Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159710 | RHN47819.1 | 77.485 | 342 | 40 | 3 | 238 | 558 | 113 | 438 | 2.23e-175 | 513 |
| Msa1159710 | RHN47819.1 | 82.857 | 70 | 12 | 0 | 191 | 260 | 2 | 71 | 6.41e-26 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159710 | A0A396H3F3 | 77.485 | 342 | 40 | 3 | 238 | 558 | 113 | 438 | 1.07e-175 | 513 |
| Msa1159710 | A0A396H3F3 | 82.857 | 70 | 12 | 0 | 191 | 260 | 2 | 71 | 3.06e-26 | 122 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014710 | Msa1159710 | 0.819216 | 1.305107e-52 | -8.615850e-47 |
| Msa0079400 | Msa1159710 | 0.805933 | 1.050832e-49 | -8.615850e-47 |
| Msa0735170 | Msa1159710 | 0.812860 | 3.427080e-51 | -8.615850e-47 |
| Msa0760130 | Msa1159710 | 0.807530 | 4.832075e-50 | -8.615850e-47 |
| Msa0141620 | Msa1159710 | 0.804958 | 1.682724e-49 | -8.615850e-47 |
| Msa0226890 | Msa1159710 | 0.801436 | 9.013880e-49 | -8.615850e-47 |
| Msa0388960 | Msa1159710 | 0.815842 | 7.514604e-52 | -8.615850e-47 |
| Msa1075650 | Msa1159710 | 0.806124 | 9.579898e-50 | -8.615850e-47 |
| Msa1081330 | Msa1159710 | 0.800282 | 1.550481e-48 | -8.615850e-47 |
| Msa1082500 | Msa1159710 | 0.831263 | 1.842779e-55 | -8.615850e-47 |
| Msa1159710 | Msa1162550 | -0.802162 | 6.394870e-49 | -8.615850e-47 |
| Msa1159710 | Msa1224480 | 0.804301 | 2.306549e-49 | -8.615850e-47 |
| Msa1159710 | Msa1233890 | 0.807071 | 6.045011e-50 | -8.615850e-47 |
| Msa1159710 | Msa1313150 | 0.811572 | 6.548203e-51 | -8.615850e-47 |
| Msa1159710 | Msa1359040 | 0.802770 | 4.792718e-49 | -8.615850e-47 |
| Msa1159710 | Msa1372760 | 0.807303 | 5.397930e-50 | -8.615850e-47 |
| Msa1159710 | Msa1423880 | 0.808576 | 2.893343e-50 | -8.615850e-47 |
| Msa1159710 | Msa1427230 | 0.805309 | 1.420308e-49 | -8.615850e-47 |
| Msa1159710 | Msa1435270 | 0.802985 | 4.325115e-49 | -8.615850e-47 |
| Msa1159710 | Msa1439320 | 0.802849 | 4.615091e-49 | -8.615850e-47 |
| Msa1159710 | Msa1460830 | 0.806633 | 7.480737e-50 | -8.615850e-47 |
| Msa0484780 | Msa1159710 | 0.824056 | 9.925793e-54 | -8.615850e-47 |
| Msa0849030 | Msa1159710 | 0.801126 | 1.043164e-48 | -8.615850e-47 |
| Msa0969520 | Msa1159710 | 0.802430 | 5.631393e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159710 | MtrunA17_Chr7g0257131 | 77.485 | 342 | 40 | 3 | 238 | 558 | 113 | 438 | 2.05e-179 | 513 |
| Msa1159710 | MtrunA17_Chr7g0257131 | 82.857 | 70 | 12 | 0 | 191 | 260 | 2 | 71 | 5.89e-30 | 122 |
| Msa1159710 | MtrunA17_Chr7g0257141 | 83.036 | 224 | 17 | 2 | 318 | 520 | 4 | 227 | 4.58e-124 | 363 |
| Msa1159710 | MtrunA17_Chr7g0257121 | 69.417 | 206 | 49 | 2 | 2 | 193 | 4 | 209 | 1.20e-98 | 298 |
| Msa1159710 | MtrunA17_Chr1g0159641 | 64.706 | 204 | 58 | 2 | 3 | 193 | 5 | 207 | 4.90e-90 | 278 |
| Msa1159710 | MtrunA17_Chr1g0159631 | 40.927 | 259 | 80 | 8 | 169 | 360 | 4 | 256 | 2.94e-43 | 165 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159710 | AT1G77320.1 | 42.634 | 448 | 156 | 6 | 2 | 351 | 4 | 448 | 4.81e-107 | 343 |
| Msa1159710 | AT1G77320.3 | 42.634 | 448 | 156 | 6 | 2 | 351 | 4 | 448 | 6.45e-107 | 343 |
| Msa1159710 | AT1G77320.2 | 42.922 | 438 | 152 | 7 | 2 | 351 | 4 | 431 | 9.53e-103 | 331 |
Find 109 sgRNAs with CRISPR-Local
Find 464 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAGCCAGGAAAAGGATTT+TGG | 0.151641 | 7_4:-49350117 | Msa1159710:CDS |
| GCAAAGTTAGGTCCTCTTTA+TGG | 0.208714 | 7_4:-49348987 | Msa1159710:CDS |
| TATAAGGTTCTTCCTTTCTC+TGG | 0.213220 | 7_4:-49351667 | Msa1159710:CDS |
| TGAGGAGGATTGTAAGTCTA+AGG | 0.252399 | 7_4:-49348916 | Msa1159710:CDS |
| CTCCATGCCCTCTTTGAATA+TGG | 0.277578 | 7_4:+49348648 | None:intergenic |
| TTGAGCACCTCCTGTTCTTC+AGG | 0.291121 | 7_4:+49348612 | None:intergenic |
| TCATTGTCACAATATGAATA+TGG | 0.291903 | 7_4:+49350501 | None:intergenic |
| ACCAATCATGTTACAGCCTT+TGG | 0.307621 | 7_4:+49355035 | None:intergenic |
| TACAATTACGTACATGATTA+CGG | 0.311705 | 7_4:+49355167 | None:intergenic |
| AGATGAATTAATGAGCGATA+TGG | 0.314893 | 7_4:-49353017 | Msa1159710:CDS |
| CTTCACTTGCTGCTTTACTA+TGG | 0.324684 | 7_4:-49353540 | Msa1159710:CDS |
| AAGTAACTATTGGTTTCTTC+AGG | 0.330112 | 7_4:+49351743 | None:intergenic |
| GATGAATTAATGAGCGATAT+GGG | 0.345710 | 7_4:-49353016 | Msa1159710:CDS |
| AACCAGTCATAAGTAACTAT+TGG | 0.366669 | 7_4:+49351733 | None:intergenic |
| AATGGAGAAGCTAAGTAATA+TGG | 0.368421 | 7_4:-49349986 | Msa1159710:CDS |
| GATAAAGATCCACTCTGAAC+AGG | 0.374142 | 7_4:+49350174 | None:intergenic |
| CAGCAAGTGAAGGCTTGTTT+AGG | 0.374837 | 7_4:+49353551 | None:intergenic |
| TGTTCCTCAAGAGTCATATA+AGG | 0.377791 | 7_4:-49351683 | Msa1159710:CDS |
| GCCATCGGATTCAGATTCAT+TGG | 0.398872 | 7_4:+49350065 | None:intergenic |
| TTCATATTGTGACAATGAAA+TGG | 0.400609 | 7_4:-49350496 | Msa1159710:CDS |
| TATCATTTAAATACAAGCAT+TGG | 0.401217 | 7_4:+49349944 | None:intergenic |
| ATCATTTAAATACAAGCATT+GGG | 0.405407 | 7_4:+49349945 | None:intergenic |
| CTTACGCTCCGGAAGGTGAT+AGG | 0.405813 | 7_4:-49350547 | Msa1159710:intron |
| GGAAGGTGATAGGCACAAAA+AGG | 0.406593 | 7_4:-49350537 | Msa1159710:intron |
| TCAGGATCAGTCTTATCATT+AGG | 0.413206 | 7_4:+49348726 | None:intergenic |
| GATTGCAGAATATCACTTGT+TGG | 0.423098 | 7_4:-49350024 | Msa1159710:CDS |
| AAGAAAGCAATGGAGGCGTT+TGG | 0.428535 | 7_4:-49348855 | Msa1159710:CDS |
| TGGATCTTTATCTTCACATA+AGG | 0.430829 | 7_4:-49350163 | Msa1159710:CDS |
| GTCTTTAAGCGCCTTGTGAA+CGG | 0.434815 | 7_4:+49355261 | None:intergenic |
| AAAGAAGAATCTGGAAAAGA+AGG | 0.435095 | 7_4:-49349168 | Msa1159710:CDS |
| ATAAGGTTCTTCCTTTCTCT+GGG | 0.437340 | 7_4:-49351666 | Msa1159710:CDS |
| TCCAAAGGCTGTAACATGAT+TGG | 0.441332 | 7_4:-49355036 | Msa1159710:intron |
| TAATAATCAACCTGAAGAAC+AGG | 0.454496 | 7_4:-49348622 | Msa1159710:CDS |
| ATTACGCTGTTAAATCCTCT+TGG | 0.455517 | 7_4:-49349626 | Msa1159710:CDS |
| GAATAGACTTACATTTCTGT+TGG | 0.468992 | 7_4:+49349895 | None:intergenic |
| TGAGGCTTATAAGCTTTATG+AGG | 0.472144 | 7_4:-49348934 | Msa1159710:CDS |
| AAAGAGACGACAAAAGGAAA+TGG | 0.473044 | 7_4:-49349045 | Msa1159710:CDS |
| ATCAACAGTGCAACATAGCC+AGG | 0.474336 | 7_4:-49350130 | Msa1159710:CDS |
| ATGTACCAGACCTTGTACTC+TGG | 0.477285 | 7_4:+49352929 | None:intergenic |
| GATGACTTGAGGGCAAAGTT+AGG | 0.480088 | 7_4:-49348999 | Msa1159710:CDS |
| TTCAGATTCATTGGCTCTTG+AGG | 0.484552 | 7_4:+49350074 | None:intergenic |
| GCGCTTAAAGACAACGGTGC+TGG | 0.488910 | 7_4:-49355250 | Msa1159710:CDS |
| AAGATGTCGAAGTTATTTGA+AGG | 0.489072 | 7_4:-49355334 | Msa1159710:CDS |
| CACTTGCTGCTTTACTATGG+AGG | 0.490581 | 7_4:-49353537 | Msa1159710:CDS |
| GCGCGTTTGCTTCGAGATTG+CGG | 0.499064 | 7_4:-49349072 | Msa1159710:CDS |
| TATCTTCACATAAGGTGACT+TGG | 0.500794 | 7_4:-49350155 | Msa1159710:CDS |
| AGTAATATGGTGCGTAAAGG+TGG | 0.506996 | 7_4:-49349973 | Msa1159710:CDS |
| AACCAATAGTTACTTATGAC+TGG | 0.507732 | 7_4:-49351735 | Msa1159710:CDS |
| TGTTACGTACTTGAATGATC+CGG | 0.507915 | 7_4:-49348799 | Msa1159710:CDS |
| GGGTTAAAGATCTGTATGAC+TGG | 0.511162 | 7_4:-49351646 | Msa1159710:CDS |
