Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127750 | XP_003626081.1 | 97.203 | 429 | 12 | 0 | 1 | 429 | 1 | 429 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127750 | sp|Q7T0X5|CHMP7_XENLA | 25.806 | 372 | 244 | 11 | 14 | 363 | 9 | 370 | 3.35e-20 | 95.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127750 | G7KUN7 | 97.203 | 429 | 12 | 0 | 1 | 429 | 1 | 429 | 0.0 | 856 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0610130 | Msa1127750 | 0.826010 | 3.430304e-54 | -8.615850e-47 |
| Msa0610180 | Msa1127750 | 0.829330 | 5.469310e-55 | -8.615850e-47 |
| Msa0703910 | Msa1127750 | 0.820287 | 7.429669e-53 | -8.615850e-47 |
| Msa0707250 | Msa1127750 | 0.802317 | 5.942817e-49 | -8.615850e-47 |
| Msa0711150 | Msa1127750 | 0.809617 | 1.732245e-50 | -8.615850e-47 |
| Msa0189040 | Msa1127750 | 0.806827 | 6.808530e-50 | -8.615850e-47 |
| Msa0385490 | Msa1127750 | 0.806812 | 6.858791e-50 | -8.615850e-47 |
| Msa0481030 | Msa1127750 | 0.805796 | 1.123079e-49 | -8.615850e-47 |
| Msa1034310 | Msa1127750 | 0.802989 | 4.316811e-49 | -8.615850e-47 |
| Msa1042660 | Msa1127750 | 0.802540 | 5.345438e-49 | -8.615850e-47 |
| Msa0241140 | Msa1127750 | 0.806466 | 8.116524e-50 | -8.615850e-47 |
| Msa0257500 | Msa1127750 | 0.812982 | 3.223050e-51 | -8.615850e-47 |
| Msa0296820 | Msa1127750 | 0.802588 | 5.225342e-49 | -8.615850e-47 |
| Msa1127750 | Msa1148980 | 0.807079 | 6.021378e-50 | -8.615850e-47 |
| Msa1127750 | Msa1213520 | 0.803878 | 2.824927e-49 | -8.615850e-47 |
| Msa1127750 | Msa1260620 | 0.804091 | 2.551149e-49 | -8.615850e-47 |
| Msa1127750 | Msa1316360 | 0.800099 | 1.689349e-48 | -8.615850e-47 |
| Msa1127750 | Msa1428780 | 0.802243 | 6.152202e-49 | -8.615850e-47 |
| Msa1127750 | Msa1437270 | 0.802471 | 5.524107e-49 | -8.615850e-47 |
| Msa0521670 | Msa1127750 | 0.805321 | 1.412620e-49 | -8.615850e-47 |
| Msa0526960 | Msa1127750 | 0.808571 | 2.900931e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127750 | MtrunA17_Chr7g0270881 | 97.203 | 429 | 12 | 0 | 1 | 429 | 1 | 429 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127750 | AT3G62080.1 | 59.184 | 343 | 139 | 1 | 5 | 346 | 6 | 348 | 3.69e-151 | 436 |
| Msa1127750 | AT3G62080.2 | 59.184 | 343 | 139 | 1 | 5 | 346 | 45 | 387 | 7.73e-151 | 436 |
Find 111 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTTCAATATTATTTAAAT+TGG | 0.082565 | 7_3:+79417433 | None:intergenic |
| ATTTCTCCAGAAAATGAAAT+TGG | 0.195539 | 7_3:+79417259 | None:intergenic |
| TTTGTTAACTCATTGTAATT+AGG | 0.212789 | 7_3:-79413219 | Msa1127750:three_prime_UTR |
| TTGTTAACTCATTGTAATTA+GGG | 0.237675 | 7_3:-79413218 | Msa1127750:three_prime_UTR |
| TTATGAGGAGAAAATGAAAA+TGG | 0.255298 | 7_3:+79417216 | None:intergenic |
| AGGTCCTTTGAGCACACTTT+TGG | 0.261254 | 7_3:-79413153 | Msa1127750:three_prime_UTR |
| CTGAGCCGTGGAAGCACCTT+GGG | 0.290935 | 7_3:+79413174 | None:intergenic |
| CAACCTTAAGCATAGGAATT+AGG | 0.305336 | 7_3:+79416368 | None:intergenic |
| TTCTCTCACTTTCAGACTTA+AGG | 0.310725 | 7_3:+79413354 | None:intergenic |
| CTCTCAGCAGCAGCATTATC+TGG | 0.321416 | 7_3:-79414820 | Msa1127750:CDS |
| AAGAGAAGAAAAGGGGAAAA+TGG | 0.328038 | 7_3:-79417390 | Msa1127750:exon |
| GATTCTTCAGCCATGATATC+TGG | 0.338412 | 7_3:+79416397 | None:intergenic |
| GCAGTGGCTTCTCTACATTC+TGG | 0.347417 | 7_3:-79414093 | Msa1127750:CDS |
| TGAAGAAGGAACTGCAACTT+TGG | 0.366943 | 7_3:-79413500 | Msa1127750:CDS |
| GCAAAGAGCAAGAGAAGAAA+AGG | 0.370095 | 7_3:-79417399 | Msa1127750:five_prime_UTR |
| CATTACGATGAAGAAATTTC+AGG | 0.370723 | 7_3:-79415234 | Msa1127750:CDS |
| GGTCCTAATTCCTATGCTTA+AGG | 0.379944 | 7_3:-79416371 | Msa1127750:intron |
| TTTCTTCATCGTAATGATAC+AGG | 0.382998 | 7_3:+79415241 | None:intergenic |
| GTGATGTTCTGTACTTGATT+TGG | 0.400685 | 7_3:-79414780 | Msa1127750:CDS |
| TCTTCAATATTATTTAAATT+GGG | 0.411886 | 7_3:+79417434 | None:intergenic |
| TCTCCTCATAAAACCTTCTC+AGG | 0.418140 | 7_3:-79417204 | Msa1127750:intron |
| CAAAGAGCAAGAGAAGAAAA+GGG | 0.420773 | 7_3:-79417398 | Msa1127750:five_prime_UTR |
| CCTCTACAAATTCGTTCTTA+AGG | 0.421500 | 7_3:+79415132 | None:intergenic |
| TCTGCGAATCAATGCTCTCT+TGG | 0.434409 | 7_3:+79413761 | None:intergenic |
| GATAACTTCGTCGTTCCAAT+CGG | 0.436175 | 7_3:+79417331 | None:intergenic |
| TTTCTCCAGAAAATGAAATT+GGG | 0.437602 | 7_3:+79417260 | None:intergenic |
| TATGAGGAGAAAATGAAAAT+GGG | 0.446251 | 7_3:+79417217 | None:intergenic |
| CAGTGGCTTCTCTACATTCT+GGG | 0.449968 | 7_3:-79414092 | Msa1127750:CDS |
| GTTTCTGAAGCTATGCAGAT+TGG | 0.453095 | 7_3:-79413847 | Msa1127750:CDS |
| AGCTGGTCTGATTATTAAGT+TGG | 0.457903 | 7_3:+79416423 | None:intergenic |
| AACAATTAGATGTGATTGAC+AGG | 0.458580 | 7_3:-79414738 | Msa1127750:CDS |
| CCAAGGTGCTTCCACGGCTC+AGG | 0.467021 | 7_3:-79413173 | Msa1127750:three_prime_UTR |
| GGTTTACATTGCTAAATTTG+CGG | 0.468034 | 7_3:+79413375 | None:intergenic |
| TCAATATTATTTAAATTGGG+TGG | 0.478586 | 7_3:+79417437 | None:intergenic |
| GCCATGATATCTGGTGTAGC+TGG | 0.492519 | 7_3:+79416406 | None:intergenic |
