912 3245733 ID=Msa0749740-mRNA-1:cds;Parent=Msa0749740-mRNA-1
chr5_2 CDS 3245550 3245650 3245550 ID=Msa0749740-mRNA-1:cds;Parent=Msa0749740-mRNA-1
chr5_2 CDS 3245142 3245399 3245142 ID=Msa0749740-mRNA-1:cds;Parent=Msa0749740-mRNA-1
chr5_2 CDS 3244897 3245062 3244897 ID=Msa0749740-mRNA-1:cds;Parent=Msa0749740-mRNA-1
chr5_2 CDS 3244628 3244808 3244628 ID=Msa0749740-mRNA-1:cds;Parent=Msa0749740-mRNA-1
chr5_2 three_prime_UTR 3244611 3244627 3244611 ID=Msa0749740-mRNA-1:three_prime_utr;Parent=Msa0749740-mRNA-1
chr5_2 three_prime_UTR 3244472 3244522 3244472 ID=Msa0749740-mRNA-1:three_prime_utr;Parent=Msa0749740-mRNA-1
chr5_2 three_prime_UTR 3243962 3244359 3243962 ID=Msa0749740-mRNA-1:three_prime_utr;Parent=Msa0749740-mRNA-1
Gene Sequence

>Msa0749740

ATGGGTTCTTATGAAGCAACCAATGTGGTTCTTGCTAAAGTCAAAAACTTTGACCCTGAAAATGCTTCAAAAATCATGGGTTTTCTTCTCATGAACCTTGAAGAATATGAACTTGTTCGTTTAGCATGTTGTCCTGACCAGGTTCTTCATAACCTTGCTATTAGGGTAAAGACCCATTTGGGTATGAACCTATCTACCCCTTCTTCACCTTCACCTCTTAACCCTATTGGAAGAATCACTTCATCTTCCAATAACCCTTTTTCAAAATCTTCTCCTAGAGGAACTGGACTTAGTAATGGTTTTGACTTCAATAGGAACCCTTCATCACCTTCTGGTAATGTTTGGTCACAACCCTCTTTTCCAAAGAACCCTATTAGTCCAAAGTTTAATCCTTTAATGTCTTATGAGAATATCCAAGGTGCTGTTGGTGGCAGTGGTGCTGGTGGTTCTTGTGCTTTTTCACCAAGGGTTAATAATGGTGATTATGATTTTGTTGATGAACAACAGCTGAATGAGTGTTTTCCTTTTCTCAATGAGTCGTCTAACGGCGATGATTTGGTTGATCCGCGTCTTGAAATGGGCGTTGGTGGTCAGAATTGGATCTCTGGTAACAATGGCGATGCTCATAATATTCATAAGAGGAGTTTTTCTGCAAATGATGCTAGTTTTGGTGTTGATGAAAGTGGATTGGGATTTGGTTTTAAGCCATGTCTTTACTTTGCTAGAGGGTTTTGTAAAAATGGTTCCAATTGTAAGTTTGTTCATGGTGATTCGATTGATGCAAATTCCGGTGCTGTTGTTGGTTCACCCAAGTTTGAGGGATTGGAACAACATGAAGAGTTCATGAGGTTCAAGGCTGCTCAGCAGCATCAAAGAATGGTGGCTGCATCACAACTTGCTGCTGGTGGAACATCACCGGTATCGTACGACAAGTACATTGATCTTCTGATGCAGCAGCACAGTGATAATCAAAGAGCCGTGGCTGCGGCAGCATTTGCGATGGGTGAAGAATATTTCAACATTACTGGTCGGGGCAGGCCCGAAAGGAATGAGTTTCTTGCTATGGTTTCTGGGGACAAGCCTAACTCGGCTTCGCGGCAGATTTACTTGACCTTTCCTGCTGAAAGCACATTCAAAGATGAAGATGTTTCGGAGTACTTCAGGTTCCACGCTTTAAAGAGAATATTTGCGGTAATTTTCCACGATTTTCACTGGGCACACCATGAAAGTGGTTTTGCCTGTGCTCCCTGGGGAGAATCCAAATACACGGAAAATCTATTTCCAACTGAAAGAACATTGGTTGTTGTAGTTCATGTTAAGAAATTCTACGTGAAGTATTCCATCAAATTTGGACCTGTCCAAGATGTGAGAATTCCTTACCAGCAAAAGCGCATGTTTGGGTTTGTCACCTTTGTCTTTCCGGAGACAGTGAGAGTCATATTATCGAAAGGAAATCCCCATTTCATATGTGACTCACGTGTGCTTGTGAAACCCTACAAGGAGAAGGGAAAAGTTCCTGACAAGAGACACCAACATCAGCAGCAGCAATTTGAGAGGGGAGATTTTTCGCCATGTTTAAGTCCCTCTGCGTTTGACTCTAAAGAACCTTTTGATTTCCATCCTGGAACAAGAATGCTATACAATCCACATGATATCTTATTGAGAAGGAAAATGGAGGAGCAGGCTGCTGACTTTCAGCAAGTCCTTGAACTCCAAGAAAGGAGGCTGAAGAGTCTGCAGCTTCCAGATTTCAAGAATAATCCGATTCACCACCACCAGCGCAGTCTCTCTGTTGGTGCTCCTTTGGTTTTTCCCCATCAACTTCATAGCCATGTTAACCATGCAGGTCTTTCTCCTGATAACATCCAAGGAGATTTTACAGGCTACAGTGGCAGCCTCACTTCTGCTGGTTCTTTAGGTGCTGCATCTGAGCAGCAGGCGCTACACAAAGAAGCTGATCCATCTTGCATTGATGCTGCTACTGCTGCTGCTGAGAGTGGGAATTTAAAGGATGTTGCAAAGTCTGAAGGCGTAGATCTCGGCATGGGAAATGTGGAGCACACCCTTCCTGACAGTCTCTTTGCTTCACCAACAAAAGCAGCTGGAGATTATCCGTCTGATTTCTCTCCACCGGAAGTGGCTAATGAGAGTACTGCATTTTCGACTAGCTTGTCTCAGAAGTTTGAATCGACAACATCTGCTTCGGGTGACAACATGGCTTCCGTTTAA
Protein sequence

