AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0750090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0750090 MtrunA17_Chr5g0396381 78.158 760 73 8 1 742 1 685 0.0 1144
Msa0750090 MtrunA17_Chr3g0090551 35.132 760 364 28 1 732 1 659 1.29e-87 290
Msa0750090 MtrunA17_Chr4g0020571 45.033 302 146 7 445 737 342 632 8.62e-63 222
Msa0750090 MtrunA17_Chr4g0020571 43.933 239 103 12 158 387 128 344 7.37e-36 144
Msa0750090 MtrunA17_Chr5g0445571 28.276 435 212 13 178 581 111 476 1.28e-30 127
Msa0750090 MtrunA17_Chr3g0101151 49.242 132 54 4 450 581 335 453 1.11e-25 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0750090 AT5G12440.4 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0750090 AT5G12440.11 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0750090 AT5G12440.12 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0750090 AT5G12440.7 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0750090 AT5G12440.1 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0750090 AT5G12440.9 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0750090 AT5G12440.2 38.556 734 314 32 1 709 1 622 1.71e-111 352
Msa0750090 AT5G12440.3 38.556 734 314 32 1 709 32 653 1.82e-111 353
Msa0750090 AT5G12440.10 38.556 734 314 32 1 709 32 653 1.82e-111 353
Msa0750090 AT5G12440.8 38.556 734 314 32 1 709 32 653 1.82e-111 353
Msa0750090 AT5G12440.5 38.556 734 314 32 1 709 32 653 1.82e-111 353
Msa0750090 AT5G12440.6 38.556 734 314 32 1 709 32 653 1.82e-111 353
Msa0750090 AT3G21100.2 41.071 392 161 18 7 387 7 339 1.28e-57 207
Msa0750090 AT3G21100.2 47.909 263 102 9 446 701 338 572 2.02e-55 201
Msa0750090 AT3G21100.1 41.071 392 161 18 7 387 7 339 1.28e-57 207
Msa0750090 AT3G21100.1 47.909 263 102 9 446 701 338 572 2.02e-55 201
Msa0750090 AT3G21100.4 41.582 392 159 19 7 387 7 339 1.50e-57 206
Msa0750090 AT3G21100.4 47.348 264 103 9 446 701 338 573 1.16e-54 198
Msa0750090 AT3G21100.3 41.582 392 159 19 7 387 7 339 1.50e-57 206
Msa0750090 AT3G21100.3 47.348 264 103 9 446 701 338 573 1.16e-54 198
Msa0750090 AT1G51520.2 30.791 708 266 29 7 707 7 497 1.32e-56 202
Msa0750090 AT1G51520.1 32.753 574 215 24 7 575 7 414 2.47e-54 193
Msa0750090 AT3G51950.1 39.796 294 111 9 446 730 278 514 7.33e-42 160
Msa0750090 AT3G51950.1 42.778 180 75 9 210 387 126 279 2.33e-23 105
Msa0750090 AT3G51950.1 41.489 94 49 3 1 92 1 90 1.86e-11 67.8
Msa0750090 AT3G51950.3 39.796 294 111 9 446 730 278 514 7.33e-42 160
Msa0750090 AT3G51950.3 42.778 180 75 9 210 387 126 279 2.33e-23 105
Msa0750090 AT3G51950.3 41.489 94 49 3 1 92 1 90 1.86e-11 67.8
Msa0750090 AT3G51950.2 39.796 294 111 9 446 730 278 514 7.33e-42 160
Msa0750090 AT3G51950.2 42.778 180 75 9 210 387 126 279 2.33e-23 105
Msa0750090 AT3G51950.2 41.489 94 49 3 1 92 1 90 1.86e-11 67.8
Msa0750090 AT3G51950.4 39.796 294 111 9 446 730 278 514 7.33e-42 160
Msa0750090 AT3G51950.4 42.778 180 75 9 210 387 126 279 2.33e-23 105
Msa0750090 AT3G51950.4 41.489 94 49 3 1 92 1 90 1.86e-11 67.8
Msa0750090 AT3G63450.6 49.367 158 51 3 446 603 67 195 3.02e-35 136
Msa0750090 AT3G63450.7 49.367 158 53 3 446 603 175 305 1.86e-34 135
Msa0750090 AT3G63450.2 49.367 158 51 3 446 603 175 303 3.33e-34 135
Msa0750090 AT3G63450.1 49.367 158 51 3 446 603 175 303 3.33e-34 135
Msa0750090 AT3G63450.3 49.367 158 53 3 446 603 175 305 3.39e-34 135
Msa0750090 AT3G63450.4 49.367 158 53 3 446 603 175 305 3.39e-34 135
Msa0750090 AT3G63450.5 49.367 158 53 3 446 603 175 305 3.39e-34 135
Msa0750090 AT2G05160.2 67.797 59 19 0 446 504 337 395 4.58e-19 92.0
Msa0750090 AT2G05160.1 67.797 59 19 0 446 504 337 395 4.58e-19 92.0
Msa0750090 AT2G05160.3 67.797 59 19 0 446 504 337 395 6.46e-19 91.3

Find 226 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTTTCTTGCTATGGTTTC+TGG 0.060082 5_2:-3518257 Msa0750090:CDS
GACTCTTCAGCCTCCTTTCT+TGG 0.133175 5_2:+3516123 None:intergenic
GTTTGTCACCTTTGTCTTTC+CGG 0.179944 5_2:-3516667 Msa0750090:CDS
CTCACTTCTGCTGGTTCTTT+AGG 0.186781 5_2:-3515860 Msa0750090:CDS
GGATTAAACTTTGGACTAAT+AGG 0.200781 5_2:+3519059 None:intergenic
CTATGATGAATAACATAAAA+TGG 0.205709 5_2:+3514940 None:intergenic
TTTGGACTAATAGGGTTCTT+TGG 0.231605 5_2:+3519068 None:intergenic
TCTTCATAACCTTGCTATTA+GGG 0.243813 5_2:-3519285 Msa0750090:CDS
GCAAGAAACTCATTCCTTTC+GGG 0.247828 5_2:+3518269 None:intergenic
CCTTCACCTCTTAACCCTAT+TGG 0.270082 5_2:-3519221 Msa0750090:CDS
TTCTTCATAACCTTGCTATT+AGG 0.270313 5_2:-3519286 Msa0750090:CDS
GCCTCCTTTCTTGGAGTTCA+AGG 0.288088 5_2:+3516132 None:intergenic
GGTTGATCCGCGTCTTGAAA+TGG 0.288113 5_2:-3518871 Msa0750090:CDS
GAAGAATATTTCAACATTAC+TGG 0.303045 5_2:-3518302 Msa0750090:CDS
ATATTCTCATAAGACATTAA+AGG 0.311072 5_2:+3519038 None:intergenic
TATCTTATTGAGAAGGAAAA+TGG 0.311434 5_2:-3516183 Msa0750090:CDS
TCTCTCTGTTGGTGCTCCTT+TGG 0.323983 5_2:-3516051 Msa0750090:CDS
ATCGGATTATTCTTGAAATC+TGG 0.325085 5_2:+3516092 None:intergenic
AGACAAAAGCAAAAGAAAAT+AGG 0.326156 5_2:+3514843 None:intergenic
TCTGCAAATGATGCTAGTTT+TGG 0.328687 5_2:-3518780 Msa0750090:CDS
GCTGTTGGTGGCAGTGGTGC+TGG 0.330637 5_2:-3519008 Msa0750090:CDS
CATCACCTTCTGGTAATGTT+TGG 0.334098 5_2:-3519106 Msa0750090:CDS
AGCAAGAAACTCATTCCTTT+CGG 0.335824 5_2:+3518268 None:intergenic
TACCAGCAAAAGCGCATGTT+TGG 0.336745 5_2:-3516690 Msa0750090:CDS
TGCTGAGAGTGGGAATTTAA+AGG 0.339269 5_2:-3515768 Msa0750090:CDS
GATTAAACTTTGGACTAATA+GGG 0.340959 5_2:+3519060 None:intergenic
AAGATGTTTCGGAGTACTTC+AGG 0.343875 5_2:-3518166 Msa0750090:intron
GTCGTCTAACGGCGATGATT+TGG 0.347901 5_2:-3518892 Msa0750090:CDS
TTACCAGTAGCCGTAGGTTT+TGG 0.348499 5_2:+3519565 None:intergenic
AGTTTCTTGCTATGGTTTCT+GGG 0.349367 5_2:-3518256 Msa0750090:CDS
TTTAAGTTCTTTACAATTCA+AGG 0.357372 5_2:-3515444 Msa0750090:intron
GATGAAGTGATTCTTCCAAT+AGG 0.362935 5_2:+3519206 None:intergenic
CACGTGAGTCACATATGAAA+TGG 0.366446 5_2:+3516610 None:intergenic
AAATCTCCTTGGATGTTATC+AGG 0.366797 5_2:+3515981 None:intergenic
GATGAAAGTGGATTGGGATT+TGG 0.371765 5_2:-3518753 Msa0750090:CDS
TTCACCCAAGTTTGAGGGAT+TGG 0.382468 5_2:-3518625 Msa0750090:CDS
ATTCAAAGATGAAGATGTTT+CGG 0.383022 5_2:-3518177 Msa0750090:CDS
AATAATTTGTTGTCTCAGAT+TGG 0.396338 5_2:+3514905 None:intergenic
ACCATGAACAAACTTACAAT+TGG 0.396580 5_2:+3518683 None:intergenic
CTCTCTGACGCTTCAAAGAT+AGG 0.396969 5_2:-3519674 Msa0750090:five_prime_UTR
GACATTAAAGGATTAAACTT+TGG 0.397652 5_2:+3519050 None:intergenic