| GCACCTTGGGGTGCCAAATG+AGG | 0.492611 | 7_3:+79413187 | None:intergenic |
| TTCGCAGAAGGAAGTTGAAA+AGG | 0.493419 | 7_3:-79413746 | Msa1127750:CDS |
| AACATCTATCAGAAAGTCAC+TGG | 0.493712 | 7_3:-79415271 | Msa1127750:CDS |
| GGCACCCCAAGGTGCTTCCA+CGG | 0.496578 | 7_3:-79413179 | Msa1127750:three_prime_UTR |
| AATGAAATTGGGTTGCCAAT+CGG | 0.497801 | 7_3:+79417271 | None:intergenic |
| GTAATGTTGAGGTATCTGTC+AGG | 0.502229 | 7_3:-79415182 | Msa1127750:CDS |
| CAATATTATTTAAATTGGGT+GGG | 0.503105 | 7_3:+79417438 | None:intergenic |
| TTTGTGTATCGACGATGTAC+TGG | 0.503242 | 7_3:-79417059 | Msa1127750:intron |
| AGTTGCAGTTCCTTCTTCAC+TGG | 0.503366 | 7_3:+79413504 | None:intergenic |
| ATAACTTCGTCGTTCCAATC+GGG | 0.505272 | 7_3:+79417332 | None:intergenic |
| AACTTTCAGACCGTCCAGTC+GGG | 0.506473 | 7_3:-79413438 | Msa1127750:CDS |
| CCTGAGCCGTGGAAGCACCT+TGG | 0.507046 | 7_3:+79413173 | None:intergenic |
| TTGCCAATCGGATCTTTGAC+CGG | 0.507149 | 7_3:+79417283 | None:intergenic |
| AGAGCTGGCTCTTGAGAAAG+AGG | 0.509308 | 7_3:-79413557 | Msa1127750:CDS |
| ACCAGCTACACCAGATATCA+TGG | 0.510570 | 7_3:-79416407 | Msa1127750:CDS |
| CTAATTATCGAGTCTCTAGT+AGG | 0.511665 | 7_3:-79413128 | Msa1127750:three_prime_UTR |
| AAGAAATTTCAGGAGATATG+TGG | 0.514245 | 7_3:-79415224 | Msa1127750:CDS |
| GTACATCGTCGATACACAAA+GGG | 0.517215 | 7_3:+79417062 | None:intergenic |
| AAGACTACTACCAGTGAAGA+AGG | 0.526492 | 7_3:-79413514 | Msa1127750:CDS |
| AACATTACAGAAGCTTCATC+CGG | 0.530777 | 7_3:+79415197 | None:intergenic |
| TGGGAGAATCTTCCACTCGT+TGG | 0.534081 | 7_3:+79416463 | None:intergenic |
| TTCTTGACTTCCCGACTGGA+CGG | 0.535316 | 7_3:+79413428 | None:intergenic |
| AGCTATGCAGATTGGAGCAC+GGG | 0.538575 | 7_3:-79413839 | Msa1127750:CDS |
| AACCCTCATTTGGCACCCCA+AGG | 0.539468 | 7_3:-79413190 | Msa1127750:three_prime_UTR |
| GTGGTTCTTGACTTCCCGAC+TGG | 0.540242 | 7_3:+79413424 | None:intergenic |
| CACCTTGGGGTGCCAAATGA+GGG | 0.540899 | 7_3:+79413188 | None:intergenic |
| GTATGCAAGGGAGCTGAAGT+TGG | 0.544956 | 7_3:-79414049 | Msa1127750:CDS |
| TCAGGAGATATGTGGAGGGC+CGG | 0.546577 | 7_3:-79415216 | Msa1127750:CDS |
| GGAACAGAAAATTAGCCCTC+AGG | 0.547297 | 7_3:-79414071 | Msa1127750:CDS |
| TGTAAAAGATTTCATAGCAA+AGG | 0.558892 | 7_3:-79417360 | Msa1127750:CDS |
| TGATGCAGAGTCAACGAAAA+CGG | 0.560271 | 7_3:-79413959 | Msa1127750:intron |
| ACCACTCATGCGGCATCTGA+AGG | 0.561230 | 7_3:-79413406 | Msa1127750:CDS |
| AGAACTCGACTTTGAATGGA+GGG | 0.569869 | 7_3:+79413053 | None:intergenic |
| TAGCAAAGGAAGTTCCCGAT+TGG | 0.572493 | 7_3:-79417346 | Msa1127750:CDS |
| TTTCCGGTCAAAGATCCGAT+TGG | 0.575498 | 7_3:-79417286 | Msa1127750:CDS |
| AATTAGCCCTCAGGTATGCA+AGG | 0.576840 | 7_3:-79414062 | Msa1127750:CDS |
| CAGTCTCTAATGTATAATGA+AGG | 0.585812 | 7_3:-79416517 | Msa1127750:CDS |
| TTGCTAACAACCTTAAGCAT+AGG | 0.586456 | 7_3:+79416361 | None:intergenic |
| TGCTCAAAGGACCTGAGCCG+TGG | 0.588717 | 7_3:+79413162 | None:intergenic |
| CTAGTAGGTAGTACCTGAGA+AGG | 0.589294 | 7_3:+79417191 | None:intergenic |
| AATGATTGGTTTAATCGAGG+AGG | 0.590003 | 7_3:-79417091 | Msa1127750:CDS |
| CGAACTTGAAGAGTTAGAGC+TGG | 0.590091 | 7_3:-79413572 | Msa1127750:CDS |
| AAGCTATGCAGATTGGAGCA+CGG | 0.597275 | 7_3:-79413840 | Msa1127750:CDS |
| TTGAGGTATCTGTCAGGGTG+TGG | 0.599641 | 7_3:-79415176 | Msa1127750:CDS |
| TCGTTGATATCTGTGTATGA+TGG | 0.601282 | 7_3:+79413610 | None:intergenic |
| AAAGAGCAAGAGAAGAAAAG+GGG | 0.604407 | 7_3:-79417397 | Msa1127750:five_prime_UTR |
| CAAAGAAAATAAGATAAGCG+TGG | 0.607783 | 7_3:-79413812 | Msa1127750:CDS |
| TCCTTCAGATGCCGCATGAG+TGG | 0.609145 | 7_3:+79413405 | None:intergenic |
| AAACTTTCAGACCGTCCAGT+CGG | 0.612549 | 7_3:-79413439 | Msa1127750:CDS |
| GAGGGAGACGCTCATTTGAG+AGG | 0.617408 | 7_3:+79413071 | None:intergenic |
| AAGAACTCGACTTTGAATGG+AGG | 0.618714 | 7_3:+79413052 | None:intergenic |
| TAATGTTGAGGTATCTGTCA+GGG | 0.619571 | 7_3:-79415181 | Msa1127750:CDS |
| ATGAAGCTTCTGTAATGTTG+AGG | 0.620445 | 7_3:-79415193 | Msa1127750:CDS |
| AGTCCCAAAAGTGTGCTCAA+AGG | 0.620636 | 7_3:+79413149 | None:intergenic |
| AGAGAGCATTGATTCGCAGA+AGG | 0.621110 | 7_3:-79413758 | Msa1127750:CDS |
| TCAGCTCCCTTGCATACCTG+AGG | 0.625490 | 7_3:+79414055 | None:intergenic |
| GAAGGTGACATCACAAGACG+TGG | 0.627827 | 7_3:-79416499 | Msa1127750:CDS |
| CCTTAAGAACGAATTTGTAG+AGG | 0.628302 | 7_3:-79415132 | Msa1127750:intron |
| AAGGAAGTTGAAAAGGCACT+AGG | 0.631815 | 7_3:-79413739 | Msa1127750:intron |
| CAGCTCCCTTGCATACCTGA+GGG | 0.632956 | 7_3:+79414056 | None:intergenic |
| AAATTTCAGGAGATATGTGG+AGG | 0.635846 | 7_3:-79415221 | Msa1127750:CDS |
| AGTACATCGTCGATACACAA+AGG | 0.640214 | 7_3:+79417061 | None:intergenic |
| AGAGGCTCAAGTTGATACAC+CGG | 0.640753 | 7_3:-79413539 | Msa1127750:CDS |
| AAAAGCTTTGAATCGAGCAA+CGG | 0.643739 | 7_3:+79417307 | None:intergenic |
| TATCATGGCTGAAGAATCTG+TGG | 0.645941 | 7_3:-79416392 | Msa1127750:CDS |
| GATCTTGTTGATCCAACGAG+TGG | 0.652189 | 7_3:-79416475 | Msa1127750:CDS |
| AATAGAGTAGAGGAAGTACA+TGG | 0.652329 | 7_3:-79413991 | Msa1127750:CDS |
