AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0241140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241140 MtrunA17_Chr2g0292491 92.649 857 63 0 1 857 1 857 0.0 1567
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241140 AT2G34730.1 33.871 868 472 20 18 855 27 822 1.06e-115 372
Msa0241140 AT2G34730.2 32.529 870 481 22 18 855 27 822 1.16e-102 337

Find 179 sgRNAs with CRISPR-Local

Find 529 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACCATTGTCAACAATTTA+TGG 0.126794 2_2:-16580831 None:intergenic
CTCAAGTTTGCGTCAGGATT+TGG 0.210354 2_2:+16579415 Msa0241140:CDS
AGACAGATTGTCAACAAAAT+TGG 0.211709 2_2:+16580554 Msa0241140:CDS
GCTTCAACTTTGGAAGAAAA+TGG 0.221430 2_2:+16579575 Msa0241140:CDS
CAATTTATGGATGAGATTAA+TGG 0.223360 2_2:-16580818 None:intergenic
AAAATTAGTGAATCTTGTTT+AGG 0.224289 2_2:+16578589 Msa0241140:five_prime_UTR
TTATGACAGTGTTCTGTATT+TGG 0.237519 2_2:+16578549 Msa0241140:intron
TTTGCAGATTATCGAGATTC+TGG 0.246664 2_2:+16583864 Msa0241140:intron
GGTTGACTCCATTTGTTTCC+TGG 0.252838 2_2:-16580797 None:intergenic
GATTAGCAAGCCTGATAGTT+TGG 0.261714 2_2:+16579616 Msa0241140:CDS
ATCCGTAATTTCTATCCTTC+TGG 0.262986 2_2:-16579216 None:intergenic
TCGACATAAATCCATCTTTC+CGG 0.263621 2_2:-16579152 None:intergenic
AACTTGAGATCTCTTTATAT+TGG 0.270030 2_2:-16579400 None:intergenic
CCAGGGTAATGTTGCAATAT+TGG 0.280911 2_2:-16582601 None:intergenic
TCTCATGCACTTGAGATTCA+TGG 0.284608 2_2:-16579706 None:intergenic
GGTGAGTGATTCTGTTATAA+AGG 0.296011 2_2:+16578773 Msa0241140:CDS
AGGAGACAGCCTTGTTTGTT+TGG 0.299204 2_2:+16585310 Msa0241140:three_prime_UTR
GACAGTGCTCAAGTTTCTAA+TGG 0.302227 2_2:+16580262 Msa0241140:CDS
TGAAAGTCTGAAAGATACTA+TGG 0.302610 2_2:+16579184 Msa0241140:CDS
ATGAACGGTTGATTATTTCT+AGG 0.307582 2_2:+16578748 Msa0241140:CDS
TCATTTGTCGGCTTCAACTT+TGG 0.307670 2_2:+16579565 Msa0241140:CDS
AGCATTTGTGTATGGCAAAA+AGG 0.333227 2_2:-16585269 None:intergenic
TAAATGTCTCTTTAAAGATA+TGG 0.335516 2_2:+16580150 Msa0241140:CDS
CTCCAGAAGGATAGAAATTA+CGG 0.338178 2_2:+16579214 Msa0241140:CDS
GGTTCGGATTTGGTTGGTTT+AGG 0.341544 2_2:+16579107 Msa0241140:CDS
AAATTAGTGAATCTTGTTTA+GGG 0.341553 2_2:+16578590 Msa0241140:five_prime_UTR
GAAGACTTGCATCTCAAGTA+TGG 0.342654 2_2:+16580196 Msa0241140:CDS
TTGCAGTTTCAAAGATAGAT+TGG 0.343057 2_2:+16579919 Msa0241140:CDS
ATTTAGTTCGGGTTCGGATT+TGG 0.349008 2_2:+16579097 Msa0241140:CDS
TTCTCAGCTTTCTGCTGCTA+TGG 0.356688 2_2:+16580015 Msa0241140:CDS
CATGCTAGCTGATAAGAATA+AGG 0.365981 2_2:+16579976 Msa0241140:CDS
GCTAGTGATGATTTGTTTGC+TGG 0.367348 2_2:+16585176 Msa0241140:three_prime_UTR
GTGAATCTTGTTTAGGGAAG+TGG 0.368230 2_2:+16578596 Msa0241140:five_prime_UTR
CTTTATACACTTCACTTAGT+AGG 0.369820 2_2:+16585290 Msa0241140:three_prime_UTR
AAAGAGTGAAAGCAAATTCA+TGG 0.379581 2_2:-16585343 None:intergenic
TTCTGAGTGGCAGGAGGAGC+AGG 0.380725 2_2:+16579262 Msa0241140:CDS
TTCAACAAGAAGATTTAGTT+CGG 0.381962 2_2:+16579085 Msa0241140:CDS
GGAGGAGCAGGAGTTTCGTT+TGG 0.387511 2_2:+16579274 Msa0241140:CDS
CTTGTCTTTCTTCAATGAAA+AGG 0.390403 2_2:-16579789 None:intergenic
AAGCCTGATAGTTTGGATTC+TGG 0.395489 2_2:+16579623 Msa0241140:CDS
GAGCCAGAATCCAAACTATC+AGG 0.397077 2_2:-16579626 None:intergenic
AAATTGAATGAAGTCCTTGA+TGG 0.397269 2_2:+16579854 Msa0241140:CDS
TTTGTTGTTCTCGGCAGCTT+TGG 0.397817 2_2:-16580395 None:intergenic
GGTGTGAATAGTTGGGAAAA+GGG 0.397859 2_2:-16578184 None:intergenic
ATGATTGGTGTCATAATAAG+AGG 0.398440 2_2:+16579510 Msa0241140:CDS
AGAAAAGCAAAAGATGGAAT+TGG 0.398443 2_2:+16580501 Msa0241140:CDS
GCAGTTGAGCCAACTCAAAA+AGG 0.400587 2_2:+16579037 Msa0241140:CDS
AAGGAAATAAATAAAATTAG+AGG 0.402549 2_2:+16579056 Msa0241140:CDS
AACGACGTGTACCACCTTCA+TGG 0.404579 2_2:-16578944 None:intergenic
AATTGGGAGGTGTGAATAGT+TGG 0.407537 2_2:-16578192 None:intergenic
ACAAGGGGTAACATATGCTT+TGG 0.412873 2_2:+16580474 Msa0241140:CDS
GGTTAATGCTGTTGAGGAAC+AGG 0.417685 2_2:+16578800 Msa0241140:CDS
AAGAAGATTTAGTTCGGGTT+CGG 0.417782 2_2:+16579091 Msa0241140:CDS
TGGTAATTCGCAATTGTATC+CGG 0.418357 2_2:+16579309 Msa0241140:CDS
AATTATATTCAAAGGAGCTT+TGG 0.419678 2_2:+16580348 Msa0241140:CDS
TGAGCACATAATTGAGGAAA+TGG 0.425175 2_2:+16578704 Msa0241140:CDS
ATCGAGTCAATTATGATTGA+AGG 0.426487 2_2:+16580307 Msa0241140:CDS
CTTCAACTTTGGAAGAAAAT+GGG 0.430798 2_2:+16579576 Msa0241140:CDS
GTTCATTTACCCCACAAAAC+AGG 0.433339 2_2:+16578344 Msa0241140:five_prime_UTR
AAGTAGTTTATGTGTTGGTT+CGG 0.436422 2_2:+16578878 Msa0241140:CDS
GAGGGGTTTGTTGTTATGAA+TGG 0.440791 2_2:+16578630 Msa0241140:CDS
ACAGTGCTCAAGTTTCTAAT+GGG 0.444042 2_2:+16580263 Msa0241140:CDS
TGGTTTAGGTGGTATTCTGC+AGG 0.444965 2_2:+16579121 Msa0241140:CDS
TCTGTCAACTTACCCGGTCA+TGG 0.446668 2_2:-16583935 None:intergenic
AATTATGATTGAAGGGCTAC+TGG 0.447637 2_2:+16580315 Msa0241140:CDS
GCTTATTTCTCATGGATCCT+TGG 0.447773 2_2:+16579478 Msa0241140:CDS
CCCCTAAAACACATTATGTA+AGG 0.448319 2_2:+16585210 Msa0241140:three_prime_UTR
TTTGAACCTTCAACCTGCAT+TGG 0.453171 2_2:+16578257 Msa0241140:five_prime_UTR
GGGTTTGTTGTTATGAATGG+TGG 0.454609 2_2:+16578633 Msa0241140:CDS
AGAGATCTCAAGTTTGCGTC+AGG 0.455688 2_2:+16579409 Msa0241140:CDS
AGAAGCTTGAGGATGATGTT+GGG 0.455998 2_2:+16580089 Msa0241140:CDS
TGCTCAAGTTTCTAATGGGC+TGG 0.456563 2_2:+16580267 Msa0241140:CDS
TCGGATTTGGTTGGTTTAGG+TGG 0.456606 2_2:+16579110 Msa0241140:CDS
ATTGGGAGGTGTGAATAGTT+GGG 0.459958 2_2:-16578191 None:intergenic
GTGAGTGATTCTGTTATAAA+GGG 0.464197 2_2:+16578774 Msa0241140:CDS
AAGCTAAGTAGTTTATGTGT+TGG 0.468005 2_2:+16578873 Msa0241140:CDS
TCAACAAGAAGATTTAGTTC+GGG 0.472303 2_2:+16579086 Msa0241140:CDS
GAAATCAACAGTGGAAGAAA+AGG 0.472349 2_2:+16580441 Msa0241140:CDS
AGGTGTGAATAGTTGGGAAA+AGG 0.476008 2_2:-16578185 None:intergenic
GTGCAACGTATATCCTTTCA+AGG 0.477481 2_2:-16582564 None:intergenic
GTTGCAATATTGGTGAATAA+TGG 0.481974 2_2:-16582591 None:intergenic
TCTCAGCTTTCTGCTGCTAT+GGG 0.484028 2_2:+16580016 Msa0241140:CDS
AAGGGAAACCAGGAAACAAA+TGG 0.491127 2_2:+16580789 Msa0241140:CDS
GCAATTTCTCATTTCCATCA+AGG 0.492086 2_2:-16579868 None:intergenic
GTGCACTGGCTTTGTTCTTG+AGG 0.494154 2_2:-16581415 None:intergenic
TGATTCTGTTATAAAGGGTA+TGG 0.496821 2_2:+16578779 Msa0241140:CDS
TGTGGAGAACAGTAAAGAGT+TGG 0.497087 2_2:+16580579 Msa0241140:CDS
ACTGGGACGCTTATTTCTCA+TGG 0.498313 2_2:+16579470 Msa0241140:CDS
AACAACACTTTCTGAGTGGC+AGG 0.500450 2_2:+16579253 Msa0241140:CDS
GAAGCTCCAATGCAGGTTGA+AGG 0.505438 2_2:-16578263 None:intergenic
GCTTTCGACAGATCATTTGT+CGG 0.506401 2_2:+16579553 Msa0241140:CDS
ACGACGTGTACCACCTTCAT+GGG 0.509179 2_2:-16578943 None:intergenic
ATTAATCAAATTATATTCAA+AGG 0.512709 2_2:+16580340 Msa0241140:CDS
TTTCCTTTGCTGCTGCAACT+AGG 0.513015 2_2:-16580618 None:intergenic
AGCTAAAATGATGTGGTCTT+CGG 0.514765 2_2:+16578905 Msa0241140:CDS
AAACTTGTTTAACCCATGAC+CGG 0.515650 2_2:+16583922 Msa0241140:exon
CAATATTGCAACATTACCCT+GGG 0.515679 2_2:+16582602 Msa0241140:CDS
ATGTTTCAAGAAATTGTATG+AGG 0.515816 2_2:+16580881 Msa0241140:CDS
CAGAAGCTTGAGGATGATGT+TGG 0.516189 2_2:+16580088 Msa0241140:CDS
AAATAATTGTGATGCGGTGG+TGG 0.516961 2_2:-16578156 None:intergenic
GGAACAAGAAAAGCAAAAGA+TGG 0.518661 2_2:+16580495 Msa0241140:CDS
TGTTATGAATGGTGGTGAAA+AGG 0.519449 2_2:+16578641 Msa0241140:CDS
TACATGAAGATCTCGAACAA+AGG 0.522789 2_2:+16580671 Msa0241140:CDS
AGTTCGGGTTCGGATTTGGT+TGG 0.524274 2_2:+16579101 Msa0241140:CDS
