Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138370 | sp|Q9M1G5|NDC80_ARATH | 44.037 | 109 | 61 | 0 | 1 | 109 | 454 | 562 | 2.94e-26 | 105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138370 | G7IFT2 | 97.619 | 126 | 3 | 0 | 2 | 127 | 450 | 575 | 1.22e-78 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0138370 | 0.831057 | 2.070745e-55 | -8.615850e-47 |
| Msa0006110 | Msa0138370 | 0.832094 | 1.150046e-55 | -8.615850e-47 |
| Msa0014710 | Msa0138370 | 0.829192 | 5.907180e-55 | -8.615850e-47 |
| Msa0017510 | Msa0138370 | 0.816867 | 4.431286e-52 | -8.615850e-47 |
| Msa0020930 | Msa0138370 | 0.804128 | 2.506276e-49 | -8.615850e-47 |
| Msa0022550 | Msa0138370 | 0.802968 | 4.360953e-49 | -8.615850e-47 |
| Msa0025330 | Msa0138370 | 0.800556 | 1.363767e-48 | -8.615850e-47 |
| Msa0026910 | Msa0138370 | 0.808998 | 2.350651e-50 | -8.615850e-47 |
| Msa0028420 | Msa0138370 | 0.809624 | 1.725480e-50 | -8.615850e-47 |
| Msa0036140 | Msa0138370 | 0.812900 | 3.359298e-51 | -8.615850e-47 |
| Msa0044260 | Msa0138370 | 0.821917 | 3.127994e-53 | -8.615850e-47 |
| Msa0044330 | Msa0138370 | 0.806556 | 7.768853e-50 | -8.615850e-47 |
| Msa0045790 | Msa0138370 | 0.832969 | 6.976594e-56 | -8.615850e-47 |
| Msa0046160 | Msa0138370 | 0.832474 | 9.258591e-56 | -8.615850e-47 |
| Msa0051020 | Msa0138370 | 0.827434 | 1.567814e-54 | -8.615850e-47 |
| Msa0052680 | Msa0138370 | 0.810303 | 1.232375e-50 | -8.615850e-47 |
| Msa0054480 | Msa0138370 | 0.816881 | 4.400121e-52 | -8.615850e-47 |
| Msa0068680 | Msa0138370 | 0.822958 | 1.792762e-53 | -8.615850e-47 |
| Msa0074240 | Msa0138370 | 0.811266 | 7.631243e-51 | -8.615850e-47 |
| Msa0079380 | Msa0138370 | 0.801770 | 7.697331e-49 | -8.615850e-47 |
| Msa0084380 | Msa0138370 | 0.840984 | 6.255905e-58 | -8.615850e-47 |
| Msa0089630 | Msa0138370 | 0.823528 | 1.319225e-53 | -8.615850e-47 |
| Msa0089750 | Msa0138370 | 0.804289 | 2.319862e-49 | -8.615850e-47 |
| Msa0090360 | Msa0138370 | 0.809388 | 1.939821e-50 | -8.615850e-47 |
| Msa0095560 | Msa0138370 | 0.826032 | 3.388911e-54 | -8.615850e-47 |
| Msa0100160 | Msa0138370 | 0.801755 | 7.753548e-49 | -8.615850e-47 |
| Msa0101270 | Msa0138370 | 0.839490 | 1.535787e-57 | -8.615850e-47 |
| Msa0106620 | Msa0138370 | 0.805446 | 1.329859e-49 | -8.615850e-47 |
| Msa0106710 | Msa0138370 | 0.801766 | 7.712112e-49 | -8.615850e-47 |
| Msa0114060 | Msa0138370 | 0.831564 | 1.554530e-55 | -8.615850e-47 |
| Msa0121090 | Msa0138370 | 0.805555 | 1.261636e-49 | -8.615850e-47 |
| Msa0124060 | Msa0138370 | 0.829394 | 5.274361e-55 | -8.615850e-47 |
| Msa0131330 | Msa0138370 | 0.834166 | 3.506827e-56 | -8.615850e-47 |
| Msa0131770 | Msa0138370 | 0.824694 | 7.026406e-54 | -8.615850e-47 |
| Msa0138370 | Msa0145580 | 0.821999 | 2.994221e-53 | -8.615850e-47 |
| Msa0138370 | Msa0154440 | 0.800205 | 1.607443e-48 | -8.615850e-47 |
| Msa0138370 | Msa0157290 | 0.816518 | 5.306577e-52 | -8.615850e-47 |
| Msa0138370 | Msa0159930 | 0.813173 | 2.926752e-51 | -8.615850e-47 |
| Msa0138370 | Msa0160130 | 0.813951 | 1.973801e-51 | -8.615850e-47 |
| Msa0138370 | Msa0168500 | 0.838350 | 3.029451e-57 | -8.615850e-47 |
| Msa0138370 | Msa0173390 | 0.803071 | 4.151593e-49 | -8.615850e-47 |
| Msa0138370 | Msa0184040 | 0.800970 | 1.122605e-48 | -8.615850e-47 |
| Msa0138370 | Msa0188150 | 0.814865 | 1.239100e-51 | -8.615850e-47 |
| Msa0138370 | Msa0204840 | 0.803076 | 4.142235e-49 | -8.615850e-47 |
| Msa0138370 | Msa0211150 | 0.835528 | 1.592028e-56 | -8.615850e-47 |
| Msa0138370 | Msa0216240 | 0.804604 | 1.994414e-49 | -8.615850e-47 |
| Msa0138370 | Msa0218810 | 0.821479 | 3.950661e-53 | -8.615850e-47 |