| GAAGTCAAGAACCACTCATG+CGG | 0.652468 | 7_3:-79413416 | Msa1127750:CDS |
| ATTAGCCCTCAGGTATGCAA+GGG | 0.658310 | 7_3:-79414061 | Msa1127750:CDS |
| TAGGTCAAGAAAATCAGCAG+TGG | 0.659396 | 7_3:-79414109 | Msa1127750:CDS |
| TGAGCCGTGGAAGCACCTTG+GGG | 0.664588 | 7_3:+79413175 | None:intergenic |
| TGGAACAGCACAGTATCTGT+CGG | 0.667033 | 7_3:-79415156 | Msa1127750:CDS |
| AAGGTGACATCACAAGACGT+GGG | 0.668042 | 7_3:-79416498 | Msa1127750:CDS |
| AATTTCAGGAGATATGTGGA+GGG | 0.688878 | 7_3:-79415220 | Msa1127750:CDS |
| AGGTGACATCACAAGACGTG+GGG | 0.712242 | 7_3:-79416497 | Msa1127750:CDS |
| TACATCGTCGATACACAAAG+GGG | 0.757838 | 7_3:+79417063 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTCAATATTATTTAAATT+GGG | + | chr7_3:79413096-79413115 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAACAAATTTC+AGG | + | chr7_3:79413406-79413425 | None:intergenic | 10.0% |
| !! | ATAGTAATAATTAGAAAAAA+TGG | + | chr7_3:79414682-79414701 | None:intergenic | 10.0% |
| !!! | AGAATATAATAAACTTTTAA+TGG | - | chr7_3:79416092-79416111 | Msa1127750:intron | 10.0% |
| !! | ACATCTAAAAAAAATTTATA+TGG | - | chr7_3:79417422-79417441 | Msa1127750:five_prime_UTR | 10.0% |
| !! | CATCTAAAAAAAATTTATAT+GGG | - | chr7_3:79417423-79417442 | Msa1127750:five_prime_UTR | 10.0% |
| !! | ATCTAAAAAAAATTTATATG+GGG | - | chr7_3:79417424-79417443 | Msa1127750:five_prime_UTR | 10.0% |
| !! | GTCTTCAATATTATTTAAAT+TGG | + | chr7_3:79413097-79413116 | None:intergenic | 15.0% |
| !!! | TTTTTTAGGTTAAAAATGAT+TGG | - | chr7_3:79413422-79413441 | Msa1127750:CDS | 15.0% |
| !! | TTTCTAATTATTACTATTGT+AGG | - | chr7_3:79414685-79414704 | Msa1127750:intron | 15.0% |
| !!! | TACTTTTAAAAATTATTCTG+CGG | - | chr7_3:79414935-79414954 | Msa1127750:intron | 15.0% |
| !! | TTTATTATCTTATACATTTC+AGG | - | chr7_3:79414961-79414980 | Msa1127750:intron | 15.0% |
| !! | TAAAATATAATAATCTACTG+TGG | + | chr7_3:79415960-79415979 | None:intergenic | 15.0% |
| !!! | CATGCATTTATTTATTTTTT+TGG | - | chr7_3:79416880-79416899 | Msa1127750:intron | 15.0% |
| !! | TCTAAAAAAAATTTATATGG+GGG | - | chr7_3:79417425-79417444 | Msa1127750:five_prime_UTR | 15.0% |
| !! | CAATATTATTTAAATTGGGT+GGG | + | chr7_3:79413092-79413111 | None:intergenic | 20.0% |
| !! | TCAATATTATTTAAATTGGG+TGG | + | chr7_3:79413093-79413112 | None:intergenic | 20.0% |
| !! | TGAAAATGAAAAGAAAAAGA+GGG | + | chr7_3:79413377-79413396 | None:intergenic | 20.0% |
| !! | ATGAAAATGAAAAGAAAAAG+AGG | + | chr7_3:79413378-79413397 | None:intergenic | 20.0% |
| !!! | TTTTTTAACAAGTTTAATGG+AGG | + | chr7_3:79413817-79413836 | None:intergenic | 20.0% |
| !!! | CAGTTTTTTAACAAGTTTAA+TGG | + | chr7_3:79413820-79413839 | None:intergenic | 20.0% |
| !! | AACAAAAACAAAAGAAGAAA+AGG | + | chr7_3:79414208-79414227 | None:intergenic | 20.0% |
| !! | TCAAAATTGACCAATTATTT+GGG | + | chr7_3:79414578-79414597 | None:intergenic | 20.0% |
| !! | TTCAAAATTGACCAATTATT+TGG | + | chr7_3:79414579-79414598 | None:intergenic | 20.0% |
| !!! | TCATAGTTTGGAATTATAAT+AGG | + | chr7_3:79414609-79414628 | None:intergenic | 20.0% |
| !!! | ACTTTTAAAAATTATTCTGC+GGG | - | chr7_3:79414936-79414955 | Msa1127750:intron | 20.0% |
| !! | TAGAATTACTAAACAATTTG+AGG | + | chr7_3:79415004-79415023 | None:intergenic | 20.0% |
| !! | TGTTTAGTATTCTATCATTT+AGG | - | chr7_3:79415463-79415482 | Msa1127750:intron | 20.0% |
| !! | TCTTCAAATATATCACATTT+AGG | - | chr7_3:79415496-79415515 | Msa1127750:intron | 20.0% |
| !!! | ATTTCCATTTTTAATTTGAC+AGG | - | chr7_3:79415670-79415689 | Msa1127750:intron | 20.0% |
| !!! | TTTCCATTTTTAATTTGACA+GGG | - | chr7_3:79415671-79415690 | Msa1127750:intron | 20.0% |
| !!! | ATTATATTTTATGTAAGTGC+CGG | - | chr7_3:79415969-79415988 | Msa1127750:intron | 20.0% |
| !! | CTAAATAGGATAAATATGTT+AGG | + | chr7_3:79416401-79416420 | None:intergenic | 20.0% |
| !! | CTAACATATTTATCCTATTT+AGG | - | chr7_3:79416399-79416418 | Msa1127750:CDS | 20.0% |
| !!! | TTTTGCTGAAATCAATAATT+AGG | - | chr7_3:79416842-79416861 | Msa1127750:intron | 20.0% |
| !!! | AAACATATTTTAAGATCTTG+TGG | + | chr7_3:79417238-79417257 | None:intergenic | 20.0% |
| !! | TTTGTTAACTCATTGTAATT+AGG | - | chr7_3:79417308-79417327 | Msa1127750:CDS | 20.0% |
| !! | TTGTTAACTCATTGTAATTA+GGG | - | chr7_3:79417309-79417328 | Msa1127750:CDS | 20.0% |
| ! | TGTAAAAGATTTCATAGCAA+AGG | - | chr7_3:79413167-79413186 | Msa1127750:three_prime_UTR | 25.0% |
| ! | TTTCTCCAGAAAATGAAATT+GGG | + | chr7_3:79413270-79413289 | None:intergenic | 25.0% |
| ! | ATTTCTCCAGAAAATGAAAT+TGG | + | chr7_3:79413271-79413290 | None:intergenic | 25.0% |
| ! | TATGAGGAGAAAATGAAAAT+GGG | + | chr7_3:79413313-79413332 | None:intergenic | 25.0% |
| ! | TTATGAGGAGAAAATGAAAA+TGG | + | chr7_3:79413314-79413333 | None:intergenic | 25.0% |
| ! | AAAAGAAAAAGAGGGAAAAT+TGG | + | chr7_3:79413369-79413388 | None:intergenic | 25.0% |
| !!! | AAAAATGATTGGTTTAATCG+AGG | - | chr7_3:79413433-79413452 | Msa1127750:CDS | 25.0% |
| ! | TAAAGCAAAGAAGTGAATTT+GGG | + | chr7_3:79413583-79413602 | None:intergenic | 25.0% |