GTGTATAAAGCATTTGTGTA+TGG 0.525039 2_2:-16585277 None:intergenic
CAATCTCCTGCTGCAAACTC+CGG 0.526723 2_2:-16579328 None:intergenic
TTGTATCCGGAGTTTGCAGC+AGG 0.528620 2_2:+16579322 Msa0241140:CDS
ACATGAAGATCTCGAACAAA+GGG 0.529153 2_2:+16580672 Msa0241140:CDS
TGCACTTAAAACCATGGGAT+TGG 0.529855 2_2:+16581433 Msa0241140:CDS
AGGAGAATGTGCCGGAAAGA+TGG 0.531020 2_2:+16579141 Msa0241140:CDS
CCTTGGAGCATACTGATGAT+TGG 0.531339 2_2:+16579495 Msa0241140:CDS
ACGGTTGATTATTTCTAGGA+TGG 0.533363 2_2:+16578752 Msa0241140:CDS
AAAAGGAGAATTTATTACAA+GGG 0.533806 2_2:+16580458 Msa0241140:CDS
TCGTTTGGAAATTGAGCGGA+TGG 0.537346 2_2:+16579289 Msa0241140:CDS
CTTGTAAGAAGAGAATTGAC+TGG 0.539649 2_2:+16583889 Msa0241140:CDS
GTGTGAATAGTTGGGAAAAG+GGG 0.541301 2_2:-16578183 None:intergenic
CTGTCAACTTACCCGGTCAT+GGG 0.544847 2_2:-16583934 None:intergenic
TAGGGAAGTGGAAATGATGA+AGG 0.545644 2_2:+16578608 Msa0241140:exon
TTTGGATTCTGGCTCTCTGA+AGG 0.545981 2_2:+16579634 Msa0241140:CDS
CCAATATTGCAACATTACCC+TGG 0.549573 2_2:+16582601 Msa0241140:CDS
CTATGGATTCTTTCTCCAGA+AGG 0.549982 2_2:+16579201 Msa0241140:CDS
GAAGTGGAAATGATGAAGGA+GGG 0.552664 2_2:+16578612 Msa0241140:exon
GGGTATGGTTAATGCTGTTG+AGG 0.552686 2_2:+16578794 Msa0241140:CDS
GTGTATTGAGGCAAAAGAAA+GGG 0.560124 2_2:+16580771 Msa0241140:CDS
TAATAAATGAGAGTGAGAAA+AGG 0.560276 2_2:-16578110 None:intergenic
AAAGGAGAATTTATTACAAG+GGG 0.560840 2_2:+16580459 Msa0241140:CDS
CTCTTCTTAGACTCCTTGAA+AGG 0.561258 2_2:+16582551 Msa0241140:CDS
AGTGTATTGAGGCAAAAGAA+AGG 0.562250 2_2:+16580770 Msa0241140:CDS
AAACCTAGTTGCAGCAGCAA+AGG 0.563546 2_2:+16580615 Msa0241140:CDS
GAAAAGGAGAATTTATTACA+AGG 0.565102 2_2:+16580457 Msa0241140:CDS
GCCAGTGCACTTAAAACCAT+GGG 0.568732 2_2:+16581428 Msa0241140:CDS
AGATGCATTGGAGTGTATTG+AGG 0.572251 2_2:+16580759 Msa0241140:CDS
ATCTGAGAATCTTCAACTGA+AGG 0.576258 2_2:+16579952 Msa0241140:CDS
TTGCTTGTACACCAATCCCA+TGG 0.579201 2_2:-16581444 None:intergenic
AAGAGAGAATCTGGAACGGT+GGG 0.580152 2_2:-16578228 None:intergenic
TTGTCAACAAAATTGGATTG+TGG 0.582697 2_2:+16580561 Msa0241140:CDS
TCTTGGTGAGCACATAATTG+AGG 0.583633 2_2:+16578698 Msa0241140:CDS
AAAGAGAGAATCTGGAACGG+TGG 0.585070 2_2:-16578229 None:intergenic
CATCCATAAATTGTTGACAA+TGG 0.586642 2_2:+16580828 Msa0241140:CDS
TAAACTGTCAAGCTGTTGAG+AGG 0.588332 2_2:-16580524 None:intergenic
CTATTGAATCTGAAAGAAAG+AGG 0.588345 2_2:+16579761 Msa0241140:CDS
TCGAGTCAATTATGATTGAA+GGG 0.591000 2_2:+16580308 Msa0241140:CDS
TCGAAAGCTTCAAGTGGACA+TGG 0.594594 2_2:-16579538 None:intergenic
TTATGTTGAAGCTCCAATGC+AGG 0.595093 2_2:-16578270 None:intergenic
AAAGGAAATTGAAGAATACA+AGG 0.596002 2_2:+16580633 Msa0241140:CDS
AGCCAGTGCACTTAAAACCA+TGG 0.598471 2_2:+16581427 Msa0241140:CDS
GGAAGTGGAAATGATGAAGG+AGG 0.600066 2_2:+16578611 Msa0241140:exon
TTGGAAGAAAATGGGAAGCA+CGG 0.601297 2_2:+16579584 Msa0241140:CDS
AACTTGTTTAACCCATGACC+GGG 0.603219 2_2:+16583923 Msa0241140:exon
AGGCAAAAGAAAGGGAAACC+AGG 0.604868 2_2:+16580779 Msa0241140:CDS
ACAATCTGTTCAGAAGCTTG+AGG 0.610988 2_2:+16580078 Msa0241140:CDS
AGATAGATTTATGAAGCCTG+TGG 0.611012 2_2:+16578989 Msa0241140:CDS
AAGGATGATGATGAGAGTCT+TGG 0.618836 2_2:+16578681 Msa0241140:CDS
TATTCTGCAGGAGAATGTGC+CGG 0.623360 2_2:+16579133 Msa0241140:CDS
GTGAAATAATTGTGATGCGG+TGG 0.624794 2_2:-16578159 None:intergenic
GATCTGTCGAAAGCTTCAAG+TGG 0.625999 2_2:-16579544 None:intergenic
TCTTGCAAAGGCTGAAGCAG+AGG 0.627303 2_2:+16581490 Msa0241140:CDS
GAAGCTTGAGGATGATGTTG+GGG 0.628459 2_2:+16580090 Msa0241140:CDS
ATACTAGAGCCAAACAAACA+AGG 0.638503 2_2:-16585319 None:intergenic
TTTGTGGGGTAAATGAACAC+TGG 0.639521 2_2:-16578339 None:intergenic
CGTTGTAATGAAACCCATGA+AGG 0.644493 2_2:+16578930 Msa0241140:CDS
AGAAACTTGAGCACTGTCAA+CGG 0.646105 2_2:-16580257 None:intergenic
GATAGATTTATGAAGCCTGT+GGG 0.646275 2_2:+16578990 Msa0241140:CDS
AGTTTCGTTTGGAAATTGAG+CGG 0.647114 2_2:+16579285 Msa0241140:CDS
AAGTGGAAATGATGAAGGAG+GGG 0.647655 2_2:+16578613 Msa0241140:exon
CGGATGAAGCTAAAATGATG+TGG 0.651813 2_2:+16578898 Msa0241140:CDS
CCAATCATCAGTATGCTCCA+AGG 0.652705 2_2:-16579495 None:intergenic
TGTAATGAAACCCATGAAGG+TGG 0.653529 2_2:+16578933 Msa0241140:CDS
TGATTGGTGTCATAATAAGA+GGG 0.657093 2_2:+16579511 Msa0241140:CDS
AACACTTTCTGAGTGGCAGG+AGG 0.664523 2_2:+16579256 Msa0241140:CDS
TCAAATTTAAGACTACCCAC+AGG 0.666742 2_2:-16579005 None:intergenic
AATTACGGATCAGTTATCGA+AGG 0.666771 2_2:+16579229 Msa0241140:CDS
GTCACAGCAACAACTGACTG+AGG 0.687357 2_2:+16580045 Msa0241140:CDS
ACTTACGTTGAAATCAACAG+TGG 0.697644 2_2:+16580432 Msa0241140:CDS
TAATGCTGTTGAGGAACAGG+CGG 0.704892 2_2:+16578803 Msa0241140:CDS
TGGAAAGAGAGAATCTGGAA+CGG 0.705022 2_2:-16578232 None:intergenic
AGGTAACAACACTTTCTGAG+TGG 0.720674 2_2:+16579249 Msa0241140:CDS
GGTGTGAAATAATTGTGATG+CGG 0.752734 2_2:-16578162 None:intergenic
AATATTGCAACATTACCCTG+GGG 0.779062 2_2:+16582603 Msa0241140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAAAATAAACAAAAG+GGG - chr2_2:16578459-16578478 None:intergenic 10.0%
!! CATAATAAAAATAAACAAAA+GGG - chr2_2:16578460-16578479 None:intergenic 10.0%
!! ATTAATCAAATTATATTCAA+AGG + chr2_2:16580340-16580359 Msa0241140:CDS 10.0%
!! ATTTCAAAAAATATCTTATA+GGG - chr2_2:16581888-16581907 None:intergenic 10.0%
!! GCATAATAAAAATAAACAAA+AGG - chr2_2:16578461-16578480 None:intergenic 15.0%
!! AAGGAAATAAATAAAATTAG+AGG + chr2_2:16579056-16579075 Msa0241140:CDS 15.0%
!!! TAATTTTTTGAAGGATAATT+TGG + chr2_2:16581092-16581111 Msa0241140:intron 15.0%
!!! AATTTTTTGAAGGATAATTT+GGG + chr2_2:16581093-16581112 Msa0241140:intron 15.0%
!! AATTATTACAATTATTAGAG+AGG - chr2_2:16581149-16581168 None:intergenic 15.0%
!! CATTTCAAAAAATATCTTAT+AGG - chr2_2:16581889-16581908 None:intergenic 15.0%
!!! ATTGTAATTTGTAAAAACTT+AGG + chr2_2:16582099-16582118 Msa0241140:intron 15.0%
!! AAAAATTATATTTAGAAGTG+GGG - chr2_2:16582199-16582218 None:intergenic 15.0%
!! CAAAAATTATATTTAGAAGT+GGG - chr2_2:16582200-16582219 None:intergenic 15.0%
!!! TAGTTGTTTTTAAATATAGT+TGG + chr2_2:16582850-16582869 Msa0241140:intron 15.0%
!! TTATACTTAACAAATCTAAT+TGG - chr2_2:16583573-16583592 None:intergenic 15.0%
!!! TAGTTTTCTTATTTGTAATT+TGG + chr2_2:16583746-16583765 Msa0241140:intron 15.0%
!!! CTTTCTAAAAACATTTTTTT+TGG + chr2_2:16584162-16584181 Msa0241140:intron 15.0%
!! TACAAGATTTAAACATAAAA+TGG - chr2_2:16585108-16585127 None:intergenic 15.0%
!! TTTATGTTTAAATCTTGTAA+TGG + chr2_2:16585109-16585128 Msa0241140:intron 15.0%
!!! ATCTGTATATGTTAATTTTA+TGG + chr2_2:16585419-16585438 Msa0241140:three_prime_UTR 15.0%
!!! AAAATTAGTGAATCTTGTTT+AGG + chr2_2:16578589-16578608 Msa0241140:five_prime_UTR 20.0%
!!! AAATTAGTGAATCTTGTTTA+GGG + chr2_2:16578590-16578609 Msa0241140:five_prime_UTR 20.0%
!!! TATTTATTTCCTTTTTGAGT+TGG - chr2_2:16579049-16579068 None:intergenic 20.0%
!!! TAAATGTCTCTTTAAAGATA+TGG + chr2_2:16580150-16580169 Msa0241140:CDS 20.0%
!!! ATATTTTAGTTTGTTGTTCT+CGG - chr2_2:16580407-16580426 None:intergenic 20.0%
!! AAAAGGAGAATTTATTACAA+GGG + chr2_2:16580458-16580477 Msa0241140:CDS 20.0%
!!! AAAATTTATTTTAACCAGCA+AGG + chr2_2:16581032-16581051 Msa0241140:intron 20.0%
!!! ATTTTTTGAAGGATAATTTG+GGG + chr2_2:16581094-16581113 Msa0241140:intron 20.0%
!! TTAAACTCGATTTCATATTA+TGG + chr2_2:16581315-16581334 Msa0241140:intron 20.0%
!!! TCATATTATGGTAATGATTA+TGG + chr2_2:16581327-16581346 Msa0241140:intron 20.0%