>Msa0749740

MGSYEATNVVLAKVKNFDPENASKIMGFLLMNLEEYELVRLACCPDQVLHNLAIRVKTHLGMNLSTPSSPSPLNPIGRITSSSNNPFSKSSPRGTGLSNGFDFNRNPSSPSGNVWSQPSFPKNPISPKFNPLMSYENIQGAVGGSGAGGSCAFSPRVNNGDYDFVDEQQLNECFPFLNESSNGDDLVDPRLEMGVGGQNWISGNNGDAHNIHKRSFSANDASFGVDESGLGFGFKPCLYFARGFCKNGSNCKFVHGDSIDANSGAVVGSPKFEGLEQHEEFMRFKAAQQHQRMVAASQLAAGGTSPVSYDKYIDLLMQQHSDNQRAVAAAAFAMGEEYFNITGRGRPERNEFLAMVSGDKPNSASRQIYLTFPAESTFKDEDVSEYFRFHALKRIFAVIFHDFHWAHHESGFACAPWGESKYTENLFPTERTLVVVVHVKKFYVKYSIKFGPVQDVRIPYQQKRMFGFVTFVFPETVRVILSKGNPHFICDSRVLVKPYKEKGKVPDKRHQHQQQQFERGDFSPCLSPSAFDSKEPFDFHPGTRMLYNPHDILLRRKMEEQAADFQQVLELQERRLKSLQLPDFKNNPIHHHQRSLSVGAPLVFPHQLHSHVNHAGLSPDNIQGDFTGYSGSLTSAGSLGAASEQQALHKEADPSCIDAATAAAESGNLKDVAKSEGVDLGMGNVEHTLPDSLFASPTKAAGDYPSDFSPPEVANESTAFSTSLSQKFESTTSASGDNMASV*