AAATCTTCTCCTAGAGGAAC+TGG 0.399520 5_2:-3519164 Msa0750090:CDS
TATTAGGGTAAAGACCCATT+TGG 0.399912 5_2:-3519270 Msa0750090:CDS
GAACAAGTTCATATTCTTCA+AGG 0.400230 5_2:+3519333 None:intergenic
CGCTTTAAAGAGAATATTTG+CGG 0.404246 5_2:-3517992 Msa0750090:CDS
TGAATCGACAACATCTGCTT+CGG 0.405313 5_2:-3515485 Msa0750090:CDS
AGGAACCCTTCATCACCTTC+TGG 0.405702 5_2:-3519116 Msa0750090:CDS
TCCAATTGTAAGTTTGTTCA+TGG 0.406070 5_2:-3518684 Msa0750090:CDS
GTTGATCCGCGTCTTGAAAT+GGG 0.407371 5_2:-3518870 Msa0750090:CDS
TGGGCGTTGGTGGTCAGAAT+TGG 0.414377 5_2:-3518851 Msa0750090:CDS
TTAAGAGGTGAAGGTGAAGA+AGG 0.415332 5_2:+3519230 None:intergenic
ATTAGGGTAAAGACCCATTT+GGG 0.415903 5_2:-3519269 Msa0750090:CDS
GTACTCTCATTAGCCACTTC+CGG 0.418314 5_2:+3515538 None:intergenic
ATGCTTCTCTAGGATGATCT+AGG 0.420612 5_2:+3515106 None:intergenic
ATATTTCAACATTACTGGTC+GGG 0.426560 5_2:-3518297 Msa0750090:CDS
CGCAAATGCTGCCGCAGCCA+CGG 0.428719 5_2:+3518331 None:intergenic
TGAATTGTAAAGAACTTAAA+CGG 0.431400 5_2:+3515447 None:intergenic
GAATCGACAACATCTGCTTC+GGG 0.431778 5_2:-3515484 Msa0750090:CDS
ACAACCAATGTTCTTTCAGT+TGG 0.432665 5_2:+3517248 None:intergenic
GATTCGATTGATGCAAATTC+CGG 0.432753 5_2:-3518660 Msa0750090:CDS
TTGTTCCAATCCCTCAAACT+TGG 0.434886 5_2:+3518620 None:intergenic
ACGTGAGTCACATATGAAAT+GGG 0.436440 5_2:+3516611 None:intergenic
GAGTAAAGGGTATCAAGAAA+TGG 0.437128 5_2:+3519518 None:intergenic
CAAGGTGCTGTTGGTGGCAG+TGG 0.437766 5_2:-3519014 Msa0750090:CDS
ATGAAGTGATTCTTCCAATA+GGG 0.438078 5_2:+3519207 None:intergenic
CAAATTGCTGCTGCTGATGT+TGG 0.441947 5_2:+3516456 None:intergenic
TGTTGGTTCACCCAAGTTTG+AGG 0.444572 5_2:-3518631 Msa0750090:CDS
GGTGTTGATGAAAGTGGATT+GGG 0.445623 5_2:-3518759 Msa0750090:CDS
AGCATCAGACCAGGGAGCAC+AGG 0.445794 5_2:+3517924 None:intergenic
ATTCTTCCAATAGGGTTAAG+AGG 0.447622 5_2:+3519215 None:intergenic
ACCAGCAAAAGCGCATGTTT+GGG 0.448689 5_2:-3516689 Msa0750090:CDS
GTTGGTTCACCCAAGTTTGA+GGG 0.449991 5_2:-3518630 Msa0750090:CDS
AAGAGGCAAGCAAGGGGAGG+GGG 0.450881 5_2:-3515321 Msa0750090:three_prime_UTR
AATGCTTGAAAGAGAGTAAA+GGG 0.455379 5_2:+3519505 None:intergenic
TCTTTGAATGTGCTTTCAGC+AGG 0.457800 5_2:+3518191 None:intergenic
TGGTGTTGATGAAAGTGGAT+TGG 0.458084 5_2:-3518760 Msa0750090:CDS
GGTAAGGAATTCTCACATCT+TGG 0.459599 5_2:+3516709 None:intergenic
GCTGCATCACAACTTGCTGC+TGG 0.462022 5_2:-3518546 Msa0750090:CDS
TAGATAGGTTCATACCCAAA+TGG 0.462403 5_2:+3519255 None:intergenic
CGTCTTGAAATGGGCGTTGG+TGG 0.465802 5_2:-3518861 Msa0750090:CDS
TATGATGAATAACATAAAAT+GGG 0.467432 5_2:+3514941 None:intergenic
TAAGAGGTGAAGGTGAAGAA+GGG 0.469413 5_2:+3519231 None:intergenic
TGATTTCTCTCCACCGGAAG+TGG 0.471635 5_2:-3515551 Msa0750090:CDS
AATAGGGTTCTTTGGAAAAG+AGG 0.473814 5_2:+3519076 None:intergenic
ATCTGCCGCGAAGCCGAGTT+AGG 0.473872 5_2:+3518227 None:intergenic
CACAGGCAAAACCACTTTCA+TGG 0.474335 5_2:+3517941 None:intergenic
AAGGAATGAGTTTCTTGCTA+TGG 0.474746 5_2:-3518264 Msa0750090:CDS
GCTACTGCTGCTGCTGAGAG+TGG 0.476207 5_2:-3515779 Msa0750090:CDS
AAGGTGAAGAAGGGGTAGAT+AGG 0.478323 5_2:+3519240 None:intergenic
CACTGGGCACACCATGAAAG+TGG 0.478966 5_2:-3517952 Msa0750090:CDS
AGTGGCAGCCTCACTTCTGC+TGG 0.479574 5_2:-3515869 Msa0750090:CDS
TTTAGCATGTTGTCCTGACC+AGG 0.479663 5_2:-3519309 Msa0750090:CDS
AGGTTATGAAGAACCTGGTC+AGG 0.480573 5_2:+3519296 None:intergenic
CCACCAAAACCTACGGCTAC+TGG 0.483036 5_2:-3519568 Msa0750090:five_prime_UTR
GAGAAGGAAAATGGAGGAGC+AGG 0.484754 5_2:-3516174 Msa0750090:CDS
CTAGAGAAGCATCAAAACTA+AGG 0.485524 5_2:-3515095 Msa0750090:three_prime_UTR
CTGCGCTGGTGGTGGTGAAT+CGG 0.486467 5_2:+3516074 None:intergenic
GGTGAAGCAAAGAGACTGTC+AGG 0.486964 5_2:+3515601 None:intergenic
AAGATGTCAACTTACTTGTC+AGG 0.488252 5_2:+3516552 None:intergenic
TCCGTCTGATTTCTCTCCAC+CGG 0.488582 5_2:-3515557 Msa0750090:CDS
AGGTGCTGCATCTGAGCAGC+AGG 0.492634 5_2:-3515840 Msa0750090:CDS
AGAAAATAGGTACATAATGA+TGG 0.493862 5_2:+3514856 None:intergenic
ATGTACTTGTCGTACGATAC+CGG 0.495797 5_2:+3518513 None:intergenic
ACAAGAGGCAAGCAAGGGGA+GGG 0.496163 5_2:-3515323 Msa0750090:three_prime_UTR
GCAAATTCCGGTGCTGTTGT+TGG 0.496350 5_2:-3518648 Msa0750090:CDS
GAGAAATTTGATTACCAGGA+TGG 0.500480 5_2:+3516369 None:intergenic
TTACCAGGATGGAAATCAAA+AGG 0.503183 5_2:+3516380 None:intergenic
GCTTCACCAACAAAAGCAGC+TGG 0.504326 5_2:-3515586 Msa0750090:CDS
CAAGAGGCAAGCAAGGGGAG+GGG 0.506271 5_2:-3515322 Msa0750090:three_prime_UTR
ACTAACCTGTAAAATCTCCT+TGG 0.506306 5_2:+3515970 None:intergenic
AGATAGGTTCATACCCAAAT+GGG 0.506648 5_2:+3519256 None:intergenic
CATGTCTTTACTTTGCTAGA+GGG 0.506660 5_2:-3518722 Msa0750090:CDS
AATATGACTCTCACTGTCTC+CGG 0.508178 5_2:+3516648 None:intergenic
TCAACATTACTGGTCGGGGC+AGG 0.511014 5_2:-3518292 Msa0750090:CDS
ATAGGGTTCTTTGGAAAAGA+GGG 0.511296 5_2:+3519077 None:intergenic
GGTGGTCAGAATTGGATCTC+TGG 0.511430 5_2:-3518843 Msa0750090:CDS
CTACTGCTGCTGCTGAGAGT+GGG 0.512956 5_2:-3515778 Msa0750090:CDS
TTGTGTGAAATTGCGCGGAT+AGG 0.513544 5_2:-3514798 Msa0750090:three_prime_UTR
TAATCACCATTATTAACCCT+TGG 0.513837 5_2:+3518966 None:intergenic
TGTTCCAATCCCTCAAACTT+GGG 0.514806 5_2:+3518621 None:intergenic
ACATTACCAGAAGGTGATGA+AGG 0.516499 5_2:+3519110 None:intergenic
GAATGTGCTTTCAGCAGGAA+AGG 0.517326 5_2:+3518196 None:intergenic
TGAAGAGTTCATGAGGTTCA+AGG 0.521920 5_2:-3518595 Msa0750090:CDS
TTTCTCAATGAGTCGTCTAA+CGG 0.522774 5_2:-3518903 Msa0750090:CDS
TAACATGGCTATGAAGTTGA+TGG 0.523547 5_2:+3516021 None:intergenic
TTATCTAATTCTTTGTAGTG+TGG 0.525418 5_2:-3519712 Msa0750090:five_prime_UTR
CCATGTCTTTACTTTGCTAG+AGG 0.529183 5_2:-3518723 Msa0750090:CDS
TGCTGCTGGTGGAACATCAC+CGG 0.530369 5_2:-3518532 Msa0750090:CDS
AGAGGAACTGGACTTAGTAA+TGG 0.530744 5_2:-3519152 Msa0750090:CDS
AAGAGGTGAAGGTGAAGAAG+GGG 0.530887 5_2:+3519232 None:intergenic
TGCAATATGTATTGCTTGGT+CGG 0.533943 5_2:+3515029 None:intergenic
CTGGTCGGGGCAGGCCCGAA+AGG 0.534386 5_2:-3518283 Msa0750090:CDS
AACATGGCTATGAAGTTGAT+GGG 0.534397 5_2:+3516022 None:intergenic
CTTCTCAATAAGATATCATG+TGG 0.536105 5_2:+3516191 None:intergenic
TTACTAAGTCCAGTTCCTCT+AGG 0.536989 5_2:+3519155 None:intergenic
AAAACCTACGGCTACTGGTA+AGG 0.538757 5_2:-3519563 Msa0750090:five_prime_UTR
ATGCTCATAATATTCATAAG+AGG 0.539122 5_2:-3518809 Msa0750090:CDS
GGCTGCGGCAGCATTTGCGA+TGG 0.539812 5_2:-3518327 Msa0750090:CDS
AAGGATGTTGCAAAGTCTGA+AGG 0.540390 5_2:-3515749 Msa0750090:CDS