| Msa0138370 | Msa0219590 | 0.805222 | 1.481799e-49 | -8.615850e-47 |
| Msa0138370 | Msa0220740 | 0.800026 | 1.747887e-48 | -8.615850e-47 |
| Msa0138370 | Msa0221470 | 0.816221 | 6.184870e-52 | -8.615850e-47 |
| Msa0138370 | Msa0224780 | 0.810537 | 1.097282e-50 | -8.615850e-47 |
| Msa0138370 | Msa0225100 | 0.812475 | 4.162173e-51 | -8.615850e-47 |
| Msa0138370 | Msa0243100 | 0.805710 | 1.170445e-49 | -8.615850e-47 |
| Msa0138370 | Msa0254790 | 0.843409 | 1.426100e-58 | -8.615850e-47 |
| Msa0138370 | Msa0258310 | 0.810147 | 1.331721e-50 | -8.615850e-47 |
| Msa0138370 | Msa0259430 | 0.807084 | 6.008201e-50 | -8.615850e-47 |
| Msa0138370 | Msa0259500 | 0.822911 | 1.838775e-53 | -8.615850e-47 |
| Msa0138370 | Msa0264780 | 0.815644 | 8.319274e-52 | -8.615850e-47 |
| Msa0138370 | Msa0266180 | 0.820059 | 8.377334e-53 | -8.615850e-47 |
| Msa0138370 | Msa0267370 | 0.822215 | 2.669055e-53 | -8.615850e-47 |
| Msa0138370 | Msa0278450 | 0.810002 | 1.430921e-50 | -8.615850e-47 |
| Msa0138370 | Msa0287650 | 0.812894 | 3.369526e-51 | -8.615850e-47 |
| Msa0138370 | Msa0287740 | 0.823131 | 1.633793e-53 | -8.615850e-47 |
| Msa0138370 | Msa0288100 | 0.814481 | 1.507533e-51 | -8.615850e-47 |
| Msa0138370 | Msa0294060 | 0.825616 | 4.253325e-54 | -8.615850e-47 |
| Msa0138370 | Msa0297790 | 0.807517 | 4.862806e-50 | -8.615850e-47 |
| Msa0138370 | Msa0300270 | 0.824393 | 8.270479e-54 | -8.615850e-47 |
| Msa0138370 | Msa0300320 | 0.823047 | 1.709305e-53 | -8.615850e-47 |
| Msa0138370 | Msa0305610 | 0.806126 | 9.569618e-50 | -8.615850e-47 |
| Msa0138370 | Msa0305700 | 0.834691 | 2.588825e-56 | -8.615850e-47 |
| Msa0138370 | Msa0317730 | 0.841468 | 4.666153e-58 | -8.615850e-47 |
| Msa0138370 | Msa0317970 | 0.804017 | 2.642944e-49 | -8.615850e-47 |
| Msa0138370 | Msa0328070 | 0.820692 | 5.998116e-53 | -8.615850e-47 |
| Msa0138370 | Msa0328080 | 0.808095 | 3.664660e-50 | -8.615850e-47 |
| Msa0138370 | Msa0330340 | 0.807187 | 5.713806e-50 | -8.615850e-47 |
| Msa0138370 | Msa0333030 | 0.808450 | 3.079590e-50 | -8.615850e-47 |
| Msa0138370 | Msa0337700 | 0.823732 | 1.182078e-53 | -8.615850e-47 |
| Msa0138370 | Msa0339500 | 0.810568 | 1.080414e-50 | -8.615850e-47 |
| Msa0138370 | Msa0341540 | 0.832297 | 1.024696e-55 | -8.615850e-47 |
| Msa0138370 | Msa0345970 | 0.844469 | 7.417283e-59 | -8.615850e-47 |
| Msa0138370 | Msa0348090 | 0.825465 | 4.618147e-54 | -8.615850e-47 |
| Msa0138370 | Msa0358890 | 0.808109 | 3.640383e-50 | -8.615850e-47 |
| Msa0138370 | Msa0359030 | 0.813789 | 2.142976e-51 | -8.615850e-47 |
| Msa0138370 | Msa0360210 | 0.815694 | 8.106968e-52 | -8.615850e-47 |
| Msa0138370 | Msa0363070 | 0.810319 | 1.222888e-50 | -8.615850e-47 |
| Msa0138370 | Msa0363790 | 0.806410 | 8.340289e-50 | -8.615850e-47 |
| Msa0138370 | Msa0364340 | 0.809255 | 2.071542e-50 | -8.615850e-47 |
| Msa0138370 | Msa0365100 | 0.801396 | 9.185805e-49 | -8.615850e-47 |
| Msa0138370 | Msa0367870 | 0.815917 | 7.231223e-52 | -8.615850e-47 |
| Msa0138370 | Msa0372810 | 0.810265 | 1.256272e-50 | -8.615850e-47 |
| Msa0138370 | Msa0376350 | 0.839096 | 1.943905e-57 | -8.615850e-47 |
| Msa0138370 | Msa0378720 | 0.812002 | 5.277261e-51 | -8.615850e-47 |
| Msa0138370 | Msa0388960 | 0.811248 | 7.696978e-51 | -8.615850e-47 |
| Msa0138370 | Msa0392510 | 0.802167 | 6.378393e-49 | -8.615850e-47 |
| Msa0138370 | Msa0395790 | 0.808344 | 3.244018e-50 | -8.615850e-47 |
| Msa0138370 | Msa0403970 | 0.801160 | 1.026430e-48 | -8.615850e-47 |
| Msa0138370 | Msa0406770 | 0.815185 | 1.052187e-51 | -8.615850e-47 |
| Msa0138370 | Msa0410650 | 0.823236 | 1.543741e-53 | -8.615850e-47 |
