Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508540 | XP_003600838.1 | 91.743 | 436 | 12 | 2 | 1 | 412 | 1 | 436 | 0.0 | 793 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508540 | sp|P92961|PROT1_ARATH | 67.981 | 431 | 112 | 3 | 6 | 412 | 14 | 442 | 0.0 | 603 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508540 | G7JAM5 | 91.743 | 436 | 12 | 2 | 1 | 412 | 1 | 436 | 0.0 | 793 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012260 | Msa0508540 | 0.801047 | 1.082370e-48 | -8.615850e-47 |
| Msa0060970 | Msa0508540 | 0.816968 | 4.205906e-52 | -8.615850e-47 |
| Msa0108850 | Msa0508540 | 0.802829 | 4.658119e-49 | -8.615850e-47 |
| Msa0223100 | Msa0508540 | 0.834778 | 2.462122e-56 | -8.615850e-47 |
| Msa0223290 | Msa0508540 | 0.822102 | 2.835127e-53 | -8.615850e-47 |
| Msa0226290 | Msa0508540 | 0.803400 | 3.550065e-49 | -8.615850e-47 |
| Msa0233610 | Msa0508540 | 0.800751 | 1.244021e-48 | -8.615850e-47 |
| Msa0370310 | Msa0508540 | 0.830221 | 3.317991e-55 | -8.615850e-47 |
| Msa0370870 | Msa0508540 | 0.861339 | 1.099921e-63 | -8.615850e-47 |
| Msa0379060 | Msa0508540 | 0.818764 | 1.653448e-52 | -8.615850e-47 |
| Msa0416320 | Msa0508540 | 0.818171 | 2.252961e-52 | -8.615850e-47 |
| Msa0419050 | Msa0508540 | 0.809720 | 1.646146e-50 | -8.615850e-47 |
| Msa0426810 | Msa0508540 | 0.814147 | 1.786468e-51 | -8.615850e-47 |
| Msa0464900 | Msa0508540 | 0.813105 | 3.028316e-51 | -8.615850e-47 |
| Msa0287670 | Msa0508540 | 0.806153 | 9.445408e-50 | -8.615850e-47 |
| Msa0288320 | Msa0508540 | 0.811768 | 5.935291e-51 | -8.615850e-47 |
| Msa0302650 | Msa0508540 | 0.806473 | 8.087749e-50 | -8.615850e-47 |
| Msa0310490 | Msa0508540 | 0.835462 | 1.654586e-56 | -8.615850e-47 |
| Msa0312310 | Msa0508540 | 0.856651 | 2.785164e-62 | -8.615850e-47 |
| Msa0362060 | Msa0508540 | 0.910266 | 2.269664e-82 | -8.615850e-47 |
| Msa0363100 | Msa0508540 | 0.812788 | 3.554760e-51 | -8.615850e-47 |
| Msa0508540 | Msa0510560 | 0.812403 | 4.315623e-51 | -8.615850e-47 |
| Msa0508540 | Msa0579340 | 0.822295 | 2.557559e-53 | -8.615850e-47 |
| Msa0508540 | Msa0598560 | 0.825167 | 5.434581e-54 | -8.615850e-47 |
| Msa0508540 | Msa0622340 | 0.807469 | 4.977827e-50 | -8.615850e-47 |
| Msa0508540 | Msa0650650 | 0.814115 | 1.815725e-51 | -8.615850e-47 |
| Msa0508540 | Msa0650740 | 0.824858 | 6.427499e-54 | -8.615850e-47 |
| Msa0508540 | Msa0908170 | 0.802856 | 4.599829e-49 | -8.615850e-47 |
| Msa0508540 | Msa0944730 | 0.825205 | 5.321865e-54 | -8.615850e-47 |
| Msa0508540 | Msa1160580 | 0.800566 | 1.357006e-48 | -8.615850e-47 |
| Msa0508540 | Msa1182640 | 0.804008 | 2.654188e-49 | -8.615850e-47 |
| Msa0508540 | Msa1218650 | 0.811196 | 7.900633e-51 | -8.615850e-47 |
| Msa0508540 | Msa1229850 | 0.815127 | 1.084051e-51 | -8.615850e-47 |
| Msa0508540 | Msa1236070 | -0.809948 | 1.470100e-50 | -8.615850e-47 |
| Msa0508540 | Msa1272520 | 0.843036 | 1.793432e-58 | -8.615850e-47 |
| Msa0508540 | Msa1310660 | 0.825340 | 4.945271e-54 | -8.615850e-47 |
| Msa0508540 | Msa1350690 | 0.805271 | 1.446709e-49 | -8.615850e-47 |
| Msa0508540 | Msa1360280 | 0.804977 | 1.666741e-49 | -8.615850e-47 |
| Msa0508540 | Msa1375700 | -0.808528 | 2.963389e-50 | -8.615850e-47 |
| Msa0508540 | Msa1383480 | 0.815268 | 1.008584e-51 | -8.615850e-47 |
| Msa0508540 | Msa1415820 | 0.802817 | 4.686099e-49 | -8.615850e-47 |
| Msa0508540 | Msa1419110 | 0.803298 | 3.726696e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508540 | MtrunA17_Chr3g0112971 | 91.743 | 436 | 12 | 2 | 1 | 412 | 1 | 436 | 0.0 | 793 |
| Msa0508540 | MtrunA17_Chr5g0436281 | 73.107 | 383 | 79 | 3 | 54 | 412 | 1 | 383 | 0.0 | 569 |
| Msa0508540 | MtrunA17_Chr4g0058161 | 38.532 | 436 | 242 | 5 | 1 | 412 | 17 | 450 | 5.88e-102 | 310 |
| Msa0508540 | MtrunA17_Chr1g0184721 | 31.392 | 395 | 230 | 8 | 54 | 412 | 51 | 440 | 9.58e-42 | 152 |
| Msa0508540 | MtrunA17_Chr1g0198081 | 29.493 | 434 | 247 | 14 | 25 | 411 | 59 | 480 | 3.77e-36 | 138 |
| Msa0508540 | MtrunA17_Chr4g0027241 | 28.868 | 433 | 251 | 13 | 26 | 412 | 41 | 462 | 3.30e-34 | 132 |
| Msa0508540 | MtrunA17_Chr8g0387941 | 27.294 | 436 | 249 | 13 | 26 | 409 | 28 | 447 | 4.44e-33 | 129 |
| Msa0508540 | MtrunA17_Chr6g0458931 | 25.597 | 461 | 273 | 16 | 5 | 410 | 10 | 455 | 3.47e-22 | 98.2 |
| Msa0508540 | MtrunA17_Chr3g0130641 | 25.108 | 462 | 281 | 14 | 7 | 411 | 22 | 475 | 3.85e-22 | 98.2 |
| Msa0508540 | MtrunA17_Chr6g0459011 | 27.949 | 390 | 234 | 13 | 54 | 405 | 13 | 393 | 4.77e-21 | 94.4 |
| Msa0508540 | MtrunA17_Chr5g0422741 | 27.157 | 394 | 240 | 9 | 54 | 409 | 54 | 438 | 1.91e-20 | 92.8 |
| Msa0508540 | MtrunA17_Chr8g0384661 | 25.821 | 457 | 271 | 15 | 12 | 409 | 43 | 490 | 2.39e-20 | 92.8 |
| Msa0508540 | MtrunA17_Chr3g0130651 | 26.265 | 415 | 240 | 14 | 9 | 366 | 16 | 421 | 2.55e-19 | 89.7 |
| Msa0508540 | MtrunA17_Chr1g0198531 | 26.142 | 394 | 244 | 9 | 54 | 409 | 52 | 436 | 3.91e-19 | 89.0 |
| Msa0508540 | MtrunA17_Chr2g0331721 | 24.490 | 441 | 271 | 13 | 20 | 409 | 31 | 460 | 3.96e-19 | 89.0 |
| Msa0508540 | MtrunA17_Chr6g0459021 | 26.949 | 449 | 271 | 16 | 2 | 410 | 16 | 447 | 8.64e-19 | 88.2 |
| Msa0508540 | MtrunA17_Chr3g0140761 | 24.411 | 467 | 284 | 16 | 8 | 409 | 16 | 478 | 1.02e-18 | 87.8 |
| Msa0508540 | MtrunA17_Chr1g0159761 | 26.014 | 419 | 242 | 14 | 9 | 366 | 17 | 428 | 2.43e-18 | 86.7 |
| Msa0508540 | MtrunA17_Chr1g0198541 | 26.329 | 395 | 242 | 11 | 54 | 409 | 52 | 436 | 2.67e-18 | 86.7 |
| Msa0508540 | MtrunA17_Chr4g0037201 | 25.053 | 475 | 273 | 16 | 7 | 409 | 45 | 508 | 3.00e-18 | 86.7 |
| Msa0508540 | MtrunA17_Chr4g0057851 | 25.373 | 402 | 264 | 11 | 39 | 408 | 24 | 421 | 4.35e-18 | 85.9 |
| Msa0508540 | MtrunA17_Chr1g0206871 | 24.946 | 461 | 262 | 16 | 27 | 411 | 17 | 469 | 7.96e-18 | 85.1 |
| Msa0508540 | MtrunA17_Chr3g0125091 | 24.622 | 463 | 277 | 13 | 9 | 409 | 24 | 476 | 8.18e-18 | 85.1 |
| Msa0508540 | MtrunA17_Chr3g0077651 | 23.940 | 401 | 244 | 12 | 57 | 410 | 83 | 469 | 6.88e-17 | 82.4 |