| ATCTCTAAGCATCATGAGAT+GGG | 0.513813 | 7_4:-49348882 | Msa1159710:CDS |
| CAGATCTTTAACCCAGAGAA+AGG | 0.518375 | 7_4:+49351655 | None:intergenic |
| AAACATTGAGAACCACTTCA+AGG | 0.518932 | 7_4:-49348766 | Msa1159710:CDS |
| GGCTTATAAGCTTTATGAGG+AGG | 0.520574 | 7_4:-49348931 | Msa1159710:CDS |
| AAGAATCGACGATGACTTGA+GGG | 0.528316 | 7_4:-49349009 | Msa1159710:CDS |
| GGAATTAAAGAGACGACAAA+AGG | 0.532165 | 7_4:-49349051 | Msa1159710:CDS |
| TGAATTAATGAGCGATATGG+GGG | 0.532588 | 7_4:-49353014 | Msa1159710:CDS |
| AACATTGAGAACCACTTCAA+GGG | 0.533499 | 7_4:-49348765 | Msa1159710:CDS |
| CATTGTACCGTTGAAGAACA+TGG | 0.534774 | 7_4:+49349571 | None:intergenic |
| CATATAATTTACAACCTGCT+CGG | 0.534841 | 7_4:+49351620 | None:intergenic |
| ATATGGAGGCTCATCAGAAT+CGG | 0.535813 | 7_4:+49348665 | None:intergenic |
| CATCTCTAAGCATCATGAGA+TGG | 0.536901 | 7_4:-49348883 | Msa1159710:CDS |
| TGATTTCGATGCCGTTCACA+AGG | 0.537235 | 7_4:-49355272 | Msa1159710:CDS |
| TCAAAATCATCCCCTTGAAG+TGG | 0.537507 | 7_4:+49348754 | None:intergenic |
| GTTCTTCAATGTGCTAAAGA+AGG | 0.540178 | 7_4:-49353584 | Msa1159710:CDS |
| AGTTGACGCACATAGTAGTC+GGG | 0.543297 | 7_4:-49349921 | Msa1159710:CDS |
| AGTGCAACATAGCCAGGAAA+AGG | 0.546780 | 7_4:-49350124 | Msa1159710:CDS |
| GTGAAGGCTTGTTTAGGCAG+AGG | 0.547852 | 7_4:+49353557 | None:intergenic |
| CTAAGTAATATGGTGCGTAA+AGG | 0.550132 | 7_4:-49349976 | Msa1159710:CDS |
| ACGACAAAAGGAAATGGAGA+TGG | 0.552406 | 7_4:-49349039 | Msa1159710:CDS |
| GATGAATCTATTGCTCAAAG+AGG | 0.554272 | 7_4:-49350470 | Msa1159710:intron |
| AGATGTCGAAGTTATTTGAA+GGG | 0.554510 | 7_4:-49355333 | Msa1159710:CDS |
| TAGCCTTCGCGATATCATCA+TGG | 0.558599 | 7_4:+49355306 | None:intergenic |
| CTCCATATTCAAAGAGGGCA+TGG | 0.562554 | 7_4:-49348650 | Msa1159710:CDS |
| CAAGAATCGACGATGACTTG+AGG | 0.563439 | 7_4:-49349010 | Msa1159710:CDS |
| TTGATTATGCTGCTTCTCGT+AGG | 0.565113 | 7_4:-49349106 | Msa1159710:CDS |
| TGTTGACTTAGCTCAAGTGC+TGG | 0.568856 | 7_4:-49349129 | Msa1159710:CDS |
| AAGTTGACGCACATAGTAGT+CGG | 0.576552 | 7_4:-49349922 | Msa1159710:CDS |
| ATGAATTAATGAGCGATATG+GGG | 0.577386 | 7_4:-49353015 | Msa1159710:CDS |
| TGTATGACTGGAATCCGAGC+AGG | 0.578182 | 7_4:-49351634 | Msa1159710:intron |
| GAGGAGGATTGTAAGTCTAA+GGG | 0.581483 | 7_4:-49348915 | Msa1159710:CDS |
| CTGAATCCGATGGCAATGAT+CGG | 0.586065 | 7_4:-49350056 | Msa1159710:CDS |
| TATGAAGAACTTAAATCCAA+AGG | 0.588320 | 7_4:-49355051 | Msa1159710:CDS |
| ACAGAGTTTAAATCTGATGA+CGG | 0.589031 | 7_4:+49352974 | None:intergenic |
| AATATGGTGCGTAAAGGTGG+AGG | 0.590391 | 7_4:-49349970 | Msa1159710:CDS |
| GCCAATGAATCTGAATCCGA+TGG | 0.595581 | 7_4:-49350066 | Msa1159710:CDS |
| GATGGGATTTAAGAAAGCAA+TGG | 0.597083 | 7_4:-49348865 | Msa1159710:CDS |
| AACAAGTCCATGTTCTTCAA+CGG | 0.608126 | 7_4:-49349578 | Msa1159710:intron |
| CATGCCCTCTTTGAATATGG+AGG | 0.613126 | 7_4:+49348651 | None:intergenic |
| ATGAGCCTCCATATTCAAAG+AGG | 0.613128 | 7_4:-49348656 | Msa1159710:CDS |
| AGAACCTTATATGACTCTTG+AGG | 0.615258 | 7_4:+49351679 | None:intergenic |
| CATAGTAAAGCAGCAAGTGA+AGG | 0.617574 | 7_4:+49353541 | None:intergenic |
| ATAAAGATCCACTCTGAACA+GGG | 0.625634 | 7_4:+49350175 | None:intergenic |
| CATCTCATGATGCTTAGAGA+TGG | 0.626228 | 7_4:+49348884 | None:intergenic |
| AGATCCACTCTGAACAGGGT+AGG | 0.631294 | 7_4:+49350179 | None:intergenic |
| ACATTGAGAACCACTTCAAG+GGG | 0.633314 | 7_4:-49348764 | Msa1159710:CDS |
| ATCACAATCTTCAAGCCAAG+AGG | 0.635287 | 7_4:+49349611 | None:intergenic |
| TAATCAACCTGAAGAACAGG+AGG | 0.638857 | 7_4:-49348619 | Msa1159710:CDS |
| TAAATACCGATCATTGCCAT+CGG | 0.640715 | 7_4:+49350050 | None:intergenic |
| GGGATTTAAGAAAGCAATGG+AGG | 0.645850 | 7_4:-49348862 | Msa1159710:CDS |
| GAGTCCTACCCTGTTCAGAG+TGG | 0.662340 | 7_4:-49350183 | Msa1159710:CDS |
| TGAGCCTCCATATTCAAAGA+GGG | 0.666941 | 7_4:-49348655 | Msa1159710:CDS |
| TAACCATGATGATATCGCGA+AGG | 0.667583 | 7_4:-49355309 | Msa1159710:CDS |
| AACGGTGCTGGAATTCACAT+CGG | 0.676413 | 7_4:-49355238 | Msa1159710:CDS |
| CACAAGGCGCTTAAAGACAA+CGG | 0.682212 | 7_4:-49355256 | Msa1159710:CDS |
| TATTCAAAGAGGGCATGGAG+TGG | 0.690240 | 7_4:-49348645 | Msa1159710:CDS |
| GAATTAATGAGCGATATGGG+GGG | 0.690561 | 7_4:-49353013 | Msa1159710:CDS |
| ACGGCATCGAAATCATCATG+TGG | 0.692010 | 7_4:+49355280 | None:intergenic |
| GTAGCGAGAACTGTTGCTAG+AGG | 0.722316 | 7_4:-49349654 | Msa1159710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | NNNNNNNNNNTATAAAAATA+CGG | + | chr7_4:49353595-49353614 | None:intergenic | 0.0% |
| !!! | TTTGATTGTTAATTTTTTTT+TGG | - | chr7_4:49352090-49352109 | Msa1159710:intron | 10.0% |
| !!! | ATAAATCTTATTTTTCAAAA+TGG | - | chr7_4:49352393-49352412 | Msa1159710:intron | 10.0% |
| !! | TAAATCATAAATATAAGAAA+AGG | + | chr7_4:49354201-49354220 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_4:49353111-49353130 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_4:49353111-49353130 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_4:49353111-49353130 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_4:49353111-49353130 | None:intergenic | 100.0% |
| !! | ACAAATAATAAAATTGAACA+CGG | - | chr7_4:49349011-49349030 | Msa1159710:CDS | 15.0% |
| !!! | TTCATTTTTTCAATTTGATA+AGG | - | chr7_4:49350001-49350020 | Msa1159710:CDS | 15.0% |
| !! | TGGTATTATAAAATTAGTAA+AGG | - | chr7_4:49351601-49351620 | Msa1159710:intron | 15.0% |
| !! | GGTATTATAAAATTAGTAAA+GGG | - | chr7_4:49351602-49351621 | Msa1159710:intron | 15.0% |
| !!! | TACAAGTTTTTTTTTTTTGT+TGG | + | chr7_4:49351743-49351762 | None:intergenic | 15.0% |
| !! | ACAACTTTAATATTTACAAT+AGG | + | chr7_4:49352036-49352055 | None:intergenic | 15.0% |
| !!! | AATTATATGTTTGTTAGTAT+TGG | - | chr7_4:49352303-49352322 | Msa1159710:intron | 15.0% |
| !! | TATTTGATAAAACTATCAAA+AGG | + | chr7_4:49352475-49352494 | None:intergenic | 15.0% |
| !!! | TATATATGATTTGTTTTGTA+AGG | - | chr7_4:49352830-49352849 | Msa1159710:intron | 15.0% |
| !! | TAAATATAAGAAAAGGAATA+CGG | + | chr7_4:49354194-49354213 | None:intergenic | 15.0% |
| !!! | TATGATATTGTTTTTTCAAA+AGG | - | chr7_4:49354363-49354382 | Msa1159710:intron | 15.0% |
| !!! | TTTTCTAAGTTCTTAAATTT+AGG | - | chr7_4:49354501-49354520 | Msa1159710:intron | 15.0% |
| !! | GAAATAATTGAATCATCTTT+CGG | - | chr7_4:49349043-49349062 | Msa1159710:CDS | 20.0% |
| !!! | TTTTTTACTTTAGTTTAGAC+TGG | - | chr7_4:49349959-49349978 | Msa1159710:CDS | 20.0% |
| !! | ATATAACATATAAGCTATCT+AGG | + | chr7_4:49351095-49351114 | None:intergenic | 20.0% |
| !!! | TAAGTGTTTTTATGATACAT+TGG | + | chr7_4:49351146-49351165 | None:intergenic | 20.0% |
| !! | AATGTATCATAAAAACACTT+AGG | - | chr7_4:49351145-49351164 | Msa1159710:intron | 20.0% |
| !! | ATGTATCATAAAAACACTTA+GGG | - | chr7_4:49351146-49351165 | Msa1159710:intron | 20.0% |
| !! | AAGAAGCAATATAATATTTG+AGG | - | chr7_4:49351707-49351726 | Msa1159710:CDS | 20.0% |
| !! | TTTAATATTTACAATAGGAG+TGG | + | chr7_4:49352031-49352050 | None:intergenic | 20.0% |