TATTTCAACATTACTGGTCG+GGG 0.542341 5_2:-3518296 Msa0750090:CDS
ATTTCCAACTGAAAGAACAT+TGG 0.542751 5_2:-3517252 Msa0750090:CDS
GCATCACAACTTGCTGCTGG+TGG 0.543311 5_2:-3518543 Msa0750090:CDS
CATAGCCATGTTAACCATGC+AGG 0.544634 5_2:-3516011 Msa0750090:CDS
TTCTGGGGACAAGCCTAACT+CGG 0.544864 5_2:-3518240 Msa0750090:CDS
TGATTGATGATTGATGATGA+TGG 0.545525 5_2:+3515069 None:intergenic
AAATGCTTGAAAGAGAGTAA+AGG 0.549806 5_2:+3519504 None:intergenic
CACCAGCGCAGTCTCTCTGT+TGG 0.552012 5_2:-3516062 Msa0750090:CDS
AGCAATACATATTGCATACA+TGG 0.552154 5_2:-3515022 Msa0750090:three_prime_UTR
ACATTTCAGAGCCGTGGCTG+CGG 0.553398 5_2:-3518342 Msa0750090:intron
ATCTGCTTCGGGTGACAACA+TGG 0.554785 5_2:-3515473 Msa0750090:CDS
TTGTTGACTCTACAGAAATG+TGG 0.554888 5_2:-3515635 Msa0750090:intron
TGCTCAGCAGCATCAAAGAA+TGG 0.555393 5_2:-3518571 Msa0750090:CDS
AAGTCCTTGAACTCCAAGAA+AGG 0.556107 5_2:-3516136 Msa0750090:CDS
GAAGGCGTAGATCTCGGCAT+GGG 0.556601 5_2:-3515731 Msa0750090:CDS
AAGTCTGAAGGCGTAGATCT+CGG 0.557200 5_2:-3515737 Msa0750090:CDS
CACATGATATCTTATTGAGA+AGG 0.557830 5_2:-3516190 Msa0750090:CDS
CACTGCCACCAACAGCACCT+TGG 0.559329 5_2:+3519015 None:intergenic
AATATTTCAACATTACTGGT+CGG 0.562602 5_2:-3518298 Msa0750090:CDS
TACAAGAGGCAAGCAAGGGG+AGG 0.562749 5_2:-3515324 Msa0750090:three_prime_UTR
ATAACATAAAATGGGAAAGG+AGG 0.563680 5_2:+3514949 None:intergenic
AAAGACCTGCATGGTTAACA+TGG 0.565559 5_2:+3516006 None:intergenic
GGAATTCTCACATCTTGGAC+AGG 0.567021 5_2:+3516714 None:intergenic
GTTTCTTGCTATGGTTTCTG+GGG 0.567026 5_2:-3518255 Msa0750090:CDS
TATGTTACATTTCAGAGCCG+TGG 0.567197 5_2:-3518348 Msa0750090:intron
CAACAGAGAGACTGCGCTGG+TGG 0.569130 5_2:+3516063 None:intergenic
CCAATAGGGTTAAGAGGTGA+AGG 0.570288 5_2:+3519221 None:intergenic
GACTTTAGCAAGAACCACAT+TGG 0.572181 5_2:+3519409 None:intergenic
TACATATTGCATACATGGAT+AGG 0.572521 5_2:-3515017 Msa0750090:three_prime_UTR
TGAATAACATAAAATGGGAA+AGG 0.574733 5_2:+3514946 None:intergenic
CAAATATTCTCTTTAAAGCG+TGG 0.575174 5_2:+3517995 None:intergenic
GAGAATATCCAAGGTGCTGT+TGG 0.575381 5_2:-3519023 Msa0750090:CDS
TTAGACGACTCATTGAGAAA+AGG 0.576395 5_2:+3518906 None:intergenic
AAAATACAAGAGGCAAGCAA+GGG 0.581659 5_2:-3515328 Msa0750090:three_prime_UTR
CACTGTCTCCGGAAAGACAA+AGG 0.581924 5_2:+3516659 None:intergenic
TGTGAAACCCTACAAGGAGA+AGG 0.583303 5_2:-3516583 Msa0750090:CDS
TCCTTGAACTCCAAGAAAGG+AGG 0.583568 5_2:-3516133 Msa0750090:CDS
CCGCGTCTTGAAATGGGCGT+TGG 0.584382 5_2:-3518864 Msa0750090:CDS
ATGTCTTATGAGAATATCCA+AGG 0.586654 5_2:-3519032 Msa0750090:CDS
CTTTCCATTGCAGGCTACAG+TGG 0.586758 5_2:-3515887 Msa0750090:intron
CTTTCTCCTGATAACATCCA+AGG 0.587933 5_2:-3515987 Msa0750090:CDS
CAGAGAGACTGCGCTGGTGG+TGG 0.594991 5_2:+3516066 None:intergenic
GTTGGTGGCAGTGGTGCTGG+TGG 0.595287 5_2:-3519005 Msa0750090:CDS
ACAAGCCTAACTCGGCTTCG+CGG 0.597420 5_2:-3518232 Msa0750090:CDS
GCTGCGGCAGCATTTGCGAT+GGG 0.597928 5_2:-3518326 Msa0750090:CDS
AAGCAAAGAGACTGTCAGGA+AGG 0.599815 5_2:+3515605 None:intergenic
TCTTTAGAGTCAAACGCAGA+GGG 0.601397 5_2:+3516404 None:intergenic
TAGCAAGGTTATGAAGAACC+TGG 0.603647 5_2:+3519291 None:intergenic
GTGAGAGTCATATTATCGAA+AGG 0.603657 5_2:-3516639 Msa0750090:CDS
GGGTCTTTACCCTAATAGCA+AGG 0.608257 5_2:+3519276 None:intergenic
GGGTGAACCAACAACAGCAC+CGG 0.609002 5_2:+3518641 None:intergenic
TCAGCAGCAGCAATTTGAGA+GGG 0.609147 5_2:-3516450 Msa0750090:CDS
CCTCTAGCAAAGTAAAGACA+TGG 0.612058 5_2:+3518723 None:intergenic
GTGAAACCCTACAAGGAGAA+GGG 0.615151 5_2:-3516582 Msa0750090:CDS
CATTACCAGAAGGTGATGAA+GGG 0.615959 5_2:+3519111 None:intergenic
AGCAGCACAGTGATAATCAA+AGG 0.615972 5_2:-3518476 Msa0750090:intron
TGTATGCAATATGTATTGCT+TGG 0.617673 5_2:+3515025 None:intergenic
CTCTCATTAGCCACTTCCGG+TGG 0.619392 5_2:+3515541 None:intergenic
AGCAAAGAGACTGTCAGGAA+GGG 0.620621 5_2:+3515606 None:intergenic
AATTGGATCTCTGGTAACAA+TGG 0.622958 5_2:-3518834 Msa0750090:CDS
AGATCTTGTGTGAAATTGCG+CGG 0.623399 5_2:-3514803 Msa0750090:three_prime_UTR
ATCAGCAGCAGCAATTTGAG+AGG 0.624147 5_2:-3516451 Msa0750090:CDS
TGTGCTTGTGAAACCCTACA+AGG 0.627297 5_2:-3516589 Msa0750090:CDS
TGTATAGCCACCAAAACCTA+CGG 0.627885 5_2:-3519575 Msa0750090:five_prime_UTR
TCCGGTGGAGAGAAATCAGA+CGG 0.628112 5_2:+3515556 None:intergenic
GTAGCAGCATCAATGCAAGA+TGG 0.631513 5_2:+3515797 None:intergenic
CACCAACAGAGAGACTGCGC+TGG 0.632218 5_2:+3516060 None:intergenic
CTAAAGAACCAGCAGAAGTG+AGG 0.639544 5_2:+3515861 None:intergenic
AACAACATGAAGAGTTCATG+AGG 0.641597 5_2:-3518602 Msa0750090:CDS
TTCTTTAGAGTCAAACGCAG+AGG 0.643087 5_2:+3516403 None:intergenic
AATATCCAAGGTGCTGTTGG+TGG 0.644306 5_2:-3519020 Msa0750090:CDS
TGAAGGCGTAGATCTCGGCA+TGG 0.644522 5_2:-3515732 Msa0750090:CDS
CTTATTGAGAAGGAAAATGG+AGG 0.653298 5_2:-3516180 Msa0750090:CDS
ACATGGCTATGAAGTTGATG+GGG 0.654909 5_2:+3516023 None:intergenic
TTCTTATGAAGCAACCAATG+TGG 0.670186 5_2:-3519423 Msa0750090:CDS
AAGGCGTAGATCTCGGCATG+GGG 0.671195 5_2:-3515730 Msa0750090:intron
TCAGCAGCATCAAAGAATGG+TGG 0.671588 5_2:-3518568 Msa0750090:CDS
AAGGGGAGAATCCAAATACA+CGG 0.675208 5_2:-3517282 Msa0750090:CDS
CGTGAGTCACATATGAAATG+GGG 0.678147 5_2:+3516612 None:intergenic
AAATACAAGAGGCAAGCAAG+GGG 0.680528 5_2:-3515327 Msa0750090:three_prime_UTR
AACGCAGAGGGACTTAAACA+TGG 0.682483 5_2:+3516416 None:intergenic
CCAACGCCCATTTCAAGACG+CGG 0.684511 5_2:+3518864 None:intergenic
CAGCAGCAGCAATTTGAGAG+GGG 0.685988 5_2:-3516449 Msa0750090:CDS
TATCAGGAGAAAGACCTGCA+TGG 0.700183 5_2:+3515997 None:intergenic
TGTGACCAAACATTACCAGA+AGG 0.700366 5_2:+3519101 None:intergenic
CATACCTTACCAGTAGCCGT+AGG 0.703434 5_2:+3519559 None:intergenic
GGTGTGCCCAGTGAAAATCG+TGG 0.781448 5_2:+3517962 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGTTTTAATATTATGTA+TGG - chr5_2:3516189-3516208 Msa0750090:CDS 10.0%
!!! TATTTATGTATTTATTTCTT+AGG - chr5_2:3519170-3519189 Msa0750090:CDS 10.0%
!! TTGTTAATGTTATTCTTATT+TGG - chr5_2:3517163-3517182 Msa0750090:intron 15.0%
!!! ATTACGATTTTATGAATAAT+AGG - chr5_2:3517486-3517505 Msa0750090:intron 15.0%
!! GATCGTATTTATATTTATAT+CGG - chr5_2:3518880-3518899 Msa0750090:CDS 15.0%
!! TATGATGAATAACATAAAAT+GGG + chr5_2:3519623-3519642 None:intergenic 15.0%
!!! AAGATTTGATTTTTCACTAA+TGG - chr5_2:3515114-3515133 Msa0750090:three_prime_UTR 20.0%
!!! AGATTTGATTTTTCACTAAT+GGG - chr5_2:3515115-3515134 Msa0750090:three_prime_UTR 20.0%
!! ATATTCTCATAAGACATTAA+AGG + chr5_2:3515526-3515545 None:intergenic 20.0%
