AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0481030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0481030 MtrunA17_Chr3g0133981 97.893 807 17 0 1 807 1 807 0.0 1626
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0481030 AT5G42920.2 56.715 834 320 11 1 809 1 818 0.0 867
Msa0481030 AT5G42920.1 57.163 712 276 9 116 809 1 701 0.0 742
Msa0481030 AT1G45233.2 58.643 457 171 4 32 488 14 452 0.0 536

Find 190 sgRNAs with CRISPR-Local

Find 423 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAAGCTTGAGCATCTTTC+AGG 0.161581 3_3:-86782972 None:intergenic
GAACAAAACAACAGCGAAAA+TGG 0.203576 3_3:+86781220 Msa0481030:exon
TAACTTACCAGTGTCCTTAT+TGG 0.208665 3_3:-86783007 None:intergenic
GCCTGTTAGTGGTGGGTTCT+TGG 0.218520 3_3:+86786536 Msa0481030:CDS
TCATTATCTTAAAGCTATTA+AGG 0.227514 3_3:+86781685 Msa0481030:CDS
GTGAACATCATCTTCCAATT+TGG 0.244867 3_3:-86784288 None:intergenic
GCACACTCCCTTGTGCAAAT+TGG 0.262600 3_3:+86785378 Msa0481030:CDS
TACGTTGCAGCTTCATAATT+TGG 0.262615 3_3:+86781649 Msa0481030:CDS
ACCGAATCCTTTATATCCTT+TGG 0.278208 3_3:-86781779 None:intergenic
TGATCAAACTTAGTCCTCTT+TGG 0.279549 3_3:-86785577 None:intergenic
TCTCTTTCGTGGATGGATTC+TGG 0.284635 3_3:+86785784 Msa0481030:CDS
ACAGCAAAAGAAAATCCTTT+TGG 0.310436 3_3:+86782720 Msa0481030:CDS
CCAATCCATCATTCTCAATA+TGG 0.315483 3_3:-86786037 None:intergenic
CCGATCCTCCTCAATCAAAA+TGG 0.317683 3_3:-86781582 None:intergenic
GACTTGTCAGGAACTTCTTT+CGG 0.323775 3_3:-86782756 None:intergenic
TTTGGAATCTTCTGAGGAAT+TGG 0.324635 3_3:-86781303 None:intergenic
TGCTCGCAGTCAAGCCAATA+AGG 0.325903 3_3:+86782993 Msa0481030:CDS
CTGCAAACATCATGCAAAAC+TGG 0.335266 3_3:+86782696 Msa0481030:CDS
CCCAAGTAGTGGTAGGTTCC+TGG 0.337637 3_3:+86786630 Msa0481030:exon
TTACTTCAATACGGCTTTCC+TGG 0.337870 3_3:+86786891 Msa0481030:three_prime_UTR
AATTTATTCCCCAATGATAC+AGG 0.341767 3_3:+86784560 Msa0481030:CDS
AGTAAATTTCGTGTCTTTCC+AGG 0.345778 3_3:-86786598 None:intergenic
TCAGGCACAAGTTCAATATC+AGG 0.346755 3_3:-86781734 None:intergenic
TGTGATTTACTCACAGCTAT+TGG 0.352560 3_3:+86782900 Msa0481030:CDS
GGGTGATTCTTCATCCGATT+TGG 0.352781 3_3:-86781321 None:intergenic
CCTGTTAGTGGTGGGTTCTT+GGG 0.353815 3_3:+86786537 Msa0481030:CDS
AGCTCGAGCCCTGTATCATT+GGG 0.354935 3_3:-86784569 None:intergenic
TGTCATGGATAGCTCCAAAT+TGG 0.361242 3_3:+86784274 Msa0481030:CDS
TGATAGTTCTGATTTCTTGC+TGG 0.365281 3_3:+86785681 Msa0481030:CDS
GGCACAGGTAGGGCTCTTAT+AGG 0.366498 3_3:-86785412 None:intergenic
CCCAAGAACCCACCACTAAC+AGG 0.369943 3_3:-86786537 None:intergenic
GAACTTCACGTCCTTTCAAA+TGG 0.381979 3_3:+86784760 Msa0481030:CDS
AAGGGGAAGAAGAAAGAAAA+GGG 0.385837 3_3:+86781181 Msa0481030:five_prime_UTR
CCTACAATCTCCAGATCAAT+AGG 0.388992 3_3:-86782946 None:intergenic
TTCCTTCACTTAATAAAGTT+AGG 0.391363 3_3:+86785635 Msa0481030:CDS
TGAAATTAAGCTAGCTTGCT+TGG 0.391939 3_3:-86785602 None:intergenic
TTGACAGATCAAGATCAGTA+TGG 0.393928 3_3:+86785953 Msa0481030:intron
TTGGAATCTTCTGAGGAATT+GGG 0.394799 3_3:-86781302 None:intergenic
AGATCGCGAAGGAGTTGTTT+AGG 0.399266 3_3:-86781422 None:intergenic
GCTCAATTTCGAGCTATATC+AGG 0.400382 3_3:+86781841 Msa0481030:CDS
ACGTAATTATGTTCAGTAAC+AGG 0.402014 3_3:-86786402 None:intergenic
AGATAAAGAGGAGCATGTTC+AGG 0.402679 3_3:+86785462 Msa0481030:CDS
GCTGCAGCGACCCTAGTAAT+AGG 0.410657 3_3:+86786848 Msa0481030:three_prime_UTR
AAGAGTGAAGATGTTGTATC+TGG 0.414049 3_3:+86784858 Msa0481030:CDS
TGTCCTGCAAAAGTGTTCCA+TGG 0.414215 3_3:+86785350 Msa0481030:CDS
TACTGAACATAATTACGTAT+TGG 0.421369 3_3:+86786407 Msa0481030:CDS
TCCTTGACTTCTACCCTCCT+TGG 0.421741 3_3:-86784347 None:intergenic
GTCCTCTTTGGAAGTAAAGT+TGG 0.423484 3_3:-86785565 None:intergenic
AAGCTCGAGCCCTGTATCAT+TGG 0.424127 3_3:-86784570 None:intergenic
CACATTTCTTTCATCTGCGT+TGG 0.425225 3_3:-86785842 None:intergenic
GGCTTATGCAAGCCTGTTAG+TGG 0.427169 3_3:+86786525 Msa0481030:CDS
GCCAGGAACCTACCACTACT+TGG 0.432085 3_3:-86786631 None:intergenic
ATTGTATGTGTTGGAGTAGA+AGG 0.432464 3_3:+86784503 Msa0481030:CDS
GGATGCTCCAAAGGATATAA+AGG 0.433541 3_3:+86781772 Msa0481030:CDS
ATAAGAATGAACCTATTACT+AGG 0.433616 3_3:-86786859 None:intergenic
TCCAAAGGATATAAAGGATT+CGG 0.434186 3_3:+86781778 Msa0481030:CDS
TCAGTATGGAATATCCTCTA+AGG 0.435454 3_3:+86785967 Msa0481030:CDS
CGGTGTCACAAAAGGAGAAC+TGG 0.442782 3_3:+86785516 Msa0481030:CDS
GTTGATGTAATTGAAAATTC+CGG 0.444747 3_3:+86785496 Msa0481030:CDS
ATCGGAGATGATTGATTCAA+TGG 0.448522 3_3:-86781372 None:intergenic
TTTCAAATGGGCTCAGCACC+TGG 0.449308 3_3:+86784773 Msa0481030:CDS
CCTATTGATCTGGAGATTGT+AGG 0.450944 3_3:+86782946 Msa0481030:CDS
TCAATGTCCTCACAGAATAT+CGG 0.451544 3_3:-86786683 None:intergenic
GAAAATTCCGGTGTCACAAA+AGG 0.454854 3_3:+86785508 Msa0481030:CDS
CTTTCCAGGAGATCGTCTTC+CGG 0.455333 3_3:-86786584 None:intergenic
CACAAAAGATTCCATGATTG+TGG 0.455385 3_3:+86786930 Msa0481030:three_prime_UTR
AGTAAAATCCACCGGCGCCT+TGG 0.456353 3_3:-86781627 None:intergenic
AAAGGGGAAGAAGAAAGAAA+AGG 0.457798 3_3:+86781180 Msa0481030:five_prime_UTR
TTGTATGCGTAATTCCTAGC+TGG 0.459235 3_3:-86782828 None:intergenic
GACGGAACGCGCCAAGGCGC+CGG 0.461594 3_3:+86781616 Msa0481030:CDS
ACACGAAATTTACTTCCAAC+TGG 0.462020 3_3:+86786607 Msa0481030:CDS
ATGGTCAGAGACGTAGAAAA+AGG 0.466929 3_3:+86784324 Msa0481030:CDS
AACTTCACGTCCTTTCAAAT+GGG 0.468507 3_3:+86784761 Msa0481030:CDS
CTTTGCAGAACCTATTGATC+TGG 0.474661 3_3:+86782936 Msa0481030:CDS
TAAGAATGAACCTATTACTA+GGG 0.474795 3_3:-86786858 None:intergenic
GTCCTGCAAAAGTGTTCCAT+GGG 0.475044 3_3:+86785351 Msa0481030:CDS
TCACTTCATCACTCTTCGTC+AGG 0.476768 3_3:+86781463 Msa0481030:CDS
TTCCTCTGAAAGATCTAGCC+AGG 0.481627 3_3:-86786648 None:intergenic
GTAATGAGTTTCGCAGGCTT+AGG 0.488419 3_3:-86784449 None:intergenic
GCCTAGTGAAGTTTCGTCTC+CGG 0.488424 3_3:+86785432 Msa0481030:CDS
CCTTGTGCAAATTGGATGGC+TGG 0.488621 3_3:+86785386 Msa0481030:CDS
TCGACTATTATTTAGATGAC+GGG 0.492059 3_3:+86786460 Msa0481030:CDS
GCTACATCATTGAATTTAGT+CGG 0.496566 3_3:+86786974 Msa0481030:three_prime_UTR
CTCAAGGAGAAAAGCTCAGT+TGG 0.496776 3_3:+86784935 Msa0481030:CDS
CTGGATAGTATGACGGAAGA+TGG 0.496785 3_3:+86785535 Msa0481030:CDS
CCATATTGAGAATGATGGAT+TGG 0.500477 3_3:+86786037 Msa0481030:CDS
CACAAAGTCTCTTTCGTGGA+TGG 0.500633 3_3:+86785777 Msa0481030:CDS
TGTGTTATAAACCACAATCA+TGG 0.501166 3_3:-86786941 None:intergenic
CATCCACGAAAGAGACTTTG+TGG 0.504004 3_3:-86785776 None:intergenic
TTGCATAAGATGTCATTGTC+AGG 0.506215 3_3:-86784539 None:intergenic