| Msa0508540 | MtrunA17_Chr6g0458921 | 27.062 | 388 | 251 | 10 | 54 | 410 | 42 | 428 | 9.70e-17 | 81.6 |
| Msa0508540 | MtrunA17_Chr3g0125081 | 24.946 | 465 | 278 | 13 | 9 | 412 | 24 | 478 | 1.28e-16 | 81.6 |
| Msa0508540 | MtrunA17_Chr2g0328081 | 26.031 | 388 | 255 | 9 | 54 | 410 | 42 | 428 | 2.23e-16 | 80.5 |
| Msa0508540 | MtrunA17_Chr1g0146491 | 24.204 | 471 | 280 | 18 | 8 | 409 | 6 | 468 | 2.32e-16 | 80.9 |
| Msa0508540 | MtrunA17_Chr8g0376991 | 24.372 | 398 | 248 | 15 | 54 | 410 | 51 | 436 | 2.75e-16 | 80.5 |
| Msa0508540 | MtrunA17_Chr3g0125101 | 25.355 | 422 | 242 | 13 | 57 | 412 | 65 | 479 | 2.81e-16 | 80.5 |
| Msa0508540 | MtrunA17_Chr4g0027261 | 30.500 | 200 | 113 | 6 | 226 | 412 | 1 | 187 | 1.09e-15 | 75.1 |
| Msa0508540 | MtrunA17_Chr3g0122921 | 24.554 | 448 | 261 | 16 | 12 | 410 | 9 | 428 | 1.34e-15 | 78.2 |
| Msa0508540 | MtrunA17_Chr6g0459031 | 26.735 | 389 | 251 | 11 | 54 | 410 | 42 | 428 | 2.25e-15 | 77.4 |
| Msa0508540 | MtrunA17_Chr7g0230011 | 27.228 | 404 | 229 | 14 | 54 | 410 | 58 | 443 | 4.98e-15 | 76.6 |
| Msa0508540 | MtrunA17_Chr5g0430221 | 62.963 | 54 | 16 | 1 | 134 | 187 | 1 | 50 | 2.18e-14 | 70.5 |
| Msa0508540 | MtrunA17_Chr3g0143701 | 24.654 | 361 | 221 | 12 | 57 | 371 | 115 | 470 | 4.93e-14 | 73.6 |
| Msa0508540 | MtrunA17_Chr1g0146391 | 22.302 | 417 | 262 | 11 | 54 | 410 | 40 | 454 | 8.37e-14 | 72.8 |
| Msa0508540 | MtrunA17_Chr4g0038711 | 25.000 | 400 | 234 | 17 | 57 | 400 | 101 | 490 | 1.26e-13 | 72.4 |
| Msa0508540 | MtrunA17_Chr6g0459001 | 26.230 | 427 | 245 | 13 | 54 | 410 | 50 | 476 | 6.42e-13 | 70.1 |
| Msa0508540 | MtrunA17_Chr1g0146411 | 23.504 | 468 | 288 | 16 | 3 | 409 | 11 | 469 | 9.04e-13 | 69.7 |
| Msa0508540 | MtrunA17_Chr1g0206831 | 28.629 | 248 | 143 | 8 | 185 | 408 | 102 | 339 | 9.93e-13 | 68.9 |
| Msa0508540 | MtrunA17_Chr2g0293331 | 22.857 | 420 | 250 | 13 | 57 | 410 | 43 | 454 | 7.57e-12 | 66.6 |
| Msa0508540 | MtrunA17_Chr3g0103231 | 25.266 | 376 | 207 | 15 | 57 | 366 | 54 | 421 | 3.62e-11 | 64.7 |
| Msa0508540 | MtrunA17_Chr5g0447221 | 22.381 | 420 | 259 | 14 | 37 | 396 | 41 | 453 | 4.88e-11 | 64.3 |
| Msa0508540 | MtrunA17_Chr3g0103211 | 22.911 | 371 | 222 | 14 | 57 | 366 | 54 | 421 | 8.29e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508540 | AT2G39890.2 | 67.981 | 431 | 112 | 3 | 6 | 412 | 14 | 442 | 0.0 | 603 |
| Msa0508540 | AT2G39890.1 | 67.981 | 431 | 112 | 3 | 6 | 412 | 14 | 442 | 0.0 | 603 |
| Msa0508540 | AT3G55740.1 | 68.171 | 421 | 110 | 2 | 16 | 412 | 19 | 439 | 0.0 | 593 |
| Msa0508540 | AT2G36590.1 | 65.278 | 432 | 122 | 3 | 9 | 412 | 5 | 436 | 0.0 | 573 |
| Msa0508540 | AT2G39890.3 | 67.363 | 383 | 101 | 2 | 54 | 412 | 1 | 383 | 0.0 | 533 |
| Msa0508540 | AT3G55740.2 | 66.841 | 383 | 103 | 2 | 54 | 412 | 1 | 383 | 0.0 | 523 |
| Msa0508540 | AT3G55740.3 | 66.841 | 383 | 103 | 2 | 54 | 412 | 1 | 383 | 0.0 | 523 |
| Msa0508540 | AT2G36590.2 | 63.810 | 315 | 86 | 3 | 9 | 295 | 5 | 319 | 1.75e-144 | 414 |
| Msa0508540 | AT1G08230.2 | 27.948 | 458 | 274 | 13 | 2 | 412 | 3 | 451 | 1.23e-35 | 136 |
| Msa0508540 | AT1G08230.4 | 32.636 | 239 | 138 | 6 | 190 | 412 | 101 | 332 | 9.00e-29 | 115 |
| Msa0508540 | AT1G08230.6 | 32.636 | 239 | 138 | 6 | 190 | 412 | 101 | 332 | 9.00e-29 | 115 |
| Msa0508540 | AT1G08230.5 | 32.636 | 239 | 138 | 6 | 190 | 412 | 101 | 332 | 9.00e-29 | 115 |
| Msa0508540 | AT1G08230.3 | 32.636 | 239 | 138 | 6 | 190 | 412 | 120 | 351 | 1.18e-28 | 115 |
| Msa0508540 | AT5G41800.1 | 25.968 | 439 | 255 | 14 | 26 | 411 | 27 | 448 | 3.62e-28 | 115 |
| Msa0508540 | AT5G09220.1 | 26.087 | 414 | 245 | 11 | 57 | 409 | 76 | 489 | 4.13e-22 | 98.6 |
| Msa0508540 | AT5G63850.1 | 23.881 | 469 | 272 | 15 | 7 | 409 | 13 | 462 | 5.01e-21 | 95.1 |
| Msa0508540 | AT1G24400.1 | 25.381 | 394 | 249 | 10 | 54 | 410 | 56 | 441 | 6.53e-20 | 91.7 |
| Msa0508540 | AT5G40780.1 | 23.956 | 455 | 280 | 13 | 8 | 410 | 6 | 446 | 1.37e-19 | 90.9 |
| Msa0508540 | AT5G40780.3 | 25.628 | 398 | 243 | 11 | 54 | 410 | 13 | 398 | 3.33e-19 | 89.4 |
| Msa0508540 | AT5G40780.2 | 25.628 | 398 | 243 | 11 | 54 | 410 | 13 | 398 | 3.33e-19 | 89.4 |
| Msa0508540 | AT1G48640.1 | 24.459 | 462 | 284 | 15 | 1 | 410 | 5 | 453 | 3.84e-18 | 86.7 |
| Msa0508540 | AT1G44100.1 | 26.681 | 476 | 257 | 23 | 9 | 409 | 18 | 476 | 7.09e-18 | 85.9 |
| Msa0508540 | AT1G77380.1 | 25.445 | 393 | 223 | 15 | 57 | 386 | 60 | 445 | 8.96e-17 | 82.4 |
| Msa0508540 | AT1G25530.1 | 25.980 | 408 | 229 | 14 | 54 | 410 | 55 | 440 | 6.42e-16 | 79.7 |
| Msa0508540 | AT1G67640.1 | 24.297 | 391 | 257 | 10 | 54 | 410 | 56 | 441 | 6.62e-16 | 79.7 |
| Msa0508540 | AT1G71680.1 | 25.442 | 452 | 281 | 15 | 2 | 410 | 10 | 448 | 2.88e-15 | 77.8 |
| Msa0508540 | AT1G58360.1 | 23.467 | 473 | 284 | 14 | 6 | 409 | 17 | 480 | 5.54e-15 | 77.0 |
| Msa0508540 | AT5G49630.1 | 24.362 | 431 | 242 | 15 | 6 | 366 | 19 | 435 | 5.10e-14 | 73.9 |
| Msa0508540 | AT1G61270.1 | 25.057 | 435 | 268 | 15 | 7 | 396 | 13 | 434 | 1.96e-13 | 72.0 |
| Msa0508540 | AT1G10010.2 | 26.207 | 435 | 239 | 18 | 4 | 370 | 14 | 434 | 6.20e-13 | 70.9 |
| Msa0508540 | AT1G10010.1 | 26.207 | 435 | 239 | 18 | 4 | 370 | 13 | 433 | 7.01e-13 | 70.5 |
| Msa0508540 | AT3G01760.1 | 24.719 | 445 | 274 | 16 | 6 | 399 | 3 | 437 | 2.49e-11 | 65.5 |
Find 129 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAATTGTTGTGAATATTT+TGG | 0.158270 | 3_4:-56650243 | None:intergenic |
| CTAATTTGATGAGCAGTTTC+TGG | 0.188300 | 3_4:-56647431 | None:intergenic |
| AAATACTGGTTACATCATTT+TGG | 0.194408 | 3_4:+56649147 | Msa0508540:CDS |
| TGGTTACCTTTGCAGGATAC+TGG | 0.253653 | 3_4:+56650492 | Msa0508540:CDS |
| TTATTTAATTGTAGGTAAAA+AGG | 0.256204 | 3_4:+56649078 | Msa0508540:intron |
| ACCAAAATATTCACAACAAT+TGG | 0.256396 | 3_4:+56650242 | Msa0508540:CDS |
| ATCTTTCAGCTCTTGGAGTT+TGG | 0.276364 | 3_4:+56649583 | Msa0508540:CDS |
| AAGTCCGATGTATGAGTATT+TGG | 0.293374 | 3_4:+56650730 | Msa0508540:CDS |