!!! AAAGGTATATTTCTTATAGA+TGG - chr5_2:3516103-3516122 Msa0750090:CDS 20.0%
!! AAGGTATATTTCTTATAGAT+GGG - chr5_2:3516104-3516123 Msa0750090:CDS 20.0%
!! TTAAATTGCATAATGATGAA+GGG + chr5_2:3516793-3516812 None:intergenic 20.0%
!!! AAATGAATATTGATTTGTCA+AGG - chr5_2:3517260-3517279 Msa0750090:CDS 20.0%
!!! AATGAATATTGATTTGTCAA+GGG - chr5_2:3517261-3517280 Msa0750090:CDS 20.0%
!!! AATTTTTTGTACCTATCATT+AGG - chr5_2:3517645-3517664 Msa0750090:intron 20.0%
!!! TTGTTATTTTGAAGCAAATT+TGG - chr5_2:3517823-3517842 Msa0750090:intron 20.0%
!! TGAATTGTAAAGAACTTAAA+CGG + chr5_2:3519117-3519136 None:intergenic 20.0%
!!! TTTAAGTTCTTTACAATTCA+AGG - chr5_2:3519117-3519136 Msa0750090:CDS 20.0%
!! CTATGATGAATAACATAAAA+TGG + chr5_2:3519624-3519643 None:intergenic 20.0%
! TTATCTAATTCTTTGTAGTG+TGG - chr5_2:3514849-3514868 Msa0750090:three_prime_UTR 25.0%
!!! TGATTTTTGAAGCATTTTCA+GGG + chr5_2:3515189-3515208 None:intergenic 25.0%
!!! ATGATTTTTGAAGCATTTTC+AGG + chr5_2:3515190-3515209 None:intergenic 25.0%
! TGAAAATGCTTCAAAAATCA+TGG - chr5_2:3515189-3515208 Msa0750090:intron 25.0%
! GAAAATGCTTCAAAAATCAT+GGG - chr5_2:3515190-3515209 Msa0750090:intron 25.0%
!!! AGATTTTGAAAAAGGGTTAT+TGG + chr5_2:3515383-3515402 None:intergenic 25.0%
!!! TAGGAGAAGATTTTGAAAAA+GGG + chr5_2:3515390-3515409 None:intergenic 25.0%
! GATTAAACTTTGGACTAATA+GGG + chr5_2:3515504-3515523 None:intergenic 25.0%
! GACATTAAAGGATTAAACTT+TGG + chr5_2:3515514-3515533 None:intergenic 25.0%
! ATGCTCATAATATTCATAAG+AGG - chr5_2:3515752-3515771 Msa0750090:CDS 25.0%
! AAGTAAACAACAAACTAAAG+AGG + chr5_2:3516135-3516154 None:intergenic 25.0%
! GAAGAATATTTCAACATTAC+TGG - chr5_2:3516259-3516278 Msa0750090:intron 25.0%
! AATATTTCAACATTACTGGT+CGG - chr5_2:3516263-3516282 Msa0750090:intron 25.0%
! ATTCAAAGATGAAGATGTTT+CGG - chr5_2:3516384-3516403 Msa0750090:CDS 25.0%
! TATATCACCTTATCATAGAT+AGG - chr5_2:3516470-3516489 Msa0750090:intron 25.0%
! ATATTGCCATTAATTATTCC+AGG - chr5_2:3516541-3516560 Msa0750090:intron 25.0%
! AAAAGACACATTACTTAGTT+AGG + chr5_2:3516719-3516738 None:intergenic 25.0%
!! TTGAGTTTGCTTGATAATTA+AGG - chr5_2:3516755-3516774 Msa0750090:intron 25.0%
!! TGAGTTTGCTTGATAATTAA+GGG - chr5_2:3516756-3516775 Msa0750090:intron 25.0%
! CTTAAATTGCATAATGATGA+AGG + chr5_2:3516794-3516813 None:intergenic 25.0%
!! TGTAACGTTCTTTTTGTATT+AGG - chr5_2:3516882-3516901 Msa0750090:intron 25.0%
!!! ATGAATATTGATTTGTCAAG+GGG - chr5_2:3517262-3517281 Msa0750090:CDS 25.0%
!! AAATAGATTTTCCGTGTATT+TGG + chr5_2:3517293-3517312 None:intergenic 25.0%
! TACTTCATTTGTAACTAACA+TGG + chr5_2:3517374-3517393 None:intergenic 25.0%
!! CGATTTTATGAATAATAGGA+TGG - chr5_2:3517490-3517509 Msa0750090:intron 25.0%
!! TTTAAAATGTTACCTTCTGA+GGG + chr5_2:3517550-3517569 None:intergenic 25.0%
! TATTCCCGAATTGATATTAT+TGG - chr5_2:3518058-3518077 Msa0750090:intron 25.0%
! ATTCCCGAATTGATATTATT+GGG - chr5_2:3518059-3518078 Msa0750090:intron 25.0%
! TAGTCCCAATAATATCAATT+CGG + chr5_2:3518066-3518085 None:intergenic 25.0%
! AGAGGAAAAAGGAAAATTTA+TGG + chr5_2:3518274-3518293 None:intergenic 25.0%
! TATCTTATTGAGAAGGAAAA+TGG - chr5_2:3518378-3518397 Msa0750090:intron 25.0%
!!! CATCTAAGATTTTGAATTGT+AGG - chr5_2:3519205-3519224 Msa0750090:CDS 25.0%
! GTAGGTAATAAAAATACAAG+AGG - chr5_2:3519223-3519242 Msa0750090:CDS 25.0%
! AAGGATAAATGAGTGAAAAA+AGG + chr5_2:3519299-3519318 None:intergenic 25.0%
!!! ACATTTATTTTCACCTGTAA+AGG + chr5_2:3519318-3519337 None:intergenic 25.0%
! TGAATAACATAAAATGGGAA+AGG + chr5_2:3519618-3519637 None:intergenic 25.0%
!!! AATAATTTGTTGTCTCAGAT+TGG + chr5_2:3519659-3519678 None:intergenic 25.0%
! AGAAAATAGGTACATAATGA+TGG + chr5_2:3519708-3519727 None:intergenic 25.0%
! AGACAAAAGCAAAAGAAAAT+AGG + chr5_2:3519721-3519740 None:intergenic 25.0%
AATGCTTGAAAGAGAGTAAA+GGG + chr5_2:3515059-3515078 None:intergenic 30.0%
AAATGCTTGAAAGAGAGTAA+AGG + chr5_2:3515060-3515079 None:intergenic 30.0%
GAACAAGTTCATATTCTTCA+AGG + chr5_2:3515231-3515250 None:intergenic 30.0%
!! TTCTTCATAACCTTGCTATT+AGG - chr5_2:3515275-3515294 Msa0750090:intron 30.0%
!! TCTTCATAACCTTGCTATTA+GGG - chr5_2:3515276-3515295 Msa0750090:intron 30.0%
ATGAAGTGATTCTTCCAATA+GGG + chr5_2:3515357-3515376 None:intergenic 30.0%
!! CTAGGAGAAGATTTTGAAAA+AGG + chr5_2:3515391-3515410 None:intergenic 30.0%
! TTTTCAAAATCTTCTCCTAG+AGG - chr5_2:3515391-3515410 Msa0750090:intron 30.0%
!!! GTAATGGTTTTGACTTCAAT+AGG - chr5_2:3515425-3515444 Msa0750090:intron 30.0%
GGATTAAACTTTGGACTAAT+AGG + chr5_2:3515505-3515524 None:intergenic 30.0%
ATGTCTTATGAGAATATCCA+AGG - chr5_2:3515529-3515548 Msa0750090:CDS 30.0%
! TTTTCACCAAGGGTTAATAA+TGG - chr5_2:3515589-3515608 Msa0750090:CDS 30.0%
TAATCACCATTATTAACCCT+TGG + chr5_2:3515598-3515617 None:intergenic 30.0%
! TCCAATTGTAAGTTTGTTCA+TGG - chr5_2:3515877-3515896 Msa0750090:CDS 30.0%
ACCATGAACAAACTTACAAT+TGG + chr5_2:3515881-3515900 None:intergenic 30.0%
ATATTTCAACATTACTGGTC+GGG - chr5_2:3516264-3516283 Msa0750090:intron 30.0%
CGAATAACCTATCTATGATA+AGG + chr5_2:3516480-3516499 None:intergenic 30.0%
!! CAAATATTCTCTTTAAAGCG+TGG + chr5_2:3516569-3516588 None:intergenic 30.0%
!! CGCTTTAAAGAGAATATTTG+CGG - chr5_2:3516569-3516588 Msa0750090:CDS 30.0%
! TAATTTTCCACGATTTTCAC+TGG - chr5_2:3516592-3516611 Msa0750090:CDS 30.0%
! AATTTTCCACGATTTTCACT+GGG - chr5_2:3516593-3516612 Msa0750090:CDS 30.0%
AAACTCAAATCAATCAAGGA+TGG + chr5_2:3516743-3516762 None:intergenic 30.0%
AAGCAAACTCAAATCAATCA+AGG + chr5_2:3516747-3516766 None:intergenic 30.0%
! GATAATTAAGGGTTTTCAAC+TGG - chr5_2:3516767-3516786 Msa0750090:intron 30.0%
AATTTAAGCTCAGTAATCAC+TGG - chr5_2:3516806-3516825 Msa0750090:intron 30.0%
AGAACGTTACACATAAAACA+CGG + chr5_2:3516873-3516892 None:intergenic 30.0%
GACTTCTAAACTATGTTAAC+AGG + chr5_2:3517229-3517248 None:intergenic 30.0%
ATTTCCAACTGAAAGAACAT+TGG - chr5_2:3517309-3517328 Msa0750090:intron 30.0%
TGTGTTTATTTGTGAACCAT+AGG - chr5_2:3517516-3517535 Msa0750090:intron 30.0%
GTGTTTATTTGTGAACCATA+GGG - chr5_2:3517517-3517536 Msa0750090:intron 30.0%
!! CTTTAAAATGTTACCTTCTG+AGG + chr5_2:3517551-3517570 None:intergenic 30.0%
! CTCAGAAGGTAACATTTTAA+AGG - chr5_2:3517549-3517568 Msa0750090:intron 30.0%
ATAACTATTAAGCGTTCTTG+CGG - chr5_2:3517591-3517610 Msa0750090:intron 30.0%
TTGTTCATTTATGTGTCAGA+AGG + chr5_2:3517627-3517646 None:intergenic 30.0%