| ! | ATAAAGCAAAGAAGTGAATT+TGG | + | chr7_3:79413584-79413603 | None:intergenic | 25.0% |
| ! | AATTCACTTCTTTGCTTTAT+AGG | - | chr7_3:79413584-79413603 | Msa1127750:CDS | 25.0% |
| !! | AAACTACTAGTTTACACTAA+CGG | + | chr7_3:79413704-79413723 | None:intergenic | 25.0% |
| !! | TGTAAACTAGTAGTTTTTGT+TGG | - | chr7_3:79413708-79413727 | Msa1127750:intron | 25.0% |
| ! | TGTTGGAATCAACTATTTAA+CGG | - | chr7_3:79413725-79413744 | Msa1127750:intron | 25.0% |
| ! | CAAAAAACAAAACACGAAAA+GGG | + | chr7_3:79413969-79413988 | None:intergenic | 25.0% |
| ! | ACAAAAAACAAAACACGAAA+AGG | + | chr7_3:79413970-79413989 | None:intergenic | 25.0% |
| ! | GCATGCATAAAATAAACAAA+AGG | + | chr7_3:79414245-79414264 | None:intergenic | 25.0% |
| ! | ATTTCAAATGAACTCTACAA+GGG | + | chr7_3:79414333-79414352 | None:intergenic | 25.0% |
| ! | AATTTCAAATGAACTCTACA+AGG | + | chr7_3:79414334-79414353 | None:intergenic | 25.0% |
| !!! | GAGTTCATTTGAAATTTTCA+TGG | - | chr7_3:79414338-79414357 | Msa1127750:intron | 25.0% |
| !! | TTGAAATTTTCATGGAAGAA+TGG | - | chr7_3:79414346-79414365 | Msa1127750:intron | 25.0% |
| !! | TTGTTTGATAACTTGCAATT+TGG | - | chr7_3:79414435-79414454 | Msa1127750:intron | 25.0% |
| ! | CAAAATTGACCAATTATTTG+GGG | + | chr7_3:79414577-79414596 | None:intergenic | 25.0% |
| !! | TACATTTCAGGTATTTAAGT+TGG | - | chr7_3:79414973-79414992 | Msa1127750:intron | 25.0% |
| ! | TTTAGTAATTCTACAGCATA+AGG | - | chr7_3:79415011-79415030 | Msa1127750:intron | 25.0% |
| !! | ATTTCTGTTTCTTCATATGT+AGG | - | chr7_3:79415212-79415231 | Msa1127750:CDS | 25.0% |
| ! | ATGATAGAATACTAAACAAC+TGG | + | chr7_3:79415461-79415480 | None:intergenic | 25.0% |
| ! | CAAATAACTTCTAACATTTC+TGG | - | chr7_3:79415537-79415556 | Msa1127750:intron | 25.0% |
| !!! | TTCTAACATTTCTGGTAAAT+TGG | - | chr7_3:79415545-79415564 | Msa1127750:intron | 25.0% |
| ! | TACTTGTATATGTATCATGA+AGG | - | chr7_3:79415843-79415862 | Msa1127750:intron | 25.0% |
| !!! | AAGTCGTTTTAACACAAAAA+AGG | - | chr7_3:79416019-79416038 | Msa1127750:intron | 25.0% |
| !!! | TGAGTAATTGTGTTTTGAAT+TGG | + | chr7_3:79416045-79416064 | None:intergenic | 25.0% |
| ! | AGTATAACATCATATGAATG+AGG | + | chr7_3:79416123-79416142 | None:intergenic | 25.0% |
| ! | TATCACCAAATCTTAATTAG+TGG | + | chr7_3:79416166-79416185 | None:intergenic | 25.0% |
| ! | TCAAATTGATCAGTTTACAT+TGG | - | chr7_3:79416610-79416629 | Msa1127750:intron | 25.0% |
| ! | AAAAAATTTATATGGGGGTT+AGG | - | chr7_3:79417430-79417449 | Msa1127750:five_prime_UTR | 25.0% |
| ATTGCTTTGACAAAAAGAGA+GGG | + | chr7_3:79413064-79413083 | None:intergenic | 30.0% | |
| AAAATTGGAAAAACCCTAGT+AGG | + | chr7_3:79413354-79413373 | None:intergenic | 30.0% | |
| CAATTACATACATTTCATGC+TGG | - | chr7_3:79413540-79413559 | Msa1127750:CDS | 30.0% | |
| ! | AGAGGACTAAGTCTATATTT+TGG | - | chr7_3:79413629-79413648 | Msa1127750:intron | 30.0% |
| TCAACTATTTAACGGTTATG+TGG | - | chr7_3:79413733-79413752 | Msa1127750:intron | 30.0% | |
| ! | GTAAAATAGTTCTACACTGA+CGG | - | chr7_3:79413787-79413806 | Msa1127750:CDS | 30.0% |
| TAAAAAACTGACAGAATGAC+AGG | - | chr7_3:79413830-79413849 | Msa1127750:CDS | 30.0% | |
| CTTCATTATACATTAGAGAC+TGG | + | chr7_3:79414012-79414031 | None:intergenic | 30.0% | |
| CAGTCTCTAATGTATAATGA+AGG | - | chr7_3:79414010-79414029 | Msa1127750:CDS | 30.0% | |
| AGAAAAGGTCTCGAAATAAA+TGG | + | chr7_3:79414193-79414212 | None:intergenic | 30.0% | |
| !! | TTATTTTATGCATGCGTGTT+TGG | - | chr7_3:79414250-79414269 | Msa1127750:intron | 30.0% |
| ATCTGAATTACAAATGCACA+AGG | + | chr7_3:79414280-79414299 | None:intergenic | 30.0% | |
| CAACATATATTTCATGTTCC+CGG | - | chr7_3:79414304-79414323 | Msa1127750:intron | 30.0% | |
| AACACGTAAGAATATTGACA+TGG | + | chr7_3:79414374-79414393 | None:intergenic | 30.0% | |
| TATCTGAAAGTTGTAGGTAA+GGG | + | chr7_3:79414524-79414543 | None:intergenic | 30.0% | |
| ACTTTCTATCTGAAAGTTGT+AGG | + | chr7_3:79414530-79414549 | None:intergenic | 30.0% | |
| TACTCAAACAAAGGAAAAGT+TGG | + | chr7_3:79415158-79415177 | None:intergenic | 30.0% | |
| TTTCTTCATCGTAATGATAC+AGG | + | chr7_3:79415289-79415308 | None:intergenic | 30.0% | |
| CATTACGATGAAGAAATTTC+AGG | - | chr7_3:79415293-79415312 | Msa1127750:CDS | 30.0% | |
| AAGAAATTTCAGGAGATATG+TGG | - | chr7_3:79415303-79415322 | Msa1127750:intron | 30.0% | |
| TGATAATCGTTAATACTGAC+AGG | - | chr7_3:79415577-79415596 | Msa1127750:intron | 30.0% | |
| ACACCCTGTCAAATTAAAAA+TGG | + | chr7_3:79415677-79415696 | None:intergenic | 30.0% | |
| AACAATTAGATGTGATTGAC+AGG | - | chr7_3:79415789-79415808 | Msa1127750:intron | 30.0% | |
| GAAAATGTTTCAGTTTATGG+AGG | + | chr7_3:79415926-79415945 | None:intergenic | 30.0% | |
| AGGGAAAATGTTTCAGTTTA+TGG | + | chr7_3:79415929-79415948 | None:intergenic | 30.0% | |
| ATCTACTGTGGAATAAGAAA+GGG | + | chr7_3:79415948-79415967 | None:intergenic | 30.0% | |
| AATCTACTGTGGAATAAGAA+AGG | + | chr7_3:79415949-79415968 | None:intergenic | 30.0% | |
| TAACCAAAATCCTACTAAGA+GGG | + | chr7_3:79415998-79416017 | None:intergenic | 30.0% | |