ACTCTTTGTTCAAGATGCTA+TGG 0.511192 3_3:+86784722 Msa0481030:CDS
GATGTGAAGGGAGACTTGTC+AGG 0.511452 3_3:-86782768 None:intergenic
GTGCCACAAAGTCTCTTTCG+TGG 0.511476 3_3:+86785773 Msa0481030:CDS
TTAAGAGACTTAAGATGTGA+AGG 0.514586 3_3:-86782781 None:intergenic
TTCCTCAGAAGATTCCAAAT+CGG 0.514850 3_3:+86781307 Msa0481030:CDS
GGAGCATGTTCAGGAATCAA+TGG 0.514864 3_3:+86785471 Msa0481030:CDS
TTCGACTATTATTTAGATGA+CGG 0.514880 3_3:+86786459 Msa0481030:CDS
TGCACTACCTTGGTTGATGT+TGG 0.517644 3_3:+86786504 Msa0481030:CDS
CTCATAATTTGATGCTCAAG+AGG 0.519703 3_3:+86781819 Msa0481030:CDS
GGAAGCAGTGGAGACACCTC+AGG 0.528192 3_3:-86784813 None:intergenic
ATCCGATTTGGAATCTTCTG+AGG 0.529566 3_3:-86781309 None:intergenic
AAATGGGCTCAGCACCTGGC+AGG 0.529594 3_3:+86784777 Msa0481030:CDS
AGATACAACATCTTCACTCT+TGG 0.532554 3_3:-86784856 None:intergenic
GACCTAACTTTATTAAGTGA+AGG 0.533202 3_3:-86785637 None:intergenic
ATCTTCTGAGGAATTGGGAA+AGG 0.534448 3_3:-86781297 None:intergenic
ATCACCGGAAGACGATCTCC+TGG 0.534779 3_3:+86786580 Msa0481030:CDS
GGAACGCGCCAAGGCGCCGG+TGG 0.534919 3_3:+86781619 Msa0481030:CDS
CTACCACTACTTGGGCCAGT+TGG 0.535290 3_3:-86786622 None:intergenic
TTCCAACTTTACTTCCAAAG+AGG 0.536943 3_3:+86785563 Msa0481030:CDS
ACAGCTATTGGCTCAGAAAG+AGG 0.537328 3_3:+86782912 Msa0481030:CDS
TGAATTTAGTCGGACAGCTA+TGG 0.539456 3_3:+86786984 Msa0481030:three_prime_UTR
GGTTTGCAATAGTCTCCAAA+AGG 0.539923 3_3:-86782735 None:intergenic
GCTGCTTCACTGTTATCAGC+GGG 0.541519 3_3:-86784834 None:intergenic
GCCAAGGAGGGTAGAAGTCA+AGG 0.542038 3_3:+86784346 Msa0481030:CDS
TCCTCTTTATCTATGATAGC+CGG 0.543176 3_3:-86785451 None:intergenic
CTGTTATCAGCGGGAAGCAG+TGG 0.544666 3_3:-86784825 None:intergenic
AATGCAGACGGAACGCGCCA+AGG 0.546272 3_3:+86781610 Msa0481030:CDS
TATGCAAGCCTGTTAGTGGT+GGG 0.547975 3_3:+86786529 Msa0481030:CDS
TCCGGCTATCATAGATAAAG+AGG 0.548495 3_3:+86785450 Msa0481030:CDS
AGGGCTCGAGCTTCCACACC+AGG 0.548560 3_3:+86784580 Msa0481030:CDS
CTCAGGCATTTCCACTGTCA+TGG 0.550033 3_3:+86784259 Msa0481030:intron
CTTAGCGTAATGAGTTTCGC+AGG 0.550291 3_3:-86784455 None:intergenic
TTATATCCTTTGGAGCATCC+CGG 0.550527 3_3:-86781769 None:intergenic
TTATGCAAGCCTGTTAGTGG+TGG 0.554168 3_3:+86786528 Msa0481030:CDS
GAGTACCATATTGAGAATGA+TGG 0.556346 3_3:+86786032 Msa0481030:CDS
CTTCCAACTGGCCCAAGTAG+TGG 0.557816 3_3:+86786619 Msa0481030:CDS
TACGCTAAGGTTTGAGTACG+TGG 0.557983 3_3:+86784469 Msa0481030:CDS
CTCACAGAATATCGGTATTG+TGG 0.558742 3_3:-86786675 None:intergenic
AAGGACAAATTGCACTACCT+TGG 0.559183 3_3:+86786494 Msa0481030:CDS
GGCTGCTTCACTGTTATCAG+CGG 0.559248 3_3:-86784835 None:intergenic
GTCAAGGAGAGCCCTGACCA+AGG 0.564171 3_3:+86784362 Msa0481030:CDS
AAATGTGAATCTAGAAGCCA+AGG 0.564314 3_3:+86785858 Msa0481030:CDS
CTGCGAAACTCATTACGCTA+AGG 0.568154 3_3:+86784456 Msa0481030:CDS
AGGTGCTGAGCCCATTTGAA+AGG 0.573624 3_3:-86784771 None:intergenic
TAAATCACATAAAGAGCTGG+TGG 0.575843 3_3:-86782886 None:intergenic
GCAAGAAATCAATTCCTGCC+AGG 0.576163 3_3:-86784791 None:intergenic
AAGTTGAATATTGTATGTGT+TGG 0.576638 3_3:+86784494 Msa0481030:CDS
GAAGACGGTGAGATAGAAGA+AGG 0.577436 3_3:+86781242 Msa0481030:CDS
TGCACGGATTTAAGTATGCT+AGG 0.577573 3_3:+86786772 Msa0481030:three_prime_UTR
AGGAATTGATTTCTTGCCTG+AGG 0.580835 3_3:+86784797 Msa0481030:CDS
GAGTAAATCACATAAAGAGC+TGG 0.582503 3_3:-86782889 None:intergenic
TGAAGTCAAGGAATGATGAC+GGG 0.582715 3_3:-86786718 None:intergenic
AAGGGAGTGTGCAAAGCCCA+TGG 0.583753 3_3:-86785367 None:intergenic
TAAGAGACTTAAGATGTGAA+GGG 0.584117 3_3:-86782780 None:intergenic
TCAAGGAGAGCCCTGACCAA+GGG 0.584919 3_3:+86784363 Msa0481030:CDS
GGAGTAGAAGGATCTAATGA+TGG 0.587145 3_3:+86784515 Msa0481030:CDS
TCTGAGAAATTGCAGTTGCA+CGG 0.590669 3_3:+86786756 Msa0481030:three_prime_UTR
ACTCCCTTGTGCAAATTGGA+TGG 0.592687 3_3:+86785382 Msa0481030:CDS
AGAAGAAGGTTCAATCGCCA+TGG 0.593173 3_3:+86781256 Msa0481030:CDS
GTGAAGTCAAGGAATGATGA+CGG 0.594695 3_3:-86786719 None:intergenic
GAAAGCACTCAAACCTGGTG+TGG 0.596775 3_3:-86784593 None:intergenic
GACGAAACTTCACTAGGCAC+AGG 0.597712 3_3:-86785427 None:intergenic
GACGAAGAGTGATGAAGTGA+AGG 0.597855 3_3:-86781460 None:intergenic
AAACTTCACTAGGCACAGGT+AGG 0.600562 3_3:-86785423 None:intergenic
CAACTGGCCCAAGTAGTGGT+AGG 0.604658 3_3:+86786623 Msa0481030:exon
CCAGCCATCCAATTTGCACA+AGG 0.607211 3_3:-86785386 None:intergenic
TCAATATGGTACTCCCCAGA+AGG 0.607678 3_3:-86786023 None:intergenic
AACTTCACTAGGCACAGGTA+GGG 0.609874 3_3:-86785422 None:intergenic
AATCTCTTACAAAACTTGAG+TGG 0.610169 3_3:+86785320 Msa0481030:CDS
ATGACGGGTTATCATCTGAA+AGG 0.619159 3_3:+86786475 Msa0481030:CDS
TTCTGCAGAGAATTCGCTCA+AGG 0.620044 3_3:+86784919 Msa0481030:CDS
ATTTATTCCCCAATGATACA+GGG 0.620305 3_3:+86784561 Msa0481030:CDS
GTGGATGGATTCTGGTGTGA+AGG 0.621402 3_3:+86785792 Msa0481030:CDS
AGGAGAACTGGATAGTATGA+CGG 0.623615 3_3:+86785528 Msa0481030:CDS
TTGCCTGTACAAAACCAGCT+AGG 0.626584 3_3:+86782814 Msa0481030:CDS
CCAGGAACCTACCACTACTT+GGG 0.627888 3_3:-86786630 None:intergenic
AGCTATGGTAGGATGTAATG+TGG 0.629385 3_3:+86786999 Msa0481030:three_prime_UTR
TTCCTGGCTAGATCTTTCAG+AGG 0.630405 3_3:+86786646 Msa0481030:three_prime_UTR
TTTAGTCGGACAGCTATGGT+AGG 0.634955 3_3:+86786988 Msa0481030:three_prime_UTR
AGTCAAGCCAATAAGGACAC+TGG 0.636523 3_3:+86783000 Msa0481030:CDS
GGATCGGGTTAAAATGCAGA+CGG 0.649067 3_3:+86781598 Msa0481030:CDS
GTTCACGATGATGAAGAAGA+TGG 0.649163 3_3:+86784305 Msa0481030:CDS
CTGTCTGTACTCGATTCTGT+TGG 0.651052 3_3:-86784896 None:intergenic
TGCAACGTAGTAAAATCCAC+CGG 0.652794 3_3:-86781635 None:intergenic
TGAACTTCGTGCAATAGAAG+CGG 0.654739 3_3:+86786070 Msa0481030:CDS
CAAGGAGAGCCCTGACCAAG+GGG 0.657687 3_3:+86784364 Msa0481030:CDS
CAGATCAATAGGTTCTGCAA+AGG 0.660500 3_3:-86782935 None:intergenic
ACTTCGTGCAATAGAAGCGG+AGG 0.668958 3_3:+86786073 Msa0481030:CDS
TTTGAGTAACGAGATCGCGA+AGG 0.671039 3_3:-86781433 None:intergenic
ACAACAGCGAAAATGGAAGA+CGG 0.671179 3_3:+86781227 Msa0481030:exon
CAGCCATCCAATTTGCACAA+GGG 0.676174 3_3:-86785385 None:intergenic
TTTGGAGCTATCCATGACAG+TGG 0.677285 3_3:-86784270 None:intergenic
TTGAGAATGATGGATTGGAA+TGG 0.679880 3_3:+86786042 Msa0481030:CDS
TAAATAATAGTCGAACAACA+TGG 0.681981 3_3:-86786451 None:intergenic
GCCGGAGACGAAACTTCACT+AGG 0.682325 3_3:-86785433 None:intergenic
GCATAAGCCAACATCAACCA+AGG 0.685956 3_3:-86786511 None:intergenic
GCTCGAGCCCTGTATCATTG+GGG 0.698274 3_3:-86784568 None:intergenic