!! AAAAAATTATGTGATGTTTC+TGG - chr2_2:16581523-16581542 None:intergenic 20.0%
!!! TTGTAAAAACTTAGGTATTT+TGG + chr2_2:16582107-16582126 Msa0241140:intron 20.0%
!! AAAATTATATTTAGAAGTGG+GGG - chr2_2:16582198-16582217 None:intergenic 20.0%
!! GCAAAAATTATATTTAGAAG+TGG - chr2_2:16582201-16582220 None:intergenic 20.0%
!!! ATTAGATATCTTTTCAAGTT+GGG - chr2_2:16582406-16582425 None:intergenic 20.0%
!! TTAATGATTGTACATAATTG+AGG + chr2_2:16582654-16582673 Msa0241140:intron 20.0%
!! ATTAAATATGTGTACTCTTT+GGG - chr2_2:16582822-16582841 None:intergenic 20.0%
!! TATTAAATATGTGTACTCTT+TGG - chr2_2:16582823-16582842 None:intergenic 20.0%
!!! TTTTAAATATAGTTGGATGT+TGG + chr2_2:16582857-16582876 Msa0241140:intron 20.0%
!! TTTAAATATAGTTGGATGTT+GGG + chr2_2:16582858-16582877 Msa0241140:intron 20.0%
!!! AACATTAAAACAAAGTATCA+GGG - chr2_2:16583130-16583149 None:intergenic 20.0%
!!! TAACATTAAAACAAAGTATC+AGG - chr2_2:16583131-16583150 None:intergenic 20.0%
!! ATTACTAAGTAATGTAGAAT+TGG + chr2_2:16583241-16583260 Msa0241140:intron 20.0%
!!! AACAACAAAACTTTCATTTT+CGG - chr2_2:16583268-16583287 None:intergenic 20.0%
!! GTCTTATATCATAATCATAT+TGG - chr2_2:16583357-16583376 None:intergenic 20.0%
!! CTAATAAACCAAAACAAATA+CGG - chr2_2:16583429-16583448 None:intergenic 20.0%
!! GTCACATGTTTAATTAAATT+AGG + chr2_2:16583695-16583714 Msa0241140:intron 20.0%
!! ACATGTTTAATTAAATTAGG+AGG + chr2_2:16583698-16583717 Msa0241140:intron 20.0%
!! ATTTCCTTATCAATACTTAT+CGG - chr2_2:16584009-16584028 None:intergenic 20.0%
!!! AATTTTGATACACAGAAAAA+TGG + chr2_2:16584247-16584266 Msa0241140:intron 20.0%
!! ATATACCTTAAGAGAATTAT+AGG - chr2_2:16584398-16584417 None:intergenic 20.0%
!!! TTTCATTTTCATCTTTCTTT+TGG + chr2_2:16584888-16584907 Msa0241140:intron 20.0%
! TAATAAATGAGAGTGAGAAA+AGG - chr2_2:16578113-16578132 None:intergenic 25.0%
! AAGAATGAAAAATAATTGGG+AGG - chr2_2:16578208-16578227 None:intergenic 25.0%
! GGGAAGAATGAAAAATAATT+GGG - chr2_2:16578211-16578230 None:intergenic 25.0%
! TGGGAAGAATGAAAAATAAT+TGG - chr2_2:16578212-16578231 None:intergenic 25.0%
! TCCAAACTTTAATCATGTTA+TGG - chr2_2:16578415-16578434 None:intergenic 25.0%
!!! AGTTTGGATTTTTAGCTATT+TGG + chr2_2:16578427-16578446 Msa0241140:intron 25.0%
!!! GTTTGGATTTTTAGCTATTT+GGG + chr2_2:16578428-16578447 Msa0241140:intron 25.0%
!!! AGTTTTTTTTTCTCTTTCTC+TGG + chr2_2:16578481-16578500 Msa0241140:intron 25.0%
!!! GTTTTTTTTTCTCTTTCTCT+GGG + chr2_2:16578482-16578501 Msa0241140:intron 25.0%
!!! TGTATTTGGATTGTTTTGAA+TGG + chr2_2:16578563-16578582 Msa0241140:five_prime_UTR 25.0%
!!! TTTTTGATGATATCGATGAA+CGG + chr2_2:16578733-16578752 Msa0241140:CDS 25.0%
! TTCAACAAGAAGATTTAGTT+CGG + chr2_2:16579085-16579104 Msa0241140:CDS 25.0%
! AACTTGAGATCTCTTTATAT+TGG - chr2_2:16579403-16579422 None:intergenic 25.0%
! AATTATATTCAAAGGAGCTT+TGG + chr2_2:16580348-16580367 Msa0241140:CDS 25.0%
! GAAAAGGAGAATTTATTACA+AGG + chr2_2:16580457-16580476 Msa0241140:CDS 25.0%
! AAAGGAGAATTTATTACAAG+GGG + chr2_2:16580459-16580478 Msa0241140:CDS 25.0%
! AAAGGAAATTGAAGAATACA+AGG + chr2_2:16580633-16580652 Msa0241140:CDS 25.0%
! AAAAAATCATCAAGATGCAT+TGG + chr2_2:16580747-16580766 Msa0241140:CDS 25.0%
! CAATTTATGGATGAGATTAA+TGG - chr2_2:16580821-16580840 None:intergenic 25.0%
! TAACCATTGTCAACAATTTA+TGG - chr2_2:16580834-16580853 None:intergenic 25.0%
! ATGTTTCAAGAAATTGTATG+AGG + chr2_2:16580881-16580900 Msa0241140:CDS 25.0%
! ACGAGACATTAAATTAGAAA+AGG - chr2_2:16580927-16580946 None:intergenic 25.0%
!! TTTTAACGCTTCATTATTGA+TGG - chr2_2:16581016-16581035 None:intergenic 25.0%
! GACATTACCTTTGAATTATT+TGG + chr2_2:16581054-16581073 Msa0241140:intron 25.0%
! TCACATTCCAAATAATTCAA+AGG - chr2_2:16581064-16581083 None:intergenic 25.0%
!! TTTCTATCCACAAAATTTTC+AGG - chr2_2:16581240-16581259 None:intergenic 25.0%
!! TTATCTATTTCTCAATCTTG+TGG + chr2_2:16581594-16581613 Msa0241140:intron 25.0%
! ATGGGAACAAGTAAAAATTT+GGG - chr2_2:16581694-16581713 None:intergenic 25.0%
! TATGGGAACAAGTAAAAATT+TGG - chr2_2:16581695-16581714 None:intergenic 25.0%
!!! AAATGTGATTTTGATTACCA+TGG - chr2_2:16581733-16581752 None:intergenic 25.0%
! AAATGTTATAAGTGCCAAAA+AGG + chr2_2:16581914-16581933 Msa0241140:intron 25.0%
! TCTGTGTATGTTAACATTTA+GGG - chr2_2:16582007-16582026 None:intergenic 25.0%
! TTCTGTGTATGTTAACATTT+AGG - chr2_2:16582008-16582027 None:intergenic 25.0%
! ATGTTAACATACACAGAAAA+TGG + chr2_2:16582010-16582029 Msa0241140:intron 25.0%
! GAAAATATGAAAATACGTCA+AGG + chr2_2:16582073-16582092 Msa0241140:intron 25.0%
! AGAAGGAGAAAAAATAGATT+TGG + chr2_2:16582312-16582331 Msa0241140:intron 25.0%
!!! GATTAGATATCTTTTCAAGT+TGG - chr2_2:16582407-16582426 None:intergenic 25.0%
! AAAAGATATCTAATCTTCAC+TGG + chr2_2:16582412-16582431 Msa0241140:intron 25.0%
! AAAGATATCTAATCTTCACT+GGG + chr2_2:16582413-16582432 Msa0241140:intron 25.0%
! TGATAAAAATAGACTCTCTA+TGG - chr2_2:16582709-16582728 None:intergenic 25.0%
! GCTGTTTATTATACAATAGT+GGG + chr2_2:16582734-16582753 Msa0241140:intron 25.0%
! TATTAGAAAACTACTCATCA+TGG + chr2_2:16582937-16582956 Msa0241140:intron 25.0%
! ATGATTAATATAACCAACTG+CGG + chr2_2:16583008-16583027 Msa0241140:intron 25.0%
! GAGACATTCATGAAAAAAAA+AGG + chr2_2:16583062-16583081 Msa0241140:intron 25.0%
! ATCTAATTGGACACTAAAAA+TGG - chr2_2:16583560-16583579 None:intergenic 25.0%
! GTTAAGTATAACTTGAAAGA+TGG + chr2_2:16583582-16583601 Msa0241140:intron 25.0%
! TGTTTAATTAAATTAGGAGG+TGG + chr2_2:16583701-16583720 Msa0241140:intron 25.0%
! TTTCCTTATCAATACTTATC+GGG - chr2_2:16584008-16584027 None:intergenic 25.0%
! TTGAACCTATAATTCTCTTA+AGG + chr2_2:16584390-16584409 Msa0241140:intron 25.0%
! CAAGAAACATAGAAAGTAAT+TGG + chr2_2:16584502-16584521 Msa0241140:intron 25.0%
! AGGACTAAGATAAATTATTC+AGG - chr2_2:16584696-16584715 None:intergenic 25.0%
! ATGAACTATTAAGGTCTATT+TGG - chr2_2:16584864-16584883 None:intergenic 25.0%
!! TTTGGTTTCTCATTATGAAT+TGG + chr2_2:16584906-16584925 Msa0241140:intron 25.0%
!!! TTAAATCTTGTAATGGATAC+AGG + chr2_2:16585116-16585135 Msa0241140:intron 25.0%
!! TCCTTACATAATGTGTTTTA+GGG - chr2_2:16585214-16585233 None:intergenic 25.0%
!! TTCCTTACATAATGTGTTTT+AGG - chr2_2:16585215-16585234 None:intergenic 25.0%
AAAAATGGAAAGAGAGAATC+TGG - chr2_2:16578240-16578259 None:intergenic 30.0%
! AATCCTTATACCTGTTTTGT+GGG - chr2_2:16578357-16578376 None:intergenic 30.0%
! AAATCCTTATACCTGTTTTG+TGG - chr2_2:16578358-16578377 None:intergenic 30.0%
GCCATAACATGATTAAAGTT+TGG + chr2_2:16578411-16578430 Msa0241140:intron 30.0%
TTATGACAGTGTTCTGTATT+TGG + chr2_2:16578549-16578568 Msa0241140:intron 30.0%
! ATGAACGGTTGATTATTTCT+AGG + chr2_2:16578748-16578767 Msa0241140:CDS 30.0%
GTGAGTGATTCTGTTATAAA+GGG + chr2_2:16578774-16578793 Msa0241140:CDS 30.0%
TGATTCTGTTATAAAGGGTA+TGG + chr2_2:16578779-16578798 Msa0241140:CDS 30.0%
AAGCTAAGTAGTTTATGTGT+TGG + chr2_2:16578873-16578892 Msa0241140:CDS 30.0%
!! AAGTAGTTTATGTGTTGGTT+CGG + chr2_2:16578878-16578897 Msa0241140:CDS 30.0%
!!! TCGTTTTTTAGATGGTGTTA+TGG + chr2_2:16578962-16578981 Msa0241140:CDS 30.0%
! TCAACAAGAAGATTTAGTTC+GGG + chr2_2:16579086-16579105 Msa0241140:CDS 30.0%
TGAAAGTCTGAAAGATACTA+TGG + chr2_2:16579184-16579203 Msa0241140:CDS 30.0%
!! ATGATTGGTGTCATAATAAG+AGG + chr2_2:16579510-16579529 Msa0241140:CDS 30.0%
!! TGATTGGTGTCATAATAAGA+GGG + chr2_2:16579511-16579530 Msa0241140:CDS 30.0%