| ATAACCAAAATCCTACTAAG+AGG | + | chr7_3:79415999-79416018 | None:intergenic | 30.0% | |
| !! | TTAAGATTTGGTGATAGTGT+TGG | - | chr7_3:79416170-79416189 | Msa1127750:intron | 30.0% |
| TAGTAAACTCATGTTCTTAG+AGG | + | chr7_3:79416210-79416229 | None:intergenic | 30.0% | |
| TTTACAAATTTATTCACGCG+AGG | - | chr7_3:79416259-79416278 | Msa1127750:intron | 30.0% | |
| ! | CTGATTTTCTTGACCTAAAT+AGG | + | chr7_3:79416415-79416434 | None:intergenic | 30.0% |
| ! | TGAACATTTTTCTCTACTCT+GGG | + | chr7_3:79416507-79416526 | None:intergenic | 30.0% |
| ! | ATGAACATTTTTCTCTACTC+TGG | + | chr7_3:79416508-79416527 | None:intergenic | 30.0% |
| !! | ATCACTTTTGAATAGAGTAG+AGG | - | chr7_3:79416526-79416545 | Msa1127750:intron | 30.0% |
| TGCTAACAAAGAATGATTAC+TGG | + | chr7_3:79416659-79416678 | None:intergenic | 30.0% | |
| AGTAATCATTCTTTGTTAGC+AGG | - | chr7_3:79416658-79416677 | Msa1127750:intron | 30.0% | |
| CAAAGAAAATAAGATAAGCG+TGG | - | chr7_3:79416715-79416734 | Msa1127750:intron | 30.0% | |
| GGTTTACATTGCTAAATTTG+CGG | + | chr7_3:79417155-79417174 | None:intergenic | 30.0% | |
| CATTGCTTTGACAAAAAGAG+AGG | + | chr7_3:79413065-79413084 | None:intergenic | 35.0% | |
| CAAAGAGCAAGAGAAGAAAA+GGG | - | chr7_3:79413129-79413148 | Msa1127750:three_prime_UTR | 35.0% | |
| AAAGAGCAAGAGAAGAAAAG+GGG | - | chr7_3:79413130-79413149 | Msa1127750:three_prime_UTR | 35.0% | |
| AAGAGAAGAAAAGGGGAAAA+TGG | - | chr7_3:79413137-79413156 | Msa1127750:three_prime_UTR | 35.0% | |
| !! | AAAAGCTTTGAATCGAGCAA+CGG | + | chr7_3:79413223-79413242 | None:intergenic | 35.0% |
| ! | AATGAAATTGGGTTGCCAAT+CGG | + | chr7_3:79413259-79413278 | None:intergenic | 35.0% |
| !! | AATGATTGGTTTAATCGAGG+AGG | - | chr7_3:79413436-79413455 | Msa1127750:CDS | 35.0% |
| TTTGCTTTATAGGCTGTGTT+TGG | - | chr7_3:79413594-79413613 | Msa1127750:CDS | 35.0% | |
| ! | TTTGAATGCAGCATTTTGGA+GGG | + | chr7_3:79413942-79413961 | None:intergenic | 35.0% |
| ! | CATGTTTGAATGCAGCATTT+TGG | + | chr7_3:79413946-79413965 | None:intergenic | 35.0% |
| !!! | GGTCATTTTTCTGACTAGTT+GGG | + | chr7_3:79414086-79414105 | None:intergenic | 35.0% |
| !!! | TGGTCATTTTTCTGACTAGT+TGG | + | chr7_3:79414087-79414106 | None:intergenic | 35.0% |
| ! | AGCTGGTCTGATTATTAAGT+TGG | + | chr7_3:79414107-79414126 | None:intergenic | 35.0% |
| CAACCTTAAGCATAGGAATT+AGG | + | chr7_3:79414162-79414181 | None:intergenic | 35.0% | |
| TTGCTAACAACCTTAAGCAT+AGG | + | chr7_3:79414169-79414188 | None:intergenic | 35.0% | |
| CGGGAACATGAAATATATGT+TGG | + | chr7_3:79414306-79414325 | None:intergenic | 35.0% | |
| CTATCTGAAAGTTGTAGGTA+AGG | + | chr7_3:79414525-79414544 | None:intergenic | 35.0% | |
| GATAGTACACCCCAAATAAT+TGG | - | chr7_3:79414565-79414584 | Msa1127750:intron | 35.0% | |
| AGTGTTTGTGCTTCATAGTT+TGG | + | chr7_3:79414621-79414640 | None:intergenic | 35.0% | |
| TGAAGCACAAACACTTCATA+TGG | - | chr7_3:79414626-79414645 | Msa1127750:intron | 35.0% | |
| TTCATAGGTTTCATGTGAAC+TGG | - | chr7_3:79414736-79414755 | Msa1127750:CDS | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr7_3:79414814-79414833 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr7_3:79414813-79414832 | Msa1127750:CDS | 35.0% | |
| AACCCTGTGCTTCAAATAAA+GGG | + | chr7_3:79414913-79414932 | None:intergenic | 35.0% | |
| AGCATAAGGATTACGTACAT+CGG | - | chr7_3:79415025-79415044 | Msa1127750:intron | 35.0% | |
| TGCATGAAAGCAAACATGAA+CGG | + | chr7_3:79415087-79415106 | None:intergenic | 35.0% | |
| ! | TGCAAACTTAAGTAACTTGC+TGG | + | chr7_3:79415119-79415138 | None:intergenic | 35.0% |
| CATCTAGCATACTCAAACAA+AGG | + | chr7_3:79415167-79415186 | None:intergenic | 35.0% | |
| AACATCTATCAGAAAGTCAC+TGG | - | chr7_3:79415256-79415275 | Msa1127750:CDS | 35.0% | |
| AAATTTCAGGAGATATGTGG+AGG | - | chr7_3:79415306-79415325 | Msa1127750:intron | 35.0% | |
| AATTTCAGGAGATATGTGGA+GGG | - | chr7_3:79415307-79415326 | Msa1127750:intron | 35.0% | |
| AACATTACAGAAGCTTCATC+CGG | + | chr7_3:79415333-79415352 | None:intergenic | 35.0% | |
| ATGAAGCTTCTGTAATGTTG+AGG | - | chr7_3:79415334-79415353 | Msa1127750:intron | 35.0% | |
| ! | TAATGTTGAGGTATCTGTCA+GGG | - | chr7_3:79415346-79415365 | Msa1127750:intron | 35.0% |
| CCTCTACAAATTCGTTCTTA+AGG | + | chr7_3:79415398-79415417 | None:intergenic | 35.0% | |
| CCTTAAGAACGAATTTGTAG+AGG | - | chr7_3:79415395-79415414 | Msa1127750:intron | 35.0% | |
| TATCACATTTAGGTAGCAGT+TGG | - | chr7_3:79415506-79415525 | Msa1127750:intron | 35.0% | |
| CAATGATAATTCCTCCCAAA+GGG | + | chr7_3:79415609-79415628 | None:intergenic | 35.0% | |
| TCAATGATAATTCCTCCCAA+AGG | + | chr7_3:79415610-79415629 | None:intergenic | 35.0% | |
| GGAAATAAGACAAGCAATCT+AGG | + | chr7_3:79415656-79415675 | None:intergenic | 35.0% | |
| GTGATGTTCTGTACTTGATT+TGG | - | chr7_3:79415747-79415766 | Msa1127750:intron | 35.0% | |
| CGTGACCACTAATTAAGATT+TGG | - | chr7_3:79416158-79416177 | Msa1127750:intron | 35.0% | |
| ! | AATAGAGTAGAGGAAGTACA+TGG | - | chr7_3:79416536-79416555 | Msa1127750:intron | 35.0% |