ACGGATTTAAGTATGCTAGG+AGG 0.706111 3_3:+86786775 Msa0481030:three_prime_UTR
CACAATACCGATATTCTGTG+AGG 0.731721 3_3:+86786676 Msa0481030:three_prime_UTR
AAGGAGAGCCCTGACCAAGG+GGG 0.746053 3_3:+86784365 Msa0481030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAAAAATTATGTTTATAT+AGG - chr3_3:86783950-86783969 None:intergenic 10.0%
!!! ATAAATTTTGTAGATAAAAA+GGG - chr3_3:86785895-86785914 None:intergenic 10.0%
!!! AATAAATTTTGTAGATAAAA+AGG - chr3_3:86785896-86785915 None:intergenic 10.0%
!!! TATTTAACTTTTTTTATCTT+TGG - chr3_3:86786249-86786268 None:intergenic 10.0%
!!! TTATTAATTTTACTTCAATA+CGG + chr3_3:86786882-86786901 Msa0481030:three_prime_UTR 10.0%
!! AAAATATTACCTTGAATATT+TGG + chr3_3:86781886-86781905 Msa0481030:intron 15.0%
!!! CTTTGAAATTTAAATACTAT+GGG - chr3_3:86782233-86782252 None:intergenic 15.0%
!!! TCTTTGAAATTTAAATACTA+TGG - chr3_3:86782234-86782253 None:intergenic 15.0%
!! CCATTTATATAAATATAATC+CGG - chr3_3:86783115-86783134 None:intergenic 15.0%
!! GATTATATTTATATAAATGG+TGG + chr3_3:86783115-86783134 Msa0481030:intron 15.0%
!!! ATCTAATTGTATTTTTTAAC+TGG - chr3_3:86783181-86783200 None:intergenic 15.0%
!!! GTTTTAATTTGTAACATATA+TGG - chr3_3:86783216-86783235 None:intergenic 15.0%
!! TGAATCTATTTAAATTTCAA+GGG - chr3_3:86783429-86783448 None:intergenic 15.0%
!! TTGAAATTTAAATAGATTCA+CGG + chr3_3:86783429-86783448 Msa0481030:intron 15.0%
!! AAAAATCAATTAATGTTTGA+AGG + chr3_3:86783660-86783679 Msa0481030:intron 15.0%
!!! TTTTAAGAAAGAAAACAAAA+AGG + chr3_3:86783686-86783705 Msa0481030:intron 15.0%
!!! TTTTAATAAATATAGACCAT+TGG + chr3_3:86783854-86783873 Msa0481030:intron 15.0%
!! AAAAATTATGTTTATATAGG+TGG - chr3_3:86783947-86783966 None:intergenic 15.0%
!! TTATCTACAAAATTTATTCA+AGG + chr3_3:86785898-86785917 Msa0481030:intron 15.0%
!! TTAGAAATGAAAACATTAAT+AGG - chr3_3:86786348-86786367 None:intergenic 15.0%
!!! TTTTAGTTGAATTGTGAAAT+TGG - chr3_3:86781503-86781522 None:intergenic 20.0%
!! TCAACTAAAAAATTACAGTT+TGG + chr3_3:86781513-86781532 Msa0481030:intron 20.0%
!!! TGTTTTCTTCTCAATTTTAT+AGG + chr3_3:86781550-86781569 Msa0481030:intron 20.0%
!! TCATTATCTTAAAGCTATTA+AGG + chr3_3:86781685-86781704 Msa0481030:CDS 20.0%
!!! AAGAAATGTGCATTTTATAT+AGG + chr3_3:86781928-86781947 Msa0481030:intron 20.0%
!!! TTTCATAAGTTTTCTAAGAT+AGG - chr3_3:86782097-86782116 None:intergenic 20.0%
!! CCGGATTATATTTATATAAA+TGG + chr3_3:86783112-86783131 Msa0481030:intron 20.0%
!! AAAATAGGTTTAGAGATTTA+AGG - chr3_3:86783318-86783337 None:intergenic 20.0%
!! GTGAATCTATTTAAATTTCA+AGG - chr3_3:86783430-86783449 None:intergenic 20.0%
!!! GTTTTTTTTATCAATGTTGA+TGG + chr3_3:86783721-86783740 Msa0481030:intron 20.0%
!! TCAGTATTAAGATATTCAAA+TGG - chr3_3:86784159-86784178 None:intergenic 20.0%
!!! TGATTTTATTTTTACTACTC+AGG + chr3_3:86784242-86784261 Msa0481030:intron 20.0%
!!! CATTGATAATGATTTTAAGT+GGG - chr3_3:86784406-86784425 None:intergenic 20.0%
!!! ACATTGATAATGATTTTAAG+TGG - chr3_3:86784407-86784426 None:intergenic 20.0%
!! TTAAAATTTGTGGAATTCTT+TGG + chr3_3:86785275-86785294 Msa0481030:intron 20.0%
!! AAATTTATTCAAGGATCTAT+TGG + chr3_3:86785907-86785926 Msa0481030:intron 20.0%
!! TCTGTCAAAAAATAAAATCT+AGG - chr3_3:86785941-86785960 None:intergenic 20.0%
!!! TGTTTTCATTTCTAAATTGT+AGG + chr3_3:86786353-86786372 Msa0481030:intron 20.0%
! TACAAAATGCCAAATATTCA+AGG - chr3_3:86781898-86781917 None:intergenic 25.0%
! AATAAGTTGTTTATCCAAAC+AGG - chr3_3:86781955-86781974 None:intergenic 25.0%
!!! TAAATTTTGAGAGACTGTTT+GGG - chr3_3:86782172-86782191 None:intergenic 25.0%
!!! ATAAATTTTGAGAGACTGTT+TGG - chr3_3:86782173-86782192 None:intergenic 25.0%
! TTTCAAAGAGAATGTGATAT+TGG + chr3_3:86782245-86782264 Msa0481030:intron 25.0%
! ATCAACATATCAAGTAACTT+TGG - chr3_3:86782426-86782445 None:intergenic 25.0%
! TCTAAAAGATGAATGAATGA+AGG - chr3_3:86782577-86782596 None:intergenic 25.0%
! TGCATATAAGAAGAATTGTA+AGG - chr3_3:86782653-86782672 None:intergenic 25.0%
! ATACAATTAGATCAAATCTC+TGG + chr3_3:86783189-86783208 Msa0481030:intron 25.0%
!!! AGATTATGTGTGGAATTTTT+TGG - chr3_3:86783247-86783266 None:intergenic 25.0%
!! TAAACCTATTTTCCATATGT+GGG + chr3_3:86783326-86783345 Msa0481030:intron 25.0%
! TAAGAAAGAAAACAAAAAGG+AGG + chr3_3:86783689-86783708 Msa0481030:intron 25.0%
! AAGTTGAATATTGTATGTGT+TGG + chr3_3:86784494-86784513 Msa0481030:CDS 25.0%
! ATGGAAGATAAATATTGAGT+TGG - chr3_3:86784669-86784688 None:intergenic 25.0%
! TTCCATTTCTTTCATTTGAA+TGG + chr3_3:86784683-86784702 Msa0481030:intron 25.0%
! TTATGTTGAACATCATGAAA+AGG - chr3_3:86785021-86785040 None:intergenic 25.0%
! TGAAAACATAACCAAAACAA+AGG - chr3_3:86785082-86785101 None:intergenic 25.0%
! CATGCTTAAGTTAAAATTTG+TGG + chr3_3:86785265-86785284 Msa0481030:intron 25.0%
! GTTGATGTAATTGAAAATTC+CGG + chr3_3:86785496-86785515 Msa0481030:CDS 25.0%
! TTCCTTCACTTAATAAAGTT+AGG + chr3_3:86785635-86785654 Msa0481030:CDS 25.0%
! GTCAAAAAATAAAATCTAGG+TGG - chr3_3:86785938-86785957 None:intergenic 25.0%
! ATATGATTTCTTCAAGGAAT+GGG + chr3_3:86786153-86786172 Msa0481030:intron 25.0%
!!! ACATGTTTTTTTGTTCTTGA+TGG + chr3_3:86786188-86786207 Msa0481030:intron 25.0%
!!! CATGTTTTTTTGTTCTTGAT+GGG + chr3_3:86786189-86786208 Msa0481030:intron 25.0%
! TCTTTGGACATTATAGTAAA+GGG - chr3_3:86786233-86786252 None:intergenic 25.0%
! ATCTTTGGACATTATAGTAA+AGG - chr3_3:86786234-86786253 None:intergenic 25.0%
! TACTGAACATAATTACGTAT+TGG + chr3_3:86786407-86786426 Msa0481030:CDS 25.0%
! TAAATAATAGTCGAACAACA+TGG - chr3_3:86786454-86786473 None:intergenic 25.0%
! TTCGACTATTATTTAGATGA+CGG + chr3_3:86786459-86786478 Msa0481030:CDS 25.0%
!!! GTTTTTAAAATGTGAAGTCA+AGG - chr3_3:86786733-86786752 None:intergenic 25.0%
!!! TGACTTCACATTTTAAAAAC+TGG + chr3_3:86786733-86786752 Msa0481030:three_prime_UTR 25.0%
! TAAGAATGAACCTATTACTA+GGG - chr3_3:86786861-86786880 None:intergenic 25.0%
! ATAAGAATGAACCTATTACT+AGG - chr3_3:86786862-86786881 None:intergenic 25.0%
!! TAAGCTGATTTTTGCTTCAA+AGG + chr3_3:86781162-86781181 Msa0481030:five_prime_UTR 30.0%
!! AAGCTGATTTTTGCTTCAAA+GGG + chr3_3:86781163-86781182 Msa0481030:five_prime_UTR 30.0%
! AGAAGAAAGAAAAGGGTTTT+AGG + chr3_3:86781188-86781207 Msa0481030:five_prime_UTR 30.0%
!!! TTTTTTGATGGAGAGGATAT+CGG - chr3_3:86781393-86781412 None:intergenic 30.0%
!!! AGGTTTAGCTTCTTTTTTGA+TGG - chr3_3:86781405-86781424 None:intergenic 30.0%
!!! AAATCGTTCCATTTTGATTG+AGG + chr3_3:86781574-86781593 Msa0481030:CDS 30.0%