| Msa0138370 | Msa0417270 | 0.826577 | 2.512981e-54 | -8.615850e-47 |
| Msa0138370 | Msa0422280 | 0.801215 | 9.999924e-49 | -8.615850e-47 |
| Msa0138370 | Msa0424790 | 0.826527 | 2.583482e-54 | -8.615850e-47 |
| Msa0138370 | Msa0427100 | 0.805089 | 1.579183e-49 | -8.615850e-47 |
| Msa0138370 | Msa0427120 | 0.812017 | 5.239510e-51 | -8.615850e-47 |
| Msa0138370 | Msa0440750 | 0.835131 | 2.005335e-56 | -8.615850e-47 |
| Msa0138370 | Msa0452710 | 0.815360 | 9.619953e-52 | -8.615850e-47 |
| Msa0138370 | Msa0464680 | 0.850817 | 1.328769e-60 | -8.615850e-47 |
| Msa0138370 | Msa0467490 | 0.827831 | 1.259108e-54 | -8.615850e-47 |
| Msa0138370 | Msa0471670 | 0.819471 | 1.141509e-52 | -8.615850e-47 |
| Msa0138370 | Msa0479170 | 0.842191 | 3.006202e-58 | -8.615850e-47 |
| Msa0138370 | Msa0481530 | 0.830977 | 2.167412e-55 | -8.615850e-47 |
| Msa0138370 | Msa0488560 | 0.819819 | 9.504509e-53 | -8.615850e-47 |
| Msa0138370 | Msa0493250 | 0.805106 | 1.566929e-49 | -8.615850e-47 |
| Msa0138370 | Msa0498060 | 0.825602 | 4.285454e-54 | -8.615850e-47 |
| Msa0138370 | Msa0504210 | 0.812582 | 3.942735e-51 | -8.615850e-47 |
| Msa0138370 | Msa0507680 | 0.829647 | 4.578066e-55 | -8.615850e-47 |
| Msa0138370 | Msa0509610 | 0.805097 | 1.573600e-49 | -8.615850e-47 |
| Msa0138370 | Msa0516170 | 0.839547 | 1.484673e-57 | -8.615850e-47 |
| Msa0138370 | Msa0517110 | 0.801823 | 7.505935e-49 | -8.615850e-47 |
| Msa0138370 | Msa0518380 | 0.804059 | 2.590852e-49 | -8.615850e-47 |
| Msa0138370 | Msa0529890 | 0.824753 | 6.803379e-54 | -8.615850e-47 |
| Msa0138370 | Msa0532350 | 0.802553 | 5.311739e-49 | -8.615850e-47 |
| Msa0138370 | Msa0538910 | 0.804032 | 2.624127e-49 | -8.615850e-47 |
| Msa0138370 | Msa0547320 | 0.802672 | 5.020754e-49 | -8.615850e-47 |
| Msa0138370 | Msa0557070 | 0.810257 | 1.261173e-50 | -8.615850e-47 |
| Msa0138370 | Msa0569200 | 0.833908 | 4.069354e-56 | -8.615850e-47 |
| Msa0138370 | Msa0572840 | 0.808681 | 2.748749e-50 | -8.615850e-47 |
| Msa0138370 | Msa0574390 | 0.822952 | 1.798833e-53 | -8.615850e-47 |
| Msa0138370 | Msa0580370 | 0.800353 | 1.499700e-48 | -8.615850e-47 |
| Msa0138370 | Msa0585560 | 0.835789 | 1.367706e-56 | -8.615850e-47 |
| Msa0138370 | Msa0590830 | 0.822438 | 2.368530e-53 | -8.615850e-47 |
| Msa0138370 | Msa0594660 | 0.809216 | 2.111594e-50 | -8.615850e-47 |
| Msa0138370 | Msa0597790 | 0.811359 | 7.283378e-51 | -8.615850e-47 |
| Msa0138370 | Msa0598160 | 0.810548 | 1.091338e-50 | -8.615850e-47 |
| Msa0138370 | Msa0602460 | 0.806480 | 8.058425e-50 | -8.615850e-47 |
| Msa0138370 | Msa0613440 | 0.812578 | 3.951115e-51 | -8.615850e-47 |
| Msa0138370 | Msa0625720 | 0.821771 | 3.381342e-53 | -8.615850e-47 |
| Msa0138370 | Msa0626090 | 0.811202 | 7.878272e-51 | -8.615850e-47 |
| Msa0138370 | Msa0626450 | 0.808855 | 2.523007e-50 | -8.615850e-47 |
| Msa0138370 | Msa0626490 | 0.807469 | 4.978608e-50 | -8.615850e-47 |
| Msa0138370 | Msa0626510 | 0.804658 | 1.943179e-49 | -8.615850e-47 |
| Msa0138370 | Msa0627450 | 0.820134 | 8.051276e-53 | -8.615850e-47 |
| Msa0138370 | Msa0634730 | 0.809015 | 2.331235e-50 | -8.615850e-47 |
| Msa0138370 | Msa0637900 | 0.803337 | 3.658170e-49 | -8.615850e-47 |
| Msa0138370 | Msa0661650 | 0.807455 | 5.012159e-50 | -8.615850e-47 |
| Msa0138370 | Msa0662340 | 0.810027 | 1.413322e-50 | -8.615850e-47 |
| Msa0138370 | Msa0663390 | 0.845022 | 5.262556e-59 | -8.615850e-47 |
| Msa0138370 | Msa0664600 | 0.806945 | 6.428639e-50 | -8.615850e-47 |
| Msa0138370 | Msa0667050 | 0.819054 | 1.420502e-52 | -8.615850e-47 |
| Msa0138370 | Msa0667770 | 0.801068 | 1.071873e-48 | -8.615850e-47 |