! CTTCAACTTTGGAAGAAAAT+GGG + chr2_2:16579576-16579595 Msa0241140:CDS 30.0%
! CCTAAGACAAAAGTTTTCTT+CGG - chr2_2:16579735-16579754 None:intergenic 30.0%
! AAGAAAACTTTTGTCTTAGG+CGG + chr2_2:16579735-16579754 Msa0241140:CDS 30.0%
CTATTGAATCTGAAAGAAAG+AGG + chr2_2:16579761-16579780 Msa0241140:CDS 30.0%
CTTGTCTTTCTTCAATGAAA+AGG - chr2_2:16579792-16579811 None:intergenic 30.0%
! CTTTTCATTGAAGAAAGACA+AGG + chr2_2:16579790-16579809 Msa0241140:CDS 30.0%
!! GACTTCATTCAATTTTGAGA+TGG - chr2_2:16579849-16579868 None:intergenic 30.0%
AAATTGAATGAAGTCCTTGA+TGG + chr2_2:16579854-16579873 Msa0241140:CDS 30.0%
TTGCAGTTTCAAAGATAGAT+TGG + chr2_2:16579919-16579938 Msa0241140:CDS 30.0%
ATCGAGTCAATTATGATTGA+AGG + chr2_2:16580307-16580326 Msa0241140:CDS 30.0%
TCGAGTCAATTATGATTGAA+GGG + chr2_2:16580308-16580327 Msa0241140:CDS 30.0%
AGAAAAGCAAAAGATGGAAT+TGG + chr2_2:16580501-16580520 Msa0241140:CDS 30.0%
AGACAGATTGTCAACAAAAT+TGG + chr2_2:16580554-16580573 Msa0241140:CDS 30.0%
TTGTCAACAAAATTGGATTG+TGG + chr2_2:16580561-16580580 Msa0241140:CDS 30.0%
CATCCATAAATTGTTGACAA+TGG + chr2_2:16580828-16580847 Msa0241140:CDS 30.0%
!!! ACGTGCTTCTAATTTTTTGA+AGG + chr2_2:16581083-16581102 Msa0241140:intron 30.0%
GTTCATATTTGTGTTCAACT+TGG + chr2_2:16581198-16581217 Msa0241140:intron 30.0%
GACATAAGGATGAAGTAAAT+TGG - chr2_2:16581263-16581282 None:intergenic 30.0%
TCATCCTTATGTCAAGAAAA+CGG + chr2_2:16581270-16581289 Msa0241140:intron 30.0%
! AAAACCGTTTTCTTGACATA+AGG - chr2_2:16581277-16581296 None:intergenic 30.0%
! ATATATGGAACCATCTTTTC+AGG + chr2_2:16581363-16581382 Msa0241140:intron 30.0%
! AAAAAGTTCTGATCTTGCAA+AGG + chr2_2:16581478-16581497 Msa0241140:CDS 30.0%
!! AATATGCATTTGCTATGCTA+TGG + chr2_2:16581557-16581576 Msa0241140:intron 30.0%
!! ATATGCATTTGCTATGCTAT+GGG + chr2_2:16581558-16581577 Msa0241140:intron 30.0%
TGGGAACAAGTAAAAATTTG+GGG - chr2_2:16581693-16581712 None:intergenic 30.0%
!! GGCGACACTTATATTTTTAT+GGG - chr2_2:16581712-16581731 None:intergenic 30.0%
!! TGGCGACACTTATATTTTTA+TGG - chr2_2:16581713-16581732 None:intergenic 30.0%
! TAAAAATATAAGTGTCGCCA+TGG + chr2_2:16581713-16581732 Msa0241140:intron 30.0%
ACAGTTAATCGTCAAATCTT+AGG + chr2_2:16581845-16581864 Msa0241140:intron 30.0%
GGTGAAGAAATAATTAGTAC+TGG - chr2_2:16581948-16581967 None:intergenic 30.0%
!! CTTCACCATTCTAATTTGTT+TGG + chr2_2:16581961-16581980 Msa0241140:intron 30.0%
AACAGCCAAACAAATTAGAA+TGG - chr2_2:16581969-16581988 None:intergenic 30.0%
CAACCATATGATTAATTCAC+TGG - chr2_2:16582236-16582255 None:intergenic 30.0%
CAGTGAATTAATCATATGGT+TGG + chr2_2:16582234-16582253 Msa0241140:intron 30.0%
! AATCATATGGTTGGTTCAAA+TGG + chr2_2:16582243-16582262 Msa0241140:intron 30.0%
! ATCATATGGTTGGTTCAAAT+GGG + chr2_2:16582244-16582263 Msa0241140:intron 30.0%
AAAGCAAGTAGTGTTATAGA+AGG + chr2_2:16582295-16582314 Msa0241140:intron 30.0%
! AGATTTGGAATCAATGATCA+CGG + chr2_2:16582327-16582346 Msa0241140:intron 30.0%
! CTTGGTTCACCAAAATTTTA+CGG - chr2_2:16582374-16582393 None:intergenic 30.0%
!! GTAAAATTTTGGTGAACCAA+GGG + chr2_2:16582373-16582392 Msa0241140:intron 30.0%
AAAGGTCAATTACTAGACTT+AGG - chr2_2:16582484-16582503 None:intergenic 30.0%
!!! ATCTTTCAGGTTGATCTTTT+AGG + chr2_2:16582514-16582533 Msa0241140:intron 30.0%
!!! TCTTTCAGGTTGATCTTTTA+GGG + chr2_2:16582515-16582534 Msa0241140:intron 30.0%
GTTGCAATATTGGTGAATAA+TGG - chr2_2:16582594-16582613 None:intergenic 30.0%
CATAATTGAGGTATATGTAG+TGG + chr2_2:16582666-16582685 Msa0241140:intron 30.0%
CGCTGTTTATTATACAATAG+TGG + chr2_2:16582733-16582752 Msa0241140:intron 30.0%
TTCTAATAGAAACTGATGCT+TGG - chr2_2:16582925-16582944 None:intergenic 30.0%
ATCATGGTGTGTGATATAAA+GGG + chr2_2:16582953-16582972 Msa0241140:intron 30.0%
TCTACATTGCATAACAGAAT+GGG + chr2_2:16582984-16583003 Msa0241140:intron 30.0%
TATTGTAAATCCAACAGCTT+AGG + chr2_2:16583166-16583185 Msa0241140:intron 30.0%
ATTGTAAATCCAACAGCTTA+GGG + chr2_2:16583167-16583186 Msa0241140:intron 30.0%
!! TTTGTTGTTGCAAACATGAA+TGG + chr2_2:16583279-16583298 Msa0241140:intron 30.0%
TGATTATGATATAAGACGTG+TGG + chr2_2:16583360-16583379 Msa0241140:intron 30.0%
TGACATTATGATAGTTGTAC+TGG + chr2_2:16583403-16583422 Msa0241140:intron 30.0%
CCAAAACTAACAATAGTAAC+CGG + chr2_2:16583648-16583667 Msa0241140:intron 30.0%
ATTCATTGTCTTCATGAAGA+AGG + chr2_2:16583777-16583796 Msa0241140:intron 30.0%
!! AAACCCGATAAGTATTGATA+AGG + chr2_2:16584002-16584021 Msa0241140:intron 30.0%
AGAAAAATGGAAGACAAATC+AGG + chr2_2:16584260-16584279 Msa0241140:intron 30.0%
GAAAAATGGAAGACAAATCA+GGG + chr2_2:16584261-16584280 Msa0241140:intron 30.0%
GAAAATTACTCTCTCAAACA+AGG - chr2_2:16584594-16584613 None:intergenic 30.0%
TAAGGTCTATTTGGAAGTTT+AGG - chr2_2:16584855-16584874 None:intergenic 30.0%
TGAAACTGCATGAACTATTA+AGG - chr2_2:16584873-16584892 None:intergenic 30.0%
!! ATTACTAGGGTATCCTTTTT+GGG + chr2_2:16584964-16584983 Msa0241140:intron 30.0%
!!! AGTTTGTTTTAGCAAAACAG+TGG + chr2_2:16584998-16585017 Msa0241140:intron 30.0%
GGTAATTTAACAGATAACAC+TGG - chr2_2:16585050-16585069 None:intergenic 30.0%
!! CTTACATAATGTGTTTTAGG+GGG - chr2_2:16585212-16585231 None:intergenic 30.0%
!! CCTTACATAATGTGTTTTAG+GGG - chr2_2:16585213-16585232 None:intergenic 30.0%
! GTGTATAAAGCATTTGTGTA+TGG - chr2_2:16585280-16585299 None:intergenic 30.0%
CTTTATACACTTCACTTAGT+AGG + chr2_2:16585290-16585309 Msa0241140:three_prime_UTR 30.0%
AAAGAGTGAAAGCAAATTCA+TGG - chr2_2:16585346-16585365 None:intergenic 30.0%
GGTGTGAAATAATTGTGATG+CGG - chr2_2:16578165-16578184 None:intergenic 35.0%
! ATCCTTATACCTGTTTTGTG+GGG - chr2_2:16578356-16578375 None:intergenic 35.0%
! TGTTATGAATGGTGGTGAAA+AGG + chr2_2:16578641-16578660 Msa0241140:CDS 35.0%
!! GGTGAAAAGGTTTTTGAGAA+TGG + chr2_2:16578654-16578673 Msa0241140:CDS 35.0%
!! GGTTTTTGAGAATGGTGTTA+AGG + chr2_2:16578662-16578681 Msa0241140:CDS 35.0%
TGAGCACATAATTGAGGAAA+TGG + chr2_2:16578704-16578723 Msa0241140:CDS 35.0%
!! ACGGTTGATTATTTCTAGGA+TGG + chr2_2:16578752-16578771 Msa0241140:CDS 35.0%
GGTGAGTGATTCTGTTATAA+AGG + chr2_2:16578773-16578792 Msa0241140:CDS 35.0%
GAGAATTGCGCAAAAAGAAT+CGG + chr2_2:16578830-16578849 Msa0241140:CDS 35.0%
AGCTAAAATGATGTGGTCTT+CGG + chr2_2:16578905-16578924 Msa0241140:CDS 35.0%
AGATAGATTTATGAAGCCTG+TGG + chr2_2:16578989-16579008 Msa0241140:CDS 35.0%
GATAGATTTATGAAGCCTGT+GGG + chr2_2:16578990-16579009 Msa0241140:CDS 35.0%
! TCAAATTTAAGACTACCCAC+AGG - chr2_2:16579008-16579027 None:intergenic 35.0%
! AAGAAGATTTAGTTCGGGTT+CGG + chr2_2:16579091-16579110 Msa0241140:CDS 35.0%
TCGACATAAATCCATCTTTC+CGG - chr2_2:16579155-16579174 None:intergenic 35.0%
CTCCAGAAGGATAGAAATTA+CGG + chr2_2:16579214-16579233 Msa0241140:CDS 35.0%
ATCCGTAATTTCTATCCTTC+TGG - chr2_2:16579219-16579238 None:intergenic 35.0%
AATTACGGATCAGTTATCGA+AGG + chr2_2:16579229-16579248 Msa0241140:CDS 35.0%
AGTTTCGTTTGGAAATTGAG+CGG + chr2_2:16579285-16579304 Msa0241140:CDS 35.0%
TGGTAATTCGCAATTGTATC+CGG + chr2_2:16579309-16579328 Msa0241140:CDS 35.0%
!!! ACACTGTCTGTTTTTGAAAC+TGG + chr2_2:16579452-16579471 Msa0241140:CDS 35.0%
!!! CACTGTCTGTTTTTGAAACT+GGG + chr2_2:16579453-16579472 Msa0241140:CDS 35.0%
! GCTTCAACTTTGGAAGAAAA+TGG + chr2_2:16579575-16579594 Msa0241140:CDS 35.0%
! CCGAAGAAAACTTTTGTCTT+AGG + chr2_2:16579732-16579751 Msa0241140:CDS 35.0%