TCCAAAGGATATAAAGGATT+CGG + chr3_3:86781778-86781797 Msa0481030:CDS 30.0%
! CATTTTATATAGGTCCTGTT+TGG + chr3_3:86781938-86781957 Msa0481030:intron 30.0%
! GCTTATCAACACAAATCTTT+TGG - chr3_3:86782310-86782329 None:intergenic 30.0%
AAGGATTGTAGGATAAATAC+AGG + chr3_3:86782347-86782366 Msa0481030:intron 30.0%
AGGATTGTAGGATAAATACA+GGG + chr3_3:86782348-86782367 Msa0481030:intron 30.0%
CATATCAAGTAACTTTGGAT+TGG - chr3_3:86782421-86782440 None:intergenic 30.0%
! ACAGCAAAAGAAAATCCTTT+TGG + chr3_3:86782720-86782739 Msa0481030:CDS 30.0%
TAAGAGACTTAAGATGTGAA+GGG - chr3_3:86782783-86782802 None:intergenic 30.0%
TTAAGAGACTTAAGATGTGA+AGG - chr3_3:86782784-86782803 None:intergenic 30.0%
!! ACGTGAATTTTAACATTCTC+TGG + chr3_3:86783038-86783057 Msa0481030:intron 30.0%
!!! GTATTTTTTAACTGGTTCAC+CGG - chr3_3:86783173-86783192 None:intergenic 30.0%
! CTAAACCTATTTTCCATATG+TGG + chr3_3:86783325-86783344 Msa0481030:intron 30.0%
ACGATGAAGTAATTTGACAA+GGG - chr3_3:86783377-86783396 None:intergenic 30.0%
TAGTGTGACATCAAACATTT+GGG + chr3_3:86783481-86783500 Msa0481030:intron 30.0%
AACAAAAAGGAGGAATGAAA+AGG + chr3_3:86783699-86783718 Msa0481030:intron 30.0%
AGAAAGAAAGTGATGAAGAA+AGG + chr3_3:86783784-86783803 Msa0481030:intron 30.0%
AAACAAATGTATCACTCCAA+AGG + chr3_3:86783981-86784000 Msa0481030:intron 30.0%
! CAAAACAACAAGTTGAAGAA+AGG + chr3_3:86784064-86784083 Msa0481030:intron 30.0%
TTCTATGCAAGTACATTATG+TGG + chr3_3:86784117-86784136 Msa0481030:intron 30.0%
AATTTATTCCCCAATGATAC+AGG + chr3_3:86784560-86784579 Msa0481030:CDS 30.0%
ATTTATTCCCCAATGATACA+GGG + chr3_3:86784561-86784580 Msa0481030:CDS 30.0%
CACCATTCAAATGAAAGAAA+TGG - chr3_3:86784688-86784707 None:intergenic 30.0%
! GATCAACCTAAGATTTTCTA+TGG + chr3_3:86785056-86785075 Msa0481030:intron 30.0%
!! ATTTTCTATGGCCTTTGTTT+TGG + chr3_3:86785068-86785087 Msa0481030:intron 30.0%
CACTAAAATGATTCAGAACA+GGG - chr3_3:86785140-86785159 None:intergenic 30.0%
ACACTAAAATGATTCAGAAC+AGG - chr3_3:86785141-86785160 None:intergenic 30.0%
TGGATTTATTGCAAATGAAC+TGG - chr3_3:86785196-86785215 None:intergenic 30.0%
ACGATAAGCAAGATAAACTA+GGG - chr3_3:86785235-86785254 None:intergenic 30.0%
AACGATAAGCAAGATAAACT+AGG - chr3_3:86785236-86785255 None:intergenic 30.0%
AATCTCTTACAAAACTTGAG+TGG + chr3_3:86785320-86785339 Msa0481030:CDS 30.0%
GACCTAACTTTATTAAGTGA+AGG - chr3_3:86785640-86785659 None:intergenic 30.0%
CAAAAACTCAATGCAAAAAG+AGG - chr3_3:86785996-86786015 None:intergenic 30.0%
! CTTTTTGCATTGAGTTTTTG+TGG + chr3_3:86785996-86786015 Msa0481030:CDS 30.0%
TGTTACTCTGGTAAAATCAT+TGG + chr3_3:86786117-86786136 Msa0481030:intron 30.0%
CTTGTGATATGATTTCTTCA+AGG + chr3_3:86786147-86786166 Msa0481030:intron 30.0%
GATATGATTTCTTCAAGGAA+TGG + chr3_3:86786152-86786171 Msa0481030:intron 30.0%
CATTATAGTAAAGGGGAAAA+TGG - chr3_3:86786225-86786244 None:intergenic 30.0%
CTTTGGACATTATAGTAAAG+GGG - chr3_3:86786232-86786251 None:intergenic 30.0%
ACGTAATTATGTTCAGTAAC+AGG - chr3_3:86786405-86786424 None:intergenic 30.0%
TCGACTATTATTTAGATGAC+GGG + chr3_3:86786460-86786479 Msa0481030:CDS 30.0%
TGAAAAACAATACTAGTACC+AGG - chr3_3:86786912-86786931 None:intergenic 30.0%
TGTGTTATAAACCACAATCA+TGG - chr3_3:86786944-86786963 None:intergenic 30.0%
GCTACATCATTGAATTTAGT+CGG + chr3_3:86786974-86786993 Msa0481030:three_prime_UTR 30.0%
!! AGCTGATTTTTGCTTCAAAG+GGG + chr3_3:86781164-86781183 Msa0481030:five_prime_UTR 35.0%
AAAGGGGAAGAAGAAAGAAA+AGG + chr3_3:86781180-86781199 Msa0481030:five_prime_UTR 35.0%
AAGGGGAAGAAGAAAGAAAA+GGG + chr3_3:86781181-86781200 Msa0481030:five_prime_UTR 35.0%
GAACAAAACAACAGCGAAAA+TGG + chr3_3:86781220-86781239 Msa0481030:exon 35.0%
!! TTGTTCGTTTTGTTCTTCCA+TGG - chr3_3:86781276-86781295 None:intergenic 35.0%
! TTGGAATCTTCTGAGGAATT+GGG - chr3_3:86781305-86781324 None:intergenic 35.0%
! TTTGGAATCTTCTGAGGAAT+TGG - chr3_3:86781306-86781325 None:intergenic 35.0%
TTCCTCAGAAGATTCCAAAT+CGG + chr3_3:86781307-86781326 Msa0481030:CDS 35.0%
!!! CTGTTTTGAAGCAATTCGTA+GGG - chr3_3:86781344-86781363 None:intergenic 35.0%
!!! ACTGTTTTGAAGCAATTCGT+AGG - chr3_3:86781345-86781364 None:intergenic 35.0%
! ATCGGAGATGATTGATTCAA+TGG - chr3_3:86781375-86781394 None:intergenic 35.0%
!!! TAGCTTCTTTTTTGATGGAG+AGG - chr3_3:86781400-86781419 None:intergenic 35.0%
TGTGAAATTGGATAAACCCT+AGG - chr3_3:86781491-86781510 None:intergenic 35.0%
TACGTTGCAGCTTCATAATT+TGG + chr3_3:86781649-86781668 Msa0481030:CDS 35.0%
ACCGAATCCTTTATATCCTT+TGG - chr3_3:86781782-86781801 None:intergenic 35.0%
CTCATAATTTGATGCTCAAG+AGG + chr3_3:86781819-86781838 Msa0481030:CDS 35.0%
! TCAACACAAATCTTTTGGTG+AGG - chr3_3:86782305-86782324 None:intergenic 35.0%
TTGTGTTAGGAAAGGATTGT+AGG + chr3_3:86782336-86782355 Msa0481030:intron 35.0%
TTGTAGGATAAATACAGGGT+TGG + chr3_3:86782352-86782371 Msa0481030:intron 35.0%
!! ACTGAATGTGGTGTTATATC+AGG + chr3_3:86782493-86782512 Msa0481030:intron 35.0%
!! AATGTGGTGTTATATCAGGT+TGG + chr3_3:86782497-86782516 Msa0481030:intron 35.0%
TAAATCACATAAAGAGCTGG+TGG - chr3_3:86782889-86782908 None:intergenic 35.0%
GAGTAAATCACATAAAGAGC+TGG - chr3_3:86782892-86782911 None:intergenic 35.0%
TGTGATTTACTCACAGCTAT+TGG + chr3_3:86782900-86782919 Msa0481030:CDS 35.0%
TAACTTACCAGTGTCCTTAT+TGG - chr3_3:86783010-86783029 None:intergenic 35.0%
! AGGTTTAGAGATTTAAGGTC+TGG - chr3_3:86783313-86783332 None:intergenic 35.0%
CTTTCCCACATATGGAAAAT+AGG - chr3_3:86783333-86783352 None:intergenic 35.0%
CGATGAAGTAATTTGACAAG+GGG - chr3_3:86783376-86783395 None:intergenic 35.0%
GACGATGAAGTAATTTGACA+AGG - chr3_3:86783378-86783397 None:intergenic 35.0%
CTAGTGTGACATCAAACATT+TGG + chr3_3:86783480-86783499 Msa0481030:intron 35.0%
AGTGTGACATCAAACATTTG+GGG + chr3_3:86783482-86783501 Msa0481030:intron 35.0%
AGAAATATGCTTGTCCATGA+TGG - chr3_3:86783579-86783598 None:intergenic 35.0%
AGCATGAATAGGAAACTTCT+TGG + chr3_3:86783614-86783633 Msa0481030:intron 35.0%
!! TGATGGATTCAATTGCCATT+TGG + chr3_3:86783738-86783757 Msa0481030:intron 35.0%
TTGCAATCTTGCTAACCAAA+TGG - chr3_3:86783756-86783775 None:intergenic 35.0%
ATTTGGTTAGCAAGATTGCA+AGG + chr3_3:86783755-86783774 Msa0481030:intron 35.0%
!!! GTGATTTTTTTCTGCTTCAC+CGG + chr3_3:86783889-86783908 Msa0481030:intron 35.0%
GTTTATATAGGTGGCTTCTA+GGG - chr3_3:86783938-86783957 None:intergenic 35.0%
TGTTTATATAGGTGGCTTCT+AGG - chr3_3:86783939-86783958 None:intergenic 35.0%
AAAGATTGCATACAGAGTGA+AGG - chr3_3:86784099-86784118 None:intergenic 35.0%