| Msa0138370 | Msa0667790 | 0.800737 | 1.252611e-48 | -8.615850e-47 |
| Msa0138370 | Msa0677410 | 0.820598 | 6.301339e-53 | -8.615850e-47 |
| Msa0138370 | Msa0682330 | 0.801810 | 7.554980e-49 | -8.615850e-47 |
| Msa0138370 | Msa0683510 | 0.819070 | 1.408680e-52 | -8.615850e-47 |
| Msa0138370 | Msa0696390 | 0.803786 | 2.952181e-49 | -8.615850e-47 |
| Msa0138370 | Msa0697030 | 0.816148 | 6.421200e-52 | -8.615850e-47 |
| Msa0138370 | Msa0697160 | 0.812317 | 4.505836e-51 | -8.615850e-47 |
| Msa0138370 | Msa0707250 | 0.812935 | 3.299614e-51 | -8.615850e-47 |
| Msa0138370 | Msa0724210 | 0.820157 | 7.955911e-53 | -8.615850e-47 |
| Msa0138370 | Msa0731940 | 0.850355 | 1.792155e-60 | -8.615850e-47 |
| Msa0138370 | Msa0733390 | 0.812016 | 5.241195e-51 | -8.615850e-47 |
| Msa0138370 | Msa0740510 | 0.808835 | 2.547352e-50 | -8.615850e-47 |
| Msa0138370 | Msa0740520 | 0.800119 | 1.673246e-48 | -8.615850e-47 |
| Msa0138370 | Msa0741840 | 0.800713 | 1.266716e-48 | -8.615850e-47 |
| Msa0138370 | Msa0744040 | 0.804043 | 2.610151e-49 | -8.615850e-47 |
| Msa0138370 | Msa0750240 | 0.808944 | 2.414713e-50 | -8.615850e-47 |
| Msa0138370 | Msa0760130 | 0.849403 | 3.308005e-60 | -8.615850e-47 |
| Msa0138370 | Msa0760180 | 0.809733 | 1.635009e-50 | -8.615850e-47 |
| Msa0138370 | Msa0760250 | 0.810962 | 8.879040e-51 | -8.615850e-47 |
| Msa0138370 | Msa0762970 | 0.820719 | 5.913543e-53 | -8.615850e-47 |
| Msa0138370 | Msa0764130 | -0.813454 | 2.538629e-51 | -8.615850e-47 |
| Msa0138370 | Msa0794730 | 0.817103 | 3.923428e-52 | -8.615850e-47 |
| Msa0138370 | Msa0796700 | 0.823319 | 1.476612e-53 | -8.615850e-47 |
| Msa0138370 | Msa0797250 | 0.806489 | 8.024974e-50 | -8.615850e-47 |
| Msa0138370 | Msa0810220 | 0.843754 | 1.153664e-58 | -8.615850e-47 |
| Msa0138370 | Msa0816710 | 0.807811 | 4.211053e-50 | -8.615850e-47 |
| Msa0138370 | Msa0818060 | 0.812059 | 5.127896e-51 | -8.615850e-47 |
| Msa0138370 | Msa0820770 | 0.805269 | 1.448414e-49 | -8.615850e-47 |
| Msa0138370 | Msa0820850 | 0.815579 | 8.601805e-52 | -8.615850e-47 |
| Msa0138370 | Msa0822870 | 0.806044 | 9.955708e-50 | -8.615850e-47 |
| Msa0138370 | Msa0828560 | 0.851892 | 6.598949e-61 | -8.615850e-47 |
| Msa0138370 | Msa0830510 | 0.800840 | 1.193036e-48 | -8.615850e-47 |
| Msa0138370 | Msa0832340 | 0.820802 | 5.659208e-53 | -8.615850e-47 |
| Msa0138370 | Msa0834880 | 0.808787 | 2.608787e-50 | -8.615850e-47 |
| Msa0138370 | Msa0838580 | 0.800503 | 1.398231e-48 | -8.615850e-47 |
| Msa0138370 | Msa0842790 | 0.809442 | 1.888613e-50 | -8.615850e-47 |
| Msa0138370 | Msa0843780 | -0.834655 | 2.643464e-56 | -8.615850e-47 |
| Msa0138370 | Msa0844490 | 0.811579 | 6.525414e-51 | -8.615850e-47 |
| Msa0138370 | Msa0861090 | 0.806801 | 6.896198e-50 | -8.615850e-47 |
| Msa0138370 | Msa0861130 | 0.818708 | 1.702378e-52 | -8.615850e-47 |
| Msa0138370 | Msa0861510 | 0.824835 | 6.507527e-54 | -8.615850e-47 |
| Msa0138370 | Msa0861600 | 0.830256 | 3.253564e-55 | -8.615850e-47 |
| Msa0138370 | Msa0861850 | 0.807926 | 3.980443e-50 | -8.615850e-47 |
| Msa0138370 | Msa0861870 | 0.805178 | 1.513044e-49 | -8.615850e-47 |
| Msa0138370 | Msa0866520 | 0.835567 | 1.556980e-56 | -8.615850e-47 |
| Msa0138370 | Msa0871270 | 0.804517 | 2.080026e-49 | -8.615850e-47 |
| Msa0138370 | Msa0875290 | 0.810655 | 1.034522e-50 | -8.615850e-47 |
| Msa0138370 | Msa0880140 | 0.811979 | 5.339753e-51 | -8.615850e-47 |
| Msa0138370 | Msa0880950 | 0.824340 | 8.511501e-54 | -8.615850e-47 |
| Msa0138370 | Msa0892080 | 0.801274 | 9.726155e-49 | -8.615850e-47 |
| Msa0138370 | Msa0898750 | 0.841154 | 5.643313e-58 | -8.615850e-47 |