| !! | AATAAGATTTATCATCTCTT+CGG | + | chr7_4:49352385-49352404 | None:intergenic | 20.0% |
| !!! | AATCTTATTTTTCAAAATGG+TGG | - | chr7_4:49352396-49352415 | Msa1159710:intron | 20.0% |
| !! | ATTATTATTTGTGCAAGATA+AGG | + | chr7_4:49352696-49352715 | None:intergenic | 20.0% |
| !! | GAATATTATAACAACATAGA+TGG | - | chr7_4:49353055-49353074 | Msa1159710:intron | 20.0% |
| !! | ATCATTTAAATACAAGCATT+GGG | + | chr7_4:49353967-49353986 | None:intergenic | 20.0% |
| !! | TATCATTTAAATACAAGCAT+TGG | + | chr7_4:49353968-49353987 | None:intergenic | 20.0% |
| !!! | ATATGCATTTTTGTTTTTAC+AGG | - | chr7_4:49354220-49354239 | Msa1159710:intron | 20.0% |
| !!! | TATGCATTTTTGTTTTTACA+GGG | - | chr7_4:49354221-49354240 | Msa1159710:intron | 20.0% |
| !!! | ATTTAGGTATAGTCTTTTTT+AGG | - | chr7_4:49354517-49354536 | Msa1159710:intron | 20.0% |
| !! | GACTTTATTAATTGTTTGAA+TGG | - | chr7_4:49354676-49354695 | Msa1159710:intron | 20.0% |
| !! | AAAATCATTTTCAGAGTTGT+GGG | + | chr7_4:49348708-49348727 | None:intergenic | 25.0% |
| ! | TACAATTACGTACATGATTA+CGG | + | chr7_4:49348745-49348764 | None:intergenic | 25.0% |
| ! | TATGAAGAACTTAAATCCAA+AGG | - | chr7_4:49348858-49348877 | Msa1159710:CDS | 25.0% |
| ! | TCCATTAAATGTAATGTTGT+CGG | - | chr7_4:49349699-49349718 | Msa1159710:intron | 25.0% |
| ! | ATGACATAACAAAACTTCAA+TGG | + | chr7_4:49349857-49349876 | None:intergenic | 25.0% |
| !!! | TTGAAGTTTTGTTATGTCAT+AGG | - | chr7_4:49349857-49349876 | Msa1159710:intron | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | - | chr7_4:49350095-49350114 | Msa1159710:CDS | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | + | chr7_4:49350095-49350114 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr7_4:49350169-49350188 | Msa1159710:CDS | 25.0% |
| !!! | AGTTATGTTGATTTTCATAG+TGG | - | chr7_4:49350240-49350259 | Msa1159710:intron | 25.0% |
| ! | TGTTTCGTTTATTATTGTGT+AGG | - | chr7_4:49350292-49350311 | Msa1159710:intron | 25.0% |
| !!! | AAGTTTTCAGTTATTTCTCT+TGG | - | chr7_4:49350786-49350805 | Msa1159710:intron | 25.0% |
| !! | TGTCATTGTGAAAAATGTTT+TGG | - | chr7_4:49350955-49350974 | Msa1159710:intron | 25.0% |
| ! | AGGAATATGAATAATTCAGA+AGG | + | chr7_4:49351075-49351094 | None:intergenic | 25.0% |
| !! | GCATTAATTAACTCTACTTT+TGG | - | chr7_4:49351246-49351265 | Msa1159710:intron | 25.0% |
| !! | TTTATTTGCTCTCTTTTCAT+TGG | - | chr7_4:49351389-49351408 | Msa1159710:intron | 25.0% |
| ! | AAAACAATAGAGAGAGAAAA+AGG | - | chr7_4:49351415-49351434 | Msa1159710:intron | 25.0% |
| ! | GTCAAAAAGTTGTAATAAAG+TGG | - | chr7_4:49351482-49351501 | Msa1159710:intron | 25.0% |
| ! | GATTTATCTTGAACTAAAGA+TGG | - | chr7_4:49351527-49351546 | Msa1159710:intron | 25.0% |
| !!! | TCACTGGTTGTATTATTTTA+TGG | - | chr7_4:49351581-49351600 | Msa1159710:intron | 25.0% |
| ! | AGTAAATAATGCAACAAAAG+TGG | - | chr7_4:49351796-49351815 | Msa1159710:intron | 25.0% |
| !!! | AAAATGTTTGTTGTAACCAA+CGG | + | chr7_4:49351850-49351869 | None:intergenic | 25.0% |
| !!! | AGTTCATATGTTTTGTTTCT+TGG | - | chr7_4:49351952-49351971 | Msa1159710:intron | 25.0% |
| ! | ATAAGATTTATCATCTCTTC+GGG | + | chr7_4:49352384-49352403 | None:intergenic | 25.0% |
| !! | TCTTTCACATTTTTGCTTTA+AGG | - | chr7_4:49352610-49352629 | Msa1159710:intron | 25.0% |
| ! | GAAAATGTTAATGTACACAT+GGG | + | chr7_4:49352674-49352693 | None:intergenic | 25.0% |
| !!! | ATATGCTTTTTGATACTGTA+AGG | - | chr7_4:49352716-49352735 | Msa1159710:intron | 25.0% |
| ! | TTATTAATAAGTGCGAACAA+GGG | + | chr7_4:49352745-49352764 | None:intergenic | 25.0% |
| ! | ATTATTAATAAGTGCGAACA+AGG | + | chr7_4:49352746-49352765 | None:intergenic | 25.0% |
| ! | GTGGGAAATATATAGAAAAA+TGG | - | chr7_4:49352948-49352967 | Msa1159710:CDS | 25.0% |
| ! | AACTCAAAAATTGTATTTGG+GGG | + | chr7_4:49353135-49353154 | None:intergenic | 25.0% |
| ! | GAACTCAAAAATTGTATTTG+GGG | + | chr7_4:49353136-49353155 | None:intergenic | 25.0% |
| ! | GGAACTCAAAAATTGTATTT+GGG | + | chr7_4:49353137-49353156 | None:intergenic | 25.0% |
| ! | AATTCAAAGATCTGTTATTG+AGG | - | chr7_4:49353304-49353323 | Msa1159710:intron | 25.0% |
| ! | TCATTGTCACAATATGAATA+TGG | + | chr7_4:49353411-49353430 | None:intergenic | 25.0% |
| ! | TTCATATTGTGACAATGAAA+TGG | - | chr7_4:49353413-49353432 | Msa1159710:intron | 25.0% |
| !!! | ATTTTTGTTTTTACAGGGAA+AGG | - | chr7_4:49354226-49354245 | Msa1159710:intron | 25.0% |
| !!! | TTTTTGTTTTTACAGGGAAA+GGG | - | chr7_4:49354227-49354246 | Msa1159710:intron | 25.0% |
| !!! | CTACTTTTTGGTTATCTATT+AGG | - | chr7_4:49354426-49354445 | Msa1159710:intron | 25.0% |
| !!! | TATAGTCTTTTTTAGGAGTT+TGG | - | chr7_4:49354524-49354543 | Msa1159710:intron | 25.0% |
| ! | AATTAATAAAGTCGACGAAT+TGG | + | chr7_4:49354669-49354688 | None:intergenic | 25.0% |
| ! | ATTAATTGTTTGAATGGTTC+AGG | - | chr7_4:49354682-49354701 | Msa1159710:intron | 25.0% |
| ! | TAGGATAAAAAAGAAGAATC+TGG | - | chr7_4:49354732-49354751 | Msa1159710:intron | 25.0% |
| !!! | TCAATCTTCAACTCATTTTT+AGG | + | chr7_4:49354958-49354977 | None:intergenic | 25.0% |
| !! | TAAAAATGAGTTGAAGATTG+AGG | - | chr7_4:49354957-49354976 | Msa1159710:intron | 25.0% |
| !! | TCAATGTTTTCTTTTCTAAC+CGG | + | chr7_4:49355132-49355151 | None:intergenic | 25.0% |
| ! | GAAAATCATTTTCAGAGTTG+TGG | + | chr7_4:49348709-49348728 | None:intergenic | 30.0% |
| CATAATGCACAGTGATAATA+AGG | + | chr7_4:49348907-49348926 | None:intergenic | 30.0% | |
| ! | TTTCTCGTTTGAAGTTAACA+CGG | + | chr7_4:49349449-49349468 | None:intergenic | 30.0% |
| TTCAGACTATGAAAAGCTTT+GGG | + | chr7_4:49349679-49349698 | None:intergenic | 30.0% | |
| ATTCAGACTATGAAAAGCTT+TGG | + | chr7_4:49349680-49349699 | None:intergenic | 30.0% | |
| ACCGACAACATTACATTTAA+TGG | + | chr7_4:49349703-49349722 | None:intergenic | 30.0% | |
| ! | TGAAGGGAAGAATTTTCTTA+TGG | - | chr7_4:49349932-49349951 | Msa1159710:CDS | 30.0% |
| ! | GTTTTGCTTATAATAGTGAC+CGG | + | chr7_4:49350060-49350079 | None:intergenic | 30.0% |
| GATGTATGTGGTCTTTATTA+TGG | + | chr7_4:49350122-49350141 | None:intergenic | 30.0% | |
| GTGTATATAAACATAGAGTG+TGG | + | chr7_4:49350216-49350235 | None:intergenic | 30.0% | |
| ATGAGCGTTTCAATAAAAGT+GGG | + | chr7_4:49350766-49350785 | None:intergenic | 30.0% | |
| TATGAGCGTTTCAATAAAAG+TGG | + | chr7_4:49350767-49350786 | None:intergenic | 30.0% | |
| AGATGAATTAATGAGCGATA+TGG | - | chr7_4:49350892-49350911 | Msa1159710:intron | 30.0% | |
| GATGAATTAATGAGCGATAT+GGG | - | chr7_4:49350893-49350912 | Msa1159710:intron | 30.0% | |
| ATGAATTAATGAGCGATATG+GGG | - | chr7_4:49350894-49350913 | Msa1159710:intron | 30.0% | |
| ACAGAGTTTAAATCTGATGA+CGG | + | chr7_4:49350938-49350957 | None:intergenic | 30.0% | |
| ! | ATACACCTTTTTATTCTTCC+TGG | - | chr7_4:49351024-49351043 | Msa1159710:intron | 30.0% |
| TTTATGATACATTGGAGGAT+AGG | + | chr7_4:49351138-49351157 | None:intergenic | 30.0% | |
| !! | GTGTTTTTATGATACATTGG+AGG | + | chr7_4:49351143-49351162 | None:intergenic | 30.0% |
| GTGATATATGTACAACCATT+TGG | - | chr7_4:49351347-49351366 | Msa1159710:intron | 30.0% | |