| TCGTTGATATCTGTGTATGA+TGG | + | chr7_3:79416920-79416939 | None:intergenic | 35.0% | |
| TTCTCTCACTTTCAGACTTA+AGG | + | chr7_3:79417176-79417195 | None:intergenic | 35.0% | |
| ! | TAGGGTTTTTAACCCTCATT+TGG | - | chr7_3:79417327-79417346 | Msa1127750:CDS | 35.0% |
| CTAATTATCGAGTCTCTAGT+AGG | - | chr7_3:79417399-79417418 | Msa1127750:five_prime_UTR | 35.0% | |
| GCAAAGAGCAAGAGAAGAAA+AGG | - | chr7_3:79413128-79413147 | Msa1127750:three_prime_UTR | 40.0% | |
| ATAACTTCGTCGTTCCAATC+GGG | + | chr7_3:79413198-79413217 | None:intergenic | 40.0% | |
| GATAACTTCGTCGTTCCAAT+CGG | + | chr7_3:79413199-79413218 | None:intergenic | 40.0% | |
| !! | GCTCGATTCAAAGCTTTTTC+CGG | - | chr7_3:79413225-79413244 | Msa1127750:three_prime_UTR | 40.0% |
| ! | GGCAACCCAATTTCATTTTC+TGG | - | chr7_3:79413262-79413281 | Msa1127750:three_prime_UTR | 40.0% |
| TCTCCTCATAAAACCTTCTC+AGG | - | chr7_3:79413323-79413342 | Msa1127750:three_prime_UTR | 40.0% | |
| !! | GTACCTGAGAAGGTTTTATG+AGG | + | chr7_3:79413329-79413348 | None:intergenic | 40.0% |
| TTCTCAGGTACTACCTACTA+GGG | - | chr7_3:79413338-79413357 | Msa1127750:three_prime_UTR | 40.0% | |
| TACATCGTCGATACACAAAG+GGG | + | chr7_3:79413467-79413486 | None:intergenic | 40.0% | |
| GTACATCGTCGATACACAAA+GGG | + | chr7_3:79413468-79413487 | None:intergenic | 40.0% | |
| AGTACATCGTCGATACACAA+AGG | + | chr7_3:79413469-79413488 | None:intergenic | 40.0% | |
| ! | TTTGTGTATCGACGATGTAC+TGG | - | chr7_3:79413468-79413487 | Msa1127750:CDS | 40.0% |
| !!! | GTTTGGCTCTAGTGTTTTAG+AGG | - | chr7_3:79413611-79413630 | Msa1127750:CDS | 40.0% |
| AAACTGACAGAATGACAGGA+TGG | - | chr7_3:79413834-79413853 | Msa1127750:CDS | 40.0% | |
| ! | GTTTGAATGCAGCATTTTGG+AGG | + | chr7_3:79413943-79413962 | None:intergenic | 40.0% |
| GATTCTTCAGCCATGATATC+TGG | + | chr7_3:79414133-79414152 | None:intergenic | 40.0% | |
| TATCATGGCTGAAGAATCTG+TGG | - | chr7_3:79414135-79414154 | Msa1127750:intron | 40.0% | |
| GGTCCTAATTCCTATGCTTA+AGG | - | chr7_3:79414156-79414175 | Msa1127750:intron | 40.0% | |
| TCAAATGAACTCTACAAGGG+TGG | + | chr7_3:79414330-79414349 | None:intergenic | 40.0% | |
| TTACGTGTTGTACACAGTTG+AGG | - | chr7_3:79414385-79414404 | Msa1127750:intron | 40.0% | |
| TATCTGTGTCAGTGCTTCAT+AGG | - | chr7_3:79414721-79414740 | Msa1127750:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr7_3:79414807-79414826 | Msa1127750:CDS | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr7_3:79414808-79414827 | Msa1127750:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr7_3:79414839-79414858 | Msa1127750:intron | 40.0% | |
| ! | TTGCCCTTTATTTGAAGCAC+AGG | - | chr7_3:79414907-79414926 | Msa1127750:intron | 40.0% |
| ! | TGCCCTTTATTTGAAGCACA+GGG | - | chr7_3:79414908-79414927 | Msa1127750:intron | 40.0% |
| CAACCCTGTGCTTCAAATAA+AGG | + | chr7_3:79414914-79414933 | None:intergenic | 40.0% | |
| ! | CTTTATTTGAAGCACAGGGT+TGG | - | chr7_3:79414912-79414931 | Msa1127750:intron | 40.0% |
| !!! | CGTACATCGGTTCATTTTCA+CGG | - | chr7_3:79415038-79415057 | Msa1127750:intron | 40.0% |
| ! | TTTTCACGGTGTATGATACC+TGG | - | chr7_3:79415052-79415071 | Msa1127750:intron | 40.0% |
| TGTTTGCTTTCATGCAATGC+TGG | - | chr7_3:79415091-79415110 | Msa1127750:intron | 40.0% | |
| TACTTAAGTTTGCAGCTTGC+AGG | - | chr7_3:79415125-79415144 | Msa1127750:intron | 40.0% | |
| ! | GTAATGTTGAGGTATCTGTC+AGG | - | chr7_3:79415345-79415364 | Msa1127750:intron | 40.0% |
| ACATTTAGGTAGCAGTTGGT+GGG | - | chr7_3:79415510-79415529 | Msa1127750:intron | 40.0% | |
| ! | AAGCCCTCTTAGTAGGATTT+TGG | - | chr7_3:79415992-79416011 | Msa1127750:intron | 40.0% |
| ATGTTCTTAGAGGATCACGT+GGG | + | chr7_3:79416200-79416219 | None:intergenic | 40.0% | |
| TAGGTCAAGAAAATCAGCAG+TGG | - | chr7_3:79416418-79416437 | Msa1127750:CDS | 40.0% | |
| TGATGCAGAGTCAACGAAAA+CGG | - | chr7_3:79416568-79416587 | Msa1127750:intron | 40.0% | |
| !! | GTTTCTGAAGCTATGCAGAT+TGG | - | chr7_3:79416680-79416699 | Msa1127750:intron | 40.0% |
| TTCGCAGAAGGAAGTTGAAA+AGG | - | chr7_3:79416781-79416800 | Msa1127750:intron | 40.0% | |
| !! | AAGGAAGTTGAAAAGGCACT+AGG | - | chr7_3:79416788-79416807 | Msa1127750:intron | 40.0% |
| ! | TCACTGGTAGTAGTCTTTTC+CGG | + | chr7_3:79417010-79417029 | None:intergenic | 40.0% |
| AAGACTACTACCAGTGAAGA+AGG | - | chr7_3:79417013-79417032 | Msa1127750:intron | 40.0% | |
| TGAAGAAGGAACTGCAACTT+TGG | - | chr7_3:79417027-79417046 | Msa1127750:intron | 40.0% | |
| TAGCAAAGGAAGTTCCCGAT+TGG | - | chr7_3:79413181-79413200 | Msa1127750:three_prime_UTR | 45.0% | |
| TTTCCGGTCAAAGATCCGAT+TGG | - | chr7_3:79413241-79413260 | Msa1127750:three_prime_UTR | 45.0% | |
| TTGCCAATCGGATCTTTGAC+CGG | + | chr7_3:79413247-79413266 | None:intergenic | 45.0% | |
| CTAGTAGGTAGTACCTGAGA+AGG | + | chr7_3:79413339-79413358 | None:intergenic | 45.0% | |
| CTTCTCAGGTACTACCTACT+AGG | - | chr7_3:79413337-79413356 | Msa1127750:three_prime_UTR | 45.0% | |
| AAGGTGACATCACAAGACGT+GGG | - | chr7_3:79414029-79414048 | Msa1127750:CDS | 45.0% | |