| GAAGAAGTAGCTTAAATTTA+CGG | 0.297415 | 3_4:+56647299 | Msa0508540:five_prime_UTR |
| AGCCGCTATGAATGTGTTAA+AGG | 0.301338 | 3_4:-56650834 | None:intergenic |
| ATTCCTCATCTTTCAGCTCT+TGG | 0.319082 | 3_4:+56649576 | Msa0508540:CDS |
| TGGTTCCTCTTGGTTGGGTA+GGG | 0.321672 | 3_4:+56648849 | Msa0508540:CDS |
| TCTTTGCCTTGTAGTACATA+TGG | 0.322707 | 3_4:-56650934 | None:intergenic |
| ATTGCTATGCTCCATGAATA+TGG | 0.328776 | 3_4:+56648926 | Msa0508540:CDS |
| ATGTACATGGTTACCTTTGC+AGG | 0.331651 | 3_4:+56650485 | Msa0508540:CDS |
| TTTGCAGGATACTGGGCTTA+TGG | 0.333787 | 3_4:+56650500 | Msa0508540:CDS |
| TGGATACTCAGGGACCATTA+TGG | 0.339605 | 3_4:+56648829 | Msa0508540:CDS |
| CCATTATGGTTCCTCTTGGT+TGG | 0.339833 | 3_4:+56648843 | Msa0508540:CDS |
| TTCATCATGTTCTTCACAAC+TGG | 0.344841 | 3_4:-56650425 | None:intergenic |
| TCAGCTCTTGGAGTTTGGTT+GGG | 0.354431 | 3_4:+56649588 | Msa0508540:CDS |
| GATCTTGCTGGATATATATA+TGG | 0.362894 | 3_4:+56648974 | Msa0508540:CDS |
| CCAAAATATTCACAACAATT+GGG | 0.362920 | 3_4:+56650243 | Msa0508540:CDS |
| TTCAGCTCTTGGAGTTTGGT+TGG | 0.369188 | 3_4:+56649587 | Msa0508540:CDS |
| TTGAAGGAAGGCTGTAATAT+TGG | 0.378244 | 3_4:-56650585 | None:intergenic |
| GTGCACGCTATTCAGCAAAT+AGG | 0.379972 | 3_4:-56650537 | None:intergenic |
| GTCTTGTCCCTCCATATTCA+TGG | 0.380371 | 3_4:-56648937 | None:intergenic |
| TGTAACCCTCATACACTATA+TGG | 0.386627 | 3_4:-56651307 | None:intergenic |
| CCATCATCATGAATCTTGTT+AGG | 0.396564 | 3_4:-56647398 | None:intergenic |
| TCCAGCTTGGGTGAAAGCTT+TGG | 0.397072 | 3_4:+56650562 | Msa0508540:CDS |
| ACAACTTCAGAACAGAATAT+TGG | 0.401255 | 3_4:+56647272 | Msa0508540:five_prime_UTR |
| CATTATGGTTCCTCTTGGTT+GGG | 0.403721 | 3_4:+56648844 | Msa0508540:CDS |
| TGTATGAGGGTTACACTATC+AGG | 0.410209 | 3_4:+56651315 | Msa0508540:three_prime_UTR |
| ATGGTTCCTCTTGGTTGGGT+AGG | 0.416120 | 3_4:+56648848 | Msa0508540:CDS |
| GCCAAAGCTTTCACCCAAGC+TGG | 0.426229 | 3_4:-56650563 | None:intergenic |
| GGTTCCTCTTGGTTGGGTAG+GGG | 0.426770 | 3_4:+56648850 | Msa0508540:CDS |
| TAATTTGATGAGCAGTTTCT+GGG | 0.429639 | 3_4:-56647430 | None:intergenic |
| CGGCATGCTTCCTGAGATAC+AGG | 0.431193 | 3_4:+56650298 | Msa0508540:CDS |
| GTGGGATGTGTCCTCACTAC+TGG | 0.431656 | 3_4:+56648785 | Msa0508540:CDS |
| GCGGCTCTTCTGCCATTCCT+TGG | 0.436629 | 3_4:+56650851 | Msa0508540:CDS |
| GTTCCTCTTGGTTGGGTAGG+GGG | 0.437185 | 3_4:+56648851 | Msa0508540:CDS |
| AAATGCTTTCATTGTTGGAT+AGG | 0.440493 | 3_4:+56651163 | Msa0508540:three_prime_UTR |
| ATCATTGGTTGTTACGTTGA+AGG | 0.441028 | 3_4:+56647178 | Msa0508540:five_prime_UTR |
| GTGTACAGAAGGGAGGGCTC+TGG | 0.447589 | 3_4:+56650972 | Msa0508540:CDS |
| GTCTATCTGACCTGTATCTC+AGG | 0.450002 | 3_4:-56650308 | None:intergenic |
| CTGTGGTTTCAGTTTACCAT+TGG | 0.450914 | 3_4:+56650452 | Msa0508540:CDS |
| AATGCACCATATAGTGTATG+AGG | 0.456813 | 3_4:+56651301 | Msa0508540:three_prime_UTR |
| TCATTTAGAGTCGGAGTAAG+AGG | 0.457265 | 3_4:+56650800 | Msa0508540:CDS |
| GGGACCATTATGGTTCCTCT+TGG | 0.458907 | 3_4:+56648839 | Msa0508540:CDS |
| CCGTATTGTATTGCTATAGC+TGG | 0.460031 | 3_4:+56649525 | Msa0508540:CDS |
| TAGCGTGCACGGTCCAGCTT+GGG | 0.462680 | 3_4:+56650550 | Msa0508540:CDS |
| TCTGTTGAAAAGACAACTCT+TGG | 0.464829 | 3_4:+56651216 | Msa0508540:three_prime_UTR |
| GCTTATGTGCTTGGATACTC+AGG | 0.465982 | 3_4:+56648818 | Msa0508540:CDS |
| CCACCTACGGTAACAACAAT+GGG | 0.475476 | 3_4:+56647359 | Msa0508540:exon |
| CACAACTGGCTGCTTAATTG+TGG | 0.478479 | 3_4:-56650411 | None:intergenic |
| CCCATTGTTGTTACCGTAGG+TGG | 0.481174 | 3_4:-56647359 | None:intergenic |
| CGGAGTAAGAGGTGGTTACC+TGG | 0.486173 | 3_4:+56650811 | Msa0508540:CDS |
| TGTATACATTGTCATAGCAT+TGG | 0.487225 | 3_4:+56649632 | Msa0508540:CDS |
| ATTAGATACAGAGATCTTGC+TGG | 0.488924 | 3_4:+56648962 | Msa0508540:CDS |
| TCATTGGTTGTTACGTTGAA+GGG | 0.493431 | 3_4:+56647179 | Msa0508540:five_prime_UTR |
| GGTTACCTTTGCAGGATACT+GGG | 0.495231 | 3_4:+56650493 | Msa0508540:CDS |
| GTCAACAGTGCTTATGTGCT+TGG | 0.495512 | 3_4:+56648809 | Msa0508540:CDS |
| GGATATCGATACGATATCAT+TGG | 0.501208 | 3_4:+56647163 | Msa0508540:five_prime_UTR |
| GAGTATTTGGATACTAGATA+CGG | 0.506955 | 3_4:+56650743 | Msa0508540:CDS |
| ATAGCGTGCACGGTCCAGCT+TGG | 0.509613 | 3_4:+56650549 | Msa0508540:CDS |
| CAGCAACTGTTGCGGCAGTA+CGG | 0.519965 | 3_4:+56651029 | Msa0508540:CDS |
| TTACCCATTGTTGTTACCGT+AGG | 0.520185 | 3_4:-56647362 | None:intergenic |
| TTTGAGATCTCTCATACCGC+TGG | 0.525161 | 3_4:+56647236 | Msa0508540:five_prime_UTR |
| TGTACAGAAGGGAGGGCTCT+GGG | 0.526001 | 3_4:+56650973 | Msa0508540:CDS |
| ACAACAATTGCCACCACCTA+CGG | 0.529612 | 3_4:+56647346 | Msa0508540:five_prime_UTR |
| TGGACTTGTACCAATGTACA+TGG | 0.531370 | 3_4:+56650472 | Msa0508540:CDS |
| CAAACTATCAAGTGTACAGA+AGG | 0.534807 | 3_4:+56650961 | Msa0508540:CDS |
| TGAAAGATGAGGAATGCAAA+TGG | 0.537838 | 3_4:-56649568 | None:intergenic |
| CCAACCAAGAGGAACCATAA+TGG | 0.541448 | 3_4:-56648843 | None:intergenic |
| AATGCTTATATATAGAAGAC+AGG | 0.542308 | 3_4:+56647211 | Msa0508540:five_prime_UTR |
| GTAATGCAATGACTGATTGA+AGG | 0.542448 | 3_4:-56650601 | None:intergenic |
| CTAGTGTTCGCATACAATAC+CGG | 0.545518 | 3_4:+56650278 | Msa0508540:CDS |
| CTATGAATGTGTTAAAGGCC+AGG | 0.545650 | 3_4:-56650829 | None:intergenic |
| CTCTCGAAATCTCCAAGGAA+TGG | 0.547393 | 3_4:-56650863 | None:intergenic |
| GGAGATTTCGAGAGTCTCAC+AGG | 0.554644 | 3_4:+56650872 | Msa0508540:CDS |
| TGCAGATTCATGGTTTCAAG+TGG | 0.558255 | 3_4:+56648766 | Msa0508540:intron |
| AAGAACTTGTCATTTAGAGT+CGG | 0.561515 | 3_4:+56650791 | Msa0508540:CDS |
| ACCACCTACGGTAACAACAA+TGG | 0.561583 | 3_4:+56647358 | Msa0508540:exon |
| CAAAATATTCACAACAATTG+GGG | 0.561887 | 3_4:+56650244 | Msa0508540:CDS |
| GTATCCAAATACTCATACAT+CGG | 0.565959 | 3_4:-56650734 | None:intergenic |
| CCTAACAAGATTCATGATGA+TGG | 0.566611 | 3_4:+56647398 | Msa0508540:CDS |
| AAAAGGCATATTCTATCACA+TGG | 0.568216 | 3_4:+56649095 | Msa0508540:CDS |