| ! | TTACAACAAACATTTTTCGC+TGG | - | chr7_4:49351854-49351873 | Msa1159710:intron | 30.0% |
| !!! | CGTTCATTTCTTTTTTTGCT+TGG | - | chr7_4:49351877-49351896 | Msa1159710:intron | 30.0% |
| GTGGCTAATATGATTCTTAA+TGG | - | chr7_4:49351929-49351948 | Msa1159710:intron | 30.0% | |
| ! | TGGTCTATCTCATTTAGTTT+AGG | - | chr7_4:49351972-49351991 | Msa1159710:intron | 30.0% |
| ! | GGTCTATCTCATTTAGTTTA+GGG | - | chr7_4:49351973-49351992 | Msa1159710:intron | 30.0% |
| ! | ATCTCATTTAGTTTAGGGTT+TGG | - | chr7_4:49351978-49351997 | Msa1159710:intron | 30.0% |
| AATATACACCACATTATGTC+TGG | - | chr7_4:49352126-49352145 | Msa1159710:intron | 30.0% | |
| !! | AAGTAACTATTGGTTTCTTC+AGG | + | chr7_4:49352169-49352188 | None:intergenic | 30.0% |
| AACCAATAGTTACTTATGAC+TGG | - | chr7_4:49352174-49352193 | Msa1159710:intron | 30.0% | |
| AACCAGTCATAAGTAACTAT+TGG | + | chr7_4:49352179-49352198 | None:intergenic | 30.0% | |
| CATATAATTTACAACCTGCT+CGG | + | chr7_4:49352292-49352311 | None:intergenic | 30.0% | |
| ! | GATTTTCTCTCATCTTTTCA+TGG | + | chr7_4:49352535-49352554 | None:intergenic | 30.0% |
| GGAAAATGTTAATGTACACA+TGG | + | chr7_4:49352675-49352694 | None:intergenic | 30.0% | |
| TAAAAACCTGTCTTCACAAA+AGG | + | chr7_4:49352812-49352831 | None:intergenic | 30.0% | |
| ACTCAAAAATTGTATTTGGG+GGG | + | chr7_4:49353134-49353153 | None:intergenic | 30.0% | |
| GGGAACTCAAAAATTGTATT+TGG | + | chr7_4:49353138-49353157 | None:intergenic | 30.0% | |
| !! | TAATCCTTAAGGCTTTGTTT+AGG | + | chr7_4:49353187-49353206 | None:intergenic | 30.0% |
| AAAAGGGATACTAATCCTTA+AGG | + | chr7_4:49353198-49353217 | None:intergenic | 30.0% | |
| ACTGTTACCATAGATAAGTT+TGG | - | chr7_4:49353547-49353566 | Msa1159710:CDS | 30.0% | |
| TGGATCTTTATCTTCACATA+AGG | - | chr7_4:49353746-49353765 | Msa1159710:intron | 30.0% | |
| !!! | TGGTTTTGAAGCTTATGAAA+TGG | - | chr7_4:49353905-49353924 | Msa1159710:intron | 30.0% |
| AATGGAGAAGCTAAGTAATA+TGG | - | chr7_4:49353923-49353942 | Msa1159710:intron | 30.0% | |
| GAATAGACTTACATTTCTGT+TGG | + | chr7_4:49354017-49354036 | None:intergenic | 30.0% | |
| GCTTTCCTATGGATTTAATT+TGG | - | chr7_4:49354164-49354183 | Msa1159710:intron | 30.0% | |
| GTTTGCCAAATTAAATCCAT+AGG | + | chr7_4:49354172-49354191 | None:intergenic | 30.0% | |
| !! | TGTGTTCTTTGTCTACTTTT+TGG | - | chr7_4:49354414-49354433 | Msa1159710:intron | 30.0% |
| AAAGAAGAATCTGGAAAAGA+AGG | - | chr7_4:49354741-49354760 | Msa1159710:intron | 30.0% | |
| !! | TCAACTCATTTTTAGGCTTT+TGG | + | chr7_4:49354951-49354970 | None:intergenic | 30.0% |
| ! | GAAACAAATTTTGCAACATC+AGG | + | chr7_4:49355204-49355223 | None:intergenic | 30.0% |
| TAATAATCAACCTGAAGAAC+AGG | - | chr7_4:49355287-49355306 | Msa1159710:CDS | 30.0% | |
| TCATCAACATCATATCCGAT+CGG | + | chr7_4:49348805-49348824 | None:intergenic | 35.0% | |
| TCAATAGCACAGACATTGTA+TGG | + | chr7_4:49349072-49349091 | None:intergenic | 35.0% | |
| ! | ATACAATGTCTGTGCTATTG+AGG | - | chr7_4:49349071-49349090 | Msa1159710:CDS | 35.0% |
| AAGAAACTAAGTATGAAGCC+TGG | + | chr7_4:49349406-49349425 | None:intergenic | 35.0% | |
| ATAAAACGATCCTCGGTAAA+TGG | - | chr7_4:49349579-49349598 | Msa1159710:CDS | 35.0% | |
| TAAAACGATCCTCGGTAAAT+GGG | - | chr7_4:49349580-49349599 | Msa1159710:CDS | 35.0% | |
| TGGAAATGTTCTATACGACT+CGG | + | chr7_4:49349613-49349632 | None:intergenic | 35.0% | |
| ! | TTTAGTTTAGACTGGACAGT+TGG | - | chr7_4:49349967-49349986 | Msa1159710:CDS | 35.0% |
| GTTCTTCAATGTGCTAAAGA+AGG | - | chr7_4:49350325-49350344 | Msa1159710:intron | 35.0% | |
| ! | AGTAGGATTTCAAAGGGTTT+TGG | + | chr7_4:49350674-49350693 | None:intergenic | 35.0% |
| TTTGCGAGTAGGATTTCAAA+GGG | + | chr7_4:49350680-49350699 | None:intergenic | 35.0% | |
| ATGGAGAAGAATATGCCTAA+GGG | + | chr7_4:49350707-49350726 | None:intergenic | 35.0% | |
| TATGGAGAAGAATATGCCTA+AGG | + | chr7_4:49350708-49350727 | None:intergenic | 35.0% | |
| TAGGCATATTCTTCTCCATA+TGG | - | chr7_4:49350708-49350727 | Msa1159710:intron | 35.0% | |
| TTTGAGAGCAAAAACAGGAA+CGG | + | chr7_4:49350831-49350850 | None:intergenic | 35.0% | |
| !!! | TTCCTGTTTTTGCTCTCAAA+TGG | - | chr7_4:49350831-49350850 | Msa1159710:intron | 35.0% |
| TTCCATTTGAGAGCAAAAAC+AGG | + | chr7_4:49350836-49350855 | None:intergenic | 35.0% | |
| ATTCATCTATCTTAACCTGC+AGG | + | chr7_4:49350880-49350899 | None:intergenic | 35.0% | |
| TGAATTAATGAGCGATATGG+GGG | - | chr7_4:49350895-49350914 | Msa1159710:intron | 35.0% | |
| ACTAGCCAGGAAGAATAAAA+AGG | + | chr7_4:49351032-49351051 | None:intergenic | 35.0% | |
| ! | TTTTATTCTTCCTGGCTAGT+TGG | - | chr7_4:49351032-49351051 | Msa1159710:intron | 35.0% |
| ! | AATTCAGAAGGTATGTCAGA+AGG | + | chr7_4:49351063-49351082 | None:intergenic | 35.0% |
| !! | TGTAAAAAGCATCTAGTCCA+AGG | - | chr7_4:49351200-49351219 | Msa1159710:intron | 35.0% |
| !! | GTAAAAAGCATCTAGTCCAA+GGG | - | chr7_4:49351201-49351220 | Msa1159710:intron | 35.0% |
| AGGAAGATTCTGGTCATATT+TGG | - | chr7_4:49351224-49351243 | Msa1159710:intron | 35.0% | |
| !! | CTACTTTTGGCTAGTAGTTT+AGG | - | chr7_4:49351259-49351278 | Msa1159710:intron | 35.0% |
| ! | GGTAGCAGTACAAATCTTTT+AGG | - | chr7_4:49351280-49351299 | Msa1159710:intron | 35.0% |
| GTCATCAAAGTTGTACCAAA+TGG | + | chr7_4:49351365-49351384 | None:intergenic | 35.0% | |
| TGAAGCTTATGTTAGTTCAC+TGG | - | chr7_4:49351565-49351584 | Msa1159710:intron | 35.0% | |
| TGGTTTATGTCCCAAATTGT+TGG | - | chr7_4:49351897-49351916 | Msa1159710:intron | 35.0% | |
| GGTTTATGTCCCAAATTGTT+GGG | - | chr7_4:49351898-49351917 | Msa1159710:intron | 35.0% | |
| GTTTATGTCCCAAATTGTTG+GGG | - | chr7_4:49351899-49351918 | Msa1159710:intron | 35.0% | |
| TGTTCCTCAAGAGTCATATA+AGG | - | chr7_4:49352226-49352245 | Msa1159710:intron | 35.0% | |
| AGAACCTTATATGACTCTTG+AGG | + | chr7_4:49352233-49352252 | None:intergenic | 35.0% | |
| TATAAGGTTCTTCCTTTCTC+TGG | - | chr7_4:49352242-49352261 | Msa1159710:intron | 35.0% | |
| ATAAGGTTCTTCCTTTCTCT+GGG | - | chr7_4:49352243-49352262 | Msa1159710:intron | 35.0% | |
| !! | TTAGGCTTTGTTTGGAAGTT+TGG | - | chr7_4:49352904-49352923 | Msa1159710:intron | 35.0% |
| TCAAAAATTGTATTTGGGGG+GGG | + | chr7_4:49353132-49353151 | None:intergenic | 35.0% | |
| CTCAAAAATTGTATTTGGGG+GGG | + | chr7_4:49353133-49353152 | None:intergenic | 35.0% | |
| !! | TAAGGCTTTGTTTAGGAGTT+TGG | + | chr7_4:49353180-49353199 | None:intergenic | 35.0% |
| AACTCCTAAACAAAGCCTTA+AGG | - | chr7_4:49353180-49353199 | Msa1159710:intron | 35.0% | |
| ! | CACTGATTGGAAGTACAAAA+GGG | + | chr7_4:49353214-49353233 | None:intergenic | 35.0% |
| ! | TCACTGATTGGAAGTACAAA+AGG | + | chr7_4:49353215-49353234 | None:intergenic | 35.0% |
| TGTACTTCCAATCAGTGAAA+AGG | - | chr7_4:49353217-49353236 | Msa1159710:intron | 35.0% | |
| ACTGAATTATTCAGTCAGAG+AGG | + | chr7_4:49353279-49353298 | None:intergenic | 35.0% | |
| CTGTTATTGAGGTTTGAATG+TGG | - | chr7_4:49353315-49353334 | Msa1159710:intron | 35.0% | |
| GCACAAAAAGGCAAAACTTT+GGG | - | chr7_4:49353384-49353403 | Msa1159710:intron | 35.0% | |