| GATCTTGTTGATCCAACGAG+TGG | - | chr7_3:79414052-79414071 | Msa1127750:CDS | 45.0% | |
| ACCAGCTACACCAGATATCA+TGG | - | chr7_3:79414120-79414139 | Msa1127750:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr7_3:79414803-79414822 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | - | chr7_3:79414835-79414854 | Msa1127750:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr7_3:79414838-79414857 | Msa1127750:CDS | 45.0% | |
| GCTTCAAATAAAGGGCAACC+CGG | + | chr7_3:79414905-79414924 | None:intergenic | 45.0% | |
| TGGAACAGCACAGTATCTGT+CGG | - | chr7_3:79415371-79415390 | Msa1127750:intron | 45.0% | |
| CACATTTAGGTAGCAGTTGG+TGG | - | chr7_3:79415509-79415528 | Msa1127750:intron | 45.0% | |
| ACTGACAGGATTGTTCCCTT+TGG | - | chr7_3:79415591-79415610 | Msa1127750:intron | 45.0% | |
| CTGACAGGATTGTTCCCTTT+GGG | - | chr7_3:79415592-79415611 | Msa1127750:intron | 45.0% | |
| AATCCTACTAAGAGGGCTTC+CGG | + | chr7_3:79415991-79416010 | None:intergenic | 45.0% | |
| CATGTTCTTAGAGGATCACG+TGG | + | chr7_3:79416201-79416220 | None:intergenic | 45.0% | |
| ACACAGCATCGCTGTTAACT+GGG | + | chr7_3:79416345-79416364 | None:intergenic | 45.0% | |
| CAGTGGCTTCTCTACATTCT+GGG | - | chr7_3:79416435-79416454 | Msa1127750:CDS | 45.0% | |
| GGAACAGAAAATTAGCCCTC+AGG | - | chr7_3:79416456-79416475 | Msa1127750:CDS | 45.0% | |
| AATTAGCCCTCAGGTATGCA+AGG | - | chr7_3:79416465-79416484 | Msa1127750:CDS | 45.0% | |
| ATTAGCCCTCAGGTATGCAA+GGG | - | chr7_3:79416466-79416485 | Msa1127750:CDS | 45.0% | |
| AAGCTATGCAGATTGGAGCA+CGG | - | chr7_3:79416687-79416706 | Msa1127750:intron | 45.0% | |
| TCTGCGAATCAATGCTCTCT+TGG | + | chr7_3:79416769-79416788 | None:intergenic | 45.0% | |
| !! | AGAGAGCATTGATTCGCAGA+AGG | - | chr7_3:79416769-79416788 | Msa1127750:intron | 45.0% |
| CGAACTTGAAGAGTTAGAGC+TGG | - | chr7_3:79416955-79416974 | Msa1127750:intron | 45.0% | |
| !! | AGAGGCTCAAGTTGATACAC+CGG | - | chr7_3:79416988-79417007 | Msa1127750:intron | 45.0% |
| AGTTGCAGTTCCTTCTTCAC+TGG | + | chr7_3:79417026-79417045 | None:intergenic | 45.0% | |
| AAACTTTCAGACCGTCCAGT+CGG | - | chr7_3:79417088-79417107 | Msa1127750:CDS | 45.0% | |
| GAAGTCAAGAACCACTCATG+CGG | - | chr7_3:79417111-79417130 | Msa1127750:intron | 45.0% | |
| ! | AGGTCCTTTGAGCACACTTT+TGG | - | chr7_3:79417374-79417393 | Msa1127750:CDS | 45.0% |
| ! | GGTCCTTTGAGCACACTTTT+GGG | - | chr7_3:79417375-79417394 | Msa1127750:exon | 45.0% |
| ! | AGTCCCAAAAGTGTGCTCAA+AGG | + | chr7_3:79417381-79417400 | None:intergenic | 45.0% |
| !!! | AATTTGTTTTTTTTTTTTTT+AGG | - | chr7_3:79413408-79413427 | Msa1127750:CDS | 5.0% |
| GAAGGTGACATCACAAGACG+TGG | - | chr7_3:79414028-79414047 | Msa1127750:CDS | 50.0% | |
| AGGTGACATCACAAGACGTG+GGG | - | chr7_3:79414030-79414049 | Msa1127750:CDS | 50.0% | |
| TGGGAGAATCTTCCACTCGT+TGG | + | chr7_3:79414067-79414086 | None:intergenic | 50.0% | |
| GCCATGATATCTGGTGTAGC+TGG | + | chr7_3:79414124-79414143 | None:intergenic | 50.0% | |
| ATGAACTCTACAAGGGTGGC+CGG | + | chr7_3:79414326-79414345 | None:intergenic | 50.0% | |
| ! | TGTACACAGTTGAGGCATCC+AGG | - | chr7_3:79414393-79414412 | Msa1127750:intron | 50.0% |
| ! | GTACACAGTTGAGGCATCCA+GGG | - | chr7_3:79414394-79414413 | Msa1127750:intron | 50.0% |
| GTCAGATTTCTCAGAGACCC+TGG | + | chr7_3:79414414-79414433 | None:intergenic | 50.0% | |
| GTTGTTGTCATGCGACCGTA+AGG | - | chr7_3:79414763-79414782 | Msa1127750:CDS | 50.0% | |
| GACTTGAACCCGTGACCTTA+CGG | + | chr7_3:79414781-79414800 | None:intergenic | 50.0% | |
| CATGAACGGTTGCTGATACC+AGG | + | chr7_3:79415073-79415092 | None:intergenic | 50.0% | |
| AGTTTGCAGCTTGCAGGACT+TGG | - | chr7_3:79415131-79415150 | Msa1127750:intron | 50.0% | |
| GTTTGCAGCTTGCAGGACTT+GGG | - | chr7_3:79415132-79415151 | Msa1127750:intron | 50.0% | |
| ! | TTGAGGTATCTGTCAGGGTG+TGG | - | chr7_3:79415351-79415370 | Msa1127750:intron | 50.0% |
| ACAGGATTGTTCCCTTTGGG+AGG | - | chr7_3:79415595-79415614 | Msa1127750:intron | 50.0% | |
| CTCTCAGCAGCAGCATTATC+TGG | - | chr7_3:79415707-79415726 | Msa1127750:intron | 50.0% | |
| GACACAGCATCGCTGTTAAC+TGG | + | chr7_3:79416346-79416365 | None:intergenic | 50.0% | |
| GCAGTGGCTTCTCTACATTC+TGG | - | chr7_3:79416434-79416453 | Msa1127750:CDS | 50.0% | |
| GTATGCAAGGGAGCTGAAGT+TGG | - | chr7_3:79416478-79416497 | Msa1127750:CDS | 50.0% | |
| AGCTATGCAGATTGGAGCAC+GGG | - | chr7_3:79416688-79416707 | Msa1127750:intron | 50.0% | |
| ! | AGAGCTGGCTCTTGAGAAAG+AGG | - | chr7_3:79416970-79416989 | Msa1127750:intron | 50.0% |
| AACTTTCAGACCGTCCAGTC+GGG | - | chr7_3:79417089-79417108 | Msa1127750:CDS | 50.0% | |
| TTCTTGACTTCCCGACTGGA+CGG | + | chr7_3:79417102-79417121 | None:intergenic | 50.0% | |
| TGAACTCTACAAGGGTGGCC+GGG | + | chr7_3:79414325-79414344 | None:intergenic | 55.0% | |
| GTCATGCGACCGTAAGGTCA+CGG | - | chr7_3:79414769-79414788 | Msa1127750:CDS | 55.0% | |
| TCATGCGACCGTAAGGTCAC+GGG | - | chr7_3:79414770-79414789 | Msa1127750:CDS | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr7_3:79414782-79414801 | Msa1127750:CDS | 55.0% | |