| GATCAGTGGAGAAGCAATGA+AGG | 0.569332 | 3_4:+56650766 | Msa0508540:CDS |
| ATTGTTGTTACCGTAGGTGG+TGG | 0.574248 | 3_4:-56647356 | None:intergenic |
| GTCTATTGCAGCAACTGTTG+CGG | 0.576459 | 3_4:+56651021 | Msa0508540:CDS |
| TTGCAAGAATAAATGTAAGC+GGG | 0.576732 | 3_4:-56650910 | None:intergenic |
| CCAGCTATAGCAATACAATA+CGG | 0.578861 | 3_4:-56649525 | None:intergenic |
| ACAACAATGGGTAAAGGAAG+AGG | 0.581226 | 3_4:+56647371 | Msa0508540:exon |
| CAATGGTAAACTGAAACCAC+AGG | 0.585074 | 3_4:-56650451 | None:intergenic |
| ACGGTAACAACAATGGGTAA+AGG | 0.586107 | 3_4:+56647365 | Msa0508540:exon |
| CTGTATCTCAGGAAGCATGC+CGG | 0.587899 | 3_4:-56650297 | None:intergenic |
| GAGGCTAAAGAAAACAATGT+TGG | 0.588227 | 3_4:-56650996 | None:intergenic |
| TTGGTGCTGTCGATTAAAGA+TGG | 0.589660 | 3_4:+56649651 | Msa0508540:CDS |
| GTTACACTATCAGGTTCAGT+TGG | 0.590434 | 3_4:+56651324 | Msa0508540:three_prime_UTR |
| GCAGATTCATGGTTTCAAGT+GGG | 0.595461 | 3_4:+56648767 | Msa0508540:intron |
| AGTATTTGGATACTAGATAC+GGG | 0.598892 | 3_4:+56650744 | Msa0508540:CDS |
| GATACTAGATACGGGATCAG+TGG | 0.600042 | 3_4:+56650752 | Msa0508540:CDS |
| TGCAAACCATATGTACTACA+AGG | 0.605665 | 3_4:+56650928 | Msa0508540:CDS |
| TGCTATGACAATGTATACAA+AGG | 0.606274 | 3_4:-56649628 | None:intergenic |
| ACTGCTCATCAAATTAGCAC+CGG | 0.606729 | 3_4:+56647437 | Msa0508540:CDS |
| ACTTCAGAACAGAATATTGG+CGG | 0.609822 | 3_4:+56647275 | Msa0508540:five_prime_UTR |
| TATCAAGTGTACAGAAGGGA+GGG | 0.613459 | 3_4:+56650966 | Msa0508540:CDS |
| CTATGCTCCATGAATATGGA+GGG | 0.617895 | 3_4:+56648930 | Msa0508540:CDS |
| TATTTGCTGAATAGCGTGCA+CGG | 0.618514 | 3_4:+56650539 | Msa0508540:CDS |
| GCTATGCTCCATGAATATGG+AGG | 0.628110 | 3_4:+56648929 | Msa0508540:CDS |
| ATTAGCATAGAGCGAAATCG+CGG | 0.629033 | 3_4:-56648897 | None:intergenic |
| CACTGTTGACTCCAGTAGTG+AGG | 0.634084 | 3_4:-56648796 | None:intergenic |
| GTACATTGGTACAAGTCCAA+TGG | 0.635192 | 3_4:-56650468 | None:intergenic |
| ACTCCAAGAGCTGAAAGATG+AGG | 0.637059 | 3_4:-56649579 | None:intergenic |
| TTTGCAAGAATAAATGTAAG+CGG | 0.638473 | 3_4:-56650911 | None:intergenic |
| TGAGACTCTCGAAATCTCCA+AGG | 0.640360 | 3_4:-56650868 | None:intergenic |
| CTTATGTGCTTGGATACTCA+GGG | 0.644689 | 3_4:+56648819 | Msa0508540:CDS |
| TTTAGAGTCGGAGTAAGAGG+TGG | 0.647394 | 3_4:+56650803 | Msa0508540:CDS |
| TGCAATGACTGATTGAAGGA+AGG | 0.648266 | 3_4:-56650597 | None:intergenic |
| CTATCAAGTGTACAGAAGGG+AGG | 0.648468 | 3_4:+56650965 | Msa0508540:CDS |
| ATAAGCCCAGTATCCTGCAA+AGG | 0.654594 | 3_4:-56650498 | None:intergenic |
| ATGCACCATATAGTGTATGA+GGG | 0.655597 | 3_4:+56651302 | Msa0508540:three_prime_UTR |
| GCAAAGGTAACCATGTACAT+TGG | 0.656882 | 3_4:-56650482 | None:intergenic |
| CAGTTGCTGCAATAGACATG+AGG | 0.663766 | 3_4:-56651015 | None:intergenic |
| AAACTATCAAGTGTACAGAA+GGG | 0.684291 | 3_4:+56650962 | Msa0508540:CDS |
| AAAGGCATATTCTATCACAT+GGG | 0.685218 | 3_4:+56649096 | Msa0508540:CDS |
| GGCCTTTAACACATTCATAG+CGG | 0.702664 | 3_4:+56650832 | Msa0508540:CDS |
| TGTTGATAAGAATCAACCAG+CGG | 0.728252 | 3_4:-56647252 | None:intergenic |
| AATGGTAAACTGAAACCACA+GGG | 0.745661 | 3_4:-56650450 | None:intergenic |
| AGAACATGATGAAATCCCTG+TGG | 0.798517 | 3_4:+56650435 | Msa0508540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTAAAAGGAAAAATTA+AGG | - | chr3_4:56647482-56647501 | None:intergenic | 10.0% |
| !!! | GTTTTATATTTAATTTTGAA+AGG | + | chr3_4:56647523-56647542 | Msa0508540:intron | 10.0% |
| !!! | CAACAAAATAATATTTTTTT+TGG | - | chr3_4:56647876-56647895 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAGAGTTTAA+TGG | + | chr3_4:56647982-56648001 | Msa0508540:intron | 10.0% |
| !!! | AATAAAAATTTAGAATATAC+AGG | + | chr3_4:56648485-56648504 | Msa0508540:intron | 10.0% |
| !!! | AATTAACTAATTTTTTTTTC+TGG | + | chr3_4:56648693-56648712 | Msa0508540:intron | 10.0% |
| !!! | TGTTTTAATTTAATTTTAAC+TGG | + | chr3_4:56648728-56648747 | Msa0508540:intron | 10.0% |
| !!! | GTTTTAATTTAATTTTAACT+GGG | + | chr3_4:56648729-56648748 | Msa0508540:intron | 10.0% |
| !!! | TTTTCATTTTATTTAATTGT+AGG | + | chr3_4:56649070-56649089 | Msa0508540:intron | 10.0% |
| !!! | AATATACAATTTTAATTGAA+TGG | - | chr3_4:56649208-56649227 | None:intergenic | 10.0% |
| !! | CAAACTATATATTTATATTT+AGG | - | chr3_4:56650127-56650146 | None:intergenic | 10.0% |
| !!! | TTCTATATATAAGCATTTTT+TGG | - | chr3_4:56647208-56647227 | None:intergenic | 15.0% |
| !!! | TGTGTAAAATAATTTTTCAA+TGG | + | chr3_4:56648218-56648237 | Msa0508540:intron | 15.0% |
| !! | TTATTTAATTGTAGGTAAAA+AGG | + | chr3_4:56649078-56649097 | Msa0508540:intron | 15.0% |
| !!! | AGTCCATAATATTTTTTAAT+GGG | - | chr3_4:56649323-56649342 | None:intergenic | 15.0% |
| !!! | TAGTCCATAATATTTTTTAA+TGG | - | chr3_4:56649324-56649343 | None:intergenic | 15.0% |
| !! | TGCTAACTTTATAAATATAA+GGG | + | chr3_4:56649855-56649874 | Msa0508540:intron | 15.0% |
| !! | TGCTAACTTTATAAATATAA+GGG | + | chr3_4:56649855-56649874 | Msa0508540:intron | 15.0% |
| !! | AAAAGGAAAAATTAAGGTTA+TGG | - | chr3_4:56647476-56647495 | None:intergenic | 20.0% |
| !! | TATGTAAACAAAACAAACAT+AGG | - | chr3_4:56647768-56647787 | None:intergenic | 20.0% |
| !!! | ATTCTAAATGTTTTGATAGA+TGG | - | chr3_4:56648032-56648051 | None:intergenic | 20.0% |
| !! | ATCTATCAAAACATTTAGAA+TGG | + | chr3_4:56648031-56648050 | Msa0508540:intron | 20.0% |
| !!! | GTATTTTAATATTTGCATAG+TGG | - | chr3_4:56648149-56648168 | None:intergenic | 20.0% |
| !!! | AACTGAAGAAGTATATTAAA+GGG | - | chr3_4:56648673-56648692 | None:intergenic | 20.0% |
| !!! | TAACTGAAGAAGTATATTAA+AGG | - | chr3_4:56648674-56648693 | None:intergenic | 20.0% |
| !!! | TTAATTTAATTTTAACTGGG+TGG | + | chr3_4:56648732-56648751 | Msa0508540:intron | 20.0% |
| !! | GGATATATATATGGTAAATA+AGG | + | chr3_4:56648983-56649002 | Msa0508540:intron | 20.0% |
| !!! | AATCTTTTCATGATAAATAC+TGG | + | chr3_4:56649133-56649152 | Msa0508540:CDS | 20.0% |
| !! | TTTGAAAGTAAGAGAAATTT+AGG | + | chr3_4:56649180-56649199 | Msa0508540:intron | 20.0% |