| CACAAAAAGGCAAAACTTTG+GGG | - | chr7_4:49353385-49353404 | Msa1159710:intron | 35.0% | |
| GATGAATCTATTGCTCAAAG+AGG | - | chr7_4:49353439-49353458 | Msa1159710:intron | 35.0% | |
| TGCTTTAATGCTGTATGTTG+TGG | - | chr7_4:49353471-49353490 | Msa1159710:intron | 35.0% | |
| ATAAAGATCCACTCTGAACA+GGG | + | chr7_4:49353737-49353756 | None:intergenic | 35.0% | |
| TATCTTCACATAAGGTGACT+TGG | - | chr7_4:49353754-49353773 | Msa1159710:intron | 35.0% | |
| ! | ATAGCCAGGAAAAGGATTTT+GGG | - | chr7_4:49353793-49353812 | Msa1159710:intron | 35.0% |
| TAAATACCGATCATTGCCAT+CGG | + | chr7_4:49353862-49353881 | None:intergenic | 35.0% | |
| GATTGCAGAATATCACTTGT+TGG | - | chr7_4:49353885-49353904 | Msa1159710:intron | 35.0% | |
| CTAAGTAATATGGTGCGTAA+AGG | - | chr7_4:49353933-49353952 | Msa1159710:intron | 35.0% | |
| GTATCAATGTAGATGATTCC+TGG | - | chr7_4:49354121-49354140 | Msa1159710:intron | 35.0% | |
| !! | CATTTCTGAAACTAACATCC+AGG | + | chr7_4:49354142-49354161 | None:intergenic | 35.0% |
| ! | GGATGTTAGTTTCAGAAATG+TGG | - | chr7_4:49354142-49354161 | Msa1159710:intron | 35.0% |
| ATTACGCTGTTAAATCCTCT+TGG | - | chr7_4:49354283-49354302 | Msa1159710:intron | 35.0% | |
| AACAAGTCCATGTTCTTCAA+CGG | - | chr7_4:49354331-49354350 | Msa1159710:intron | 35.0% | |
| !!! | AGTCTTTTTTAGGAGTTTGG+AGG | - | chr7_4:49354527-49354546 | Msa1159710:intron | 35.0% |
| !!! | GTCTTTTTTAGGAGTTTGGA+GGG | - | chr7_4:49354528-49354547 | Msa1159710:intron | 35.0% |
| !!! | TCTTTTTTAGGAGTTTGGAG+GGG | - | chr7_4:49354529-49354548 | Msa1159710:intron | 35.0% |
| ACGAATTGGCAGAAATCATA+AGG | + | chr7_4:49354655-49354674 | None:intergenic | 35.0% | |
| GGAATTAAAGAGACGACAAA+AGG | - | chr7_4:49354858-49354877 | Msa1159710:intron | 35.0% | |
| AAAGAGACGACAAAAGGAAA+TGG | - | chr7_4:49354864-49354883 | Msa1159710:intron | 35.0% | |
| ! | TGAGGCTTATAAGCTTTATG+AGG | - | chr7_4:49354975-49354994 | Msa1159710:intron | 35.0% |
| ATCTCTAAGCATCATGAGAT+GGG | - | chr7_4:49355027-49355046 | Msa1159710:intron | 35.0% | |
| GATGGGATTTAAGAAAGCAA+TGG | - | chr7_4:49355044-49355063 | Msa1159710:CDS | 35.0% | |
| TGTTACGTACTTGAATGATC+CGG | - | chr7_4:49355110-49355129 | Msa1159710:intron | 35.0% | |
| AAACATTGAGAACCACTTCA+AGG | - | chr7_4:49355143-49355162 | Msa1159710:intron | 35.0% | |
| AACATTGAGAACCACTTCAA+GGG | - | chr7_4:49355144-49355163 | Msa1159710:intron | 35.0% | |
| ! | TCAGGATCAGTCTTATCATT+AGG | + | chr7_4:49355186-49355205 | None:intergenic | 35.0% |
| TAACCATGATGATATCGCGA+AGG | - | chr7_4:49348600-49348619 | Msa1159710:CDS | 40.0% | |
| ! | TCATTTTCAGAGTTGTGGGA+AGG | + | chr7_4:49348704-49348723 | None:intergenic | 40.0% |
| CATCAATATCACTCTCCGAT+CGG | - | chr7_4:49348787-49348806 | Msa1159710:CDS | 40.0% | |
| TCCAAAGGCTGTAACATGAT+TGG | - | chr7_4:49348873-49348892 | Msa1159710:CDS | 40.0% | |
| ACCAATCATGTTACAGCCTT+TGG | + | chr7_4:49348877-49348896 | None:intergenic | 40.0% | |
| TGTAGTATACACACGAACAC+TGG | - | chr7_4:49348962-49348981 | Msa1159710:CDS | 40.0% | |
| TGGACAAATTCAGGGAAGTT+GGG | + | chr7_4:49349119-49349138 | None:intergenic | 40.0% | |
| GATGTCCTTAAAACACCTGA+TGG | + | chr7_4:49349167-49349186 | None:intergenic | 40.0% | |
| GAAGAAGTAAGGGTTGAGAT+AGG | + | chr7_4:49349212-49349231 | None:intergenic | 40.0% | |
| AGTCTGTGACGAAGAAGTAA+GGG | + | chr7_4:49349222-49349241 | None:intergenic | 40.0% | |
| TAAGTATGAAGCCTGGAGTT+TGG | + | chr7_4:49349399-49349418 | None:intergenic | 40.0% | |
| AGATTACCTAACAAACCCCT+CGG | - | chr7_4:49349525-49349544 | Msa1159710:intron | 40.0% | |
| ! | GGATCGTTTTATCAACACCA+AGG | + | chr7_4:49349571-49349590 | None:intergenic | 40.0% |
| !! | GGTGTTGATAAAACGATCCT+CGG | - | chr7_4:49349572-49349591 | Msa1159710:intron | 40.0% |
| ! | AATGTTCTATACGACTCGGA+GGG | + | chr7_4:49349609-49349628 | None:intergenic | 40.0% |
| ! | AAATGTTCTATACGACTCGG+AGG | + | chr7_4:49349610-49349629 | None:intergenic | 40.0% |
| !! | TGTCTCTGTGTTGTTTCTGT+CGG | - | chr7_4:49349785-49349804 | Msa1159710:intron | 40.0% |
| ACTTTCGTCACGTGATATGA+AGG | - | chr7_4:49349915-49349934 | Msa1159710:CDS | 40.0% | |
| CTTTCGTCACGTGATATGAA+GGG | - | chr7_4:49349916-49349935 | Msa1159710:CDS | 40.0% | |
| GATGATCTATATACACCCTC+CGG | - | chr7_4:49350038-49350057 | Msa1159710:CDS | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr7_4:49350173-49350192 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr7_4:49350172-49350191 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr7_4:49350172-49350191 | Msa1159710:CDS | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr7_4:49350173-49350192 | Msa1159710:CDS | 40.0% | |
| GTGTTTGAATATACACCCTC+CGG | + | chr7_4:49350191-49350210 | None:intergenic | 40.0% | |
| CATAGTAAAGCAGCAAGTGA+AGG | + | chr7_4:49350371-49350390 | None:intergenic | 40.0% | |
| !! | CTTCACTTGCTGCTTTACTA+TGG | - | chr7_4:49350369-49350388 | Msa1159710:intron | 40.0% |
| !!! | TGTCGCAAGTTGCTTTTTGA+AGG | - | chr7_4:49350487-49350506 | Msa1159710:CDS | 40.0% |
| !!! | GTCGCAAGTTGCTTTTTGAA+GGG | - | chr7_4:49350488-49350507 | Msa1159710:CDS | 40.0% |
| !!! | TCGCAAGTTGCTTTTTGAAG+GGG | - | chr7_4:49350489-49350508 | Msa1159710:CDS | 40.0% |
| !!! | GTTGCTTTTTGAAGGGGTTT+TGG | - | chr7_4:49350495-49350514 | Msa1159710:CDS | 40.0% |
| !!! | CTTTTTGAAGGGGTTTTGGA+GGG | - | chr7_4:49350499-49350518 | Msa1159710:CDS | 40.0% |
| !!! | AGGGCTAAGTTGGTTTTGAA+GGG | - | chr7_4:49350518-49350537 | Msa1159710:CDS | 40.0% |
| !!! | GGATTTCAAAGGGTTTTGGA+GGG | + | chr7_4:49350670-49350689 | None:intergenic | 40.0% |
| !! | AGGATTTCAAAGGGTTTTGG+AGG | + | chr7_4:49350671-49350690 | None:intergenic | 40.0% |
| GTTTGCGAGTAGGATTTCAA+AGG | + | chr7_4:49350681-49350700 | None:intergenic | 40.0% | |
| TCTTGGACTTGTCAACCATA+TGG | + | chr7_4:49350726-49350745 | None:intergenic | 40.0% | |
| TTGACAAGTCCAAGACTACT+TGG | - | chr7_4:49350731-49350750 | Msa1159710:intron | 40.0% | |
| TGACAAGTCCAAGACTACTT+GGG | - | chr7_4:49350732-49350751 | Msa1159710:intron | 40.0% | |
| AATGAAAGCCCAAGTAGTCT+TGG | + | chr7_4:49350743-49350762 | None:intergenic | 40.0% | |
| TTGAGAGCAAAAACAGGAAC+GGG | + | chr7_4:49350830-49350849 | None:intergenic | 40.0% | |
| GAATTAATGAGCGATATGGG+GGG | - | chr7_4:49350896-49350915 | Msa1159710:intron | 40.0% | |
| TTTATTCCTTTATGCGCCGT+TGG | - | chr7_4:49351831-49351850 | Msa1159710:intron | 40.0% | |
| CCACAAATCCCCAACAATTT+GGG | + | chr7_4:49351910-49351929 | None:intergenic | 40.0% | |
| ACCACAAATCCCCAACAATT+TGG | + | chr7_4:49351911-49351930 | None:intergenic | 40.0% | |
| AAATTGTTGGGGATTTGTGG+TGG | - | chr7_4:49351910-49351929 | Msa1159710:intron | 40.0% | |
| ATCTCAACACTGCATCTAGA+TGG | - | chr7_4:49352005-49352024 | Msa1159710:intron | 40.0% | |
| GCTTGCAATCACAATCTTTG+AGG | - | chr7_4:49352063-49352082 | Msa1159710:intron | 40.0% | |
| CAGATCTTTAACCCAGAGAA+AGG | + | chr7_4:49352257-49352276 | None:intergenic | 40.0% | |
| GGGTTAAAGATCTGTATGAC+TGG | - | chr7_4:49352263-49352282 | Msa1159710:intron | 40.0% | |