| Msa0138370 | Msa0906690 | 0.801039 | 1.086592e-48 | -8.615850e-47 |
| Msa0138370 | Msa0926890 | 0.812238 | 4.687861e-51 | -8.615850e-47 |
| Msa0138370 | Msa0928130 | 0.833632 | 4.769125e-56 | -8.615850e-47 |
| Msa0138370 | Msa0936300 | 0.802351 | 5.845271e-49 | -8.615850e-47 |
| Msa0138370 | Msa0941190 | 0.806701 | 7.238632e-50 | -8.615850e-47 |
| Msa0138370 | Msa0963270 | 0.818103 | 2.334187e-52 | -8.615850e-47 |
| Msa0138370 | Msa0964310 | 0.817967 | 2.505631e-52 | -8.615850e-47 |
| Msa0138370 | Msa0965610 | 0.805344 | 1.396597e-49 | -8.615850e-47 |
| Msa0138370 | Msa0967380 | 0.803522 | 3.348836e-49 | -8.615850e-47 |
| Msa0138370 | Msa0967870 | 0.804392 | 2.208733e-49 | -8.615850e-47 |
| Msa0138370 | Msa0969450 | 0.819580 | 1.078089e-52 | -8.615850e-47 |
| Msa0138370 | Msa0969520 | 0.848477 | 5.978388e-60 | -8.615850e-47 |
| Msa0138370 | Msa0969810 | 0.804538 | 2.058522e-49 | -8.615850e-47 |
| Msa0138370 | Msa0972100 | 0.808154 | 3.561212e-50 | -8.615850e-47 |
| Msa0138370 | Msa0974070 | 0.801425 | 9.061301e-49 | -8.615850e-47 |
| Msa0138370 | Msa0980880 | 0.802273 | 6.066087e-49 | -8.615850e-47 |
| Msa0138370 | Msa0997370 | 0.806437 | 8.228733e-50 | -8.615850e-47 |
| Msa0138370 | Msa1002850 | 0.802624 | 5.136617e-49 | -8.615850e-47 |
| Msa0138370 | Msa1004840 | 0.820971 | 5.172433e-53 | -8.615850e-47 |
| Msa0138370 | Msa1014540 | 0.814129 | 1.803029e-51 | -8.615850e-47 |
| Msa0138370 | Msa1019000 | 0.808389 | 3.173059e-50 | -8.615850e-47 |
| Msa0138370 | Msa1019430 | 0.811835 | 5.739157e-51 | -8.615850e-47 |
| Msa0138370 | Msa1019470 | 0.821071 | 4.905599e-53 | -8.615850e-47 |
| Msa0138370 | Msa1023190 | 0.801131 | 1.040621e-48 | -8.615850e-47 |
| Msa0138370 | Msa1028970 | 0.801762 | 7.725900e-49 | -8.615850e-47 |
| Msa0138370 | Msa1029310 | 0.822711 | 2.046796e-53 | -8.615850e-47 |
| Msa0138370 | Msa1031930 | 0.805435 | 1.336556e-49 | -8.615850e-47 |
| Msa0138370 | Msa1035480 | 0.818783 | 1.636820e-52 | -8.615850e-47 |
| Msa0138370 | Msa1035960 | 0.821541 | 3.822305e-53 | -8.615850e-47 |
| Msa0138370 | Msa1036610 | 0.807305 | 5.394515e-50 | -8.615850e-47 |
| Msa0138370 | Msa1036710 | -0.808599 | 2.861380e-50 | -8.615850e-47 |
| Msa0138370 | Msa1041670 | 0.802745 | 4.849421e-49 | -8.615850e-47 |
| Msa0138370 | Msa1043370 | 0.810393 | 1.178878e-50 | -8.615850e-47 |
| Msa0138370 | Msa1048160 | 0.800484 | 1.410750e-48 | -8.615850e-47 |
| Msa0138370 | Msa1054990 | 0.811218 | 7.814098e-51 | -8.615850e-47 |
| Msa0138370 | Msa1075540 | 0.828037 | 1.122948e-54 | -8.615850e-47 |
| Msa0138370 | Msa1075650 | 0.814603 | 1.416301e-51 | -8.615850e-47 |
| Msa0138370 | Msa1076700 | 0.816202 | 6.245318e-52 | -8.615850e-47 |
| Msa0138370 | Msa1078170 | 0.809902 | 1.503730e-50 | -8.615850e-47 |
| Msa0138370 | Msa1079590 | 0.805929 | 1.052967e-49 | -8.615850e-47 |
| Msa0138370 | Msa1080960 | 0.800450 | 1.433442e-48 | -8.615850e-47 |
| Msa0138370 | Msa1081330 | 0.813411 | 2.594262e-51 | -8.615850e-47 |
| Msa0138370 | Msa1082500 | 0.815054 | 1.125017e-51 | -8.615850e-47 |
| Msa0138370 | Msa1083840 | 0.801396 | 9.185788e-49 | -8.615850e-47 |
| Msa0138370 | Msa1085200 | 0.830561 | 2.740454e-55 | -8.615850e-47 |
| Msa0138370 | Msa1100050 | 0.815656 | 8.265688e-52 | -8.615850e-47 |
| Msa0138370 | Msa1101090 | 0.857286 | 1.810423e-62 | -8.615850e-47 |
| Msa0138370 | Msa1115100 | 0.823001 | 1.751623e-53 | -8.615850e-47 |
| Msa0138370 | Msa1121480 | 0.803399 | 3.551557e-49 | -8.615850e-47 |
| Msa0138370 | Msa1121490 | 0.825041 | 5.819740e-54 | -8.615850e-47 |
| Msa0138370 | Msa1122520 | 0.816898 | 4.361802e-52 | -8.615850e-47 |
| Msa0138370 | Msa1123380 | 0.822332 | 2.506896e-53 | -8.615850e-47 |