| !! | GTTATTTAGTAAAGAAAGTT+TGG | - | chr3_4:56649277-56649296 | None:intergenic | 20.0% |
| !!! | TTGAGCATTATTTTTTGTAA+AGG | + | chr3_4:56649346-56649365 | Msa0508540:intron | 20.0% |
| !!! | ATTTTTTGTAAAGGACTAAA+AGG | + | chr3_4:56649355-56649374 | Msa0508540:intron | 20.0% |
| !!! | TTTAGATAAGTGGATTATTA+TGG | - | chr3_4:56649762-56649781 | None:intergenic | 20.0% |
| !! | CTGCTAACTTTATAAATATA+AGG | + | chr3_4:56649854-56649873 | Msa0508540:intron | 20.0% |
| !! | CTGCTAACTTTATAAATATA+AGG | + | chr3_4:56649854-56649873 | Msa0508540:intron | 20.0% |
| !! | CAAATATAGTATAAATACCT+TGG | - | chr3_4:56650063-56650082 | None:intergenic | 20.0% |
| !!! | CAAGGTATTTATACTATATT+TGG | + | chr3_4:56650061-56650080 | Msa0508540:intron | 20.0% |
| !! | TGAAACTTAATATGAAGATA+TGG | - | chr3_4:56650346-56650365 | None:intergenic | 20.0% |
| !!! | ATTTTAAATGCTTTCATTGT+TGG | + | chr3_4:56651158-56651177 | Msa0508540:three_prime_UTR | 20.0% |
| ! | AATGCTTATATATAGAAGAC+AGG | + | chr3_4:56647211-56647230 | Msa0508540:five_prime_UTR | 25.0% |
| ! | GAAGAAGTAGCTTAAATTTA+CGG | + | chr3_4:56647299-56647318 | Msa0508540:five_prime_UTR | 25.0% |
| ! | TTTGAAAATTCCCATGTTTA+TGG | + | chr3_4:56647563-56647582 | Msa0508540:intron | 25.0% |
| !!! | TTTGTTTTTCTTTCCAAACA+AGG | + | chr3_4:56647698-56647717 | Msa0508540:intron | 25.0% |
| !!! | TTGTTTTTCTTTCCAAACAA+GGG | + | chr3_4:56647699-56647718 | Msa0508540:intron | 25.0% |
| ! | AACATAGGTAAACTACAAAA+GGG | - | chr3_4:56647753-56647772 | None:intergenic | 25.0% |
| ! | AAACATAGGTAAACTACAAA+AGG | - | chr3_4:56647754-56647773 | None:intergenic | 25.0% |
| !! | TTTTAATATTTGCATAGTGG+TGG | - | chr3_4:56648146-56648165 | None:intergenic | 25.0% |
| !! | ACTGAAGAAGTATATTAAAG+GGG | - | chr3_4:56648672-56648691 | None:intergenic | 25.0% |
| !! | AGATTTCTAATGTGTTTTGT+TGG | - | chr3_4:56649009-56649028 | None:intergenic | 25.0% |
| !!! | AAATACTGGTTACATCATTT+TGG | + | chr3_4:56649147-56649166 | Msa0508540:CDS | 25.0% |
| !!! | AAGTTTGGATTAGTTTTTGT+CGG | - | chr3_4:56649262-56649281 | None:intergenic | 25.0% |
| !!! | CCATAATATTTTTTAATGGG+AGG | - | chr3_4:56649320-56649339 | None:intergenic | 25.0% |
| ! | CCTCCCATTAAAAAATATTA+TGG | + | chr3_4:56649317-56649336 | Msa0508540:intron | 25.0% |
| ! | TAATGAGTAAAGACTCAATT+CGG | - | chr3_4:56649403-56649422 | None:intergenic | 25.0% |
| ! | ACTAGTTAAGGAAACAAAAA+AGG | + | chr3_4:56649903-56649922 | Msa0508540:intron | 25.0% |
| ! | ACTAGTTAAGGAAACAAAAA+AGG | + | chr3_4:56649903-56649922 | Msa0508540:intron | 25.0% |
| ! | ACCAAAATATTCACAACAAT+TGG | + | chr3_4:56650242-56650261 | Msa0508540:CDS | 25.0% |
| ! | CCAAAATATTCACAACAATT+GGG | + | chr3_4:56650243-56650262 | Msa0508540:CDS | 25.0% |
| ! | CAAAATATTCACAACAATTG+GGG | + | chr3_4:56650244-56650263 | Msa0508540:CDS | 25.0% |
| !! | TATTTGTTAATGTAACTTGC+AGG | + | chr3_4:56650388-56650407 | Msa0508540:intron | 25.0% |
| ! | TTTGCAAGAATAAATGTAAG+CGG | - | chr3_4:56650914-56650933 | None:intergenic | 25.0% |
| ACAACTTCAGAACAGAATAT+TGG | + | chr3_4:56647272-56647291 | Msa0508540:five_prime_UTR | 30.0% | |
| TAATTTGATGAGCAGTTTCT+GGG | - | chr3_4:56647433-56647452 | None:intergenic | 30.0% | |
| !! | TGTACGTGTCGATTATTAAA+AGG | + | chr3_4:56647894-56647913 | Msa0508540:intron | 30.0% |
| !! | CTTTTCTTTTTGAAGAGTGT+CGG | + | chr3_4:56648345-56648364 | Msa0508540:intron | 30.0% |
| CACATATCACAGCTTATTAT+TGG | - | chr3_4:56648383-56648402 | None:intergenic | 30.0% | |
| ATAATAAGCTGTGATATGTG+TGG | + | chr3_4:56648383-56648402 | Msa0508540:intron | 30.0% | |
| GTGAATATGAATGTTACTCA+TGG | - | chr3_4:56648460-56648479 | None:intergenic | 30.0% | |
| TATTCACTCTTGAGAAGAAA+CGG | + | chr3_4:56648638-56648657 | Msa0508540:intron | 30.0% | |
| ! | CTGAAGAAGTATATTAAAGG+GGG | - | chr3_4:56648671-56648690 | None:intergenic | 30.0% |
| !!! | ATTTTAACTGGGTGGTAATT+TGG | + | chr3_4:56648740-56648759 | Msa0508540:intron | 30.0% |
| !!! | AATTTGGTTTTGCAGATTCA+TGG | + | chr3_4:56648756-56648775 | Msa0508540:intron | 30.0% |
| GATCTTGCTGGATATATATA+TGG | + | chr3_4:56648974-56648993 | Msa0508540:CDS | 30.0% | |
| ! | AAAAGGCATATTCTATCACA+TGG | + | chr3_4:56649095-56649114 | Msa0508540:CDS | 30.0% |
| ! | AAAGGCATATTCTATCACAT+GGG | + | chr3_4:56649096-56649115 | Msa0508540:CDS | 30.0% |
| !!! | AGTTTGGATTAGTTTTTGTC+GGG | - | chr3_4:56649261-56649280 | None:intergenic | 30.0% |
| TGCTATGACAATGTATACAA+AGG | - | chr3_4:56649631-56649650 | None:intergenic | 30.0% | |
| TGTATACATTGTCATAGCAT+TGG | + | chr3_4:56649632-56649651 | Msa0508540:CDS | 30.0% | |
| ! | CAATTGGTTTAAAGAACTGA+TGG | - | chr3_4:56649738-56649757 | None:intergenic | 30.0% |
| !! | AGTGGATTATTATGGACAAT+TGG | - | chr3_4:56649754-56649773 | None:intergenic | 30.0% |
| CTGAGTAAACTTTAGATAAG+TGG | - | chr3_4:56649772-56649791 | None:intergenic | 30.0% | |
| AGTTTACTCAGTTATACACT+AGG | + | chr3_4:56649781-56649800 | Msa0508540:intron | 30.0% | |
| ! | CCCAATTGTTGTGAATATTT+TGG | - | chr3_4:56650246-56650265 | None:intergenic | 30.0% |
| TTACTCAATTTGTGTTTACC+TGG | + | chr3_4:56650670-56650689 | Msa0508540:intron | 30.0% | |
| GAAATAGAACACAGGTTATT+AGG | - | chr3_4:56650696-56650715 | None:intergenic | 30.0% | |
| GTATCCAAATACTCATACAT+CGG | - | chr3_4:56650737-56650756 | None:intergenic | 30.0% | |
| GAGTATTTGGATACTAGATA+CGG | + | chr3_4:56650743-56650762 | Msa0508540:CDS | 30.0% | |
| AGTATTTGGATACTAGATAC+GGG | + | chr3_4:56650744-56650763 | Msa0508540:CDS | 30.0% | |
| ! | AAGAACTTGTCATTTAGAGT+CGG | + | chr3_4:56650791-56650810 | Msa0508540:CDS | 30.0% |
| TTGCAAGAATAAATGTAAGC+GGG | - | chr3_4:56650913-56650932 | None:intergenic | 30.0% | |
| AAACTATCAAGTGTACAGAA+GGG | + | chr3_4:56650962-56650981 | Msa0508540:CDS | 30.0% | |
| AAATGCTTTCATTGTTGGAT+AGG | + | chr3_4:56651163-56651182 | Msa0508540:three_prime_UTR | 30.0% | |
| ! | AGTTCTAACATCAAATACAC+AGG | + | chr3_4:56651254-56651273 | Msa0508540:intron | 30.0% |