| ATTCTCTGCAGATCTGACAA+AGG | - | chr7_4:49352422-49352441 | Msa1159710:intron | 40.0% | |
| ! | AGTGAACCTTTTGTGAAGAC+AGG | - | chr7_4:49352803-49352822 | Msa1159710:intron | 40.0% |
| AAAAATTGTATTTGGGGGGG+GGG | + | chr7_4:49353130-49353149 | None:intergenic | 40.0% | |
| CAAAAATTGTATTTGGGGGG+GGG | + | chr7_4:49353131-49353150 | None:intergenic | 40.0% | |
| ! | CTTTGTTTAGGAGTTTGGAG+GGG | + | chr7_4:49353175-49353194 | None:intergenic | 40.0% |
| !! | GCTTTGTTTAGGAGTTTGGA+GGG | + | chr7_4:49353176-49353195 | None:intergenic | 40.0% |
| ! | GTTCATGCCTTTTCACTGAT+TGG | + | chr7_4:49353227-49353246 | None:intergenic | 40.0% |
| ! | TTTTTGTGCCTATCACCTTC+CGG | + | chr7_4:49353373-49353392 | None:intergenic | 40.0% |
| GGCACAAAAAGGCAAAACTT+TGG | - | chr7_4:49353383-49353402 | Msa1159710:intron | 40.0% | |
| CAGTCAGCCAAACTTATCTA+TGG | + | chr7_4:49353557-49353576 | None:intergenic | 40.0% | |
| CATAGATAAGTTTGGCTGAC+TGG | - | chr7_4:49353555-49353574 | Msa1159710:CDS | 40.0% | |
| GATAAAGATCCACTCTGAAC+AGG | + | chr7_4:49353738-49353757 | None:intergenic | 40.0% | |
| ! | CATAGCCAGGAAAAGGATTT+TGG | - | chr7_4:49353792-49353811 | Msa1159710:intron | 40.0% |
| ! | TTCTCCCAAAATCCTTTTCC+TGG | + | chr7_4:49353800-49353819 | None:intergenic | 40.0% |
| !! | TTCAGATTCATTGGCTCTTG+AGG | + | chr7_4:49353838-49353857 | None:intergenic | 40.0% |
| AGTAATATGGTGCGTAAAGG+TGG | - | chr7_4:49353936-49353955 | Msa1159710:intron | 40.0% | |
| AAGTTGACGCACATAGTAGT+CGG | - | chr7_4:49353987-49354006 | Msa1159710:intron | 40.0% | |
| TCAGAAATGTGGCTTTCCTA+TGG | - | chr7_4:49354153-49354172 | Msa1159710:intron | 40.0% | |
| ATCACAATCTTCAAGCCAAG+AGG | + | chr7_4:49354301-49354320 | None:intergenic | 40.0% | |
| CATTGTACCGTTGAAGAACA+TGG | + | chr7_4:49354341-49354360 | None:intergenic | 40.0% | |
| TGGTTCAGGTCAGAAAAAGT+TGG | - | chr7_4:49354696-49354715 | Msa1159710:intron | 40.0% | |
| TTCAGGTCAGAAAAAGTTGG+TGG | - | chr7_4:49354699-49354718 | Msa1159710:intron | 40.0% | |
| ! | TTGATTATGCTGCTTCTCGT+AGG | - | chr7_4:49354803-49354822 | Msa1159710:intron | 40.0% |
| ACGACAAAAGGAAATGGAGA+TGG | - | chr7_4:49354870-49354889 | Msa1159710:intron | 40.0% | |
| AAGAATCGACGATGACTTGA+GGG | - | chr7_4:49354900-49354919 | Msa1159710:intron | 40.0% | |
| GCAAAGTTAGGTCCTCTTTA+TGG | - | chr7_4:49354922-49354941 | Msa1159710:intron | 40.0% | |
| ! | GGCTTTTGGTATCCATAAAG+AGG | + | chr7_4:49354937-49354956 | None:intergenic | 40.0% |
| ! | GGCTTATAAGCTTTATGAGG+AGG | - | chr7_4:49354978-49354997 | Msa1159710:intron | 40.0% |
| TGAGGAGGATTGTAAGTCTA+AGG | - | chr7_4:49354993-49355012 | Msa1159710:intron | 40.0% | |
| GAGGAGGATTGTAAGTCTAA+GGG | - | chr7_4:49354994-49355013 | Msa1159710:intron | 40.0% | |
| CATCTCATGATGCTTAGAGA+TGG | + | chr7_4:49355028-49355047 | None:intergenic | 40.0% | |
| CATCTCTAAGCATCATGAGA+TGG | - | chr7_4:49355026-49355045 | Msa1159710:intron | 40.0% | |
| GGGATTTAAGAAAGCAATGG+AGG | - | chr7_4:49355047-49355066 | Msa1159710:CDS | 40.0% | |
| ACATTGAGAACCACTTCAAG+GGG | - | chr7_4:49355145-49355164 | Msa1159710:intron | 40.0% | |
| TCAAAATCATCCCCTTGAAG+TGG | + | chr7_4:49355158-49355177 | None:intergenic | 40.0% | |
| ATATGGAGGCTCATCAGAAT+CGG | + | chr7_4:49355247-49355266 | None:intergenic | 40.0% | |
| ATGAGCCTCCATATTCAAAG+AGG | - | chr7_4:49355253-49355272 | Msa1159710:CDS | 40.0% | |
| TGAGCCTCCATATTCAAAGA+GGG | - | chr7_4:49355254-49355273 | Msa1159710:CDS | 40.0% | |
| TAATCAACCTGAAGAACAGG+AGG | - | chr7_4:49355290-49355309 | Msa1159710:CDS | 40.0% | |
| TAGCCTTCGCGATATCATCA+TGG | + | chr7_4:49348606-49348625 | None:intergenic | 45.0% | |
| ! | ACGGCATCGAAATCATCATG+TGG | + | chr7_4:49348632-49348651 | None:intergenic | 45.0% |
| TGATTTCGATGCCGTTCACA+AGG | - | chr7_4:49348637-49348656 | Msa1159710:CDS | 45.0% | |
| GTCTTTAAGCGCCTTGTGAA+CGG | + | chr7_4:49348651-49348670 | None:intergenic | 45.0% | |
| ! | CACAAGGCGCTTAAAGACAA+CGG | - | chr7_4:49348653-49348672 | Msa1159710:CDS | 45.0% |
| ! | AACGGTGCTGGAATTCACAT+CGG | - | chr7_4:49348671-49348690 | Msa1159710:CDS | 45.0% |
| ! | CTGTGCTATTGAGGAATCTG+AGG | - | chr7_4:49349080-49349099 | Msa1159710:CDS | 45.0% |
| GTGGACAAATTCAGGGAAGT+TGG | + | chr7_4:49349120-49349139 | None:intergenic | 45.0% | |
| CGAGTGTGTGGACAAATTCA+GGG | + | chr7_4:49349127-49349146 | None:intergenic | 45.0% | |
| CCTGAATTTGTCCACACACT+CGG | - | chr7_4:49349125-49349144 | Msa1159710:CDS | 45.0% | |
| CCTTAAAACACCTGATGGAG+TGG | + | chr7_4:49349162-49349181 | None:intergenic | 45.0% | |
| ! | CCACTCCATCAGGTGTTTTA+AGG | - | chr7_4:49349159-49349178 | Msa1159710:CDS | 45.0% |
| GATAGGTAAGTCTGTGCAAG+TGG | + | chr7_4:49349195-49349214 | None:intergenic | 45.0% | |
| CAGTCTGTGACGAAGAAGTA+AGG | + | chr7_4:49349223-49349242 | None:intergenic | 45.0% | |
| CTTACTTCTTCGTCACAGAC+TGG | - | chr7_4:49349221-49349240 | Msa1159710:intron | 45.0% | |
| GTCGTCTCAACATATGGTGA+TGG | + | chr7_4:49349257-49349276 | None:intergenic | 45.0% | |
| GTTTGGGTCGTCTCAACATA+TGG | + | chr7_4:49349263-49349282 | None:intergenic | 45.0% | |
| TATGTTGAGACGACCCAAAC+CGG | - | chr7_4:49349263-49349282 | Msa1159710:intron | 45.0% | |
| ACAAGCTCTTCTTCTCAGGT+CGG | + | chr7_4:49349325-49349344 | None:intergenic | 45.0% | |
| TTTGGTTGACTGGGTCAAAG+AGG | + | chr7_4:49349381-49349400 | None:intergenic | 45.0% | |
| ! | TCGTTTGAAGTTAACACGGC+TGG | + | chr7_4:49349445-49349464 | None:intergenic | 45.0% |
| GATTACCTAACAAACCCCTC+GGG | - | chr7_4:49349526-49349545 | Msa1159710:intron | 45.0% | |
| TGAAGACTTAGCAAGGTCCT+TGG | - | chr7_4:49349551-49349570 | Msa1159710:intron | 45.0% | |
| ATTTCCATGCTCATCCACAC+AGG | - | chr7_4:49349626-49349645 | Msa1159710:CDS | 45.0% | |
| TATACCTGTGTGGATGAGCA+TGG | + | chr7_4:49349633-49349652 | None:intergenic | 45.0% | |
| TGCTCATCCACACAGGTATA+AGG | - | chr7_4:49349633-49349652 | Msa1159710:CDS | 45.0% | |
| CTTTGCTCCTTATACCTGTG+TGG | + | chr7_4:49349643-49349662 | None:intergenic | 45.0% | |
| ! | TAATGTTGTCGGTGTCTTCG+AGG | - | chr7_4:49349710-49349729 | Msa1159710:intron | 45.0% |
| TCAGTAGCACGGACATTGTA+TGG | + | chr7_4:49349814-49349833 | None:intergenic | 45.0% | |
| ! | ATACAATGTCCGTGCTACTG+AGG | - | chr7_4:49349813-49349832 | Msa1159710:intron | 45.0% |
| ! | ACTGGACAGTTGGAGCTTTT+AGG | - | chr7_4:49349977-49349996 | Msa1159710:CDS | 45.0% |
| ! | CAGCAAGTGAAGGCTTGTTT+AGG | + | chr7_4:49350361-49350380 | None:intergenic | 45.0% |
| !! | CACTTGCTGCTTTACTATGG+AGG | - | chr7_4:49350372-49350391 | Msa1159710:intron | 45.0% |
| GCTGTCAAAATACTTGCCTC+TGG | - | chr7_4:49350394-49350413 | Msa1159710:intron | 45.0% | |
| !! | TGGCTTTGATGCGGATCAAA+AGG | - | chr7_4:49350414-49350433 | Msa1159710:intron | 45.0% |
| !! | GCTTTTTGAAGGGGTTTTGG+AGG | - | chr7_4:49350498-49350517 | Msa1159710:CDS | 45.0% |
| !!! | GAGGGCTAAGTTGGTTTTGA+AGG | - | chr7_4:49350517-49350536 | Msa1159710:CDS | 45.0% |
| TGAGAGCAAAAACAGGAACG+GGG | + | chr7_4:49350829-49350848 | None:intergenic | 45.0% | |