GTGAACATCATCTTCCAATT+TGG - chr3_3:86784291-86784310 None:intergenic 35.0%
ATTGTATGTGTTGGAGTAGA+AGG + chr3_3:86784503-86784522 Msa0481030:CDS 35.0%
TTGCATAAGATGTCATTGTC+AGG - chr3_3:86784542-86784561 None:intergenic 35.0%
TTTGAGTGCTTTCATGTCAT+GGG + chr3_3:86784603-86784622 Msa0481030:intron 35.0%
ACTCTTTGTTCAAGATGCTA+TGG + chr3_3:86784722-86784741 Msa0481030:CDS 35.0%
AACTTCACGTCCTTTCAAAT+GGG + chr3_3:86784761-86784780 Msa0481030:CDS 35.0%
AGATACAACATCTTCACTCT+TGG - chr3_3:86784859-86784878 None:intergenic 35.0%
AAGAGTGAAGATGTTGTATC+TGG + chr3_3:86784858-86784877 Msa0481030:CDS 35.0%
GAACATCATGAAAAGGTCAT+TGG - chr3_3:86785014-86785033 None:intergenic 35.0%
CAAAGGCCATAGAAAATCTT+AGG - chr3_3:86785065-86785084 None:intergenic 35.0%
TAAAATGATTCAGAACAGGG+AGG - chr3_3:86785137-86785156 None:intergenic 35.0%
ATCTTGCTTATCGTTGTAGT+TGG + chr3_3:86785241-86785260 Msa0481030:intron 35.0%
TCTTGCTTATCGTTGTAGTT+GGG + chr3_3:86785242-86785261 Msa0481030:intron 35.0%
AATTTGTGGAATTCTTTGGC+TGG + chr3_3:86785279-86785298 Msa0481030:intron 35.0%
TCCTCTTTATCTATGATAGC+CGG - chr3_3:86785454-86785473 None:intergenic 35.0%
TTCCAACTTTACTTCCAAAG+AGG + chr3_3:86785563-86785582 Msa0481030:CDS 35.0%
TGATCAAACTTAGTCCTCTT+TGG - chr3_3:86785580-86785599 None:intergenic 35.0%
!! TGAAATTAAGCTAGCTTGCT+TGG - chr3_3:86785605-86785624 None:intergenic 35.0%
!!! ATCGCCTTTTTTGAAACTCA+GGG - chr3_3:86785662-86785681 None:intergenic 35.0%
!! TGATAGTTCTGATTTCTTGC+TGG + chr3_3:86785681-86785700 Msa0481030:CDS 35.0%
! TGGTTTTTCTGCTAAGAACA+AGG - chr3_3:86785825-86785844 None:intergenic 35.0%
AAATGTGAATCTAGAAGCCA+AGG + chr3_3:86785858-86785877 Msa0481030:CDS 35.0%
AAAGGGATGATTCTTTACCT+TGG - chr3_3:86785878-86785897 None:intergenic 35.0%
TTGACAGATCAAGATCAGTA+TGG + chr3_3:86785953-86785972 Msa0481030:intron 35.0%
TCAGTATGGAATATCCTCTA+AGG + chr3_3:86785967-86785986 Msa0481030:CDS 35.0%
AAACTCAATGCAAAAAGAGG+AGG - chr3_3:86785993-86786012 None:intergenic 35.0%
GAGTACCATATTGAGAATGA+TGG + chr3_3:86786032-86786051 Msa0481030:CDS 35.0%
CCAATCCATCATTCTCAATA+TGG - chr3_3:86786040-86786059 None:intergenic 35.0%
!! CCATATTGAGAATGATGGAT+TGG + chr3_3:86786037-86786056 Msa0481030:CDS 35.0%
!! TTGAGAATGATGGATTGGAA+TGG + chr3_3:86786042-86786061 Msa0481030:CDS 35.0%
AATGGTTCAAGATGTTACTC+TGG + chr3_3:86786105-86786124 Msa0481030:intron 35.0%
! TGTGATGATGCAGGTATATT+AGG - chr3_3:86786288-86786307 None:intergenic 35.0%
! CATTAATAGGTACTGTGAGT+TGG - chr3_3:86786335-86786354 None:intergenic 35.0%
AGTAAATTTCGTGTCTTTCC+AGG - chr3_3:86786601-86786620 None:intergenic 35.0%
ACACGAAATTTACTTCCAAC+TGG + chr3_3:86786607-86786626 Msa0481030:CDS 35.0%
TCAATGTCCTCACAGAATAT+CGG - chr3_3:86786686-86786705 None:intergenic 35.0%
GCTAGGAGGAATAAAAAAAG+TGG + chr3_3:86786789-86786808 Msa0481030:three_prime_UTR 35.0%
CACAAAAGATTCCATGATTG+TGG + chr3_3:86786930-86786949 Msa0481030:three_prime_UTR 35.0%
ACAACAGCGAAAATGGAAGA+CGG + chr3_3:86781227-86781246 Msa0481030:exon 40.0%
! ATCTTCTGAGGAATTGGGAA+AGG - chr3_3:86781300-86781319 None:intergenic 40.0%
!! ATCCGATTTGGAATCTTCTG+AGG - chr3_3:86781312-86781331 None:intergenic 40.0%
!!! TCGTTCCATTTTGATTGAGG+AGG + chr3_3:86781577-86781596 Msa0481030:CDS 40.0%
!!! CCATTTTGATTGAGGAGGAT+CGG + chr3_3:86781582-86781601 Msa0481030:CDS 40.0%
!!! CATTTTGATTGAGGAGGATC+GGG + chr3_3:86781583-86781602 Msa0481030:CDS 40.0%
TGCAACGTAGTAAAATCCAC+CGG - chr3_3:86781638-86781657 None:intergenic 40.0%
TCAGGCACAAGTTCAATATC+AGG - chr3_3:86781737-86781756 None:intergenic 40.0%
! TGCCTGAAGAAGAGTTTTTC+CGG + chr3_3:86781750-86781769 Msa0481030:CDS 40.0%
!! TTATATCCTTTGGAGCATCC+CGG - chr3_3:86781772-86781791 None:intergenic 40.0%
GGATGCTCCAAAGGATATAA+AGG + chr3_3:86781772-86781791 Msa0481030:CDS 40.0%
GCTCAATTTCGAGCTATATC+AGG + chr3_3:86781841-86781860 Msa0481030:CDS 40.0%
GAGCTGATGAAAACAGCTTA+TGG - chr3_3:86782148-86782167 None:intergenic 40.0%
GCTTGTTTGAGCTTATATGC+TGG - chr3_3:86782197-86782216 None:intergenic 40.0%
TTAAATACTATGGGCCTGCT+TGG - chr3_3:86782224-86782243 None:intergenic 40.0%
GATAAGCCTGCTATTGTGTT+AGG + chr3_3:86782323-86782342 Msa0481030:intron 40.0%
TCCTTTCCTAACACAATAGC+AGG - chr3_3:86782332-86782351 None:intergenic 40.0%
!! GGTGTTATATCAGGTTGGTT+TGG + chr3_3:86782502-86782521 Msa0481030:intron 40.0%
!! TGGTTTGGCTTTAAGTATGC+TGG + chr3_3:86782517-86782536 Msa0481030:intron 40.0%
CTGCAAACATCATGCAAAAC+TGG + chr3_3:86782696-86782715 Msa0481030:CDS 40.0%
GGTTTGCAATAGTCTCCAAA+AGG - chr3_3:86782738-86782757 None:intergenic 40.0%
GACTTGTCAGGAACTTCTTT+CGG - chr3_3:86782759-86782778 None:intergenic 40.0%
!!! ATTCCTAGCTGGTTTTGTAC+AGG - chr3_3:86782820-86782839 None:intergenic 40.0%
TTGTATGCGTAATTCCTAGC+TGG - chr3_3:86782831-86782850 None:intergenic 40.0%
CAGATCAATAGGTTCTGCAA+AGG - chr3_3:86782938-86782957 None:intergenic 40.0%
CTTTGCAGAACCTATTGATC+TGG + chr3_3:86782936-86782955 Msa0481030:CDS 40.0%
CCTACAATCTCCAGATCAAT+AGG - chr3_3:86782949-86782968 None:intergenic 40.0%
CCTATTGATCTGGAGATTGT+AGG + chr3_3:86782946-86782965 Msa0481030:CDS 40.0%
CAAAAGCTTGAGCATCTTTC+AGG - chr3_3:86782975-86782994 None:intergenic 40.0%
!! AAATGGTGGATTCTAAGCTG+AGG + chr3_3:86783129-86783148 Msa0481030:intron 40.0%
!! AATGGTGGATTCTAAGCTGA+GGG + chr3_3:86783130-86783149 Msa0481030:intron 40.0%
TGTGGGAGTAAGATTATGTG+TGG - chr3_3:86783257-86783276 None:intergenic 40.0%
ATCACGCATATGAGAGATGT+GGG - chr3_3:86783274-86783293 None:intergenic 40.0%
AATCACGCATATGAGAGATG+TGG - chr3_3:86783275-86783294 None:intergenic 40.0%
ATATGCGTGATTGTGTTCGT+AGG + chr3_3:86783283-86783302 Msa0481030:intron 40.0%
AAGTCTCTCTCTTTCCATCA+TGG + chr3_3:86783562-86783581 Msa0481030:intron 40.0%
TGGACAAGCATATTTCTTCC+CGG + chr3_3:86783582-86783601 Msa0481030:intron 40.0%
TATTCATGCTTCTCCTCTAC+CGG - chr3_3:86783604-86783623 None:intergenic 40.0%
GAAAGTGATGAAGAAAGGAG+AGG + chr3_3:86783789-86783808 Msa0481030:intron 40.0%
AAGGAGAGGCAGAATTATTG+TGG + chr3_3:86783803-86783822 Msa0481030:intron 40.0%
AGGAGAGGCAGAATTATTGT+GGG + chr3_3:86783804-86783823 Msa0481030:intron 40.0%
!! AGACCATTGGTTCAATCTGA+CGG + chr3_3:86783867-86783886 Msa0481030:intron 40.0%
TTCAAGAGCTAACAATGTCC+TGG - chr3_3:86784017-86784036 None:intergenic 40.0%
TGTCATGGATAGCTCCAAAT+TGG + chr3_3:86784274-86784293 Msa0481030:CDS 40.0%
GTTCACGATGATGAAGAAGA+TGG + chr3_3:86784305-86784324 Msa0481030:CDS 40.0%