| GGATATCGATACGATATCAT+TGG | + | chr3_4:56647163-56647182 | Msa0508540:five_prime_UTR | 35.0% | |
| ! | ATCATTGGTTGTTACGTTGA+AGG | + | chr3_4:56647178-56647197 | Msa0508540:five_prime_UTR | 35.0% |
| ! | TCATTGGTTGTTACGTTGAA+GGG | + | chr3_4:56647179-56647198 | Msa0508540:five_prime_UTR | 35.0% |
| ! | TGTTGATAAGAATCAACCAG+CGG | - | chr3_4:56647255-56647274 | None:intergenic | 35.0% |
| ACTTCAGAACAGAATATTGG+CGG | + | chr3_4:56647275-56647294 | Msa0508540:five_prime_UTR | 35.0% | |
| CCATCATCATGAATCTTGTT+AGG | - | chr3_4:56647401-56647420 | None:intergenic | 35.0% | |
| CCTAACAAGATTCATGATGA+TGG | + | chr3_4:56647398-56647417 | Msa0508540:CDS | 35.0% | |
| CTAATTTGATGAGCAGTTTC+TGG | - | chr3_4:56647434-56647453 | None:intergenic | 35.0% | |
| TTATGGTGTGAGATACAAAC+CGG | - | chr3_4:56647459-56647478 | None:intergenic | 35.0% | |
| TTCAGCAAGAACATGAATCT+CGG | - | chr3_4:56647592-56647611 | None:intergenic | 35.0% | |
| !! | GTGATTAATTTGCCCTTGTT+TGG | - | chr3_4:56647714-56647733 | None:intergenic | 35.0% |
| GCAGAATCAAAATTCAGTCA+TGG | - | chr3_4:56647807-56647826 | None:intergenic | 35.0% | |
| TGGAAACAACGAGTTATTCA+AGG | - | chr3_4:56648440-56648459 | None:intergenic | 35.0% | |
| AGAAAACTGATATTAGTGCC+AGG | - | chr3_4:56648609-56648628 | None:intergenic | 35.0% | |
| ATTGCTATGCTCCATGAATA+TGG | + | chr3_4:56648926-56648945 | Msa0508540:CDS | 35.0% | |
| ATTAGATACAGAGATCTTGC+TGG | + | chr3_4:56648962-56648981 | Msa0508540:CDS | 35.0% | |
| TTGTAAAGGACTAAAAGGAC+CGG | + | chr3_4:56649360-56649379 | Msa0508540:intron | 35.0% | |
| !!! | GGTCCTTTAAAATTTTCTCC+CGG | - | chr3_4:56649382-56649401 | None:intergenic | 35.0% |
| !!! | TCTAGTGACTTTTTTGACAC+CGG | + | chr3_4:56649438-56649457 | Msa0508540:intron | 35.0% |
| CCAGCTATAGCAATACAATA+CGG | - | chr3_4:56649528-56649547 | None:intergenic | 35.0% | |
| TGAAAGATGAGGAATGCAAA+TGG | - | chr3_4:56649571-56649590 | None:intergenic | 35.0% | |
| TGGTTTAAAGAACTGATGGT+AGG | - | chr3_4:56649734-56649753 | None:intergenic | 35.0% | |
| TTCATCATGTTCTTCACAAC+TGG | - | chr3_4:56650428-56650447 | None:intergenic | 35.0% | |
| AATGGTAAACTGAAACCACA+GGG | - | chr3_4:56650453-56650472 | None:intergenic | 35.0% | |
| TTGAAGGAAGGCTGTAATAT+TGG | - | chr3_4:56650588-56650607 | None:intergenic | 35.0% | |
| GTAATGCAATGACTGATTGA+AGG | - | chr3_4:56650604-56650623 | None:intergenic | 35.0% | |
| ATCTGTCAGAAATAGAACAC+AGG | - | chr3_4:56650704-56650723 | None:intergenic | 35.0% | |
| AAGTCCGATGTATGAGTATT+TGG | + | chr3_4:56650730-56650749 | Msa0508540:CDS | 35.0% | |
| TGCAAACCATATGTACTACA+AGG | + | chr3_4:56650928-56650947 | Msa0508540:CDS | 35.0% | |
| TCTTTGCCTTGTAGTACATA+TGG | - | chr3_4:56650937-56650956 | None:intergenic | 35.0% | |
| CAAACTATCAAGTGTACAGA+AGG | + | chr3_4:56650961-56650980 | Msa0508540:CDS | 35.0% | |
| GAGGCTAAAGAAAACAATGT+TGG | - | chr3_4:56650999-56651018 | None:intergenic | 35.0% | |
| TCTGTTGAAAAGACAACTCT+TGG | + | chr3_4:56651216-56651235 | Msa0508540:three_prime_UTR | 35.0% | |
| AATGCACCATATAGTGTATG+AGG | + | chr3_4:56651301-56651320 | Msa0508540:three_prime_UTR | 35.0% | |
| ATGCACCATATAGTGTATGA+GGG | + | chr3_4:56651302-56651321 | Msa0508540:three_prime_UTR | 35.0% | |
| TGTAACCCTCATACACTATA+TGG | - | chr3_4:56651310-56651329 | None:intergenic | 35.0% | |
| ! | TTACCCATTGTTGTTACCGT+AGG | - | chr3_4:56647365-56647384 | None:intergenic | 40.0% |
| ACGGTAACAACAATGGGTAA+AGG | + | chr3_4:56647365-56647384 | Msa0508540:exon | 40.0% | |
| ACAACAATGGGTAAAGGAAG+AGG | + | chr3_4:56647371-56647390 | Msa0508540:exon | 40.0% | |
| ACTGCTCATCAAATTAGCAC+CGG | + | chr3_4:56647437-56647456 | Msa0508540:CDS | 40.0% | |
| ATCTCGGACTCCATAAACAT+GGG | - | chr3_4:56647576-56647595 | None:intergenic | 40.0% | |
| AATCTCGGACTCCATAAACA+TGG | - | chr3_4:56647577-56647596 | None:intergenic | 40.0% | |
| !! | TTTGCATAGTGGTGGATTGA+CGG | - | chr3_4:56648138-56648157 | None:intergenic | 40.0% |
| TTAGTGCCAGGAAGTCAAAA+GGG | - | chr3_4:56648597-56648616 | None:intergenic | 40.0% | |
| ATTAGTGCCAGGAAGTCAAA+AGG | - | chr3_4:56648598-56648617 | None:intergenic | 40.0% | |
| TGCAGATTCATGGTTTCAAG+TGG | + | chr3_4:56648766-56648785 | Msa0508540:intron | 40.0% | |
| ! | GCAGATTCATGGTTTCAAGT+GGG | + | chr3_4:56648767-56648786 | Msa0508540:intron | 40.0% |
| CTTATGTGCTTGGATACTCA+GGG | + | chr3_4:56648819-56648838 | Msa0508540:CDS | 40.0% | |
| CATTATGGTTCCTCTTGGTT+GGG | + | chr3_4:56648844-56648863 | Msa0508540:CDS | 40.0% | |
| ATTAGCATAGAGCGAAATCG+CGG | - | chr3_4:56648900-56648919 | None:intergenic | 40.0% | |
| CTATGCTCCATGAATATGGA+GGG | + | chr3_4:56648930-56648949 | Msa0508540:CDS | 40.0% | |
| !! | ACTGGTTACATCATTTTGGC+TGG | + | chr3_4:56649151-56649170 | Msa0508540:CDS | 40.0% |
| TTTGTCGGGACTAAATTGAG+TGG | - | chr3_4:56649247-56649266 | None:intergenic | 40.0% | |
| TGTAAAGGACTAAAAGGACC+GGG | + | chr3_4:56649361-56649380 | Msa0508540:intron | 40.0% | |
| ! | GGACCGGGAGAAAATTTTAA+AGG | + | chr3_4:56649376-56649395 | Msa0508540:intron | 40.0% |
| CACCACAGTAAACGTAAAAC+CGG | - | chr3_4:56649460-56649479 | None:intergenic | 40.0% | |
| ! | TTTTACGTTTACTGTGGTGC+AGG | + | chr3_4:56649461-56649480 | Msa0508540:intron | 40.0% |
| TATACCGTCTTTCGAGATGA+TGG | + | chr3_4:56649489-56649508 | Msa0508540:intron | 40.0% | |
| CCGTATTGTATTGCTATAGC+TGG | + | chr3_4:56649525-56649544 | Msa0508540:CDS | 40.0% | |
| ATTCCTCATCTTTCAGCTCT+TGG | + | chr3_4:56649576-56649595 | Msa0508540:CDS | 40.0% | |
| ATCTTTCAGCTCTTGGAGTT+TGG | + | chr3_4:56649583-56649602 | Msa0508540:CDS | 40.0% | |
| !! | TTGGTGCTGTCGATTAAAGA+TGG | + | chr3_4:56649651-56649670 | Msa0508540:CDS | 40.0% |
| CTTTGACTACACAAGTTCCA+AGG | + | chr3_4:56650043-56650062 | Msa0508540:intron | 40.0% | |
| AAAATGTTAACTAGTGCCCC+CGG | - | chr3_4:56650104-56650123 | None:intergenic | 40.0% | |
| GATTACACTGTTCCAGAACA+CGG | + | chr3_4:56650215-56650234 | Msa0508540:intron | 40.0% | |