| TTGTATGTGACTGATCCTGC+AGG | - | chr7_4:49350862-49350881 | Msa1159710:intron | 45.0% | |
| !!! | TGTTTTGGCTCCAGAGTACA+AGG | - | chr7_4:49350970-49350989 | Msa1159710:intron | 45.0% |
| ATGTACCAGACCTTGTACTC+TGG | + | chr7_4:49350983-49351002 | None:intergenic | 45.0% | |
| !! | AAAAGCATCTAGTCCAAGGG+AGG | - | chr7_4:49351204-49351223 | Msa1159710:intron | 45.0% |
| TTGTAACCAACGGCGCATAA+AGG | + | chr7_4:49351840-49351859 | None:intergenic | 45.0% | |
| CCCAAATTGTTGGGGATTTG+TGG | - | chr7_4:49351907-49351926 | Msa1159710:intron | 45.0% | |
| ACCACATTATGTCTGGCAGT+GGG | - | chr7_4:49352133-49352152 | Msa1159710:intron | 45.0% | |
| !! | GCACTGTGTTAGGCTTTGTT+TGG | - | chr7_4:49352896-49352915 | Msa1159710:intron | 45.0% |
| !! | GGCTTTGTTTGGAAGTTTGG+AGG | - | chr7_4:49352907-49352926 | Msa1159710:intron | 45.0% |
| AAGTTTGGAGGACCAGAGAA+GGG | - | chr7_4:49352919-49352938 | Msa1159710:intron | 45.0% | |
| AAAATTGTATTTGGGGGGGG+GGG | + | chr7_4:49353129-49353148 | None:intergenic | 45.0% | |
| TGGAGGGGAGAATCTCATTT+GGG | + | chr7_4:49353160-49353179 | None:intergenic | 45.0% | |
| TTGGAGGGGAGAATCTCATT+TGG | + | chr7_4:49353161-49353180 | None:intergenic | 45.0% | |
| !! | GGCTTTGTTTAGGAGTTTGG+AGG | + | chr7_4:49353177-49353196 | None:intergenic | 45.0% |
| TCTTGACTGTTCTTACGCTC+CGG | - | chr7_4:49353351-49353370 | Msa1159710:intron | 45.0% | |
| GGAAGGTGATAGGCACAAAA+AGG | - | chr7_4:49353372-49353391 | Msa1159710:intron | 45.0% | |
| ATCAACAGTGCAACATAGCC+AGG | - | chr7_4:49353779-49353798 | Msa1159710:intron | 45.0% | |
| AGTGCAACATAGCCAGGAAA+AGG | - | chr7_4:49353785-49353804 | Msa1159710:intron | 45.0% | |
| GCCAATGAATCTGAATCCGA+TGG | - | chr7_4:49353843-49353862 | Msa1159710:intron | 45.0% | |
| GCCATCGGATTCAGATTCAT+TGG | + | chr7_4:49353847-49353866 | None:intergenic | 45.0% | |
| CTGAATCCGATGGCAATGAT+CGG | - | chr7_4:49353853-49353872 | Msa1159710:intron | 45.0% | |
| AATATGGTGCGTAAAGGTGG+AGG | - | chr7_4:49353939-49353958 | Msa1159710:intron | 45.0% | |
| AGTTGACGCACATAGTAGTC+GGG | - | chr7_4:49353988-49354007 | Msa1159710:intron | 45.0% | |
| !! | TTTTAGGAGTTTGGAGGGGA+AGG | - | chr7_4:49354533-49354552 | Msa1159710:intron | 45.0% |
| TTTAGGAGTTTGGAGGGGAA+GGG | - | chr7_4:49354534-49354553 | Msa1159710:intron | 45.0% | |
| !! | AGGTCAGAAAAAGTTGGTGG+AGG | - | chr7_4:49354702-49354721 | Msa1159710:intron | 45.0% |
| !! | TGTTGACTTAGCTCAAGTGC+TGG | - | chr7_4:49354780-49354799 | Msa1159710:intron | 45.0% |
| CAAGAATCGACGATGACTTG+AGG | - | chr7_4:49354899-49354918 | Msa1159710:intron | 45.0% | |
| GATGACTTGAGGGCAAAGTT+AGG | - | chr7_4:49354910-49354929 | Msa1159710:intron | 45.0% | |
| !! | AAGAAAGCAATGGAGGCGTT+TGG | - | chr7_4:49355054-49355073 | Msa1159710:CDS | 45.0% |
| CATGCCCTCTTTGAATATGG+AGG | + | chr7_4:49355261-49355280 | None:intergenic | 45.0% | |
| CTCCATATTCAAAGAGGGCA+TGG | - | chr7_4:49355259-49355278 | Msa1159710:CDS | 45.0% | |
| CTCCATGCCCTCTTTGAATA+TGG | + | chr7_4:49355264-49355283 | None:intergenic | 45.0% | |
| ! | TATTCAAAGAGGGCATGGAG+TGG | - | chr7_4:49355264-49355283 | Msa1159710:CDS | 45.0% |
| ! | GAATCTGAGGTGCTCAACTG+AGG | - | chr7_4:49349093-49349112 | Msa1159710:CDS | 50.0% |
| CCGAGTGTGTGGACAAATTC+AGG | + | chr7_4:49349128-49349147 | None:intergenic | 50.0% | |
| AAAGTGAGCACCACTCCATC+AGG | - | chr7_4:49349149-49349168 | Msa1159710:CDS | 50.0% | |
| TAAGTCTGTGCAAGTGGAGG+AGG | + | chr7_4:49349189-49349208 | None:intergenic | 50.0% | |
| AGGTAAGTCTGTGCAAGTGG+AGG | + | chr7_4:49349192-49349211 | None:intergenic | 50.0% | |
| GGCTACAAGCTCTTCTTCTC+AGG | + | chr7_4:49349329-49349348 | None:intergenic | 50.0% | |
| GTTGACTGGGTCAAAGAGGA+AGG | + | chr7_4:49349377-49349396 | None:intergenic | 50.0% | |
| AGCCTGGAGTTTGGTTGACT+GGG | + | chr7_4:49349390-49349409 | None:intergenic | 50.0% | |
| AAGCCTGGAGTTTGGTTGAC+TGG | + | chr7_4:49349391-49349410 | None:intergenic | 50.0% | |
| TGCTAAGTCTTCAGACCCGA+GGG | + | chr7_4:49349544-49349563 | None:intergenic | 50.0% | |
| TTGCTAAGTCTTCAGACCCG+AGG | + | chr7_4:49349545-49349564 | None:intergenic | 50.0% | |
| TCGGGTCTGAAGACTTAGCA+AGG | - | chr7_4:49349544-49349563 | Msa1159710:intron | 50.0% | |
| ! | AATGTCCGTGCTACTGAGGT+TGG | - | chr7_4:49349817-49349836 | Msa1159710:intron | 50.0% |
| ! | GTGAAGGCTTGTTTAGGCAG+AGG | + | chr7_4:49350355-49350374 | None:intergenic | 50.0% |
| !! | ACTTGCCTCTGGCTTTGATG+CGG | - | chr7_4:49350405-49350424 | Msa1159710:intron | 50.0% |
| TTGATCCGCATCAAAGCCAG+AGG | + | chr7_4:49350413-49350432 | None:intergenic | 50.0% | |
| ! | GCGACACGTCGTAAGAGTAT+TGG | + | chr7_4:49350473-49350492 | None:intergenic | 50.0% |
| !!! | TCAAAGGGTTTTGGAGGGTC+AGG | + | chr7_4:49350665-49350684 | None:intergenic | 50.0% |
| ! | CTAAGGGTGTGTTTGCGAGT+AGG | + | chr7_4:49350691-49350710 | None:intergenic | 50.0% |
| CTACTCGCAAACACACCCTT+AGG | - | chr7_4:49350689-49350708 | Msa1159710:intron | 50.0% | |
| GAGAGCAAAAACAGGAACGG+GGG | + | chr7_4:49350828-49350847 | None:intergenic | 50.0% | |
| GAAGGAAAGACCAACTAGCC+AGG | + | chr7_4:49351045-49351064 | None:intergenic | 50.0% | |
| AGTCCAAGGGAGGAAGATTC+TGG | - | chr7_4:49351214-49351233 | Msa1159710:intron | 50.0% | |
| TGACCAGAATCTTCCTCCCT+TGG | + | chr7_4:49351220-49351239 | None:intergenic | 50.0% | |
| CACCACATTATGTCTGGCAG+TGG | - | chr7_4:49352132-49352151 | Msa1159710:intron | 50.0% | |
| TGTATGACTGGAATCCGAGC+AGG | - | chr7_4:49352275-49352294 | Msa1159710:intron | 50.0% | |
| AACACAGTGCAGTAGAGGAC+AGG | + | chr7_4:49352886-49352905 | None:intergenic | 50.0% | |
| GTCCTCTACTGCACTGTGTT+AGG | - | chr7_4:49352886-49352905 | Msa1159710:intron | 50.0% | |
| AGCCTAACACAGTGCAGTAG+AGG | + | chr7_4:49352891-49352910 | None:intergenic | 50.0% | |
| GAAGTTTGGAGGACCAGAGA+AGG | - | chr7_4:49352918-49352937 | Msa1159710:intron | 50.0% | |
| AAATTGTATTTGGGGGGGGG+GGG | + | chr7_4:49353128-49353147 | None:intergenic | 50.0% | |
| GAGGGGAGAATCTCATTTGG+GGG | + | chr7_4:49353158-49353177 | None:intergenic | 50.0% | |
| GGAGGGGAGAATCTCATTTG+GGG | + | chr7_4:49353159-49353178 | None:intergenic | 50.0% | |
| AGATCCACTCTGAACAGGGT+AGG | + | chr7_4:49353733-49353752 | None:intergenic | 50.0% | |
| GTAGCGAGAACTGTTGCTAG+AGG | - | chr7_4:49354255-49354274 | Msa1159710:intron | 50.0% | |
| !! | AGTTGGTGGAGGCATCTGAT+AGG | - | chr7_4:49354713-49354732 | Msa1159710:intron | 50.0% |
| TTGAGCACCTCCTGTTCTTC+AGG | + | chr7_4:49355300-49355319 | None:intergenic | 50.0% | |
| GCGCTTAAAGACAACGGTGC+TGG | - | chr7_4:49348659-49348678 | Msa1159710:CDS | 55.0% | |
| TGCTCACTTTGCCGAGTGTG+TGG | + | chr7_4:49349139-49349158 | None:intergenic | 55.0% | |
| ! | ACCCAAACCGGTCGAGTTGT+GGG | - | chr7_4:49349275-49349294 | Msa1159710:intron | 55.0% |
| TCTCAACGCGCTCTTGGCTA+GGG | + | chr7_4:49349350-49349369 | None:intergenic | 55.0% | |
| GACCCAGTCAACCAAACTCC+AGG | - | chr7_4:49349385-49349404 | Msa1159710:intron | 55.0% | |
| ! | TCAGACCCGAGGGGTTTGTT+AGG | + | chr7_4:49349534-49349553 | None:intergenic | 55.0% |
| GCTAAGTCTTCAGACCCGAG+GGG | + | chr7_4:49349543-49349562 | None:intergenic | 55.0% | |