ATGGTCAGAGACGTAGAAAA+AGG + chr3_3:86784324-86784343 Msa0481030:CDS 40.0%
! GACTTTTGAATATACCCCCT+TGG - chr3_3:86784382-86784401 None:intergenic 40.0%
GGAGTAGAAGGATCTAATGA+TGG + chr3_3:86784515-86784534 Msa0481030:CDS 40.0%
GTTTGAGTGCTTTCATGTCA+TGG + chr3_3:86784602-86784621 Msa0481030:intron 40.0%
GAACTTCACGTCCTTTCAAA+TGG + chr3_3:86784760-86784779 Msa0481030:CDS 40.0%
! AGGAATTGATTTCTTGCCTG+AGG + chr3_3:86784797-86784816 Msa0481030:CDS 40.0%
AGGGACTCTTGGAGATATAA+TGG - chr3_3:86785216-86785235 None:intergenic 40.0%
CAAGATAAACTAGGGACTCT+TGG - chr3_3:86785227-86785246 None:intergenic 40.0%
!! AATTCTTTGGCTGGCTTACA+GGG + chr3_3:86785288-86785307 Msa0481030:intron 40.0%
! ACACTTTTGCAGGACAAAAG+AGG - chr3_3:86785346-86785365 None:intergenic 40.0%
TCCGGCTATCATAGATAAAG+AGG + chr3_3:86785450-86785469 Msa0481030:CDS 40.0%
! AGATAAAGAGGAGCATGTTC+AGG + chr3_3:86785462-86785481 Msa0481030:CDS 40.0%
!! GAAAATTCCGGTGTCACAAA+AGG + chr3_3:86785508-86785527 Msa0481030:CDS 40.0%
AGGAGAACTGGATAGTATGA+CGG + chr3_3:86785528-86785547 Msa0481030:CDS 40.0%
! GTCCTCTTTGGAAGTAAAGT+TGG - chr3_3:86785568-86785587 None:intergenic 40.0%
AGGTCCCTGAGTTTCAAAAA+AGG + chr3_3:86785655-86785674 Msa0481030:CDS 40.0%
!!! CATCGCCTTTTTTGAAACTC+AGG - chr3_3:86785663-86785682 None:intergenic 40.0%
CACATTTCTTTCATCTGCGT+TGG - chr3_3:86785845-86785864 None:intergenic 40.0%
! AGTTTTTGTGGTAGACCTTC+TGG + chr3_3:86786008-86786027 Msa0481030:CDS 40.0%
! GTTTTTGTGGTAGACCTTCT+GGG + chr3_3:86786009-86786028 Msa0481030:CDS 40.0%
! TTTTTGTGGTAGACCTTCTG+GGG + chr3_3:86786010-86786029 Msa0481030:CDS 40.0%
TGAACTTCGTGCAATAGAAG+CGG + chr3_3:86786070-86786089 Msa0481030:CDS 40.0%
! TTTTGTTCTTGATGGGAGTC+TGG + chr3_3:86786196-86786215 Msa0481030:intron 40.0%
! AGCAACATTTGTGATGATGC+AGG - chr3_3:86786297-86786316 None:intergenic 40.0%
! ACTGTGAGTTGGAGAAATCA+AGG - chr3_3:86786324-86786343 None:intergenic 40.0%
!! ATGACGGGTTATCATCTGAA+AGG + chr3_3:86786475-86786494 Msa0481030:CDS 40.0%
AAGGACAAATTGCACTACCT+TGG + chr3_3:86786494-86786513 Msa0481030:CDS 40.0%
! TTCTTGGGCAGATCTTTTAG+AGG + chr3_3:86786552-86786571 Msa0481030:CDS 40.0%
CTCACAGAATATCGGTATTG+TGG - chr3_3:86786678-86786697 None:intergenic 40.0%
CACAATACCGATATTCTGTG+AGG + chr3_3:86786676-86786695 Msa0481030:three_prime_UTR 40.0%
TGAAGTCAAGGAATGATGAC+GGG - chr3_3:86786721-86786740 None:intergenic 40.0%
GTGAAGTCAAGGAATGATGA+CGG - chr3_3:86786722-86786741 None:intergenic 40.0%
TCTGAGAAATTGCAGTTGCA+CGG + chr3_3:86786756-86786775 Msa0481030:three_prime_UTR 40.0%
TGCACGGATTTAAGTATGCT+AGG + chr3_3:86786772-86786791 Msa0481030:three_prime_UTR 40.0%
ACGGATTTAAGTATGCTAGG+AGG + chr3_3:86786775-86786794 Msa0481030:three_prime_UTR 40.0%
! CAACAGTTTTCATCACGGTA+GGG - chr3_3:86786827-86786846 None:intergenic 40.0%
! TCAACAGTTTTCATCACGGT+AGG - chr3_3:86786828-86786847 None:intergenic 40.0%
! CAGCTCAACAGTTTTCATCA+CGG - chr3_3:86786832-86786851 None:intergenic 40.0%
TTACTTCAATACGGCTTTCC+TGG + chr3_3:86786891-86786910 Msa0481030:three_prime_UTR 40.0%
TGAATTTAGTCGGACAGCTA+TGG + chr3_3:86786984-86787003 Msa0481030:three_prime_UTR 40.0%
AGCTATGGTAGGATGTAATG+TGG + chr3_3:86786999-86787018 Msa0481030:three_prime_UTR 40.0%
GAAGACGGTGAGATAGAAGA+AGG + chr3_3:86781242-86781261 Msa0481030:CDS 45.0%
AGAAGAAGGTTCAATCGCCA+TGG + chr3_3:86781256-86781275 Msa0481030:CDS 45.0%
GGGTGATTCTTCATCCGATT+TGG - chr3_3:86781324-86781343 None:intergenic 45.0%
AGATCGCGAAGGAGTTGTTT+AGG - chr3_3:86781425-86781444 None:intergenic 45.0%
TTTGAGTAACGAGATCGCGA+AGG - chr3_3:86781436-86781455 None:intergenic 45.0%
GACGAAGAGTGATGAAGTGA+AGG - chr3_3:86781463-86781482 None:intergenic 45.0%
TCACTTCATCACTCTTCGTC+AGG + chr3_3:86781463-86781482 Msa0481030:CDS 45.0%
CCGATCCTCCTCAATCAAAA+TGG - chr3_3:86781585-86781604 None:intergenic 45.0%
GGATCGGGTTAAAATGCAGA+CGG + chr3_3:86781598-86781617 Msa0481030:CDS 45.0%
! GCCTGAAGAAGAGTTTTTCC+GGG + chr3_3:86781751-86781770 Msa0481030:CDS 45.0%
TCCCGGAAAAACTCTTCTTC+AGG - chr3_3:86781755-86781774 None:intergenic 45.0%
TCAAACAAGCCAATCCAAGC+AGG + chr3_3:86782207-86782226 Msa0481030:intron 45.0%
GCCTGCTATTGTGTTAGGAA+AGG + chr3_3:86782328-86782347 Msa0481030:intron 45.0%
CCACATTCAGTTTGATCGAC+AGG - chr3_3:86782484-86782503 None:intergenic 45.0%
CCTGTCGATCAAACTGAATG+TGG + chr3_3:86782481-86782500 Msa0481030:intron 45.0%
!!! TAGCTGGTTTTGTACAGGCA+AGG - chr3_3:86782815-86782834 None:intergenic 45.0%
TTGCCTGTACAAAACCAGCT+AGG + chr3_3:86782814-86782833 Msa0481030:CDS 45.0%
!! ACAGCTATTGGCTCAGAAAG+AGG + chr3_3:86782912-86782931 Msa0481030:CDS 45.0%
AGTCAAGCCAATAAGGACAC+TGG + chr3_3:86783000-86783019 Msa0481030:CDS 45.0%
GTCAGAATATACACTGCCAG+CGG - chr3_3:86783091-86783110 None:intergenic 45.0%
GGCAGTGTATATTCTGACAC+CGG + chr3_3:86783093-86783112 Msa0481030:intron 45.0%
GGCTCTATTAAATCCCTTGC+CGG + chr3_3:86783151-86783170 Msa0481030:intron 45.0%
! TTTAACTGGTTCACCGGCAA+GGG - chr3_3:86783167-86783186 None:intergenic 45.0%
!! TTTTAACTGGTTCACCGGCA+AGG - chr3_3:86783168-86783187 None:intergenic 45.0%
GAAGACGACTTTCCCACATA+TGG - chr3_3:86783341-86783360 None:intergenic 45.0%
TTCACGGCATTTGCTTCATG+TGG + chr3_3:86783445-86783464 Msa0481030:intron 45.0%
TCACGGCATTTGCTTCATGT+GGG + chr3_3:86783446-86783465 Msa0481030:intron 45.0%
AGCATATTTCTTCCCGGTAG+AGG + chr3_3:86783588-86783607 Msa0481030:intron 45.0%
ATTCATGCTTCTCCTCTACC+GGG - chr3_3:86783603-86783622 None:intergenic 45.0%
! GGTAGAGGAGAAGCATGAAT+AGG + chr3_3:86783603-86783622 Msa0481030:intron 45.0%
TCACCGTCAGATTGAACCAA+TGG - chr3_3:86783873-86783892 None:intergenic 45.0%
! TTTTTCTGCTTCACCGGTGA+TGG + chr3_3:86783895-86783914 Msa0481030:intron 45.0%
GGCTCTATTAAGTCCATCAC+CGG - chr3_3:86783911-86783930 None:intergenic 45.0%
!! TCCAAAGGTATTATCCAGCC+AGG + chr3_3:86783996-86784015 Msa0481030:intron 45.0%
TCCTGGCTGGATAATACCTT+TGG - chr3_3:86784000-86784019 None:intergenic 45.0%
! TTTGGAGCTATCCATGACAG+TGG - chr3_3:86784273-86784292 None:intergenic 45.0%
AGAGACGTAGAAAAAGGCCA+AGG + chr3_3:86784330-86784349 Msa0481030:CDS 45.0%
ACGTAGAAAAAGGCCAAGGA+GGG + chr3_3:86784334-86784353 Msa0481030:CDS 45.0%
TGAATATACCCCCTTGGTCA+GGG - chr3_3:86784376-86784395 None:intergenic 45.0%
TTGAATATACCCCCTTGGTC+AGG - chr3_3:86784377-86784396 None:intergenic 45.0%
GTAATGAGTTTCGCAGGCTT+AGG - chr3_3:86784452-86784471 None:intergenic 45.0%
CTTAGCGTAATGAGTTTCGC+AGG - chr3_3:86784458-86784477 None:intergenic 45.0%