| !!! | ATTTTGGTTACACCGTGTTC+TGG | - | chr3_4:56650230-56650249 | None:intergenic | 40.0% |
| CTAGTGTTCGCATACAATAC+CGG | + | chr3_4:56650278-56650297 | Msa0508540:CDS | 40.0% | |
| AGAACATGATGAAATCCCTG+TGG | + | chr3_4:56650435-56650454 | Msa0508540:CDS | 40.0% | |
| CAATGGTAAACTGAAACCAC+AGG | - | chr3_4:56650454-56650473 | None:intergenic | 40.0% | |
| CTGTGGTTTCAGTTTACCAT+TGG | + | chr3_4:56650452-56650471 | Msa0508540:CDS | 40.0% | |
| GTACATTGGTACAAGTCCAA+TGG | - | chr3_4:56650471-56650490 | None:intergenic | 40.0% | |
| TGGACTTGTACCAATGTACA+TGG | + | chr3_4:56650472-56650491 | Msa0508540:CDS | 40.0% | |
| GCAAAGGTAACCATGTACAT+TGG | - | chr3_4:56650485-56650504 | None:intergenic | 40.0% | |
| ATGTACATGGTTACCTTTGC+AGG | + | chr3_4:56650485-56650504 | Msa0508540:CDS | 40.0% | |
| ! | TATTTGCTGAATAGCGTGCA+CGG | + | chr3_4:56650539-56650558 | Msa0508540:CDS | 40.0% |
| TGCAATGACTGATTGAAGGA+AGG | - | chr3_4:56650600-56650619 | None:intergenic | 40.0% | |
| ! | TCATTTAGAGTCGGAGTAAG+AGG | + | chr3_4:56650800-56650819 | Msa0508540:CDS | 40.0% |
| CTATGAATGTGTTAAAGGCC+AGG | - | chr3_4:56650832-56650851 | None:intergenic | 40.0% | |
| GGCCTTTAACACATTCATAG+CGG | + | chr3_4:56650832-56650851 | Msa0508540:CDS | 40.0% | |
| AGCCGCTATGAATGTGTTAA+AGG | - | chr3_4:56650837-56650856 | None:intergenic | 40.0% | |
| TATCAAGTGTACAGAAGGGA+GGG | + | chr3_4:56650966-56650985 | Msa0508540:CDS | 40.0% | |
| TGTATGAGGGTTACACTATC+AGG | + | chr3_4:56651315-56651334 | Msa0508540:three_prime_UTR | 40.0% | |
| GTTACACTATCAGGTTCAGT+TGG | + | chr3_4:56651324-56651343 | Msa0508540:three_prime_UTR | 40.0% | |
| ! | TTTGAGATCTCTCATACCGC+TGG | + | chr3_4:56647236-56647255 | Msa0508540:five_prime_UTR | 45.0% |
| ACAACAATTGCCACCACCTA+CGG | + | chr3_4:56647346-56647365 | Msa0508540:five_prime_UTR | 45.0% | |
| ! | ATTGTTGTTACCGTAGGTGG+TGG | - | chr3_4:56647359-56647378 | None:intergenic | 45.0% |
| ACCACCTACGGTAACAACAA+TGG | + | chr3_4:56647358-56647377 | Msa0508540:exon | 45.0% | |
| CCACCTACGGTAACAACAAT+GGG | + | chr3_4:56647359-56647378 | Msa0508540:exon | 45.0% | |
| GAAAGAACATGACGCACATG+CGG | + | chr3_4:56647640-56647659 | Msa0508540:intron | 45.0% | |
| TAGTGCCAGGAAGTCAAAAG+GGG | - | chr3_4:56648596-56648615 | None:intergenic | 45.0% | |
| GTCAACAGTGCTTATGTGCT+TGG | + | chr3_4:56648809-56648828 | Msa0508540:CDS | 45.0% | |
| GCTTATGTGCTTGGATACTC+AGG | + | chr3_4:56648818-56648837 | Msa0508540:CDS | 45.0% | |
| TGGATACTCAGGGACCATTA+TGG | + | chr3_4:56648829-56648848 | Msa0508540:CDS | 45.0% | |
| CCAACCAAGAGGAACCATAA+TGG | - | chr3_4:56648846-56648865 | None:intergenic | 45.0% | |
| CCATTATGGTTCCTCTTGGT+TGG | + | chr3_4:56648843-56648862 | Msa0508540:CDS | 45.0% | |
| GCTATGCTCCATGAATATGG+AGG | + | chr3_4:56648929-56648948 | Msa0508540:CDS | 45.0% | |
| GTCTTGTCCCTCCATATTCA+TGG | - | chr3_4:56648940-56648959 | None:intergenic | 45.0% | |
| !!! | CACCGGTTTTACGTTTACTG+TGG | + | chr3_4:56649455-56649474 | Msa0508540:intron | 45.0% |
| CACACCATCATCTCGAAAGA+CGG | - | chr3_4:56649496-56649515 | None:intergenic | 45.0% | |
| ACTCCAAGAGCTGAAAGATG+AGG | - | chr3_4:56649582-56649601 | None:intergenic | 45.0% | |
| TTCAGCTCTTGGAGTTTGGT+TGG | + | chr3_4:56649587-56649606 | Msa0508540:CDS | 45.0% | |
| TCAGCTCTTGGAGTTTGGTT+GGG | + | chr3_4:56649588-56649607 | Msa0508540:CDS | 45.0% | |
| TGTTTCCTTAACTAGTGCCC+CGG | - | chr3_4:56649899-56649918 | None:intergenic | 45.0% | |
| TGTTTCCTTAACTAGTGCCC+CGG | - | chr3_4:56649899-56649918 | None:intergenic | 45.0% | |
| AAATGTTAACTAGTGCCCCC+GGG | - | chr3_4:56650103-56650122 | None:intergenic | 45.0% | |
| CTAACCAACAATGCATTGCC+AGG | + | chr3_4:56650173-56650192 | Msa0508540:intron | 45.0% | |
| CATTCCTGGCAATGCATTGT+TGG | - | chr3_4:56650180-56650199 | None:intergenic | 45.0% | |
| GTCTATCTGACCTGTATCTC+AGG | - | chr3_4:56650311-56650330 | None:intergenic | 45.0% | |
| CACAACTGGCTGCTTAATTG+TGG | - | chr3_4:56650414-56650433 | None:intergenic | 45.0% | |
| TGGTTACCTTTGCAGGATAC+TGG | + | chr3_4:56650492-56650511 | Msa0508540:CDS | 45.0% | |
| GGTTACCTTTGCAGGATACT+GGG | + | chr3_4:56650493-56650512 | Msa0508540:CDS | 45.0% | |
| ATAAGCCCAGTATCCTGCAA+AGG | - | chr3_4:56650501-56650520 | None:intergenic | 45.0% | |
| TTTGCAGGATACTGGGCTTA+TGG | + | chr3_4:56650500-56650519 | Msa0508540:CDS | 45.0% | |
| GTGCACGCTATTCAGCAAAT+AGG | - | chr3_4:56650540-56650559 | None:intergenic | 45.0% | |
| AGAACACAGGTTATTAGGCC+AGG | - | chr3_4:56650691-56650710 | None:intergenic | 45.0% | |
| GATACTAGATACGGGATCAG+TGG | + | chr3_4:56650752-56650771 | Msa0508540:CDS | 45.0% | |
| GATCAGTGGAGAAGCAATGA+AGG | + | chr3_4:56650766-56650785 | Msa0508540:CDS | 45.0% | |
| ! | TTTAGAGTCGGAGTAAGAGG+TGG | + | chr3_4:56650803-56650822 | Msa0508540:CDS | 45.0% |
| CTCTCGAAATCTCCAAGGAA+TGG | - | chr3_4:56650866-56650885 | None:intergenic | 45.0% | |
| TGAGACTCTCGAAATCTCCA+AGG | - | chr3_4:56650871-56650890 | None:intergenic | 45.0% | |
| CTATCAAGTGTACAGAAGGG+AGG | + | chr3_4:56650965-56650984 | Msa0508540:CDS | 45.0% | |
| CAGTTGCTGCAATAGACATG+AGG | - | chr3_4:56651018-56651037 | None:intergenic | 45.0% | |
| GTCTATTGCAGCAACTGTTG+CGG | + | chr3_4:56651021-56651040 | Msa0508540:CDS | 45.0% | |
| !! | ATACTATAAAATTATTTAAA+AGG | - | chr3_4:56647493-56647512 | None:intergenic | 5.0% |
| ! | CCCATTGTTGTTACCGTAGG+TGG | - | chr3_4:56647362-56647381 | None:intergenic | 50.0% |
| AGTGCCAGGAAGTCAAAAGG+GGG | - | chr3_4:56648595-56648614 | None:intergenic | 50.0% | |
| !! | CACTGTTGACTCCAGTAGTG+AGG | - | chr3_4:56648799-56648818 | None:intergenic | 50.0% |
| GGGACCATTATGGTTCCTCT+TGG | + | chr3_4:56648839-56648858 | Msa0508540:CDS | 50.0% | |
| ATGGTTCCTCTTGGTTGGGT+AGG | + | chr3_4:56648848-56648867 | Msa0508540:CDS | 50.0% | |
| TGGTTCCTCTTGGTTGGGTA+GGG | + | chr3_4:56648849-56648868 | Msa0508540:CDS | 50.0% | |
| ! | GTCTTGTTAACTAGTGCCCC+CGG | + | chr3_4:56649877-56649896 | Msa0508540:intron | 50.0% |
| TCTTGTTAACTAGTGCCCCC+GGG | + | chr3_4:56649878-56649897 | Msa0508540:intron | 50.0% | |