! AGAAAACTTTTGTCTTAGGC+GGG + chr2_2:16579736-16579755 Msa0241140:CDS 35.0%
!!! TCAATTTTGAGATGGCATCA+GGG - chr2_2:16579841-16579860 None:intergenic 35.0%
!!! TTCAATTTTGAGATGGCATC+AGG - chr2_2:16579842-16579861 None:intergenic 35.0%
GCAATTTCTCATTTCCATCA+AGG - chr2_2:16579871-16579890 None:intergenic 35.0%
ATCTGAGAATCTTCAACTGA+AGG + chr2_2:16579952-16579971 Msa0241140:CDS 35.0%
CATGCTAGCTGATAAGAATA+AGG + chr2_2:16579976-16579995 Msa0241140:CDS 35.0%
ACAGTGCTCAAGTTTCTAAT+GGG + chr2_2:16580263-16580282 Msa0241140:CDS 35.0%
AATTATGATTGAAGGGCTAC+TGG + chr2_2:16580315-16580334 Msa0241140:CDS 35.0%
ACTTACGTTGAAATCAACAG+TGG + chr2_2:16580432-16580451 Msa0241140:CDS 35.0%
GAAATCAACAGTGGAAGAAA+AGG + chr2_2:16580441-16580460 Msa0241140:CDS 35.0%
GGAACAAGAAAAGCAAAAGA+TGG + chr2_2:16580495-16580514 Msa0241140:CDS 35.0%
TACATGAAGATCTCGAACAA+AGG + chr2_2:16580671-16580690 Msa0241140:CDS 35.0%
ACATGAAGATCTCGAACAAA+GGG + chr2_2:16580672-16580691 Msa0241140:CDS 35.0%
AGTGTATTGAGGCAAAAGAA+AGG + chr2_2:16580770-16580789 Msa0241140:CDS 35.0%
GTGTATTGAGGCAAAAGAAA+GGG + chr2_2:16580771-16580790 Msa0241140:CDS 35.0%
! TGATGGATGACGACATAAAA+TGG - chr2_2:16580999-16581018 None:intergenic 35.0%
! CTAACAGCCTGAAAATTTTG+TGG + chr2_2:16581230-16581249 Msa0241140:intron 35.0%
AGATGGTTCCATATATGACT+TGG - chr2_2:16581359-16581378 None:intergenic 35.0%
TATTTCTCAATCTTGTGGAG+AGG + chr2_2:16581599-16581618 Msa0241140:intron 35.0%
GGAACAAGTAAAAATTTGGG+GGG - chr2_2:16581691-16581710 None:intergenic 35.0%
GGGAACAAGTAAAAATTTGG+GGG - chr2_2:16581692-16581711 None:intergenic 35.0%
ATCAAGAGTCTACACAGAAT+CGG + chr2_2:16581798-16581817 Msa0241140:intron 35.0%
AATCGGACTATGGTTAAATC+TGG + chr2_2:16581815-16581834 Msa0241140:intron 35.0%
TGTTATAAGTGCCAAAAAGG+AGG + chr2_2:16581917-16581936 Msa0241140:intron 35.0%
! ATAATTTTTGCCGCATGTTG+TGG + chr2_2:16582210-16582229 Msa0241140:intron 35.0%
TGGCCAGTGAATTAATCATA+TGG + chr2_2:16582230-16582249 Msa0241140:intron 35.0%
! TCACCAAAATTTTACGGCAT+AGG - chr2_2:16582368-16582387 None:intergenic 35.0%
!! CGTAAAATTTTGGTGAACCA+AGG + chr2_2:16582372-16582391 Msa0241140:intron 35.0%
TGAAAGATCATAGGGTCAAA+AGG - chr2_2:16582502-16582521 None:intergenic 35.0%
! TTTTGACCCTATGATCTTTC+AGG + chr2_2:16582501-16582520 Msa0241140:intron 35.0%
GATCAACCTGAAAGATCATA+GGG - chr2_2:16582510-16582529 None:intergenic 35.0%
AGATCAACCTGAAAGATCAT+AGG - chr2_2:16582511-16582530 None:intergenic 35.0%
!!! CTTTCAGGTTGATCTTTTAG+GGG + chr2_2:16582516-16582535 Msa0241140:intron 35.0%
CAATATTGCAACATTACCCT+GGG + chr2_2:16582602-16582621 Msa0241140:CDS 35.0%
AATATTGCAACATTACCCTG+GGG + chr2_2:16582603-16582622 Msa0241140:CDS 35.0%
AACAAAATATTCTCACCCCA+GGG - chr2_2:16582621-16582640 None:intergenic 35.0%
AAACAAAATATTCTCACCCC+AGG - chr2_2:16582622-16582641 None:intergenic 35.0%
CATCATGGTGTGTGATATAA+AGG + chr2_2:16582952-16582971 Msa0241140:intron 35.0%
CTCTACATTGCATAACAGAA+TGG + chr2_2:16582983-16583002 Msa0241140:intron 35.0%
AAATGGTAAGAACTTCTGCA+TGG - chr2_2:16583543-16583562 None:intergenic 35.0%
AAAGATGGATGAGACCATAA+GGG + chr2_2:16583597-16583616 Msa0241140:intron 35.0%
TAACGGAAAATATGCCCTTA+TGG - chr2_2:16583614-16583633 None:intergenic 35.0%
!! CCGGTTACTATTGTTAGTTT+TGG - chr2_2:16583651-16583670 None:intergenic 35.0%
TTTGCAGATTATCGAGATTC+TGG + chr2_2:16583864-16583883 Msa0241140:intron 35.0%
CTTGTAAGAAGAGAATTGAC+TGG + chr2_2:16583889-16583908 Msa0241140:CDS 35.0%
! AAACTTGTTTAACCCATGAC+CGG + chr2_2:16583922-16583941 Msa0241140:exon 35.0%
! ATCTGAAACTTTCCATGTTC+TGG + chr2_2:16583973-16583992 Msa0241140:intron 35.0%
TCTCACACCTGATTAACTAT+TGG + chr2_2:16584040-16584059 Msa0241140:intron 35.0%
ACCTGATTAACTATTGGATG+TGG + chr2_2:16584046-16584065 Msa0241140:intron 35.0%
TCCACATCCAATAGTTAATC+AGG - chr2_2:16584050-16584069 None:intergenic 35.0%
AACTATTGGATGTGGAGAAT+CGG + chr2_2:16584054-16584073 Msa0241140:intron 35.0%
!! AGGTATATGATAGAGCATTG+TGG + chr2_2:16584410-16584429 Msa0241140:intron 35.0%
ATACAAAATCCCCCTGATTT+GGG - chr2_2:16584753-16584772 None:intergenic 35.0%
AATACAAAATCCCCCTGATT+TGG - chr2_2:16584754-16584773 None:intergenic 35.0%
TCTATTTGGAAGTTTAGGAG+GGG - chr2_2:16584850-16584869 None:intergenic 35.0%
GTCTATTTGGAAGTTTAGGA+GGG - chr2_2:16584851-16584870 None:intergenic 35.0%
AAGGATACCCTAGTAATGTA+AGG - chr2_2:16584961-16584980 None:intergenic 35.0%
!! CATTACTAGGGTATCCTTTT+TGG + chr2_2:16584963-16584982 Msa0241140:intron 35.0%
CTTGAAAAGAGAACCCAAAA+AGG - chr2_2:16584980-16584999 None:intergenic 35.0%
TACACACTCTTAGTAGAACA+AGG - chr2_2:16585071-16585090 None:intergenic 35.0%
!! AATCTTGTAATGGATACAGG+TGG + chr2_2:16585119-16585138 Msa0241140:intron 35.0%
CCCCTAAAACACATTATGTA+AGG + chr2_2:16585210-16585229 Msa0241140:three_prime_UTR 35.0%
TTTGTGTATGGCAAAAAGGA+AGG - chr2_2:16585268-16585287 None:intergenic 35.0%
AGCATTTGTGTATGGCAAAA+AGG - chr2_2:16585272-16585291 None:intergenic 35.0%
ATACTAGAGCCAAACAAACA+AGG - chr2_2:16585322-16585341 None:intergenic 35.0%
AAATAATTGTGATGCGGTGG+TGG - chr2_2:16578159-16578178 None:intergenic 40.0%
GTGAAATAATTGTGATGCGG+TGG - chr2_2:16578162-16578181 None:intergenic 40.0%
GTGTGAATAGTTGGGAAAAG+GGG - chr2_2:16578186-16578205 None:intergenic 40.0%
GGTGTGAATAGTTGGGAAAA+GGG - chr2_2:16578187-16578206 None:intergenic 40.0%
AGGTGTGAATAGTTGGGAAA+AGG - chr2_2:16578188-16578207 None:intergenic 40.0%
! ATTGGGAGGTGTGAATAGTT+GGG - chr2_2:16578194-16578213 None:intergenic 40.0%
! AATTGGGAGGTGTGAATAGT+TGG - chr2_2:16578195-16578214 None:intergenic 40.0%
TGGAAAGAGAGAATCTGGAA+CGG - chr2_2:16578235-16578254 None:intergenic 40.0%
! GCAGGTTGAAGGTTCAAAAA+TGG - chr2_2:16578255-16578274 None:intergenic 40.0%
TTTGAACCTTCAACCTGCAT+TGG + chr2_2:16578257-16578276 Msa0241140:five_prime_UTR 40.0%
TTATGTTGAAGCTCCAATGC+AGG - chr2_2:16578273-16578292 None:intergenic 40.0%
TTTGTGGGGTAAATGAACAC+TGG - chr2_2:16578342-16578361 None:intergenic 40.0%
GTTCATTTACCCCACAAAAC+AGG + chr2_2:16578344-16578363 Msa0241140:five_prime_UTR 40.0%
TACCCCACAAAACAGGTATA+AGG + chr2_2:16578351-16578370 Msa0241140:intron 40.0%
! GTGAATCTTGTTTAGGGAAG+TGG + chr2_2:16578596-16578615 Msa0241140:five_prime_UTR 40.0%
TAGGGAAGTGGAAATGATGA+AGG + chr2_2:16578608-16578627 Msa0241140:exon 40.0%
GAAGTGGAAATGATGAAGGA+GGG + chr2_2:16578612-16578631 Msa0241140:exon 40.0%
AAGTGGAAATGATGAAGGAG+GGG + chr2_2:16578613-16578632 Msa0241140:exon 40.0%
!! GAGGGGTTTGTTGTTATGAA+TGG + chr2_2:16578630-16578649 Msa0241140:CDS 40.0%
!! GGGTTTGTTGTTATGAATGG+TGG + chr2_2:16578633-16578652 Msa0241140:CDS 40.0%
! AAGGATGATGATGAGAGTCT+TGG + chr2_2:16578681-16578700 Msa0241140:CDS 40.0%
TCTTGGTGAGCACATAATTG+AGG + chr2_2:16578698-16578717 Msa0241140:CDS 40.0%
AATTGCGCAAAAAGAATCGG+AGG + chr2_2:16578833-16578852 Msa0241140:CDS 40.0%
AAAAAGAATCGGAGGTCGTT+GGG + chr2_2:16578841-16578860 Msa0241140:CDS 40.0%
CGGATGAAGCTAAAATGATG+TGG + chr2_2:16578898-16578917 Msa0241140:CDS 40.0%
CGTTGTAATGAAACCCATGA+AGG + chr2_2:16578930-16578949 Msa0241140:CDS 40.0%
TGTAATGAAACCCATGAAGG+TGG + chr2_2:16578933-16578952 Msa0241140:CDS 40.0%
!!! GGTACACGTCGTTTTTTAGA+TGG + chr2_2:16578954-16578973 Msa0241140:CDS 40.0%
! ATTTAGTTCGGGTTCGGATT+TGG + chr2_2:16579097-16579116 Msa0241140:CDS 40.0%
CTATGGATTCTTTCTCCAGA+AGG + chr2_2:16579201-16579220 Msa0241140:CDS 40.0%