! TTTTGTACCTATCATTAGGT+AGG - chr5_2:3517649-3517668 Msa0750090:intron 30.0%
TTAGGTAGGTTCTTACTTAT+AGG - chr5_2:3517663-3517682 Msa0750090:intron 30.0%
TCTTATTGCATCTTTACAGA+AGG - chr5_2:3517776-3517795 Msa0750090:intron 30.0%
AGTCCCAATAATATCAATTC+GGG + chr5_2:3518065-3518084 None:intergenic 30.0%
CTTCTCAATAAGATATCATG+TGG + chr5_2:3518373-3518392 None:intergenic 30.0%
CACATGATATCTTATTGAGA+AGG - chr5_2:3518371-3518390 Msa0750090:intron 30.0%
ATCGGATTATTCTTGAAATC+TGG + chr5_2:3518472-3518491 None:intergenic 30.0%
! TCTTTACAATTCAAGGTACT+TGG - chr5_2:3519124-3519143 Msa0750090:CDS 30.0%
TTCACTCATTTATCCTTTAC+AGG - chr5_2:3519302-3519321 Msa0750090:CDS 30.0%
!! TGATTGATGATTGATGATGA+TGG + chr5_2:3519495-3519514 None:intergenic 30.0%
TGTATGCAATATGTATTGCT+TGG + chr5_2:3519539-3519558 None:intergenic 30.0%
AGCAATACATATTGCATACA+TGG - chr5_2:3519539-3519558 Msa0750090:five_prime_UTR 30.0%
TACATATTGCATACATGGAT+AGG - chr5_2:3519544-3519563 Msa0750090:five_prime_UTR 30.0%
ATAACATAAAATGGGAAAGG+AGG + chr5_2:3519615-3519634 None:intergenic 30.0%
!! GAGTAAAGGGTATCAAGAAA+TGG + chr5_2:3515046-3515065 None:intergenic 35.0%
TTCTTATGAAGCAACCAATG+TGG - chr5_2:3515138-3515157 Msa0750090:three_prime_UTR 35.0%
TATTAGGGTAAAGACCCATT+TGG - chr5_2:3515291-3515310 Msa0750090:intron 35.0%
ATTAGGGTAAAGACCCATTT+GGG - chr5_2:3515292-3515311 Msa0750090:intron 35.0%
AGATAGGTTCATACCCAAAT+GGG + chr5_2:3515308-3515327 None:intergenic 35.0%
TAGATAGGTTCATACCCAAA+TGG + chr5_2:3515309-3515328 None:intergenic 35.0%
ATTCTTCCAATAGGGTTAAG+AGG + chr5_2:3515349-3515368 None:intergenic 35.0%
GATGAAGTGATTCTTCCAAT+AGG + chr5_2:3515358-3515377 None:intergenic 35.0%
! ATAGGGTTCTTTGGAAAAGA+GGG + chr5_2:3515487-3515506 None:intergenic 35.0%
! AATAGGGTTCTTTGGAAAAG+AGG + chr5_2:3515488-3515507 None:intergenic 35.0%
TTTGGACTAATAGGGTTCTT+TGG + chr5_2:3515496-3515515 None:intergenic 35.0%
!!! TTCTTGTGCTTTTTCACCAA+GGG - chr5_2:3515579-3515598 Msa0750090:CDS 35.0%
TTAGACGACTCATTGAGAAA+AGG + chr5_2:3515658-3515677 None:intergenic 35.0%
TTTCTCAATGAGTCGTCTAA+CGG - chr5_2:3515658-3515677 Msa0750090:intron 35.0%
AATTGGATCTCTGGTAACAA+TGG - chr5_2:3515727-3515746 Msa0750090:intron 35.0%
!! TCTGCAAATGATGCTAGTTT+TGG - chr5_2:3515781-3515800 Msa0750090:CDS 35.0%
!!! AGTTTTGGTGTTGATGAAAG+TGG - chr5_2:3515796-3515815 Msa0750090:CDS 35.0%
CATGTCTTTACTTTGCTAGA+GGG - chr5_2:3515839-3515858 Msa0750090:CDS 35.0%
!! GCTAGAGGGTTTTGTAAAAA+TGG - chr5_2:3515853-3515872 Msa0750090:CDS 35.0%
GATTCGATTGATGCAAATTC+CGG - chr5_2:3515901-3515920 Msa0750090:intron 35.0%
AACAACATGAAGAGTTCATG+AGG - chr5_2:3515959-3515978 Msa0750090:intron 35.0%
TATTTCAACATTACTGGTCG+GGG - chr5_2:3516265-3516284 Msa0750090:intron 35.0%
AGCAAGAAACTCATTCCTTT+CGG + chr5_2:3516296-3516315 None:intergenic 35.0%
AAGGAATGAGTTTCTTGCTA+TGG - chr5_2:3516297-3516316 Msa0750090:intron 35.0%
! AGTTTCTTGCTATGGTTTCT+GGG - chr5_2:3516305-3516324 Msa0750090:intron 35.0%
TTATTCGCGCATACATGAAA+TGG - chr5_2:3516493-3516512 Msa0750090:intron 35.0%
GTGGAACCTGGAATAATTAA+TGG + chr5_2:3516550-3516569 None:intergenic 35.0%
TCAAAAATCCATCTTCCCTA+GGG + chr5_2:3516672-3516691 None:intergenic 35.0%
ATCAAAAATCCATCTTCCCT+AGG + chr5_2:3516673-3516692 None:intergenic 35.0%
ACATTACTTAGTTAGGAGTC+AGG + chr5_2:3516712-3516731 None:intergenic 35.0%
! GGTTTATCCTGTACATTTTC+AGG - chr5_2:3516950-3516969 Msa0750090:intron 35.0%
AGTGATACCTGAAAATGTAC+AGG + chr5_2:3516960-3516979 None:intergenic 35.0%
ACAACCAATGTTCTTTCAGT+TGG + chr5_2:3517316-3517335 None:intergenic 35.0%
AAGTTCATGTACTACTAGCA+TGG + chr5_2:3517399-3517418 None:intergenic 35.0%
GTAAGAACCTACCTAATGAT+AGG + chr5_2:3517659-3517678 None:intergenic 35.0%
GTTATTGCAATCATGACATC+TGG - chr5_2:3517688-3517707 Msa0750090:intron 35.0%
! ACTTTTACAGACAGACACTA+CGG + chr5_2:3517756-3517775 None:intergenic 35.0%
GTGAGAGTCATATTATCGAA+AGG - chr5_2:3517922-3517941 Msa0750090:intron 35.0%
ACGTGAGTCACATATGAAAT+GGG + chr5_2:3517953-3517972 None:intergenic 35.0%
AAGATGTCAACTTACTTGTC+AGG + chr5_2:3518012-3518031 None:intergenic 35.0%
TTGGGACTAATCATGTATAC+AGG - chr5_2:3518077-3518096 Msa0750090:intron 35.0%
TTACCAGGATGGAAATCAAA+AGG + chr5_2:3518184-3518203 None:intergenic 35.0%
GAGAAATTTGATTACCAGGA+TGG + chr5_2:3518195-3518214 None:intergenic 35.0%
AGGTGAGAAATTTGATTACC+AGG + chr5_2:3518199-3518218 None:intergenic 35.0%
GGTAATCAAATTTCTCACCT+TGG - chr5_2:3518199-3518218 Msa0750090:CDS 35.0%
!! ATGGTTGCTTTAGAGGAAAA+AGG + chr5_2:3518285-3518304 None:intergenic 35.0%
TTCTTGTTCCTGCATGAAAT+AGG + chr5_2:3518339-3518358 None:intergenic 35.0%
CTTATTGAGAAGGAAAATGG+AGG - chr5_2:3518381-3518400 Msa0750090:intron 35.0%
! AACATGGCTATGAAGTTGAT+GGG + chr5_2:3518542-3518561 None:intergenic 35.0%
TAACATGGCTATGAAGTTGA+TGG + chr5_2:3518543-3518562 None:intergenic 35.0%
AAATCTCCTTGGATGTTATC+AGG + chr5_2:3518583-3518602 None:intergenic 35.0%
! AACATCCAAGGAGATTTTAC+AGG - chr5_2:3518586-3518605 Msa0750090:CDS 35.0%
ACTAACCTGTAAAATCTCCT+TGG + chr5_2:3518594-3518613 None:intergenic 35.0%
AGAACTACACCATAGTATAC+AGG + chr5_2:3518617-3518636 None:intergenic 35.0%
GTAAGCTGTTAAAACCATGT+TGG + chr5_2:3518642-3518661 None:intergenic 35.0%
GTTAACATACTTTCCATTGC+AGG - chr5_2:3518665-3518684 Msa0750090:CDS 35.0%
!! TTGTTGACTCTACAGAAATG+TGG - chr5_2:3518926-3518945 Msa0750090:CDS 35.0%
AAAAATACAAGAGGCAAGCA+AGG - chr5_2:3519232-3519251 Msa0750090:CDS 35.0%
AAAATACAAGAGGCAAGCAA+GGG - chr5_2:3519233-3519252 Msa0750090:CDS 35.0%
GAGGGGGATCATATTAATTA+GGG - chr5_2:3519256-3519275 Msa0750090:CDS 35.0%
!!! CTTAGTTTTGATGCTTCTCT+AGG + chr5_2:3519468-3519487 None:intergenic 35.0%
!! CTAGAGAAGCATCAAAACTA+AGG - chr5_2:3519466-3519485 Msa0750090:five_prime_UTR 35.0%
TGCAATATGTATTGCTTGGT+CGG + chr5_2:3519535-3519554 None:intergenic 35.0%
TGTATAGCCACCAAAACCTA+CGG - chr5_2:3514986-3515005 Msa0750090:three_prime_UTR 40.0%
GACTTTAGCAAGAACCACAT+TGG + chr5_2:3515155-3515174 None:intergenic 40.0%
TAGCAAGGTTATGAAGAACC+TGG + chr5_2:3515273-3515292 None:intergenic 40.0%
TAAGAGGTGAAGGTGAAGAA+GGG + chr5_2:3515333-3515352 None:intergenic 40.0%
TTAAGAGGTGAAGGTGAAGA+AGG + chr5_2:3515334-3515353 None:intergenic 40.0%
AAATCTTCTCCTAGAGGAAC+TGG - chr5_2:3515397-3515416 Msa0750090:intron 40.0%
TTACTAAGTCCAGTTCCTCT+AGG + chr5_2:3515409-3515428 None:intergenic 40.0%
AGAGGAACTGGACTTAGTAA+TGG - chr5_2:3515409-3515428 Msa0750090:intron 40.0%