CTGCGAAACTCATTACGCTA+AGG + chr3_3:86784456-86784475 Msa0481030:CDS 45.0%
TACGCTAAGGTTTGAGTACG+TGG + chr3_3:86784469-86784488 Msa0481030:CDS 45.0%
!! GACATGAAAGCACTCAAACC+TGG - chr3_3:86784601-86784620 None:intergenic 45.0%
GCAAGAAATCAATTCCTGCC+AGG - chr3_3:86784794-86784813 None:intergenic 45.0%
CTGTCTGTACTCGATTCTGT+TGG - chr3_3:86784899-86784918 None:intergenic 45.0%
TTCTGCAGAGAATTCGCTCA+AGG + chr3_3:86784919-86784938 Msa0481030:CDS 45.0%
CTCAAGGAGAAAAGCTCAGT+TGG + chr3_3:86784935-86784954 Msa0481030:CDS 45.0%
!! GAATTCTTTGGCTGGCTTAC+AGG + chr3_3:86785287-86785306 Msa0481030:intron 45.0%
!! TGTCCTGCAAAAGTGTTCCA+TGG + chr3_3:86785350-86785369 Msa0481030:CDS 45.0%
!! GTCCTGCAAAAGTGTTCCAT+GGG + chr3_3:86785351-86785370 Msa0481030:CDS 45.0%
ACTCCCTTGTGCAAATTGGA+TGG + chr3_3:86785382-86785401 Msa0481030:CDS 45.0%
CAGCCATCCAATTTGCACAA+GGG - chr3_3:86785388-86785407 None:intergenic 45.0%
AACTTCACTAGGCACAGGTA+GGG - chr3_3:86785425-86785444 None:intergenic 45.0%
AAACTTCACTAGGCACAGGT+AGG - chr3_3:86785426-86785445 None:intergenic 45.0%
GGAGCATGTTCAGGAATCAA+TGG + chr3_3:86785471-86785490 Msa0481030:CDS 45.0%
! CAGTTCTCCTTTTGTGACAC+CGG - chr3_3:86785518-86785537 None:intergenic 45.0%
! CTGGATAGTATGACGGAAGA+TGG + chr3_3:86785535-86785554 Msa0481030:CDS 45.0%
CATCCACGAAAGAGACTTTG+TGG - chr3_3:86785779-86785798 None:intergenic 45.0%
CACAAAGTCTCTTTCGTGGA+TGG + chr3_3:86785777-86785796 Msa0481030:CDS 45.0%
! TCTCTTTCGTGGATGGATTC+TGG + chr3_3:86785784-86785803 Msa0481030:CDS 45.0%
TCAATATGGTACTCCCCAGA+AGG - chr3_3:86786026-86786045 None:intergenic 45.0%
AAGCGGAGGTAAGTACACAA+TGG + chr3_3:86786087-86786106 Msa0481030:intron 45.0%
! TGCACTACCTTGGTTGATGT+TGG + chr3_3:86786504-86786523 Msa0481030:CDS 45.0%
GCATAAGCCAACATCAACCA+AGG - chr3_3:86786514-86786533 None:intergenic 45.0%
TTATGCAAGCCTGTTAGTGG+TGG + chr3_3:86786528-86786547 Msa0481030:CDS 45.0%
TATGCAAGCCTGTTAGTGGT+GGG + chr3_3:86786529-86786548 Msa0481030:CDS 45.0%
!! TGGGCAGATCTTTTAGAGGA+AGG + chr3_3:86786556-86786575 Msa0481030:CDS 45.0%
!! GGGCAGATCTTTTAGAGGAA+GGG + chr3_3:86786557-86786576 Msa0481030:CDS 45.0%
!! CTTTTAGAGGAAGGGATCAC+CGG + chr3_3:86786565-86786584 Msa0481030:CDS 45.0%
TTCCTGGCTAGATCTTTCAG+AGG + chr3_3:86786646-86786665 Msa0481030:three_prime_UTR 45.0%
! TTCCTCTGAAAGATCTAGCC+AGG - chr3_3:86786651-86786670 None:intergenic 45.0%
TTTAGTCGGACAGCTATGGT+AGG + chr3_3:86786988-86787007 Msa0481030:three_prime_UTR 45.0%
TCACTCTTCGTCAGGTACCT+AGG + chr3_3:86781471-86781490 Msa0481030:intron 50.0%
CACTCTTCGTCAGGTACCTA+GGG + chr3_3:86781472-86781491 Msa0481030:intron 50.0%
! GTTTTTCCGGGATGCTCCAA+AGG + chr3_3:86781763-86781782 Msa0481030:CDS 50.0%
TACTATGGGCCTGCTTGGAT+TGG - chr3_3:86782219-86782238 None:intergenic 50.0%
GATGTGAAGGGAGACTTGTC+AGG - chr3_3:86782771-86782790 None:intergenic 50.0%
TGCTCGCAGTCAAGCCAATA+AGG + chr3_3:86782993-86783012 Msa0481030:CDS 50.0%
GTTACCAGTTCTATTGCCGC+TGG + chr3_3:86783072-86783091 Msa0481030:intron 50.0%
CACGGCATTTGCTTCATGTG+GGG + chr3_3:86783447-86783466 Msa0481030:intron 50.0%
TGCTTCATGTGGGGAACACT+AGG + chr3_3:86783456-86783475 Msa0481030:intron 50.0%
!! ATAGGTGGCTTCTAGGGTGA+GGG - chr3_3:86783932-86783951 None:intergenic 50.0%
!! TATAGGTGGCTTCTAGGGTG+AGG - chr3_3:86783933-86783952 None:intergenic 50.0%
AGAGCTAACAATGTCCTGGC+TGG - chr3_3:86784013-86784032 None:intergenic 50.0%
CTCAGGCATTTCCACTGTCA+TGG + chr3_3:86784259-86784278 Msa0481030:intron 50.0%
GACGTAGAAAAAGGCCAAGG+AGG + chr3_3:86784333-86784352 Msa0481030:CDS 50.0%
TCCTTGACTTCTACCCTCCT+TGG - chr3_3:86784350-86784369 None:intergenic 50.0%
AGCTCGAGCCCTGTATCATT+GGG - chr3_3:86784572-86784591 None:intergenic 50.0%
AAGCTCGAGCCCTGTATCAT+TGG - chr3_3:86784573-86784592 None:intergenic 50.0%
!! GAAAGCACTCAAACCTGGTG+TGG - chr3_3:86784596-86784615 None:intergenic 50.0%
!! AGGTGCTGAGCCCATTTGAA+AGG - chr3_3:86784774-86784793 None:intergenic 50.0%
! TTTCAAATGGGCTCAGCACC+TGG + chr3_3:86784773-86784792 Msa0481030:CDS 50.0%
GCTGCTTCACTGTTATCAGC+GGG - chr3_3:86784837-86784856 None:intergenic 50.0%
GGCTGCTTCACTGTTATCAG+CGG - chr3_3:86784838-86784857 None:intergenic 50.0%
! GTTGGCTCTTCTGTGAGTCA+CGG + chr3_3:86784953-86784972 Msa0481030:intron 50.0%
! AGCCCATGGAACACTTTTGC+AGG - chr3_3:86785356-86785375 None:intergenic 50.0%
GCACACTCCCTTGTGCAAAT+TGG + chr3_3:86785378-86785397 Msa0481030:CDS 50.0%
CCAGCCATCCAATTTGCACA+AGG - chr3_3:86785389-86785408 None:intergenic 50.0%
CCTTGTGCAAATTGGATGGC+TGG + chr3_3:86785386-86785405 Msa0481030:CDS 50.0%
GACGAAACTTCACTAGGCAC+AGG - chr3_3:86785430-86785449 None:intergenic 50.0%
GCCTAGTGAAGTTTCGTCTC+CGG + chr3_3:86785432-86785451 Msa0481030:CDS 50.0%
!! CGGTGTCACAAAAGGAGAAC+TGG + chr3_3:86785516-86785535 Msa0481030:CDS 50.0%
GTGCCACAAAGTCTCTTTCG+TGG + chr3_3:86785773-86785792 Msa0481030:CDS 50.0%
! GTGGATGGATTCTGGTGTGA+AGG + chr3_3:86785792-86785811 Msa0481030:CDS 50.0%
GCAAAAAGAGGAGGCCTTAG+AGG - chr3_3:86785984-86786003 None:intergenic 50.0%
ACTTCGTGCAATAGAAGCGG+AGG + chr3_3:86786073-86786092 Msa0481030:CDS 50.0%
GGCTTATGCAAGCCTGTTAG+TGG + chr3_3:86786525-86786544 Msa0481030:CDS 50.0%
!! CCTGTTAGTGGTGGGTTCTT+GGG + chr3_3:86786537-86786556 Msa0481030:CDS 50.0%
CTTTCCAGGAGATCGTCTTC+CGG - chr3_3:86786587-86786606 None:intergenic 50.0%
CCAGGAACCTACCACTACTT+GGG - chr3_3:86786633-86786652 None:intergenic 50.0%
AGTAAAATCCACCGGCGCCT+TGG - chr3_3:86781630-86781649 None:intergenic 55.0%
ACTGCCAGCGGCAATAGAAC+TGG - chr3_3:86783079-86783098 None:intergenic 55.0%
GCCAAGGAGGGTAGAAGTCA+AGG + chr3_3:86784346-86784365 Msa0481030:CDS 55.0%
TCAAGGAGAGCCCTGACCAA+GGG + chr3_3:86784363-86784382 Msa0481030:CDS 55.0%
GCTCGAGCCCTGTATCATTG+GGG - chr3_3:86784571-86784590 None:intergenic 55.0%
CTGTTATCAGCGGGAAGCAG+TGG - chr3_3:86784828-86784847 None:intergenic 55.0%
! AAGGGAGTGTGCAAAGCCCA+TGG - chr3_3:86785370-86785389 None:intergenic 55.0%
GGCACAGGTAGGGCTCTTAT+AGG - chr3_3:86785415-86785434 None:intergenic 55.0%
GCCGGAGACGAAACTTCACT+AGG - chr3_3:86785436-86785455 None:intergenic 55.0%
!! GCCTGTTAGTGGTGGGTTCT+TGG + chr3_3:86786536-86786555 Msa0481030:CDS 55.0%
CCCAAGAACCCACCACTAAC+AGG - chr3_3:86786540-86786559 None:intergenic 55.0%
ATCACCGGAAGACGATCTCC+TGG + chr3_3:86786580-86786599 Msa0481030:CDS 55.0%
CTTCCAACTGGCCCAAGTAG+TGG + chr3_3:86786619-86786638 Msa0481030:CDS 55.0%