AGGTAACAACACTTTCTGAG+TGG + chr2_2:16579249-16579268 Msa0241140:CDS 40.0%
! GCTTATTTCTCATGGATCCT+TGG + chr2_2:16579478-16579497 Msa0241140:CDS 40.0%
GCTTTCGACAGATCATTTGT+CGG + chr2_2:16579553-16579572 Msa0241140:CDS 40.0%
!! TCATTTGTCGGCTTCAACTT+TGG + chr2_2:16579565-16579584 Msa0241140:CDS 40.0%
TTGGAAGAAAATGGGAAGCA+CGG + chr2_2:16579584-16579603 Msa0241140:CDS 40.0%
GATTAGCAAGCCTGATAGTT+TGG + chr2_2:16579616-16579635 Msa0241140:CDS 40.0%
AAGCCTGATAGTTTGGATTC+TGG + chr2_2:16579623-16579642 Msa0241140:CDS 40.0%
TCTCATGCACTTGAGATTCA+TGG - chr2_2:16579709-16579728 None:intergenic 40.0%
ACAATCTGTTCAGAAGCTTG+AGG + chr2_2:16580078-16580097 Msa0241140:CDS 40.0%
AGAAGCTTGAGGATGATGTT+GGG + chr2_2:16580089-16580108 Msa0241140:CDS 40.0%
GAAGACTTGCATCTCAAGTA+TGG + chr2_2:16580196-16580215 Msa0241140:CDS 40.0%
! AGAAACTTGAGCACTGTCAA+CGG - chr2_2:16580260-16580279 None:intergenic 40.0%
GACAGTGCTCAAGTTTCTAA+TGG + chr2_2:16580262-16580281 Msa0241140:CDS 40.0%
ACAAGGGGTAACATATGCTT+TGG + chr2_2:16580474-16580493 Msa0241140:CDS 40.0%
TAAACTGTCAAGCTGTTGAG+AGG - chr2_2:16580527-16580546 None:intergenic 40.0%
TGTGGAGAACAGTAAAGAGT+TGG + chr2_2:16580579-16580598 Msa0241140:CDS 40.0%
AGATGCATTGGAGTGTATTG+AGG + chr2_2:16580759-16580778 Msa0241140:CDS 40.0%
AAGGGAAACCAGGAAACAAA+TGG + chr2_2:16580789-16580808 Msa0241140:CDS 40.0%
TTCAAAGGTAATGTCCTTGC+TGG - chr2_2:16581049-16581068 None:intergenic 40.0%
GGTCAGAACCAAGTCATATA+TGG + chr2_2:16581348-16581367 Msa0241140:intron 40.0%
TGCATTCAAGCCTGAAAAGA+TGG - chr2_2:16581376-16581395 None:intergenic 40.0%
TGCACTTAAAACCATGGGAT+TGG + chr2_2:16581433-16581452 Msa0241140:CDS 40.0%
TATTCATCTGCATCTGCCTT+GGG - chr2_2:16581650-16581669 None:intergenic 40.0%
AGATGCAGATGAATAGGTGT+GGG + chr2_2:16581655-16581674 Msa0241140:intron 40.0%
!!! TACTGGCTTATCCTCCTTTT+TGG - chr2_2:16581931-16581950 None:intergenic 40.0%
TTCAAATGGGTCGAATTGTG+AGG + chr2_2:16582257-16582276 Msa0241140:intron 40.0%
CGAATTGTGAGGATACATCA+AGG + chr2_2:16582268-16582287 Msa0241140:intron 40.0%
GATCACGGTATCAGTATATC+AGG + chr2_2:16582342-16582361 Msa0241140:intron 40.0%
! AGGCCTATGCCGTAAAATTT+TGG + chr2_2:16582362-16582381 Msa0241140:intron 40.0%
! CAAGTTGGGTATTAAACCCT+TGG - chr2_2:16582392-16582411 None:intergenic 40.0%
CTCTTCTTAGACTCCTTGAA+AGG + chr2_2:16582551-16582570 Msa0241140:CDS 40.0%
GTGCAACGTATATCCTTTCA+AGG - chr2_2:16582567-16582586 None:intergenic 40.0%
CCAGGGTAATGTTGCAATAT+TGG - chr2_2:16582604-16582623 None:intergenic 40.0%
CCAATATTGCAACATTACCC+TGG + chr2_2:16582601-16582620 Msa0241140:CDS 40.0%
!! TACTCTTTGGGCTTTTTGGT+TGG - chr2_2:16582810-16582829 None:intergenic 40.0%
! TGTGTACTCTTTGGGCTTTT+TGG - chr2_2:16582814-16582833 None:intergenic 40.0%
TAATATAACCAACTGCGGTG+TGG + chr2_2:16583013-16583032 Msa0241140:intron 40.0%
! AAAGTATCAGGGCAATTGAG+AGG - chr2_2:16583119-16583138 None:intergenic 40.0%
AATGGTAATTCGTCATCCCA+TGG + chr2_2:16583297-16583316 Msa0241140:intron 40.0%
CATTTCCGTGTTCTTTCCAT+GGG - chr2_2:16583316-16583335 None:intergenic 40.0%
TCATTTCCGTGTTCTTTCCA+TGG - chr2_2:16583317-16583336 None:intergenic 40.0%
!! TGGCTTTGTAGAACTAGGAA+GGG + chr2_2:16583380-16583399 Msa0241140:intron 40.0%
!! TGTACTGGCCGTATTTGTTT+TGG + chr2_2:16583418-16583437 Msa0241140:intron 40.0%
AGAGACAATTCTTAGCCGAA+TGG - chr2_2:16583489-16583508 None:intergenic 40.0%
GAAAGATGGATGAGACCATA+AGG + chr2_2:16583596-16583615 Msa0241140:intron 40.0%
TGGATACACACAAGCTGTAA+CGG - chr2_2:16583631-16583650 None:intergenic 40.0%
TTGCAACATAGGTTTGGAGA+GGG + chr2_2:16583673-16583692 Msa0241140:intron 40.0%
! AACTTGTTTAACCCATGACC+GGG + chr2_2:16583923-16583942 Msa0241140:exon 40.0%
GGGTTTATGAATCCAGAACA+TGG - chr2_2:16583988-16584007 None:intergenic 40.0%
TGGAGAATCGGAAGTAACTT+AGG + chr2_2:16584066-16584085 Msa0241140:intron 40.0%
GGAGAATCGGAAGTAACTTA+GGG + chr2_2:16584067-16584086 Msa0241140:intron 40.0%
GGAAGACAAATCAGGGAAAA+AGG + chr2_2:16584268-16584287 Msa0241140:intron 40.0%
! GCTTGGTTGTTGTTGTTGAA+GGG + chr2_2:16584475-16584494 Msa0241140:intron 40.0%
TAGAAAGTAATTGGACCCTG+AGG + chr2_2:16584511-16584530 Msa0241140:intron 40.0%
ACTCTCTCAAACAAGGTGAA+AGG - chr2_2:16584587-16584606 None:intergenic 40.0%
! TACAAAATCCCCCTGATTTG+GGG - chr2_2:16584752-16584771 None:intergenic 40.0%
AAAAGGATGGAGAAAGTGGA+AGG - chr2_2:16584810-16584829 None:intergenic 40.0%
GGTCTATTTGGAAGTTTAGG+AGG - chr2_2:16584852-16584871 None:intergenic 40.0%
GCGATGACATGGTTCATAAA+GGG - chr2_2:16584933-16584952 None:intergenic 40.0%
TGCGATGACATGGTTCATAA+AGG - chr2_2:16584934-16584953 None:intergenic 40.0%
! GCAGTAGCCTTACATTACTA+GGG + chr2_2:16584951-16584970 Msa0241140:intron 40.0%
!! GCTAGTGATGATTTGTTTGC+TGG + chr2_2:16585176-16585195 Msa0241140:three_prime_UTR 40.0%
! AAGAGAGAATCTGGAACGGT+GGG - chr2_2:16578231-16578250 None:intergenic 45.0%
! AAAGAGAGAATCTGGAACGG+TGG - chr2_2:16578232-16578251 None:intergenic 45.0%
GGAAGTGGAAATGATGAAGG+AGG + chr2_2:16578611-16578630 Msa0241140:exon 45.0%
GGGTATGGTTAATGCTGTTG+AGG + chr2_2:16578794-16578813 Msa0241140:CDS 45.0%
GGTTAATGCTGTTGAGGAAC+AGG + chr2_2:16578800-16578819 Msa0241140:CDS 45.0%
TAATGCTGTTGAGGAACAGG+CGG + chr2_2:16578803-16578822 Msa0241140:CDS 45.0%
CAAAAAGAATCGGAGGTCGT+TGG + chr2_2:16578840-16578859 Msa0241140:CDS 45.0%
GCAGTTGAGCCAACTCAAAA+AGG + chr2_2:16579037-16579056 Msa0241140:CDS 45.0%
!! GGTTCGGATTTGGTTGGTTT+AGG + chr2_2:16579107-16579126 Msa0241140:CDS 45.0%
!! TCGGATTTGGTTGGTTTAGG+TGG + chr2_2:16579110-16579129 Msa0241140:CDS 45.0%
TGGTTTAGGTGGTATTCTGC+AGG + chr2_2:16579121-16579140 Msa0241140:CDS 45.0%
TATTCTGCAGGAGAATGTGC+CGG + chr2_2:16579133-16579152 Msa0241140:CDS 45.0%
AACAACACTTTCTGAGTGGC+AGG + chr2_2:16579253-16579272 Msa0241140:CDS 45.0%
TCGTTTGGAAATTGAGCGGA+TGG + chr2_2:16579289-16579308 Msa0241140:CDS 45.0%
AGAGATCTCAAGTTTGCGTC+AGG + chr2_2:16579409-16579428 Msa0241140:CDS 45.0%
CTCAAGTTTGCGTCAGGATT+TGG + chr2_2:16579415-16579434 Msa0241140:CDS 45.0%
! ACTGGGACGCTTATTTCTCA+TGG + chr2_2:16579470-16579489 Msa0241140:CDS 45.0%
CCAATCATCAGTATGCTCCA+AGG - chr2_2:16579498-16579517 None:intergenic 45.0%
CCTTGGAGCATACTGATGAT+TGG + chr2_2:16579495-16579514 Msa0241140:CDS 45.0%
TCGAAAGCTTCAAGTGGACA+TGG - chr2_2:16579541-16579560 None:intergenic 45.0%
GATCTGTCGAAAGCTTCAAG+TGG - chr2_2:16579547-16579566 None:intergenic 45.0%
GAGCCAGAATCCAAACTATC+AGG - chr2_2:16579629-16579648 None:intergenic 45.0%
!! TTTGGATTCTGGCTCTCTGA+AGG + chr2_2:16579634-16579653 Msa0241140:CDS 45.0%
TTCTCAGCTTTCTGCTGCTA+TGG + chr2_2:16580015-16580034 Msa0241140:CDS 45.0%
TCTCAGCTTTCTGCTGCTAT+GGG + chr2_2:16580016-16580035 Msa0241140:CDS 45.0%
CAGAAGCTTGAGGATGATGT+TGG + chr2_2:16580088-16580107 Msa0241140:CDS 45.0%
GAAGCTTGAGGATGATGTTG+GGG + chr2_2:16580090-16580109 Msa0241140:CDS 45.0%
! TGCTCAAGTTTCTAATGGGC+TGG + chr2_2:16580267-16580286 Msa0241140:CDS 45.0%
!! TTTGTTGTTCTCGGCAGCTT+TGG - chr2_2:16580398-16580417 None:intergenic 45.0%
AAACCTAGTTGCAGCAGCAA+AGG + chr2_2:16580615-16580634 Msa0241140:CDS 45.0%
TTTCCTTTGCTGCTGCAACT+AGG - chr2_2:16580621-16580640 None:intergenic 45.0%
AGGCAAAAGAAAGGGAAACC+AGG + chr2_2:16580779-16580798 Msa0241140:CDS 45.0%
! GGTTGACTCCATTTGTTTCC+TGG - chr2_2:16580800-16580819 None:intergenic 45.0%
AGCCAGTGCACTTAAAACCA+TGG + chr2_2:16581427-16581446 Msa0241140:CDS 45.0%