CATTACCAGAAGGTGATGAA+GGG + chr5_2:3515453-3515472 None:intergenic 40.0%
ACATTACCAGAAGGTGATGA+AGG + chr5_2:3515454-3515473 None:intergenic 40.0%
! CATCACCTTCTGGTAATGTT+TGG - chr5_2:3515455-3515474 Msa0750090:exon 40.0%
TGTGACCAAACATTACCAGA+AGG + chr5_2:3515463-3515482 None:intergenic 40.0%
!!! GTTCTTGTGCTTTTTCACCA+AGG - chr5_2:3515578-3515597 Msa0750090:CDS 40.0%
!! TGGTGTTGATGAAAGTGGAT+TGG - chr5_2:3515801-3515820 Msa0750090:CDS 40.0%
!! GGTGTTGATGAAAGTGGATT+GGG - chr5_2:3515802-3515821 Msa0750090:CDS 40.0%
!! GATGAAAGTGGATTGGGATT+TGG - chr5_2:3515808-3515827 Msa0750090:CDS 40.0%
CCTCTAGCAAAGTAAAGACA+TGG + chr5_2:3515841-3515860 None:intergenic 40.0%
CCATGTCTTTACTTTGCTAG+AGG - chr5_2:3515838-3515857 Msa0750090:CDS 40.0%
TGTTCCAATCCCTCAAACTT+GGG + chr5_2:3515943-3515962 None:intergenic 40.0%
TTGTTCCAATCCCTCAAACT+TGG + chr5_2:3515944-3515963 None:intergenic 40.0%
TGAAGAGTTCATGAGGTTCA+AGG - chr5_2:3515966-3515985 Msa0750090:intron 40.0%
ATGTACTTGTCGTACGATAC+CGG + chr5_2:3516051-3516070 None:intergenic 40.0%
AGCAGCACAGTGATAATCAA+AGG - chr5_2:3516085-3516104 Msa0750090:CDS 40.0%
TATGTTACATTTCAGAGCCG+TGG - chr5_2:3516213-3516232 Msa0750090:CDS 40.0%
GCAAGAAACTCATTCCTTTC+GGG + chr5_2:3516295-3516314 None:intergenic 40.0%
! GAGTTTCTTGCTATGGTTTC+TGG - chr5_2:3516304-3516323 Msa0750090:intron 40.0%
! GTTTCTTGCTATGGTTTCTG+GGG - chr5_2:3516306-3516325 Msa0750090:intron 40.0%
TCTTTGAATGTGCTTTCAGC+AGG + chr5_2:3516373-3516392 None:intergenic 40.0%
! AAGATGTTTCGGAGTACTTC+AGG - chr5_2:3516395-3516414 Msa0750090:CDS 40.0%
CATGATATATGTCTCCCATG+AGG - chr5_2:3516922-3516941 Msa0750090:intron 40.0%
AGAATCGTGGACATTTAAGC+AGG + chr5_2:3517194-3517213 None:intergenic 40.0%
AAGGGGAGAATCCAAATACA+CGG - chr5_2:3517279-3517298 Msa0750090:CDS 40.0%
!! TGTTTGTTGTCGTTACCCTA+CGG - chr5_2:3517445-3517464 Msa0750090:intron 40.0%
TTTGTGAACCATAGGGTTTG+TGG - chr5_2:3517524-3517543 Msa0750090:intron 40.0%
GGTAAGGAATTCTCACATCT+TGG + chr5_2:3517855-3517874 None:intergenic 40.0%
GTTTGTCACCTTTGTCTTTC+CGG - chr5_2:3517894-3517913 Msa0750090:intron 40.0%
AATATGACTCTCACTGTCTC+CGG + chr5_2:3517916-3517935 None:intergenic 40.0%
CGTGAGTCACATATGAAATG+GGG + chr5_2:3517952-3517971 None:intergenic 40.0%
CACGTGAGTCACATATGAAA+TGG + chr5_2:3517954-3517973 None:intergenic 40.0%
! ACTTTTCCCTTCTCCTTGTA+GGG + chr5_2:3517988-3518007 None:intergenic 40.0%
! AACTTTTCCCTTCTCCTTGT+AGG + chr5_2:3517989-3518008 None:intergenic 40.0%
!! TCTTTAGAGTCAAACGCAGA+GGG + chr5_2:3518160-3518179 None:intergenic 40.0%
!! TTCTTTAGAGTCAAACGCAG+AGG + chr5_2:3518161-3518180 None:intergenic 40.0%
!!! GAACCTTTTGATTTCCATCC+TGG - chr5_2:3518178-3518197 Msa0750090:CDS 40.0%
CGAGTAGAATAAAGAAGCCA+AGG + chr5_2:3518219-3518238 None:intergenic 40.0%
TCACCAAACCTATTTCATGC+AGG - chr5_2:3518328-3518347 Msa0750090:CDS 40.0%
GTTCCTGCATGAAATAGGTT+TGG + chr5_2:3518334-3518353 None:intergenic 40.0%
AAGTCCTTGAACTCCAAGAA+AGG - chr5_2:3518425-3518444 Msa0750090:intron 40.0%
!! AGTTGATGGGGAAAAACCAA+AGG + chr5_2:3518529-3518548 None:intergenic 40.0%
!! ACATGGCTATGAAGTTGATG+GGG + chr5_2:3518541-3518560 None:intergenic 40.0%
AAAGACCTGCATGGTTAACA+TGG + chr5_2:3518558-3518577 None:intergenic 40.0%
CTTTCTCCTGATAACATCCA+AGG - chr5_2:3518574-3518593 Msa0750090:CDS 40.0%
! CAGGTTAGTCCTGTATACTA+TGG - chr5_2:3518605-3518624 Msa0750090:CDS 40.0%
!! TGGTGTAGTTCTAACCAACA+TGG - chr5_2:3518625-3518644 Msa0750090:CDS 40.0%
TGCTGAGAGTGGGAATTTAA+AGG - chr5_2:3518793-3518812 Msa0750090:CDS 40.0%
AAGGATGTTGCAAAGTCTGA+AGG - chr5_2:3518812-3518831 Msa0750090:CDS 40.0%
!!! TAATCTCCAGCTGCTTTTGT+TGG + chr5_2:3518984-3519003 None:intergenic 40.0%
TGAATCGACAACATCTGCTT+CGG - chr5_2:3519076-3519095 Msa0750090:CDS 40.0%
AAATACAAGAGGCAAGCAAG+GGG - chr5_2:3519234-3519253 Msa0750090:CDS 40.0%
GGAGGGGGATCATATTAATT+AGG - chr5_2:3519255-3519274 Msa0750090:CDS 40.0%
!! ATGCTTCTCTAGGATGATCT+AGG + chr5_2:3519458-3519477 None:intergenic 40.0%
AGATCTTGTGTGAAATTGCG+CGG - chr5_2:3519758-3519777 Msa0750090:five_prime_UTR 40.0%
CTCTCTGACGCTTCAAAGAT+AGG - chr5_2:3514887-3514906 Msa0750090:three_prime_UTR 45.0%
! TTACCAGTAGCCGTAGGTTT+TGG + chr5_2:3514999-3515018 None:intergenic 45.0%
AAAACCTACGGCTACTGGTA+AGG - chr5_2:3514998-3515017 Msa0750090:three_prime_UTR 45.0%
TTTAGCATGTTGTCCTGACC+AGG - chr5_2:3515252-3515271 Msa0750090:intron 45.0%
AGGTTATGAAGAACCTGGTC+AGG + chr5_2:3515268-3515287 None:intergenic 45.0%
GGGTCTTTACCCTAATAGCA+AGG + chr5_2:3515288-3515307 None:intergenic 45.0%
AAGGTGAAGAAGGGGTAGAT+AGG + chr5_2:3515324-3515343 None:intergenic 45.0%
AAGAGGTGAAGGTGAAGAAG+GGG + chr5_2:3515332-3515351 None:intergenic 45.0%
CCAATAGGGTTAAGAGGTGA+AGG + chr5_2:3515343-3515362 None:intergenic 45.0%
CCTTCACCTCTTAACCCTAT+TGG - chr5_2:3515340-3515359 Msa0750090:intron 45.0%
!! GAGAATATCCAAGGTGCTGT+TGG - chr5_2:3515538-3515557 Msa0750090:CDS 45.0%
!! AATATCCAAGGTGCTGTTGG+TGG - chr5_2:3515541-3515560 Msa0750090:CDS 45.0%
GTTGATCCGCGTCTTGAAAT+GGG - chr5_2:3515691-3515710 Msa0750090:intron 45.0%
!! TGTTGGTTCACCCAAGTTTG+AGG - chr5_2:3515930-3515949 Msa0750090:intron 45.0%
! GTTGGTTCACCCAAGTTTGA+GGG - chr5_2:3515931-3515950 Msa0750090:intron 45.0%
TTCACCCAAGTTTGAGGGAT+TGG - chr5_2:3515936-3515955 Msa0750090:intron 45.0%
TGCTCAGCAGCATCAAAGAA+TGG - chr5_2:3515990-3516009 Msa0750090:CDS 45.0%
TCAGCAGCATCAAAGAATGG+TGG - chr5_2:3515993-3516012 Msa0750090:CDS 45.0%
GAATGTGCTTTCAGCAGGAA+AGG + chr5_2:3516368-3516387 None:intergenic 45.0%
!! TCTCTTTAAAGCGTGGAACC+TGG + chr5_2:3516562-3516581 None:intergenic 45.0%
CACAGGCAAAACCACTTTCA+TGG + chr5_2:3516623-3516642 None:intergenic 45.0%
!! TTCCAAGAAGCATCAGACCA+GGG + chr5_2:3516648-3516667 None:intergenic 45.0%
GGATAAACCTGTCTCCTCAT+GGG + chr5_2:3516939-3516958 None:intergenic 45.0%
AGGATAAACCTGTCTCCTCA+TGG + chr5_2:3516940-3516959 None:intergenic 45.0%
GCAATACTATGACTGCCGTA+GGG + chr5_2:3517463-3517482 None:intergenic 45.0%
AGCAATACTATGACTGCCGT+AGG + chr5_2:3517464-3517483 None:intergenic 45.0%
GGAATTCTCACATCTTGGAC+AGG + chr5_2:3517850-3517869 None:intergenic 45.0%
! AACATGCGCTTTTGCTGGTA+AGG + chr5_2:3517871-3517890 None:intergenic 45.0%
! TACCAGCAAAAGCGCATGTT+TGG - chr5_2:3517871-3517890 Msa0750090:intron 45.0%
! ACCAGCAAAAGCGCATGTTT+GGG - chr5_2:3517872-3517891 Msa0750090:intron 45.0%
TGTGCTTGTGAAACCCTACA+AGG - chr5_2:3517972-3517991 Msa0750090:CDS 45.0%