| Msa0138370 | Msa1132840 | 0.805026 | 1.628178e-49 | -8.615850e-47 |
| Msa0138370 | Msa1135470 | 0.826765 | 2.266700e-54 | -8.615850e-47 |
| Msa0138370 | Msa1137570 | 0.826206 | 3.081135e-54 | -8.615850e-47 |
| Msa0138370 | Msa1139890 | 0.810097 | 1.365412e-50 | -8.615850e-47 |
| Msa0138370 | Msa1140210 | 0.805345 | 1.395821e-49 | -8.615850e-47 |
| Msa0138370 | Msa1142020 | 0.805239 | 1.469712e-49 | -8.615850e-47 |
| Msa0138370 | Msa1145810 | 0.821465 | 3.979628e-53 | -8.615850e-47 |
| Msa0138370 | Msa1154280 | 0.802551 | 5.317524e-49 | -8.615850e-47 |
| Msa0138370 | Msa1158310 | 0.835649 | 1.484100e-56 | -8.615850e-47 |
| Msa0138370 | Msa1162780 | 0.833530 | 5.058161e-56 | -8.615850e-47 |
| Msa0138370 | Msa1166560 | 0.803128 | 4.041581e-49 | -8.615850e-47 |
| Msa0138370 | Msa1170350 | 0.840008 | 1.126150e-57 | -8.615850e-47 |
| Msa0138370 | Msa1173100 | 0.808839 | 2.542809e-50 | -8.615850e-47 |
| Msa0138370 | Msa1186020 | 0.820248 | 7.582733e-53 | -8.615850e-47 |
| Msa0138370 | Msa1189070 | 0.846135 | 2.626794e-59 | -8.615850e-47 |
| Msa0138370 | Msa1199570 | 0.838204 | 3.304358e-57 | -8.615850e-47 |
| Msa0138370 | Msa1203710 | 0.803569 | 3.275078e-49 | -8.615850e-47 |
| Msa0138370 | Msa1204530 | 0.808845 | 2.535561e-50 | -8.615850e-47 |
| Msa0138370 | Msa1204630 | 0.801127 | 1.042404e-48 | -8.615850e-47 |
| Msa0138370 | Msa1209460 | 0.815275 | 1.004903e-51 | -8.615850e-47 |
| Msa0138370 | Msa1219010 | 0.812307 | 4.529190e-51 | -8.615850e-47 |
| Msa0138370 | Msa1228200 | 0.813230 | 2.844073e-51 | -8.615850e-47 |
| Msa0138370 | Msa1232740 | 0.805092 | 1.577109e-49 | -8.615850e-47 |
| Msa0138370 | Msa1239920 | 0.801784 | 7.648432e-49 | -8.615850e-47 |
| Msa0138370 | Msa1242670 | 0.807184 | 5.722527e-50 | -8.615850e-47 |
| Msa0138370 | Msa1243490 | 0.822872 | 1.877337e-53 | -8.615850e-47 |
| Msa0138370 | Msa1257300 | 0.809449 | 1.882053e-50 | -8.615850e-47 |
| Msa0138370 | Msa1276660 | 0.813298 | 2.747408e-51 | -8.615850e-47 |
| Msa0138370 | Msa1284550 | 0.849825 | 2.522060e-60 | -8.615850e-47 |
| Msa0138370 | Msa1284680 | 0.805811 | 1.114593e-49 | -8.615850e-47 |
| Msa0138370 | Msa1286800 | 0.813098 | 3.039892e-51 | -8.615850e-47 |
| Msa0138370 | Msa1297230 | 0.828096 | 1.087185e-54 | -8.615850e-47 |
| Msa0138370 | Msa1297290 | 0.801397 | 9.180332e-49 | -8.615850e-47 |
| Msa0138370 | Msa1298370 | 0.802856 | 4.599404e-49 | -8.615850e-47 |
| Msa0138370 | Msa1306850 | 0.828061 | 1.108087e-54 | -8.615850e-47 |
| Msa0138370 | Msa1308870 | 0.802203 | 6.270939e-49 | -8.615850e-47 |
| Msa0138370 | Msa1313150 | 0.803972 | 2.700625e-49 | -8.615850e-47 |
| Msa0138370 | Msa1313320 | 0.812311 | 4.519686e-51 | -8.615850e-47 |
| Msa0138370 | Msa1314650 | 0.812205 | 4.767506e-51 | -8.615850e-47 |
| Msa0138370 | Msa1328710 | 0.837821 | 4.145642e-57 | -8.615850e-47 |
| Msa0138370 | Msa1330170 | 0.811772 | 5.921809e-51 | -8.615850e-47 |
| Msa0138370 | Msa1331000 | 0.826269 | 2.976655e-54 | -8.615850e-47 |
| Msa0138370 | Msa1332760 | 0.811017 | 8.638596e-51 | -8.615850e-47 |
| Msa0138370 | Msa1333480 | 0.849720 | 2.698279e-60 | -8.615850e-47 |
| Msa0138370 | Msa1343430 | 0.818219 | 2.197718e-52 | -8.615850e-47 |
| Msa0138370 | Msa1345810 | 0.804010 | 2.652664e-49 | -8.615850e-47 |
| Msa0138370 | Msa1346370 | 0.802806 | 4.709360e-49 | -8.615850e-47 |
| Msa0138370 | Msa1353470 | 0.816073 | 6.674480e-52 | -8.615850e-47 |
| Msa0138370 | Msa1353980 | 0.826974 | 2.020340e-54 | -8.615850e-47 |
| Msa0138370 | Msa1355450 | 0.819022 | 1.444684e-52 | -8.615850e-47 |
| Msa0138370 | Msa1359040 | 0.818435 | 1.963665e-52 | -8.615850e-47 |