GCCAGTGCACTTAAAACCAT+GGG + chr2_2:16581428-16581447 Msa0241140:CDS 45.0%
!!! TCCCATGGTTTTAAGTGCAC+TGG - chr2_2:16581432-16581451 None:intergenic 45.0%
TTGCTTGTACACCAATCCCA+TGG - chr2_2:16581447-16581466 None:intergenic 45.0%
CTATTCATCTGCATCTGCCT+TGG - chr2_2:16581651-16581670 None:intergenic 45.0%
CAAGGCAGATGCAGATGAAT+AGG + chr2_2:16581649-16581668 Msa0241140:intron 45.0%
CAGATGCAGATGAATAGGTG+TGG + chr2_2:16581654-16581673 Msa0241140:intron 45.0%
GATGCAGATGAATAGGTGTG+GGG + chr2_2:16581656-16581675 Msa0241140:intron 45.0%
ATGCAGATGAATAGGTGTGG+GGG + chr2_2:16581657-16581676 Msa0241140:intron 45.0%
TGTAGACTCTTGATCGCTGA+GGG - chr2_2:16581792-16581811 None:intergenic 45.0%
GTCTACACAGAATCGGACTA+TGG + chr2_2:16581805-16581824 Msa0241140:intron 45.0%
CGGACTATGGTTAAATCTGG+TGG + chr2_2:16581818-16581837 Msa0241140:intron 45.0%
AATTCACTGGCCACAACATG+CGG - chr2_2:16582223-16582242 None:intergenic 45.0%
CTCATTTACTTCCCTGAGTC+CGG - chr2_2:16582899-16582918 None:intergenic 45.0%
GGTGTGTGATATAAAGGGTG+AGG + chr2_2:16582958-16582977 Msa0241140:intron 45.0%
TATCAGTGACCCTAAGCTGT+TGG - chr2_2:16583179-16583198 None:intergenic 45.0%
GTCATCCCATGGAAAGAACA+CGG + chr2_2:16583308-16583327 Msa0241140:intron 45.0%
!! ACGTGTGGCTTTGTAGAACT+AGG + chr2_2:16583375-16583394 Msa0241140:intron 45.0%
!! GTGGCTTTGTAGAACTAGGA+AGG + chr2_2:16583379-16583398 Msa0241140:intron 45.0%
CAATTCTTAGCCGAATGGCA+GGG - chr2_2:16583484-16583503 None:intergenic 45.0%
ACAATTCTTAGCCGAATGGC+AGG - chr2_2:16583485-16583504 None:intergenic 45.0%
!! AGTAACCGGTGTTGCAACAT+AGG + chr2_2:16583662-16583681 Msa0241140:intron 45.0%
CCAAACCTATGTTGCAACAC+CGG - chr2_2:16583670-16583689 None:intergenic 45.0%
GTTGCAACATAGGTTTGGAG+AGG + chr2_2:16583672-16583691 Msa0241140:intron 45.0%
AATTAGGAGGTGGCGACATT+TGG + chr2_2:16583711-16583730 Msa0241140:intron 45.0%
! AGAGTGTCTGTCAACTTACC+CGG - chr2_2:16583944-16583963 None:intergenic 45.0%
!! TAACTTAGGGAGCACTGTCA+TGG + chr2_2:16584080-16584099 Msa0241140:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr2_2:16584459-16584478 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr2_2:16584460-16584479 None:intergenic 45.0%
! GGCTTGGTTGTTGTTGTTGA+AGG + chr2_2:16584474-16584493 Msa0241140:intron 45.0%
! AGTGCATAGGAGGAGGATTT+TGG - chr2_2:16584719-16584738 None:intergenic 45.0%
! GAACCAAGAAAGTGCATAGG+AGG - chr2_2:16584729-16584748 None:intergenic 45.0%
TTTCTTGGTTCCCCCAAATC+AGG + chr2_2:16584738-16584757 Msa0241140:intron 45.0%
TTCTTGGTTCCCCCAAATCA+GGG + chr2_2:16584739-16584758 Msa0241140:intron 45.0%
!! ACAAAATCCCCCTGATTTGG+GGG - chr2_2:16584751-16584770 None:intergenic 45.0%
GAAGGAATAGAGGACTTAGG+TGG - chr2_2:16584792-16584811 None:intergenic 45.0%
GTGGAAGGAATAGAGGACTT+AGG - chr2_2:16584795-16584814 None:intergenic 45.0%
GGAGAAAGTGGAAGGAATAG+AGG - chr2_2:16584802-16584821 None:intergenic 45.0%
GGAGAAAAGGATGGAGAAAG+TGG - chr2_2:16584814-16584833 None:intergenic 45.0%
! CGCAGTAGCCTTACATTACT+AGG + chr2_2:16584950-16584969 Msa0241140:intron 45.0%
!! AGGAGACAGCCTTGTTTGTT+TGG + chr2_2:16585310-16585329 Msa0241140:three_prime_UTR 45.0%
!! ATGCGGTGGTGGCGTTTTTA+GGG - chr2_2:16578148-16578167 None:intergenic 50.0%
! GAAGCTCCAATGCAGGTTGA+AGG - chr2_2:16578266-16578285 None:intergenic 50.0%
ACGACGTGTACCACCTTCAT+GGG - chr2_2:16578946-16578965 None:intergenic 50.0%
AACGACGTGTACCACCTTCA+TGG - chr2_2:16578947-16578966 None:intergenic 50.0%
! AGTTCGGGTTCGGATTTGGT+TGG + chr2_2:16579101-16579120 Msa0241140:CDS 50.0%
AGGAGAATGTGCCGGAAAGA+TGG + chr2_2:16579141-16579160 Msa0241140:CDS 50.0%
AACACTTTCTGAGTGGCAGG+AGG + chr2_2:16579256-16579275 Msa0241140:CDS 50.0%
TTGTATCCGGAGTTTGCAGC+AGG + chr2_2:16579322-16579341 Msa0241140:CDS 50.0%
CAATCTCCTGCTGCAAACTC+CGG - chr2_2:16579331-16579350 None:intergenic 50.0%
GTCACAGCAACAACTGACTG+AGG + chr2_2:16580045-16580064 Msa0241140:CDS 50.0%
!! GTGCACTGGCTTTGTTCTTG+AGG - chr2_2:16581418-16581437 None:intergenic 50.0%
TCTTGCAAAGGCTGAAGCAG+AGG + chr2_2:16581490-16581509 Msa0241140:CDS 50.0%
CTTGGGTCACATGAGCACAA+GGG - chr2_2:16581633-16581652 None:intergenic 50.0%
TGCAGATGAATAGGTGTGGG+GGG + chr2_2:16581658-16581677 Msa0241140:intron 50.0%
GTGTAGACTCTTGATCGCTG+AGG - chr2_2:16581793-16581812 None:intergenic 50.0%
!! GGTTGATCTTTTAGGGGACG+AGG + chr2_2:16582522-16582541 Msa0241140:intron 50.0%
TTTACTTCCCTGAGTCCGGA+GGG - chr2_2:16582895-16582914 None:intergenic 50.0%
ATTTACTTCCCTGAGTCCGG+AGG - chr2_2:16582896-16582915 None:intergenic 50.0%
!! CCGGTGTTGCAACATAGGTT+TGG + chr2_2:16583667-16583686 Msa0241140:intron 50.0%
CTGTCAACTTACCCGGTCAT+GGG - chr2_2:16583937-16583956 None:intergenic 50.0%
TCTGTCAACTTACCCGGTCA+TGG - chr2_2:16583938-16583957 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr2_2:16584455-16584474 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr2_2:16584461-16584480 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr2_2:16584458-16584477 Msa0241140:intron 50.0%
AACTCCTAGACGGAACCTCA+GGG - chr2_2:16584529-16584548 None:intergenic 50.0%
AAACTCCTAGACGGAACCTC+AGG - chr2_2:16584530-16584549 None:intergenic 50.0%
TGAGGTTCCGTCTAGGAGTT+TGG + chr2_2:16584529-16584548 Msa0241140:intron 50.0%
GTTCCGTCTAGGAGTTTGGA+GGG + chr2_2:16584533-16584552 Msa0241140:intron 50.0%
TTCCGTCTAGGAGTTTGGAG+GGG + chr2_2:16584534-16584553 Msa0241140:intron 50.0%
! GCATAGGAGGAGGATTTTGG+AGG - chr2_2:16584716-16584735 None:intergenic 50.0%
! CCAAGAAAGTGCATAGGAGG+AGG - chr2_2:16584726-16584745 None:intergenic 50.0%
CCTCCTCCTATGCACTTTCT+TGG + chr2_2:16584723-16584742 Msa0241140:intron 50.0%
! GGGGAACCAAGAAAGTGCAT+AGG - chr2_2:16584732-16584751 None:intergenic 50.0%
TCTTGGTTCCCCCAAATCAG+GGG + chr2_2:16584740-16584759 Msa0241140:intron 50.0%
!! GTGGGCTTTGGAGAAAAGGA+TGG - chr2_2:16584823-16584842 None:intergenic 50.0%
!! AGAGGTGGGCTTTGGAGAAA+AGG - chr2_2:16584827-16584846 None:intergenic 50.0%
AAGTTTAGGAGGGGAGAGGT+GGG - chr2_2:16584841-16584860 None:intergenic 50.0%
TTGGAAGTTTAGGAGGGGAG+AGG - chr2_2:16584845-16584864 None:intergenic 50.0%
GTAAGGCTACTGCGATGACA+TGG - chr2_2:16584944-16584963 None:intergenic 50.0%
!! GATGCGGTGGTGGCGTTTTT+AGG - chr2_2:16578149-16578168 None:intergenic 55.0%
GGAGGAGCAGGAGTTTCGTT+TGG + chr2_2:16579274-16579293 Msa0241140:CDS 55.0%
CCTTGGGTCACATGAGCACA+AGG - chr2_2:16581634-16581653 None:intergenic 55.0%
CCTTGTGCTCATGTGACCCA+AGG + chr2_2:16581631-16581650 Msa0241140:intron 55.0%
TTACTTCCCTGAGTCCGGAG+GGG - chr2_2:16582894-16582913 None:intergenic 55.0%
AATGGCAGGGTTGAGCTGGT+AGG - chr2_2:16583471-16583490 None:intergenic 55.0%
ACCAGCTCAACCCTGCCATT+CGG + chr2_2:16583471-16583490 Msa0241140:intron 55.0%
TAGGAGGTGGCGACATTTGG+CGG + chr2_2:16583714-16583733 Msa0241140:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr2_2:16584447-16584466 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr2_2:16584446-16584465 Msa0241140:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr2_2:16584447-16584466 Msa0241140:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr2_2:16584453-16584472 Msa0241140:intron 55.0%
GGTTCCGTCTAGGAGTTTGG+AGG + chr2_2:16584532-16584551 Msa0241140:intron 55.0%
TCCGTCTAGGAGTTTGGAGG+GGG + chr2_2:16584535-16584554 Msa0241140:intron 55.0%
CTTGGTTCCCCCAAATCAGG+GGG + chr2_2:16584741-16584760 Msa0241140:intron 55.0%