TGTGAAACCCTACAAGGAGA+AGG - chr5_2:3517978-3517997 Msa0750090:CDS 45.0%
GTGAAACCCTACAAGGAGAA+GGG - chr5_2:3517979-3517998 Msa0750090:CDS 45.0%
CAAATTGCTGCTGCTGATGT+TGG + chr5_2:3518108-3518127 None:intergenic 45.0%
ATCAGCAGCAGCAATTTGAG+AGG - chr5_2:3518110-3518129 Msa0750090:intron 45.0%
TCAGCAGCAGCAATTTGAGA+GGG - chr5_2:3518111-3518130 Msa0750090:intron 45.0%
AACGCAGAGGGACTTAAACA+TGG + chr5_2:3518148-3518167 None:intergenic 45.0%
AAAACTGAAGCAGCACGAGA+TGG + chr5_2:3518304-3518323 None:intergenic 45.0%
TCCTTGAACTCCAAGAAAGG+AGG - chr5_2:3518428-3518447 Msa0750090:intron 45.0%
CATAGCCATGTTAACCATGC+AGG - chr5_2:3518550-3518569 Msa0750090:CDS 45.0%
TATCAGGAGAAAGACCTGCA+TGG + chr5_2:3518567-3518586 None:intergenic 45.0%
CTAAAGAACCAGCAGAAGTG+AGG + chr5_2:3518703-3518722 None:intergenic 45.0%
!! CTCACTTCTGCTGGTTCTTT+AGG - chr5_2:3518701-3518720 Msa0750090:CDS 45.0%
GTAGCAGCATCAATGCAAGA+TGG + chr5_2:3518767-3518786 None:intergenic 45.0%
! AAGTCTGAAGGCGTAGATCT+CGG - chr5_2:3518824-3518843 Msa0750090:CDS 45.0%
AGCAAAGAGACTGTCAGGAA+GGG + chr5_2:3518958-3518977 None:intergenic 45.0%
AAGCAAAGAGACTGTCAGGA+AGG + chr5_2:3518959-3518978 None:intergenic 45.0%
GTACTCTCATTAGCCACTTC+CGG + chr5_2:3519026-3519045 None:intergenic 45.0%
GAATCGACAACATCTGCTTC+GGG - chr5_2:3519077-3519096 Msa0750090:CDS 45.0%
TTGTGTGAAATTGCGCGGAT+AGG - chr5_2:3519763-3519782 Msa0750090:five_prime_UTR 45.0%
CATACCTTACCAGTAGCCGT+AGG + chr5_2:3515005-3515024 None:intergenic 50.0%
AGGAACCCTTCATCACCTTC+TGG - chr5_2:3515445-3515464 Msa0750090:exon 50.0%
GTCGTCTAACGGCGATGATT+TGG - chr5_2:3515669-3515688 Msa0750090:intron 50.0%
GGTTGATCCGCGTCTTGAAA+TGG - chr5_2:3515690-3515709 Msa0750090:intron 50.0%
GGTGGTCAGAATTGGATCTC+TGG - chr5_2:3515718-3515737 Msa0750090:intron 50.0%
!! GCAAATTCCGGTGCTGTTGT+TGG - chr5_2:3515913-3515932 Msa0750090:intron 50.0%
! TTCTGGGGACAAGCCTAACT+CGG - chr5_2:3516321-3516340 Msa0750090:intron 50.0%
!! ACGACTTGCTAATGCTGTGC+AGG - chr5_2:3516433-3516452 Msa0750090:CDS 50.0%
!! CTTCCAAGAAGCATCAGACC+AGG + chr5_2:3516649-3516668 None:intergenic 50.0%
TGATGCTTCTTGGAAGCCCT+AGG - chr5_2:3516653-3516672 Msa0750090:CDS 50.0%
GATGCTTCTTGGAAGCCCTA+GGG - chr5_2:3516654-3516673 Msa0750090:CDS 50.0%
GGAGTCAGGATCAACATCAG+AGG + chr5_2:3516698-3516717 None:intergenic 50.0%
TATGTCTCCCATGAGGAGAC+AGG - chr5_2:3516929-3516948 Msa0750090:intron 50.0%
! ACCCAAACATGCGCTTTTGC+TGG + chr5_2:3517876-3517895 None:intergenic 50.0%
CACTGTCTCCGGAAAGACAA+AGG + chr5_2:3517905-3517924 None:intergenic 50.0%
CAGCAGCAGCAATTTGAGAG+GGG - chr5_2:3518112-3518131 Msa0750090:intron 50.0%
! GCACGAGATGGTTGCTTTAG+AGG + chr5_2:3518292-3518311 None:intergenic 50.0%
GAGAAGGAAAATGGAGGAGC+AGG - chr5_2:3518387-3518406 Msa0750090:intron 50.0%
GCCTCCTTTCTTGGAGTTCA+AGG + chr5_2:3518432-3518451 None:intergenic 50.0%
GACTCTTCAGCCTCCTTTCT+TGG + chr5_2:3518441-3518460 None:intergenic 50.0%
! TCTCTCTGTTGGTGCTCCTT+TGG - chr5_2:3518510-3518529 Msa0750090:CDS 50.0%
CTTTCCATTGCAGGCTACAG+TGG - chr5_2:3518674-3518693 Msa0750090:CDS 50.0%
GGTGAAGCAAAGAGACTGTC+AGG + chr5_2:3518963-3518982 None:intergenic 50.0%
GCTTCACCAACAAAAGCAGC+TGG - chr5_2:3518975-3518994 Msa0750090:CDS 50.0%
TCCGTCTGATTTCTCTCCAC+CGG - chr5_2:3519004-3519023 Msa0750090:CDS 50.0%
TCCGGTGGAGAGAAATCAGA+CGG + chr5_2:3519008-3519027 None:intergenic 50.0%
TGATTTCTCTCCACCGGAAG+TGG - chr5_2:3519010-3519029 Msa0750090:CDS 50.0%
ATCTGCTTCGGGTGACAACA+TGG - chr5_2:3519088-3519107 Msa0750090:CDS 50.0%
!! CCAGTAGCCGTAGGTTTTGG+TGG + chr5_2:3514996-3515015 None:intergenic 55.0%
CCACCAAAACCTACGGCTAC+TGG - chr5_2:3514993-3515012 Msa0750090:three_prime_UTR 55.0%
CCAACGCCCATTTCAAGACG+CGG + chr5_2:3515700-3515719 None:intergenic 55.0%
!! CGTCTTGAAATGGGCGTTGG+TGG - chr5_2:3515700-3515719 Msa0750090:intron 55.0%
!! TGGGCGTTGGTGGTCAGAAT+TGG - chr5_2:3515710-3515729 Msa0750090:intron 55.0%
GGGTGAACCAACAACAGCAC+CGG + chr5_2:3515923-3515942 None:intergenic 55.0%
!! GCTGCATCACAACTTGCTGC+TGG - chr5_2:3516015-3516034 Msa0750090:CDS 55.0%
!! GCATCACAACTTGCTGCTGG+TGG - chr5_2:3516018-3516037 Msa0750090:CDS 55.0%
TGCTGCTGGTGGAACATCAC+CGG - chr5_2:3516029-3516048 Msa0750090:CDS 55.0%
ACATTTCAGAGCCGTGGCTG+CGG - chr5_2:3516219-3516238 Msa0750090:intron 55.0%
TCAACATTACTGGTCGGGGC+AGG - chr5_2:3516269-3516288 Msa0750090:intron 55.0%
ACAAGCCTAACTCGGCTTCG+CGG - chr5_2:3516329-3516348 Msa0750090:intron 55.0%
GGTGTGCCCAGTGAAAATCG+TGG + chr5_2:3516602-3516621 None:intergenic 55.0%
CACTGGGCACACCATGAAAG+TGG - chr5_2:3516609-3516628 Msa0750090:CDS 55.0%
CTCCCTGGTCTGATGCTTCT+TGG - chr5_2:3516643-3516662 Msa0750090:CDS 55.0%
CTTGGAAGCCCTAGGGAAGA+TGG - chr5_2:3516661-3516680 Msa0750090:CDS 55.0%
GATGTGCACGTGCAGAATCG+TGG + chr5_2:3517207-3517226 None:intergenic 55.0%
TCTGAGGGCCACAAACCCTA+TGG + chr5_2:3517535-3517554 None:intergenic 55.0%
TAGGGTTTGTGGCCCTCAGA+AGG - chr5_2:3517535-3517554 Msa0750090:intron 55.0%
CTACTGCTGCTGCTGAGAGT+GGG - chr5_2:3518783-3518802 Msa0750090:CDS 55.0%
! TGAAGGCGTAGATCTCGGCA+TGG - chr5_2:3518829-3518848 Msa0750090:CDS 55.0%
! GAAGGCGTAGATCTCGGCAT+GGG - chr5_2:3518830-3518849 Msa0750090:CDS 55.0%
AAGGCGTAGATCTCGGCATG+GGG - chr5_2:3518831-3518850 Msa0750090:CDS 55.0%
CTCTCATTAGCCACTTCCGG+TGG + chr5_2:3519023-3519042 None:intergenic 55.0%
TACAAGAGGCAAGCAAGGGG+AGG - chr5_2:3519237-3519256 Msa0750090:CDS 55.0%
ACAAGAGGCAAGCAAGGGGA+GGG - chr5_2:3519238-3519257 Msa0750090:CDS 55.0%
CACTGCCACCAACAGCACCT+TGG + chr5_2:3515549-3515568 None:intergenic 60.0%
!! CAAGGTGCTGTTGGTGGCAG+TGG - chr5_2:3515547-3515566 Msa0750090:CDS 60.0%
CCGCGTCTTGAAATGGGCGT+TGG - chr5_2:3515697-3515716 Msa0750090:intron 60.0%
GCTGCGGCAGCATTTGCGAT+GGG - chr5_2:3516235-3516254 Msa0750090:intron 60.0%
ATCTGCCGCGAAGCCGAGTT+AGG + chr5_2:3516337-3516356 None:intergenic 60.0%
!! GTGGTTTTGCCTGTGCTCCC+TGG - chr5_2:3516628-3516647 Msa0750090:CDS 60.0%
! AGCATCAGACCAGGGAGCAC+AGG + chr5_2:3516640-3516659 None:intergenic 60.0%
!! CTGCGCTGGTGGTGGTGAAT+CGG + chr5_2:3518490-3518509 None:intergenic 60.0%
CAACAGAGAGACTGCGCTGG+TGG + chr5_2:3518501-3518520 None:intergenic 60.0%
CACCAGCGCAGTCTCTCTGT+TGG - chr5_2:3518499-3518518 Msa0750090:CDS 60.0%
CACCAACAGAGAGACTGCGC+TGG + chr5_2:3518504-3518523 None:intergenic 60.0%
GCTGCCACTGTAGCCTGCAA+TGG + chr5_2:3518681-3518700 None:intergenic 60.0%
AGTGGCAGCCTCACTTCTGC+TGG - chr5_2:3518692-3518711 Msa0750090:CDS 60.0%