| TTTCCTTAACTAGTGCCCCG+GGG | - | chr3_4:56649897-56649916 | None:intergenic | 50.0% | |
| GTTTCCTTAACTAGTGCCCC+GGG | - | chr3_4:56649898-56649917 | None:intergenic | 50.0% | |
| ! | GTCTTGTTAACTAGTGCCCC+CGG | + | chr3_4:56649877-56649896 | Msa0508540:intron | 50.0% |
| TCTTGTTAACTAGTGCCCCC+GGG | + | chr3_4:56649878-56649897 | Msa0508540:intron | 50.0% | |
| TTTCCTTAACTAGTGCCCCG+GGG | - | chr3_4:56649897-56649916 | None:intergenic | 50.0% | |
| GTTTCCTTAACTAGTGCCCC+GGG | - | chr3_4:56649898-56649917 | None:intergenic | 50.0% | |
| AATGTTAACTAGTGCCCCCG+GGG | - | chr3_4:56650102-56650121 | None:intergenic | 50.0% | |
| CGAGCAGGTGAATTCATTCC+TGG | - | chr3_4:56650194-56650213 | None:intergenic | 50.0% | |
| GGAACAGTGTAATCTCGAGC+AGG | - | chr3_4:56650209-56650228 | None:intergenic | 50.0% | |
| ! | CTGTATCTCAGGAAGCATGC+CGG | - | chr3_4:56650300-56650319 | None:intergenic | 50.0% |
| TCCAGCTTGGGTGAAAGCTT+TGG | + | chr3_4:56650562-56650581 | Msa0508540:CDS | 50.0% | |
| GGAGATTTCGAGAGTCTCAC+AGG | + | chr3_4:56650872-56650891 | Msa0508540:CDS | 50.0% | |
| !!! | ACACCCCCCTTTTGACTTCC+TGG | + | chr3_4:56648588-56648607 | Msa0508540:intron | 55.0% |
| GTGCCAGGAAGTCAAAAGGG+GGG | - | chr3_4:56648594-56648613 | None:intergenic | 55.0% | |
| GTGGGATGTGTCCTCACTAC+TGG | + | chr3_4:56648785-56648804 | Msa0508540:CDS | 55.0% | |
| GGTTCCTCTTGGTTGGGTAG+GGG | + | chr3_4:56648850-56648869 | Msa0508540:CDS | 55.0% | |
| GTTCCTCTTGGTTGGGTAGG+GGG | + | chr3_4:56648851-56648870 | Msa0508540:CDS | 55.0% | |
| CTTGTTAACTAGTGCCCCCG+GGG | + | chr3_4:56649879-56649898 | Msa0508540:intron | 55.0% | |
| TTCCTTAACTAGTGCCCCGG+GGG | - | chr3_4:56649896-56649915 | None:intergenic | 55.0% | |
| CTTGTTAACTAGTGCCCCCG+GGG | + | chr3_4:56649879-56649898 | Msa0508540:intron | 55.0% | |
| TTCCTTAACTAGTGCCCCGG+GGG | - | chr3_4:56649896-56649915 | None:intergenic | 55.0% | |
| GGTTTCCTTAACCAGTGCCC+CGG | + | chr3_4:56650082-56650101 | Msa0508540:intron | 55.0% | |
| GTTTCCTTAACCAGTGCCCC+GGG | + | chr3_4:56650083-56650102 | Msa0508540:intron | 55.0% | |
| TTTCCTTAACCAGTGCCCCG+GGG | + | chr3_4:56650084-56650103 | Msa0508540:intron | 55.0% | |
| CGGCATGCTTCCTGAGATAC+AGG | + | chr3_4:56650298-56650317 | Msa0508540:CDS | 55.0% | |
| GCCAAAGCTTTCACCCAAGC+TGG | - | chr3_4:56650566-56650585 | None:intergenic | 55.0% | |
| CGGAGTAAGAGGTGGTTACC+TGG | + | chr3_4:56650811-56650830 | Msa0508540:CDS | 55.0% | |
| TGTACAGAAGGGAGGGCTCT+GGG | + | chr3_4:56650973-56650992 | Msa0508540:CDS | 55.0% | |
| CAGCAACTGTTGCGGCAGTA+CGG | + | chr3_4:56651029-56651048 | Msa0508540:CDS | 55.0% | |
| ACACCCCCTACCCAACCAAG+AGG | - | chr3_4:56648857-56648876 | None:intergenic | 60.0% | |
| ! | GGTTGGGTAGGGGGTGTAGT+TGG | + | chr3_4:56648860-56648879 | Msa0508540:CDS | 60.0% |
| TTCCTTAACCAGTGCCCCGG+GGG | + | chr3_4:56650085-56650104 | Msa0508540:intron | 60.0% | |
| ATAGCGTGCACGGTCCAGCT+TGG | + | chr3_4:56650549-56650568 | Msa0508540:CDS | 60.0% | |
| TAGCGTGCACGGTCCAGCTT+GGG | + | chr3_4:56650550-56650569 | Msa0508540:CDS | 60.0% | |
| GCGGCTCTTCTGCCATTCCT+TGG | + | chr3_4:56650851-56650870 | Msa0508540:CDS | 60.0% | |
| GTGTACAGAAGGGAGGGCTC+TGG | + | chr3_4:56650972-56650991 | Msa0508540:CDS | 60.0% | |
| ! | TGCCCCCGGGGCACTAGTTA+AGG | + | chr3_4:56649891-56649910 | Msa0508540:intron | 65.0% |
| ! | TGCCCCCGGGGCACTAGTTA+AGG | + | chr3_4:56649891-56649910 | Msa0508540:intron | 65.0% |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | - | chr3_4:56650090-56650109 | None:intergenic | 70.0% |
| AACTAGTGCCCCCGGGGCAC+TGG | - | chr3_4:56649885-56649904 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 56647144 | 56651383 | 56647144 | ID=Msa0508540;Name=Msa0508540 |
| chr3_4 | mRNA | 56647144 | 56651383 | 56647144 | ID=Msa0508540-mRNA-1;Parent=Msa0508540;Name=Msa0508540-mRNA-1;_AED=0.09;_eAED=0.09;_QI=233|0.71|0.62|1|0.71|0.5|8|264|412 |
| chr3_4 | exon | 56647144 | 56647458 | 56647144 | ID=Msa0508540-mRNA-1:exon:12774;Parent=Msa0508540-mRNA-1 |
| chr3_4 | exon | 56648771 | 56648995 | 56648771 | ID=Msa0508540-mRNA-1:exon:12775;Parent=Msa0508540-mRNA-1 |
| chr3_4 | exon | 56649092 | 56649172 | 56649092 | ID=Msa0508540-mRNA-1:exon:12776;Parent=Msa0508540-mRNA-1 |
| chr3_4 | exon | 56649505 | 56649672 | 56649505 | ID=Msa0508540-mRNA-1:exon:12777;Parent=Msa0508540-mRNA-1 |
| chr3_4 | exon | 56650231 | 56650319 | 56650231 | ID=Msa0508540-mRNA-1:exon:12778;Parent=Msa0508540-mRNA-1 |
| chr3_4 | exon | 56650410 | 56650625 | 56650410 | ID=Msa0508540-mRNA-1:exon:12779;Parent=Msa0508540-mRNA-1 |
| chr3_4 | exon | 56650722 | 56651264 | 56650722 | ID=Msa0508540-mRNA-1:exon:12780;Parent=Msa0508540-mRNA-1 |
| chr3_4 | exon | 56651285 | 56651383 | 56651285 | ID=Msa0508540-mRNA-1:exon:12781;Parent=Msa0508540-mRNA-1 |
| chr3_4 | five_prime_UTR | 56647144 | 56647376 | 56647144 | ID=Msa0508540-mRNA-1:five_prime_utr;Parent=Msa0508540-mRNA-1 |
| chr3_4 | CDS | 56647377 | 56647458 | 56647377 | ID=Msa0508540-mRNA-1:cds;Parent=Msa0508540-mRNA-1 |
| chr3_4 | CDS | 56648771 | 56648995 | 56648771 | ID=Msa0508540-mRNA-1:cds;Parent=Msa0508540-mRNA-1 |
| chr3_4 | CDS | 56649092 | 56649172 | 56649092 | ID=Msa0508540-mRNA-1:cds;Parent=Msa0508540-mRNA-1 |
| chr3_4 | CDS | 56649505 | 56649672 | 56649505 | ID=Msa0508540-mRNA-1:cds;Parent=Msa0508540-mRNA-1 |
| chr3_4 | CDS | 56650231 | 56650319 | 56650231 | ID=Msa0508540-mRNA-1:cds;Parent=Msa0508540-mRNA-1 |
| chr3_4 | CDS | 56650410 | 56650625 | 56650410 | ID=Msa0508540-mRNA-1:cds;Parent=Msa0508540-mRNA-1 |
| chr3_4 | CDS | 56650722 | 56651099 | 56650722 | ID=Msa0508540-mRNA-1:cds;Parent=Msa0508540-mRNA-1 |
| chr3_4 | three_prime_UTR | 56651100 | 56651264 | 56651100 | ID=Msa0508540-mRNA-1:three_prime_utr;Parent=Msa0508540-mRNA-1 |
| chr3_4 | three_prime_UTR | 56651285 | 56651383 | 56651285 | ID=Msa0508540-mRNA-1:three_prime_utr;Parent=Msa0508540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