| Msa0138370 | Msa1360440 | 0.836289 | 1.020946e-56 | -8.615850e-47 |
| Msa0138370 | Msa1360980 | 0.812430 | 4.256544e-51 | -8.615850e-47 |
| Msa0138370 | Msa1368430 | 0.829519 | 4.920828e-55 | -8.615850e-47 |
| Msa0138370 | Msa1372760 | 0.801616 | 8.278117e-49 | -8.615850e-47 |
| Msa0138370 | Msa1373030 | 0.805018 | 1.634382e-49 | -8.615850e-47 |
| Msa0138370 | Msa1374470 | 0.800855 | 1.184796e-48 | -8.615850e-47 |
| Msa0138370 | Msa1375560 | 0.840230 | 9.855298e-58 | -8.615850e-47 |
| Msa0138370 | Msa1375840 | 0.805138 | 1.542392e-49 | -8.615850e-47 |
| Msa0138370 | Msa1383230 | 0.825567 | 4.369210e-54 | -8.615850e-47 |
| Msa0138370 | Msa1383530 | 0.812057 | 5.135304e-51 | -8.615850e-47 |
| Msa0138370 | Msa1385000 | 0.803329 | 3.671380e-49 | -8.615850e-47 |
| Msa0138370 | Msa1394380 | 0.807229 | 5.598387e-50 | -8.615850e-47 |
| Msa0138370 | Msa1409700 | 0.822328 | 2.512147e-53 | -8.615850e-47 |
| Msa0138370 | Msa1412640 | 0.811819 | 5.783725e-51 | -8.615850e-47 |
| Msa0138370 | Msa1423350 | 0.812347 | 4.437015e-51 | -8.615850e-47 |
| Msa0138370 | Msa1425880 | 0.801291 | 9.649995e-49 | -8.615850e-47 |
| Msa0138370 | Msa1436480 | 0.830435 | 2.941988e-55 | -8.615850e-47 |
| Msa0138370 | Msa1448560 | 0.807033 | 6.158332e-50 | -8.615850e-47 |
| Msa0138370 | Msa1448640 | 0.812667 | 3.778119e-51 | -8.615850e-47 |
| Msa0138370 | Msa1451160 | 0.816139 | 6.450479e-52 | -8.615850e-47 |
| Msa0138370 | Msa1454620 | 0.807695 | 4.458986e-50 | -8.615850e-47 |
| Msa0138370 | Msa1460020 | 0.802289 | 6.021442e-49 | -8.615850e-47 |
| Msa0138370 | Msa1461300 | 0.811579 | 6.522532e-51 | -8.615850e-47 |
| Msa0138370 | Msa1463900 | 0.818249 | 2.163215e-52 | -8.615850e-47 |
| Msa0138370 | Msa1464810 | 0.835660 | 1.474131e-56 | -8.615850e-47 |
| Msa0138370 | Msa1466540 | 0.836529 | 8.870261e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138370 | MtrunA17_Chr2g0291491 | 97.619 | 126 | 3 | 0 | 2 | 127 | 450 | 575 | 2.34e-82 | 251 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138370 | AT3G54630.1 | 44.037 | 109 | 61 | 0 | 1 | 109 | 454 | 562 | 2.99e-27 | 105 |
Find 29 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAATACACGAGCAAAATA+TGG | 0.313368 | 1_3:-71236212 | None:intergenic |
| CACTCTTTGTTGGAGTTAGA+AGG | 0.338244 | 1_3:+71235020 | Msa0138370:five_prime_UTR |
| TGATCATGATGTGGGCATTA+TGG | 0.365375 | 1_3:+71235224 | Msa0138370:CDS |
| GTTTATGTTACACTCTTTGT+TGG | 0.374247 | 1_3:+71235010 | Msa0138370:five_prime_UTR |
| GCATCTTTACATCAAATTGA+TGG | 0.380197 | 1_3:-71236241 | None:intergenic |
| GTCCGACATCTTCTTAGCTT+CGG | 0.401875 | 1_3:-71235187 | None:intergenic |
| GGCATCTGAATTGAAGTTGC+AGG | 0.406818 | 1_3:+71235794 | Msa0138370:intron |
| AATGTGGTTAATTGAAAGTA+GGG | 0.409020 | 1_3:+71236119 | Msa0138370:three_prime_UTR |
| TCACTAGCTGGAAACTCAAA+TGG | 0.437352 | 1_3:+71235119 | Msa0138370:exon |
| GAATGTGGTTAATTGAAAGT+AGG | 0.443207 | 1_3:+71236118 | Msa0138370:three_prime_UTR |
| AGAGGCAGCTGAGGTTCTAA+AGG | 0.469279 | 1_3:+71235251 | Msa0138370:CDS |
| AACAAGCAGTAGAAAAGAAA+AGG | 0.477440 | 1_3:-71235089 | None:intergenic |
| TTGTTGATTTATTCACTAGC+TGG | 0.483818 | 1_3:+71235107 | Msa0138370:five_prime_UTR |
| AAAATATAGTTATATATTGG+AGG | 0.526340 | 1_3:+71235992 | Msa0138370:CDS |
| CTCAAAGTATAAAGAACATG+TGG | 0.527765 | 1_3:+71235887 | Msa0138370:CDS |
| CCACATCATGATCAGCTAGC+TGG | 0.533202 | 1_3:-71235215 | None:intergenic |
| ACTCTTTGTTGGAGTTAGAA+GGG | 0.534990 | 1_3:+71235021 | Msa0138370:five_prime_UTR |
| GAGCAAAATATGGAGCTGAA+TGG | 0.581103 | 1_3:-71236202 | None:intergenic |
| CCAGCTAGCTGATCATGATG+TGG | 0.595217 | 1_3:+71235215 | Msa0138370:CDS |