| CTGAAGCTCCCGCATACACA+GGG | + | chr7_3:79414878-79414897 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATACAC+AGG | + | chr7_3:79414879-79414898 | None:intergenic | 55.0% | |
| TCAGGAGATATGTGGAGGGC+CGG | - | chr7_3:79415311-79415330 | Msa1127750:intron | 55.0% | |
| CAGCTCCCTTGCATACCTGA+GGG | + | chr7_3:79416474-79416493 | None:intergenic | 55.0% | |
| TCAGCTCCCTTGCATACCTG+AGG | + | chr7_3:79416475-79416494 | None:intergenic | 55.0% | |
| GTGGTTCTTGACTTCCCGAC+TGG | + | chr7_3:79417106-79417125 | None:intergenic | 55.0% | |
| ACCACTCATGCGGCATCTGA+AGG | - | chr7_3:79417121-79417140 | Msa1127750:intron | 55.0% | |
| TCCTTCAGATGCCGCATGAG+TGG | + | chr7_3:79417125-79417144 | None:intergenic | 55.0% | |
| AACCCTCATTTGGCACCCCA+AGG | - | chr7_3:79417337-79417356 | Msa1127750:CDS | 55.0% | |
| ! | CACCTTGGGGTGCCAAATGA+GGG | + | chr7_3:79417342-79417361 | None:intergenic | 55.0% |
| GAGGGAGACGCTCATTTGAG+AGG | + | chr7_3:79417459-79417478 | None:intergenic | 55.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr7_3:79414851-79414870 | Msa1127750:intron | 60.0% |
| CATACACAGGGTCCGGGAAG+GGG | + | chr7_3:79414866-79414885 | None:intergenic | 60.0% | |
| GCATACACAGGGTCCGGGAA+GGG | + | chr7_3:79414867-79414886 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGTGTATG+CGG | - | chr7_3:79414866-79414885 | Msa1127750:intron | 60.0% | |
| TTCCCGGACCCTGTGTATGC+GGG | - | chr7_3:79414867-79414886 | Msa1127750:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr7_3:79414883-79414902 | Msa1127750:intron | 60.0% | |
| GTGCCGGAAGCCCTCTTAGT+AGG | - | chr7_3:79415985-79416004 | Msa1127750:intron | 60.0% | |
| ! | GCACCTTGGGGTGCCAAATG+AGG | + | chr7_3:79417343-79417362 | None:intergenic | 60.0% |
| !! | TGAGCCGTGGAAGCACCTTG+GGG | + | chr7_3:79417355-79417374 | None:intergenic | 60.0% |
| !! | CTGAGCCGTGGAAGCACCTT+GGG | + | chr7_3:79417356-79417375 | None:intergenic | 60.0% |
| TGCTCAAAGGACCTGAGCCG+TGG | + | chr7_3:79417368-79417387 | None:intergenic | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr7_3:79414853-79414872 | None:intergenic | 65.0% | |
| CGCATACACAGGGTCCGGGA+AGG | + | chr7_3:79414868-79414887 | None:intergenic | 65.0% | |
| CTCCCGCATACACAGGGTCC+GGG | + | chr7_3:79414872-79414891 | None:intergenic | 65.0% | |
| GCTCCCGCATACACAGGGTC+CGG | + | chr7_3:79414873-79414892 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr7_3:79414884-79414903 | Msa1127750:intron | 65.0% | |
| ! | GGCACCCCAAGGTGCTTCCA+CGG | - | chr7_3:79417348-79417367 | Msa1127750:CDS | 65.0% |
| !! | CCTGAGCCGTGGAAGCACCT+TGG | + | chr7_3:79417357-79417376 | None:intergenic | 65.0% |
| ! | CCAAGGTGCTTCCACGGCTC+AGG | - | chr7_3:79417354-79417373 | Msa1127750:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 79413058 | 79417491 | 79413058 | ID=Msa1127750;Name=Msa1127750 |
| chr7_3 | mRNA | 79413058 | 79417491 | 79413058 | ID=Msa1127750-mRNA-1;Parent=Msa1127750;Name=Msa1127750-mRNA-1;_AED=0.07;_eAED=0.07;_QI=98|1|1|1|1|1|8|320|429 |
| chr7_3 | exon | 79413058 | 79413640 | 79413058 | ID=Msa1127750-mRNA-1:exon:22491;Parent=Msa1127750-mRNA-1 |
| chr7_3 | exon | 79413740 | 79413869 | 79413740 | ID=Msa1127750-mRNA-1:exon:22490;Parent=Msa1127750-mRNA-1 |
| chr7_3 | exon | 79413960 | 79414128 | 79413960 | ID=Msa1127750-mRNA-1:exon:22489;Parent=Msa1127750-mRNA-1 |
| chr7_3 | exon | 79414727 | 79414857 | 79414727 | ID=Msa1127750-mRNA-1:exon:22488;Parent=Msa1127750-mRNA-1 |
| chr7_3 | exon | 79415133 | 79415315 | 79415133 | ID=Msa1127750-mRNA-1:exon:22487;Parent=Msa1127750-mRNA-1 |
| chr7_3 | exon | 79416372 | 79416536 | 79416372 | ID=Msa1127750-mRNA-1:exon:22486;Parent=Msa1127750-mRNA-1 |
| chr7_3 | exon | 79417060 | 79417119 | 79417060 | ID=Msa1127750-mRNA-1:exon:22485;Parent=Msa1127750-mRNA-1 |
| chr7_3 | exon | 79417205 | 79417491 | 79417205 | ID=Msa1127750-mRNA-1:exon:22484;Parent=Msa1127750-mRNA-1 |
| chr7_3 | five_prime_UTR | 79417394 | 79417491 | 79417394 | ID=Msa1127750-mRNA-1:five_prime_utr;Parent=Msa1127750-mRNA-1 |
| chr7_3 | CDS | 79417205 | 79417393 | 79417205 | ID=Msa1127750-mRNA-1:cds;Parent=Msa1127750-mRNA-1 |
| chr7_3 | CDS | 79417060 | 79417119 | 79417060 | ID=Msa1127750-mRNA-1:cds;Parent=Msa1127750-mRNA-1 |
| chr7_3 | CDS | 79416372 | 79416536 | 79416372 | ID=Msa1127750-mRNA-1:cds;Parent=Msa1127750-mRNA-1 |
| chr7_3 | CDS | 79415133 | 79415315 | 79415133 | ID=Msa1127750-mRNA-1:cds;Parent=Msa1127750-mRNA-1 |
| chr7_3 | CDS | 79414727 | 79414857 | 79414727 | ID=Msa1127750-mRNA-1:cds;Parent=Msa1127750-mRNA-1 |
| chr7_3 | CDS | 79413960 | 79414128 | 79413960 | ID=Msa1127750-mRNA-1:cds;Parent=Msa1127750-mRNA-1 |
| chr7_3 | CDS | 79413740 | 79413869 | 79413740 | ID=Msa1127750-mRNA-1:cds;Parent=Msa1127750-mRNA-1 |
| chr7_3 | CDS | 79413378 | 79413640 | 79413378 | ID=Msa1127750-mRNA-1:cds;Parent=Msa1127750-mRNA-1 |
| chr7_3 | three_prime_UTR | 79413058 | 79413377 | 79413058 | ID=Msa1127750-mRNA-1:three_prime_utr;Parent=Msa1127750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