GAAGTTTAGGAGGGGAGAGG+TGG - chr2_2:16584842-16584861 None:intergenic 55.0%
TTCTGAGTGGCAGGAGGAGC+AGG + chr2_2:16579262-16579281 Msa0241140:CDS 60.0%
TGGGAATCTTGACCCCCCTC+CGG + chr2_2:16582877-16582896 Msa0241140:intron 60.0%
TACTTCCCTGAGTCCGGAGG+GGG - chr2_2:16582893-16582912 None:intergenic 60.0%
CCTGATTGCCACACCGCAGT+TGG - chr2_2:16583024-16583043 None:intergenic 60.0%
CCAACTGCGGTGTGGCAATC+AGG + chr2_2:16583021-16583040 Msa0241140:intron 60.0%
TGGACCCTGAGGTTCCGTCT+AGG + chr2_2:16584522-16584541 Msa0241140:intron 60.0%
CCCCCCTCCAAACTCCTAGA+CGG - chr2_2:16584539-16584558 None:intergenic 60.0%
CCGTCTAGGAGTTTGGAGGG+GGG + chr2_2:16584536-16584555 Msa0241140:intron 60.0%
CGTCTAGGAGTTTGGAGGGG+GGG + chr2_2:16584537-16584556 Msa0241140:intron 60.0%
GTCTAGGAGTTTGGAGGGGG+GGG + chr2_2:16584538-16584557 Msa0241140:intron 60.0%
TCTAGGAGTTTGGAGGGGGG+GGG + chr2_2:16584539-16584558 Msa0241140:intron 60.0%
TTGACCCCCCTCCGGACTCA+GGG + chr2_2:16582885-16582904 Msa0241140:intron 65.0%
ACTTCCCTGAGTCCGGAGGG+GGG - chr2_2:16582892-16582911 None:intergenic 65.0%
GCAGGGTTGAGCTGGTAGGC+TGG - chr2_2:16583467-16583486 None:intergenic 65.0%
GCCGAATGGCAGGGTTGAGC+TGG - chr2_2:16583475-16583494 None:intergenic 65.0%
CTAGGAGTTTGGAGGGGGGG+GGG + chr2_2:16584540-16584559 Msa0241140:intron 65.0%
TAGGAGTTTGGAGGGGGGGG+GGG + chr2_2:16584541-16584560 Msa0241140:intron 65.0%
! AGGAGGGGAGAGGTGGGCTT+TGG - chr2_2:16584835-16584854 None:intergenic 65.0%
CTTGACCCCCCTCCGGACTC+AGG + chr2_2:16582884-16582903 Msa0241140:intron 70.0%
AGGAGTTTGGAGGGGGGGGG+GGG + chr2_2:16584542-16584561 Msa0241140:intron 70.0%
GGAGTTTGGAGGGGGGGGGG+GGG + chr2_2:16584543-16584562 Msa0241140:intron 75.0%
GAGTTTGGAGGGGGGGGGGG+GGG + chr2_2:16584544-16584563 Msa0241140:intron 75.0%
AGTTTGGAGGGGGGGGGGGG+GGG + chr2_2:16584545-16584564 Msa0241140:intron 75.0%
! GTTTGGAGGGGGGGGGGGGG+GGG + chr2_2:16584546-16584565 Msa0241140:intron 80.0%
! TTTGGAGGGGGGGGGGGGGG+GGG + chr2_2:16584547-16584566 Msa0241140:intron 80.0%
! TTGGAGGGGGGGGGGGGGGG+GGG + chr2_2:16584548-16584567 Msa0241140:intron 85.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 16578096 16585567 16578096 ID=Msa0241140;Name=Msa0241140
chr2_2 mRNA 16578096 16585567 16578096 ID=Msa0241140-mRNA-1;Parent=Msa0241140;Name=Msa0241140-mRNA-1;_AED=0.03;_eAED=0.03;_QI=333|1|1|1|0.6|0.33|6|441|857
chr2_2 exon 16578096 16578365 16578096 ID=Msa0241140-mRNA-1:exon:6775;Parent=Msa0241140-mRNA-1
chr2_2 exon 16578558 16580902 16578558 ID=Msa0241140-mRNA-1:exon:6776;Parent=Msa0241140-mRNA-1
chr2_2 exon 16581385 16581511 16581385 ID=Msa0241140-mRNA-1:exon:6777;Parent=Msa0241140-mRNA-1
chr2_2 exon 16582523 16582624 16582523 ID=Msa0241140-mRNA-1:exon:6778;Parent=Msa0241140-mRNA-1
chr2_2 exon 16583871 16583944 16583871 ID=Msa0241140-mRNA-1:exon:6779;Parent=Msa0241140-mRNA-1
chr2_2 exon 16585138 16585567 16585138 ID=Msa0241140-mRNA-1:exon:6780;Parent=Msa0241140-mRNA-1
chr2_2 five_prime_UTR 16578096 16578365 16578096 ID=Msa0241140-mRNA-1:five_prime_utr;Parent=Msa0241140-mRNA-1
chr2_2 five_prime_UTR 16578558 16578620 16578558 ID=Msa0241140-mRNA-1:five_prime_utr;Parent=Msa0241140-mRNA-1
chr2_2 CDS 16578621 16580902 16578621 ID=Msa0241140-mRNA-1:cds;Parent=Msa0241140-mRNA-1
chr2_2 CDS 16581385 16581511 16581385 ID=Msa0241140-mRNA-1:cds;Parent=Msa0241140-mRNA-1
chr2_2 CDS 16582523 16582624 16582523 ID=Msa0241140-mRNA-1:cds;Parent=Msa0241140-mRNA-1
chr2_2 CDS 16583871 16583933 16583871 ID=Msa0241140-mRNA-1:cds;Parent=Msa0241140-mRNA-1
chr2_2 three_prime_UTR 16583934 16583944 16583934 ID=Msa0241140-mRNA-1:three_prime_utr;Parent=Msa0241140-mRNA-1
chr2_2 three_prime_UTR 16585138 16585567 16585138 ID=Msa0241140-mRNA-1:three_prime_utr;Parent=Msa0241140-mRNA-1
Gene Sequence

>Msa0241140

ATGATGAAGGAGGGGTTTGTTGTTATGAATGGTGGTGAAAAGGTTTTTGAGAATGGTGTTAAGGATGATGATGAGAGTCTTGGTGAGCACATAATTGAGGAAATGGAGTCATTTTTTGATGATATCGATGAACGGTTGATTATTTCTAGGATGGTGAGTGATTCTGTTATAAAGGGTATGGTTAATGCTGTTGAGGAACAGGCGGCTGAGAGAATTGCGCAAAAAGAATCGGAGGTCGTTGGGTTGAAGAAAAAGCTAAGTAGTTTATGTGTTGGTTCGGATGAAGCTAAAATGATGTGGTCTTCGGTGCGTTGTAATGAAACCCATGAAGGTGGTACACGTCGTTTTTTAGATGGTGTTATGGAGAAAGATAGATTTATGAAGCCTGTGGGTAGTCTTAAATTTGAGATACATGAGCAGTTGAGCCAACTCAAAAAGGAAATAAATAAAATTAGAGGACTTAGTTCAACAAGAAGATTTAGTTCGGGTTCGGATTTGGTTGGTTTAGGTGGTATTCTGCAGGAGAATGTGCCGGAAAGATGGATTTATGTCGATAAAGCTTTTGAAAGTCTGAAAGATACTATGGATTCTTTCTCCAGAAGGATAGAAATTACGGATCAGTTATCGAAGGTAACAACACTTTCTGAGTGGCAGGAGGAGCAGGAGTTTCGTTTGGAAATTGAGCGGATGGTAATTCGCAATTGTATCCGGAGTTTGCAGCAGGAGATTGAACGAAAATTATGTGAAGTTTGTGAATCTGAAAGTAGAAATAGTTTTAACCAATATAAAGAGATCTCAAGTTTGCGTCAGGATTTGGATTCAATTTTTAGAACACTGTCTGTTTTTGAAACTGGGACGCTTATTTCTCATGGATCCTTGGAGCATACTGATGATTGGTGTCATAATAAGAGGGCAGACCATGTCCACTTGAAGCTTTCGACAGATCATTTGTCGGCTTCAACTTTGGAAGAAAATGGGAAGCACGGCGATTCAAAGATTAGCAAGCCTGATAGTTTGGATTCTGGCTCTCTGAAGGACATGTCTAAAGATGATTTGATTACTTATATAACTAAGATGAGAAGAAACCATGAATCTCAAGTGCATGAGAAGACCGAAGAAAACTTTTGTCTTAGGCGGGAACTATTGAATCTGAAAGAAAGAGGTTCTTCCTTTTCATTGAAGAAAGACAAGGACTTTGATTTGTTGAAGAAAAAAATCCCTGATGCCATCTCAAAATTGAATGAAGTCCTTGATGGAAATGAGAAATTGCGTCAATTCAGTGAGAACATTGAATCTCTTTGCAGTTTCAAAGATAGATTGGATTTCTTACAATCTGAGAATCTTCAACTGAAGGACATGCTAGCTGATAAGAATAAGGAAATTAAGAGTCTATCTTCTCAGCTTTCTGCTGCTATGGGAAAATTGTCACAGCAACAACTGACTGAGGAAAATTTGTTACAATCTGTTCAGAAGCTTGAGGATGATGTTGGGGATGCACATGTTGAAGCTTCAGTTATTCAAGACGTGTATAAATGTCTCTTTAAAGATATGGAAAGTGAATGTAGATTCATTACTGAAGACTTGCATCTCAAGTATGGTTTTATGCAAGAAATGTATGAAGCAATGTTGAAAGATACCGTTGACAGTGCTCAAGTTTCTAATGGGCTGGAAATAGAAGAAGCAAATATCGAGTCAATTATGATTGAAGGGCTACTGGATATTAATCAAATTATATTCAAAGGAGCTTTGGTAGATGCAGACGAAGCATTAAAATCCAAAGCTGCCGAGAACAACAAACTAAAATATGAAATACTTACGTTGAAATCAACAGTGGAAGAAAAGGAGAATTTATTACAAGGGGTAACATATGCTTTGGAACAAGAAAAGCAAAAGATGGAATTGGCCTCTCAACAGCTTGACAGTTTAAGAACTGAGACAGATTGTCAACAAAATTGGATTGTGGAGAACAGTAAAGAGTTGGATGTTACTAAGCGAAACCTAGTTGCAGCAGCAAAGGAAATTGAAGAATACAAGGAGCAAATGCAGAAGTTACATGAAGATCTCGAACAAAGGGTGAATGAGCTTAGAGAAGTTGATAAAGAAAGAAGAGAGCTTTGTGCTGTTACAAAAAATCATCAAGATGCATTGGAGTGTATTGAGGCAAAAGAAAGGGAAACCAGGAAACAAATGGAGTCAACCATTAATCTCATCCATAAATTGTTGACAATGGTTAACGATGTAGAAGCTAGTGTAAATGAAGATGTTTCAAGAAATTGTATGAGGCTTGAATGCATGAGTTCTGAGTTCTCTTTCCTCAAGAACAAAGCCAGTGCACTTAAAACCATGGGATTGGTGTACAAGCAAAAGTTTGAAACAAAAAGTTCTGATCTTGCAAAGGCTGAAGCAGAGGTTGATCTTTTAGGGGACGAGGTAGATACTCTTCTTAGACTCCTTGAAAGGATATACGTTGCACTTGACCATTATTCACCAATATTGCAACATTACCCTGGGATTATCGAGATTCTGGAGCTTGTAAGAAGAGAATTGACTGGAGAGTCTAGAAAACTTGTTTAA

Protein sequence

>Msa0241140

MMKEGFVVMNGGEKVFENGVKDDDESLGEHIIEEMESFFDDIDERLIISRMVSDSVIKGMVNAVEEQAAERIAQKESEVVGLKKKLSSLCVGSDEAKMMWSSVRCNETHEGGTRRFLDGVMEKDRFMKPVGSLKFEIHEQLSQLKKEINKIRGLSSTRRFSSGSDLVGLGGILQENVPERWIYVDKAFESLKDTMDSFSRRIEITDQLSKVTTLSEWQEEQEFRLEIERMVIRNCIRSLQQEIERKLCEVCESESRNSFNQYKEISSLRQDLDSIFRTLSVFETGTLISHGSLEHTDDWCHNKRADHVHLKLSTDHLSASTLEENGKHGDSKISKPDSLDSGSLKDMSKDDLITYITKMRRNHESQVHEKTEENFCLRRELLNLKERGSSFSLKKDKDFDLLKKKIPDAISKLNEVLDGNEKLRQFSENIESLCSFKDRLDFLQSENLQLKDMLADKNKEIKSLSSQLSAAMGKLSQQQLTEENLLQSVQKLEDDVGDAHVEASVIQDVYKCLFKDMESECRFITEDLHLKYGFMQEMYEAMLKDTVDSAQVSNGLEIEEANIESIMIEGLLDINQIIFKGALVDADEALKSKAAENNKLKYEILTLKSTVEEKENLLQGVTYALEQEKQKMELASQQLDSLRTETDCQQNWIVENSKELDVTKRNLVAAAKEIEEYKEQMQKLHEDLEQRVNELREVDKERRELCAVTKNHQDALECIEAKERETRKQMESTINLIHKLLTMVNDVEASVNEDVSRNCMRLECMSSEFSFLKNKASALKTMGLVYKQKFETKSSDLAKAEAEVDLLGDEVDTLLRLLERIYVALDHYSPILQHYPGIIEILELVRRELTGESRKLV*