CTACCACTACTTGGGCCAGT+TGG - chr3_3:86786625-86786644 None:intergenic 55.0%
CAACTGGCCCAAGTAGTGGT+AGG + chr3_3:86786623-86786642 Msa0481030:exon 55.0%
CCCAAGTAGTGGTAGGTTCC+TGG + chr3_3:86786630-86786649 Msa0481030:exon 55.0%
GCCAGGAACCTACCACTACT+TGG - chr3_3:86786634-86786653 None:intergenic 55.0%
GCTGCAGCGACCCTAGTAAT+AGG + chr3_3:86786848-86786867 Msa0481030:three_prime_UTR 55.0%
AATGCAGACGGAACGCGCCA+AGG + chr3_3:86781610-86781629 Msa0481030:CDS 60.0%
GTCAAGGAGAGCCCTGACCA+AGG + chr3_3:86784362-86784381 Msa0481030:CDS 60.0%
CAAGGAGAGCCCTGACCAAG+GGG + chr3_3:86784364-86784383 Msa0481030:CDS 60.0%
AAGGAGAGCCCTGACCAAGG+GGG + chr3_3:86784365-86784384 Msa0481030:CDS 60.0%
! AAATGGGCTCAGCACCTGGC+AGG + chr3_3:86784777-86784796 Msa0481030:CDS 60.0%
GGAAGCAGTGGAGACACCTC+AGG - chr3_3:86784816-86784835 None:intergenic 60.0%
AGGGCTCGAGCTTCCACACC+AGG + chr3_3:86784580-86784599 Msa0481030:CDS 65.0%
GACGGAACGCGCCAAGGCGC+CGG + chr3_3:86781616-86781635 Msa0481030:CDS 75.0%
!!! GGAACGCGCCAAGGCGCCGG+TGG + chr3_3:86781619-86781638 Msa0481030:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 86781141 86787073 86781141 ID=Msa0481030;Name=Msa0481030
chr3_3 mRNA 86781141 86787073 86781141 ID=Msa0481030-mRNA-1;Parent=Msa0481030;Name=Msa0481030-mRNA-1;_AED=0.09;_eAED=0.09;_QI=98|1|1|1|1|1|8|435|810
chr3_3 exon 86781141 86781484 86781141 ID=Msa0481030-mRNA-1:exon:25037;Parent=Msa0481030-mRNA-1
chr3_3 exon 86781572 86781862 86781572 ID=Msa0481030-mRNA-1:exon:25038;Parent=Msa0481030-mRNA-1
chr3_3 exon 86782685 86783021 86782685 ID=Msa0481030-mRNA-1:exon:25039;Parent=Msa0481030-mRNA-1
chr3_3 exon 86784264 86784601 86784264 ID=Msa0481030-mRNA-1:exon:25040;Parent=Msa0481030-mRNA-1
chr3_3 exon 86784714 86784964 86784714 ID=Msa0481030-mRNA-1:exon:25041;Parent=Msa0481030-mRNA-1
chr3_3 exon 86785309 86785879 86785309 ID=Msa0481030-mRNA-1:exon:25042;Parent=Msa0481030-mRNA-1
chr3_3 exon 86785960 86786094 86785960 ID=Msa0481030-mRNA-1:exon:25043;Parent=Msa0481030-mRNA-1
chr3_3 exon 86786375 86787073 86786375 ID=Msa0481030-mRNA-1:exon:25044;Parent=Msa0481030-mRNA-1
chr3_3 five_prime_UTR 86781141 86781238 86781141 ID=Msa0481030-mRNA-1:five_prime_utr;Parent=Msa0481030-mRNA-1
chr3_3 CDS 86781239 86781484 86781239 ID=Msa0481030-mRNA-1:cds;Parent=Msa0481030-mRNA-1
chr3_3 CDS 86781572 86781862 86781572 ID=Msa0481030-mRNA-1:cds;Parent=Msa0481030-mRNA-1
chr3_3 CDS 86782685 86783021 86782685 ID=Msa0481030-mRNA-1:cds;Parent=Msa0481030-mRNA-1
chr3_3 CDS 86784264 86784601 86784264 ID=Msa0481030-mRNA-1:cds;Parent=Msa0481030-mRNA-1
chr3_3 CDS 86784714 86784964 86784714 ID=Msa0481030-mRNA-1:cds;Parent=Msa0481030-mRNA-1
chr3_3 CDS 86785309 86785879 86785309 ID=Msa0481030-mRNA-1:cds;Parent=Msa0481030-mRNA-1
chr3_3 CDS 86785960 86786094 86785960 ID=Msa0481030-mRNA-1:cds;Parent=Msa0481030-mRNA-1
chr3_3 CDS 86786375 86786638 86786375 ID=Msa0481030-mRNA-1:cds;Parent=Msa0481030-mRNA-1
chr3_3 three_prime_UTR 86786639 86787073 86786639 ID=Msa0481030-mRNA-1:three_prime_utr;Parent=Msa0481030-mRNA-1
Gene Sequence

>Msa0481030

ATGGAAGACGGTGAGATAGAAGAAGGTTCAATCGCCATGGAAGAACAAAACGAACAAGCCTTTCCCAATTCCTCAGAAGATTCCAAATCGGATGAAGAATCACCCTACGAATTGCTTCAAAACAGTAAATCTTCCATTGAATCAATCATCTCCGATATCCTCTCCATCAAAAAAGAAGCTAAACCTAAACAACTCCTTCGCGATCTCGTTACTCAAATGTTCCTTCACTTCATCACTCTTCGTCAGGCAAATCGTTCCATTTTGATTGAGGAGGATCGGGTTAAAATGCAGACGGAACGCGCCAAGGCGCCGGTGGATTTTACTACGTTGCAGCTTCATAATTTGGTGTATGAGAAGAGTCATTATCTTAAAGCTATTAAGGCTTGTAAAGATTTTAAATCGAAGTATCCTGATATTGAACTTGTGCCTGAAGAAGAGTTTTTCCGGGATGCTCCAAAGGATATAAAGGATTCGGTTTTGTCTAAAGATAGTGCTCATAATTTGATGCTCAAGAGGCTCAATTTCGAGCTATATCAGCGTAAAGAGCTCTGCAAACATCATGCAAAACTGGAACAGCAAAAGAAAATCCTTTTGGAGACTATTGCAAACCGAAAGAAGTTCCTGACAAGTCTCCCTTCACATCTTAAGTCTCTTAAGAAAGCATCCTTGCCTGTACAAAACCAGCTAGGAATTACGCATACAAAGAAACTAAAGCAGCATCATTCAGCAGAGTTGCTTCCACCAGCTCTTTATGTGATTTACTCACAGCTATTGGCTCAGAAAGAGGCCTTTGCAGAACCTATTGATCTGGAGATTGTAGGAAGCCTGAAAGATGCTCAAGCTTTTGCTCGCAGTCAAGCCAATAAGGACACTGGCATTTCCACTGTCATGGATAGCTCCAAATTGGAAGATGATGTTCACGATGATGAAGAAGATGGTCAGAGACGTAGAAAAAGGCCAAGGAGGGTAGAAGTCAAGGAGAGCCCTGACCAAGGGGGTATATTCAAAAGTCACCCACTTAAAATCATTATCAATGTGTATGAAGATGAGTCTTCTGATCCTAAGCCTGCGAAACTCATTACGCTAAGGTTTGAGTACGTGGTGAAGTTGAATATTGTATGTGTTGGAGTAGAAGGATCTAATGATGGTCCTGACAATGACATCTTATGCAATTTATTCCCCAATGATACAGGGCTCGAGCTTCCACACCAGTCAGCTAAACTCTTTGTTCAAGATGCTATGGCGTTCGATACTCAGAGAACTTCACGTCCTTTCAAATGGGCTCAGCACCTGGCAGGAATTGATTTCTTGCCTGAGGTGTCTCCACTGCTTCCCGCTGATAACAGTGAAGCAGCCAAGAGTGAAGATGTTGTATCTGGTCTCACATTATATCGCCAACAGAATCGAGTACAGACAGTTCTGCAGAGAATTCGCTCAAGGAGAAAAGCTCAGTTGGCTCTTCTGGAACAGCTAGAATCTCTTACAAAACTTGAGTGGCCTCTTTTGTCCTGCAAAAGTGTTCCATGGGCTTTGCACACTCCCTTGTGCAAATTGGATGGCTGGTCACCTATAAGAGCCCTACCTGTGCCTAGTGAAGTTTCGTCTCCGGCTATCATAGATAAAGAGGAGCATGTTCAGGAATCAATGGATGTTGATGTAATTGAAAATTCCGGTGTCACAAAAGGAGAACTGGATAGTATGACGGAAGATGGCGAGCTTCCAACTTTACTTCCAAAGAGGACTAAGTTTGATCATTCCAAGCAAGCTAGCTTAATTTCAAAAAGCATCATTCCTTCACTTAATAAAGTTAGGTCCCTGAGTTTCAAAAAAGGCGATGATAGTTCTGATTTCTTGCTGGATACTGATAGTGATTTTGATGATACTGCACAAATAGAAAGTGAACATGAACATAGCGTATCTGATTACTGTGCCACAAAGTCTCTTTCGTGGATGGATTCTGGTGTGAAGGAATTTTTCCTTGTTCTTAGCAGAAAAACCAACGCAGATGAAAGAAATGTGAATCTAGAAGCCAAGATCAAGATCAGTATGGAATATCCTCTAAGGCCTCCTCTTTTTGCATTGAGTTTTTGTGGTAGACCTTCTGGGGAGTACCATATTGAGAATGATGGATTGGAATGGTACAATGAACTTCGTGCAATAGAAGCGGAGGTCAATTTACACATGCTAAAGACACTACCTGTTACTGAACATAATTACGTATTGGCTCATCAAGTGAGTTGTCTTGCCATGTTGTTCGACTATTATTTAGATGACGGGTTATCATCTGAAAGGACAAATTGCACTACCTTGGTTGATGTTGGCTTATGCAAGCCTGTTAGTGGTGGGTTCTTGGGCAGATCTTTTAGAGGAAGGGATCACCGGAAGACGATCTCCTGGAAAGACACGAAATTTACTTCCAACTGGCCCAAGTAG

Protein sequence

>Msa0481030

MEDGEIEEGSIAMEEQNEQAFPNSSEDSKSDEESPYELLQNSKSSIESIISDILSIKKEAKPKQLLRDLVTQMFLHFITLRQANRSILIEEDRVKMQTERAKAPVDFTTLQLHNLVYEKSHYLKAIKACKDFKSKYPDIELVPEEEFFRDAPKDIKDSVLSKDSAHNLMLKRLNFELYQRKELCKHHAKLEQQKKILLETIANRKKFLTSLPSHLKSLKKASLPVQNQLGITHTKKLKQHHSAELLPPALYVIYSQLLAQKEAFAEPIDLEIVGSLKDAQAFARSQANKDTGISTVMDSSKLEDDVHDDEEDGQRRRKRPRRVEVKESPDQGGIFKSHPLKIIINVYEDESSDPKPAKLITLRFEYVVKLNIVCVGVEGSNDGPDNDILCNLFPNDTGLELPHQSAKLFVQDAMAFDTQRTSRPFKWAQHLAGIDFLPEVSPLLPADNSEAAKSEDVVSGLTLYRQQNRVQTVLQRIRSRRKAQLALLEQLESLTKLEWPLLSCKSVPWALHTPLCKLDGWSPIRALPVPSEVSSPAIIDKEEHVQESMDVDVIENSGVTKGELDSMTEDGELPTLLPKRTKFDHSKQASLISKSIIPSLNKVRSLSFKKGDDSSDFLLDTDSDFDDTAQIESEHEHSVSDYCATKSLSWMDSGVKEFFLVLSRKTNADERNVNLEAKIKISMEYPLRPPLFALSFCGRPSGEYHIENDGLEWYNELRAIEAEVNLHMLKTLPVTEHNYVLAHQVSCLAMLFDYYLDDGLSSERTNCTTLVDVGLCKPVSGGFLGRSFRGRDHRKTISWKDTKFTSNWPK*