! AGGTGCTGCATCTGAGCAGC+AGG - chr5_2:3518721-3518740 Msa0750090:CDS 60.0%
GCTACTGCTGCTGCTGAGAG+TGG - chr5_2:3518782-3518801 Msa0750090:CDS 60.0%
CAAGAGGCAAGCAAGGGGAG+GGG - chr5_2:3519239-3519258 Msa0750090:CDS 60.0%
AAGAGGCAAGCAAGGGGAGG+GGG - chr5_2:3519240-3519259 Msa0750090:CDS 60.0%
!! GCTGTTGGTGGCAGTGGTGC+TGG - chr5_2:3515553-3515572 Msa0750090:CDS 65.0%
!! GTTGGTGGCAGTGGTGCTGG+TGG - chr5_2:3515556-3515575 Msa0750090:CDS 65.0%
CGCAAATGCTGCCGCAGCCA+CGG + chr5_2:3516233-3516252 None:intergenic 65.0%
GGCTGCGGCAGCATTTGCGA+TGG - chr5_2:3516234-3516253 Msa0750090:intron 65.0%
! CAGAGAGACTGCGCTGGTGG+TGG + chr5_2:3518498-3518517 None:intergenic 65.0%
CTGGTCGGGGCAGGCCCGAA+AGG - chr5_2:3516278-3516297 Msa0750090:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 3514796 3519787 3514796 ID=Msa0750090;Name=Msa0750090
chr5_2 mRNA 3514796 3519787 3514796 ID=Msa0750090-mRNA-1;Parent=Msa0750090;Name=Msa0750090-mRNA-1;_AED=0.14;_eAED=0.14;_QI=337|0.8|0.81|1|0.8|0.72|11|466|742
chr5_2 exon 3514796 3515193 3514796 ID=Msa0750090-mRNA-1:exon:1319;Parent=Msa0750090-mRNA-1
chr5_2 exon 3515306 3515356 3515306 ID=Msa0750090-mRNA-1:exon:1318;Parent=Msa0750090-mRNA-1
chr5_2 exon 3515445 3515642 3515445 ID=Msa0750090-mRNA-1:exon:1317;Parent=Msa0750090-mRNA-1
chr5_2 exon 3515731 3515896 3515731 ID=Msa0750090-mRNA-1:exon:1316;Parent=Msa0750090-mRNA-1
chr5_2 exon 3515976 3516233 3515976 ID=Msa0750090-mRNA-1:exon:1315;Parent=Msa0750090-mRNA-1
chr5_2 exon 3516384 3516484 3516384 ID=Msa0750090-mRNA-1:exon:1314;Parent=Msa0750090-mRNA-1
chr5_2 exon 3516567 3516746 3516567 ID=Msa0750090-mRNA-1:exon:1313;Parent=Msa0750090-mRNA-1
chr5_2 exon 3517209 3517301 3517209 ID=Msa0750090-mRNA-1:exon:1312;Parent=Msa0750090-mRNA-1
chr5_2 exon 3517934 3518020 3517934 ID=Msa0750090-mRNA-1:exon:1311;Parent=Msa0750090-mRNA-1
chr5_2 exon 3518167 3518355 3518167 ID=Msa0750090-mRNA-1:exon:1310;Parent=Msa0750090-mRNA-1
chr5_2 exon 3518477 3519787 3518477 ID=Msa0750090-mRNA-1:exon:1309;Parent=Msa0750090-mRNA-1
chr5_2 five_prime_UTR 3519451 3519787 3519451 ID=Msa0750090-mRNA-1:five_prime_utr;Parent=Msa0750090-mRNA-1
chr5_2 CDS 3518477 3519450 3518477 ID=Msa0750090-mRNA-1:cds;Parent=Msa0750090-mRNA-1
chr5_2 CDS 3518167 3518355 3518167 ID=Msa0750090-mRNA-1:cds;Parent=Msa0750090-mRNA-1
chr5_2 CDS 3517934 3518020 3517934 ID=Msa0750090-mRNA-1:cds;Parent=Msa0750090-mRNA-1
chr5_2 CDS 3517209 3517301 3517209 ID=Msa0750090-mRNA-1:cds;Parent=Msa0750090-mRNA-1
chr5_2 CDS 3516567 3516746 3516567 ID=Msa0750090-mRNA-1:cds;Parent=Msa0750090-mRNA-1
chr5_2 CDS 3516384 3516484 3516384 ID=Msa0750090-mRNA-1:cds;Parent=Msa0750090-mRNA-1
chr5_2 CDS 3515976 3516233 3515976 ID=Msa0750090-mRNA-1:cds;Parent=Msa0750090-mRNA-1
chr5_2 CDS 3515731 3515896 3515731 ID=Msa0750090-mRNA-1:cds;Parent=Msa0750090-mRNA-1
chr5_2 CDS 3515462 3515642 3515462 ID=Msa0750090-mRNA-1:cds;Parent=Msa0750090-mRNA-1
chr5_2 three_prime_UTR 3515445 3515461 3515445 ID=Msa0750090-mRNA-1:three_prime_utr;Parent=Msa0750090-mRNA-1
chr5_2 three_prime_UTR 3515306 3515356 3515306 ID=Msa0750090-mRNA-1:three_prime_utr;Parent=Msa0750090-mRNA-1
chr5_2 three_prime_UTR 3514796 3515193 3514796 ID=Msa0750090-mRNA-1:three_prime_utr;Parent=Msa0750090-mRNA-1
Gene Sequence

>Msa0750090

ATGGGTTCTTATGAAGCAACCAATGTGGTTCTTGCTAAAGTCAAAAACTTTGACCCTGAAAATGCTTCAAAAATCATGGGTTTTCTTCTCATGAACCTTGAAGAATATGAACTTGTTCGTTTAGCATGTTGTCCTGACCAGGTTCTTCATAACCTTGCTATTAGGGTAAAGACCCATTTGGGTATGAACCTATCTACCCCTTCTTCACCTTCACCTCTTAACCCTATTGGAAGAATCACTTCATCTTCCAATAACCCTTTTTCAAAATCTTCTCCTAGAGGAACTGGACTTAGTAATGGTTTTGACTTCAATAGGAACCCTTCATCACCTTCTGGTAATGTTTGGTCACAACCCTCTTTTCCAAAGAACCCTATTAGTCCAAAGTTTAATCCTTTAATGTCTTATGAGAATATCCAAGGTGCTGTTGGTGGCAGTGGTGCTGGTGGTTCTTGTGCTTTTTCACCAAGGGTTAATAATGGTGATTATGATTTTGTTGATGAACAACAGCTGAATGAGTGTTTTCCTTTTCTCAATGAGTCGTCTAACGGCGATGATTTGGTTGATCCGCGTCTTGAAATGGGCGTTGGTGGTCAGAATTGGATCTCTGGTAACAATGGCGATGCTCATAATATTCATAAGAGGAGTTTTTCTGCAAATGATGCTAGTTTTGGTGTTGATGAAAGTGGATTGGGATTTGGTTTTAAGCCATGTCTTTACTTTGCTAGAGGGTTTTGTAAAAATGGTTCCAATTGTAAGTTTGTTCATGGTGATTCGATTGATGCAAATTCCGGTGCTGTTGTTGGTTCACCCAAGTTTGAGGGATTGGAACAACATGAAGAGTTCATGAGGTTCAAGGCTGCTCAGCAGCATCAAAGAATGGTGGCTGCATCACAACTTGCTGCTGGTGGAACATCACCGGTATCGTACGACAAGTACATTGATCTTCTGATGCAGCAGCACAGTGATAATCAAAGAGCCGTGGCTGCGGCAGCATTTGCGATGGGTGAAGAATATTTCAACATTACTGGTCGGGGCAGGCCCGAAAGGAATGAGTTTCTTGCTATGGTTTCTGGGGACAAGCCTAACTCGGCTTCGCGGCAGATTTACTTGACCTTTCCTGCTGAAAGCACATTCAAAGATGAAGATGTTTCGGAGTACTTCAGGTTCCACGCTTTAAAGAGAATATTTGCGGTAATTTTCCACGATTTTCACTGGGCACACCATGAAAGTGGTTTTGCCTGTGCTCCCTGGGGAGAATCCAAATACACGGAAAATCTATTTCCAACTGAAAGAACATTGGTTGTTGTAGTTCATGTTAAGAAATTCTACGTGAAGTATTCCATCAAATTTGGACCTGTCCAAGATGTGAGAATTCCTTACCAGCAAAAGCGCATGTTTGGGTTTGTCACCTTTGTCTTTCCGGAGACAGTGAGAGTCATATTATCGAAAGGAAATCCCCATTTCATATGTGACTCACGTGTGCTTGTGAAACCCTACAAGGAGAAGGGAAAAGTTCCTGACAAGAGACACCAACATCAGCAGCAGCAATTTGAGAGGGGAGATTTTTCGCCATGTTTAAGTCCCTCTGCGTTTGACTCTAAAGAACCTTTTGATTTCCATCCTGGAACAAGAATGCTATACAATCCACATGATATCTTATTGAGAAGGAAAATGGAGGAGCAGGCTGCTGACTTTCAGCAAGTCCTTGAACTCCAAGAAAGGAGGCTGAAGAGTCTGCAGCTTCCAGATTTCAAGAATAATCCGATTCACCACCACCAGCGCAGTCTCTCTGTTGGTGCTCCTTTGGTTTTTCCCCATCAACTTCATAGCCATGTTAACCATGCAGGTCTTTCTCCTGATAACATCCAAGGAGATTTTACAGGCTACAGTGGCAGCCTCACTTCTGCTGGTTCTTTAGGTGCTGCATCTGAGCAGCAGGCGCTACACAAAGAAGCTGATCCATCTTGCATTGATGCTGCTACTGCTGCTGCTGAGAGTGGGAATTTAAAGGATGTTGCAAAGTCTGAAGGCGTAGATCTCGGCATGGGAAATGTGGAGCACACCCTTCCTGACAGTCTCTTTGCTTCACCAACAAAAGCAGCTGGAGATTATCCGTCTGATTTCTCTCCACCGGAAGTGGCTAATGAGAGTACTGCATTTTCGACTAGCTTGTCTCAGAAGTTTGAATCGACAACATCTGCTTCGGGTGACAACATGGCTTCCGTTTAA
Protein sequence

>Msa0750090

MGSYEATNVVLAKVKNFDPENASKIMGFLLMNLEEYELVRLACCPDQVLHNLAIRVKTHLGMNLSTPSSPSPLNPIGRITSSSNNPFSKSSPRGTGLSNGFDFNRNPSSPSGNVWSQPSFPKNPISPKFNPLMSYENIQGAVGGSGAGGSCAFSPRVNNGDYDFVDEQQLNECFPFLNESSNGDDLVDPRLEMGVGGQNWISGNNGDAHNIHKRSFSANDASFGVDESGLGFGFKPCLYFARGFCKNGSNCKFVHGDSIDANSGAVVGSPKFEGLEQHEEFMRFKAAQQHQRMVAASQLAAGGTSPVSYDKYIDLLMQQHSDNQRAVAAAAFAMGEEYFNITGRGRPERNEFLAMVSGDKPNSASRQIYLTFPAESTFKDEDVSEYFRFHALKRIFAVIFHDFHWAHHESGFACAPWGESKYTENLFPTERTLVVVVHVKKFYVKYSIKFGPVQDVRIPYQQKRMFGFVTFVFPETVRVILSKGNPHFICDSRVLVKPYKEKGKVPDKRHQHQQQQFERGDFSPCLSPSAFDSKEPFDFHPGTRMLYNPHDILLRRKMEEQAADFQQVLELQERRLKSLQLPDFKNNPIHHHQRSLSVGAPLVFPHQLHSHVNHAGLSPDNIQGDFTGYSGSLTSAGSLGAASEQQALHKEADPSCIDAATAAAESGNLKDVAKSEGVDLGMGNVEHTLPDSLFASPTKAAGDYPSDFSPPEVANESTAFSTSLSQKFESTTSASGDNMASV*