| GGAGGGAAACCCATTTACCG+AGG | + | chr7_4:49349592-49349611 | None:intergenic | 55.0% | |
| CCACACCAACCTCAGTAGCA+CGG | + | chr7_4:49349825-49349844 | None:intergenic | 55.0% | |
| !!! | GGGGTTTTGGAGGGCTAAGT+TGG | - | chr7_4:49350508-49350527 | Msa1159710:CDS | 55.0% |
| AAACAGGAACGGGGGAGTGA+AGG | + | chr7_4:49350820-49350839 | None:intergenic | 55.0% | |
| TGGCTCCAGAGTACAAGGTC+TGG | - | chr7_4:49350975-49350994 | Msa1159710:intron | 55.0% | |
| GCCCACTGCCAGACATAATG+TGG | + | chr7_4:49352137-49352156 | None:intergenic | 55.0% | |
| TTTGGAGGACCAGAGAAGGG+AGG | - | chr7_4:49352922-49352941 | Msa1159710:intron | 55.0% | |
| AATTGTATTTGGGGGGGGGG+GGG | + | chr7_4:49353127-49353146 | None:intergenic | 55.0% | |
| GACTGTTCTTACGCTCCGGA+AGG | - | chr7_4:49353355-49353374 | Msa1159710:intron | 55.0% | |
| CTTACGCTCCGGAAGGTGAT+AGG | - | chr7_4:49353362-49353381 | Msa1159710:intron | 55.0% | |
| GAGTCCTACCCTGTTCAGAG+TGG | - | chr7_4:49353726-49353745 | Msa1159710:intron | 55.0% | |
| GCGCGTTTGCTTCGAGATTG+CGG | - | chr7_4:49354837-49354856 | Msa1159710:intron | 55.0% | |
| ! | GACCCAAACCGGTCGAGTTG+TGG | - | chr7_4:49349274-49349293 | Msa1159710:intron | 60.0% |
| ! | GCCCACAACTCGACCGGTTT+GGG | + | chr7_4:49349279-49349298 | None:intergenic | 60.0% |
| TCTCCTGCTGCTACAGCCGT+TGG | + | chr7_4:49349301-49349320 | None:intergenic | 60.0% | |
| GTCTCAACGCGCTCTTGGCT+AGG | + | chr7_4:49349351-49349370 | None:intergenic | 60.0% | |
| GGACAGTCTCAACGCGCTCT+TGG | + | chr7_4:49349356-49349375 | None:intergenic | 60.0% | |
| !! | CCGTGCTACTGAGGTTGGTG+TGG | - | chr7_4:49349822-49349841 | Msa1159710:intron | 60.0% |
| CAGCCGACAGTGAAGCTGTG+GGG | + | chr7_4:49352582-49352601 | None:intergenic | 60.0% | |
| GCAGCCGACAGTGAAGCTGT+GGG | + | chr7_4:49352583-49352602 | None:intergenic | 60.0% | |
| TGCAGCCGACAGTGAAGCTG+TGG | + | chr7_4:49352584-49352603 | None:intergenic | 60.0% | |
| ATTGTATTTGGGGGGGGGGG+GGG | + | chr7_4:49353126-49353145 | None:intergenic | 60.0% | |
| AGGAGTTTGGAGGGGAAGGG+AGG | - | chr7_4:49354537-49354556 | Msa1159710:intron | 60.0% | |
| GGAGTTTGGAGGGGAAGGGA+GGG | - | chr7_4:49354538-49354557 | Msa1159710:intron | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | - | chr7_4:49354539-49354558 | Msa1159710:intron | 60.0% | |
| !! | AAGGGAGGGGAGGGTTTTGG+AGG | - | chr7_4:49354552-49354571 | Msa1159710:intron | 60.0% |
| !!! | AGGGAGGGGAGGGTTTTGGA+GGG | - | chr7_4:49354553-49354572 | Msa1159710:intron | 60.0% |
| GGCCCACAACTCGACCGGTT+TGG | + | chr7_4:49349280-49349299 | None:intergenic | 65.0% | |
| CCGTTGGCCCACAACTCGAC+CGG | + | chr7_4:49349285-49349304 | None:intergenic | 65.0% | |
| ! | CCGGTCGAGTTGTGGGCCAA+CGG | - | chr7_4:49349282-49349301 | Msa1159710:intron | 65.0% |
| GGAGGACCAGAGAAGGGAGG+CGG | - | chr7_4:49352925-49352944 | Msa1159710:intron | 65.0% | |
| GAGGACCAGAGAAGGGAGGC+GGG | - | chr7_4:49352926-49352945 | Msa1159710:intron | 65.0% | |
| ACCAGAGAAGGGAGGCGGGT+GGG | - | chr7_4:49352930-49352949 | Msa1159710:intron | 65.0% | |
| TTGTATTTGGGGGGGGGGGG+GGG | + | chr7_4:49353125-49353144 | None:intergenic | 65.0% | |
| TTTGGAGGGGAAGGGAGGGG+AGG | - | chr7_4:49354542-49354561 | Msa1159710:intron | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+GGG | - | chr7_4:49354543-49354562 | Msa1159710:intron | 65.0% | |
| ! | GGGAAGGGAGGGGAGGGTTT+TGG | - | chr7_4:49354549-49354568 | Msa1159710:intron | 65.0% |
| GGGCCAACGGCTGTAGCAGC+AGG | - | chr7_4:49349295-49349314 | Msa1159710:intron | 70.0% | |
| GACCAGAGAAGGGAGGCGGG+TGG | - | chr7_4:49352929-49352948 | Msa1159710:intron | 70.0% | |
| TCCCACCCGCCTCCCTTCTC+TGG | + | chr7_4:49352934-49352953 | None:intergenic | 70.0% | |
| TGTATTTGGGGGGGGGGGGG+GGG | + | chr7_4:49353124-49353143 | None:intergenic | 70.0% | |
| !! | GGGGGGGGGGGTTGGTTGGA+GGG | + | chr7_4:49353102-49353121 | None:intergenic | 75.0% |
| TATTTGGGGGGGGGGGGGGG+GGG | + | chr7_4:49353122-49353141 | None:intergenic | 75.0% | |
| GTATTTGGGGGGGGGGGGGG+GGG | + | chr7_4:49353123-49353142 | None:intergenic | 75.0% | |
| !!! | GGGGGGGGGGGGTTGGTTGG+AGG | + | chr7_4:49353103-49353122 | None:intergenic | 80.0% |
| ! | ATTTGGGGGGGGGGGGGGGG+GGG | + | chr7_4:49353121-49353140 | None:intergenic | 80.0% |
| !! | GGGGGGGGGGGGGGGTTGGT+TGG | + | chr7_4:49353106-49353125 | None:intergenic | 85.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | + | chr7_4:49353120-49353139 | None:intergenic | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr7_4:49353119-49353138 | None:intergenic | 90.0% |
| ! | GGGGGGGGGGGGGGGGGGGT+TGG | + | chr7_4:49353110-49353129 | None:intergenic | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_4:49353118-49353137 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 49348578 | 49355353 | 49348578 | ID=Msa1159710;Name=Msa1159710 |
| chr7_4 | mRNA | 49348578 | 49355353 | 49348578 | ID=Msa1159710-mRNA-1;Parent=Msa1159710;Name=Msa1159710-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.37|0.33|1|1|1|9|0|559 |
| chr7_4 | exon | 49355180 | 49355353 | 49355180 | ID=Msa1159710-mRNA-1:exon:13579;Parent=Msa1159710-mRNA-1 |
| chr7_4 | exon | 49355037 | 49355079 | 49355037 | ID=Msa1159710-mRNA-1:exon:13578;Parent=Msa1159710-mRNA-1 |
| chr7_4 | exon | 49353535 | 49353617 | 49353535 | ID=Msa1159710-mRNA-1:exon:13577;Parent=Msa1159710-mRNA-1 |
| chr7_4 | exon | 49352940 | 49353047 | 49352940 | ID=Msa1159710-mRNA-1:exon:13576;Parent=Msa1159710-mRNA-1 |
| chr7_4 | exon | 49351635 | 49351779 | 49351635 | ID=Msa1159710-mRNA-1:exon:13575;Parent=Msa1159710-mRNA-1 |
| chr7_4 | exon | 49350471 | 49350554 | 49350471 | ID=Msa1159710-mRNA-1:exon:13574;Parent=Msa1159710-mRNA-1 |
| chr7_4 | exon | 49349907 | 49350219 | 49349907 | ID=Msa1159710-mRNA-1:exon:13573;Parent=Msa1159710-mRNA-1 |
| chr7_4 | exon | 49349579 | 49349689 | 49349579 | ID=Msa1159710-mRNA-1:exon:13572;Parent=Msa1159710-mRNA-1 |
| chr7_4 | exon | 49348578 | 49349196 | 49348578 | ID=Msa1159710-mRNA-1:exon:13571;Parent=Msa1159710-mRNA-1 |
| chr7_4 | CDS | 49355180 | 49355353 | 49355180 | ID=Msa1159710-mRNA-1:cds;Parent=Msa1159710-mRNA-1 |
| chr7_4 | CDS | 49355037 | 49355079 | 49355037 | ID=Msa1159710-mRNA-1:cds;Parent=Msa1159710-mRNA-1 |
| chr7_4 | CDS | 49353535 | 49353617 | 49353535 | ID=Msa1159710-mRNA-1:cds;Parent=Msa1159710-mRNA-1 |
| chr7_4 | CDS | 49352940 | 49353047 | 49352940 | ID=Msa1159710-mRNA-1:cds;Parent=Msa1159710-mRNA-1 |
| chr7_4 | CDS | 49351635 | 49351779 | 49351635 | ID=Msa1159710-mRNA-1:cds;Parent=Msa1159710-mRNA-1 |
| chr7_4 | CDS | 49350471 | 49350554 | 49350471 | ID=Msa1159710-mRNA-1:cds;Parent=Msa1159710-mRNA-1 |
| chr7_4 | CDS | 49349907 | 49350219 | 49349907 | ID=Msa1159710-mRNA-1:cds;Parent=Msa1159710-mRNA-1 |
| chr7_4 | CDS | 49349579 | 49349689 | 49349579 | ID=Msa1159710-mRNA-1:cds;Parent=Msa1159710-mRNA-1 |
| chr7_4 | CDS | 49348578 | 49349196 | 49348578 | ID=Msa1159710-mRNA-1:cds;Parent=Msa1159710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