| GTCAAACAACAGTCTTTACA+AGG | 0.603205 | 1_3:-71235067 | None:intergenic |
| GAAGAAATTCAAATGCATGC+CGG | 0.605310 | 1_3:+71235837 | Msa0138370:CDS |
| AAAGTTTCAGAGATTAGAAG+CGG | 0.616241 | 1_3:+71235915 | Msa0138370:CDS |
| AAGTTTCAGAGATTAGAAGC+GGG | 0.618896 | 1_3:+71235916 | Msa0138370:CDS |
| CATGATAAAGAAAGAAACAC+AGG | 0.630583 | 1_3:+71235143 | Msa0138370:CDS |
| TCAAAGTATAAAGAACATGT+GGG | 0.633300 | 1_3:+71235888 | Msa0138370:CDS |
| TATGGAAAGAGAGGCAGCTG+AGG | 0.635705 | 1_3:+71235242 | Msa0138370:CDS |
| CAGCTAGCTGATCATGATGT+GGG | 0.635721 | 1_3:+71235216 | Msa0138370:CDS |
| TGTGGGCATTATGGAAAGAG+AGG | 0.640887 | 1_3:+71235233 | Msa0138370:CDS |
| TGCCGAAGCTAAGAAGATGT+CGG | 0.664082 | 1_3:+71235185 | Msa0138370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATAACTATATTTTTCT+GGG | - | chr1_3:71235989-71236008 | None:intergenic | 10.0% |
| !!! | AATATATAACTATATTTTTC+TGG | - | chr1_3:71235990-71236009 | None:intergenic | 10.0% |
| !! | AGAAAAATATAGTTATATAT+TGG | + | chr1_3:71235989-71236008 | Msa0138370:CDS | 10.0% |
| !!! | ATATATAACTATATTTTTCT+GGG | - | chr1_3:71235989-71236008 | None:intergenic | 10.0% |
| !!! | AATATATAACTATATTTTTC+TGG | - | chr1_3:71235990-71236009 | None:intergenic | 10.0% |
| !! | AGAAAAATATAGTTATATAT+TGG | + | chr1_3:71235989-71236008 | Msa0138370:CDS | 10.0% |
| !! | TAAAGATAAAAATAAGAATC+CGG | - | chr1_3:71235283-71235302 | None:intergenic | 15.0% |
| !!! | TTGTGTTTCAATTATTTTTT+TGG | + | chr1_3:71235522-71235541 | Msa0138370:intron | 15.0% |
| !! | AAAATATAGTTATATATTGG+AGG | + | chr1_3:71235992-71236011 | Msa0138370:CDS | 15.0% |
| !! | TAAAGATAAAAATAAGAATC+CGG | - | chr1_3:71235283-71235302 | None:intergenic | 15.0% |
| !!! | TTGTGTTTCAATTATTTTTT+TGG | + | chr1_3:71235522-71235541 | Msa0138370:intron | 15.0% |
| !! | AAAATATAGTTATATATTGG+AGG | + | chr1_3:71235992-71236011 | Msa0138370:CDS | 15.0% |
| !! | AAAAAATCCAAAAACTAAAC+TGG | - | chr1_3:71235473-71235492 | None:intergenic | 20.0% |
| !! | TAGTAAATGATAATCAAACT+GGG | + | chr1_3:71235666-71235685 | Msa0138370:intron | 20.0% |
| !!! | AACTTTTTATATTGTTGTCA+AGG | + | chr1_3:71235773-71235792 | Msa0138370:intron | 20.0% |
| !! | AATCAACTTAAAAAGTTTAC+CGG | - | chr1_3:71235859-71235878 | None:intergenic | 20.0% |
| !!! | ATTCAATTCTCTGAATTTTA+CGG | - | chr1_3:71236022-71236041 | None:intergenic | 20.0% |
| !!! | CTTTTAAATATGAATGAATG+TGG | + | chr1_3:71236103-71236122 | Msa0138370:three_prime_UTR | 20.0% |
| !! | AAAAAATCCAAAAACTAAAC+TGG | - | chr1_3:71235473-71235492 | None:intergenic | 20.0% |
| !! | TAGTAAATGATAATCAAACT+GGG | + | chr1_3:71235666-71235685 | Msa0138370:intron | 20.0% |
| !!! | AACTTTTTATATTGTTGTCA+AGG | + | chr1_3:71235773-71235792 | Msa0138370:intron | 20.0% |
| !! | AATCAACTTAAAAAGTTTAC+CGG | - | chr1_3:71235859-71235878 | None:intergenic | 20.0% |
| !!! | ATTCAATTCTCTGAATTTTA+CGG | - | chr1_3:71236022-71236041 | None:intergenic | 20.0% |
| !!! | CTTTTAAATATGAATGAATG+TGG | + | chr1_3:71236103-71236122 | Msa0138370:three_prime_UTR | 20.0% |
| ! | AGTTGTATTTGAACCAAATT+GGG | + | chr1_3:71235314-71235333 | Msa0138370:intron | 25.0% |
| ! | TTATTGTGTTTCAATGAACT+TGG | + | chr1_3:71235401-71235420 | Msa0138370:intron | 25.0% |
| ! | AATTGAAACACAAGATCAAT+GGG | - | chr1_3:71235515-71235534 | None:intergenic | 25.0% |
| ! | TAATTGAAACACAAGATCAA+TGG | - | chr1_3:71235516-71235535 | None:intergenic | 25.0% |
| ! | CAGTTTGATTATCATTTACT+AGG | - | chr1_3:71235667-71235686 | None:intergenic | 25.0% |
| ! | CTAGTAAATGATAATCAAAC+TGG | + | chr1_3:71235665-71235684 | Msa0138370:intron | 25.0% |
| ! | ACAATGTTGTCACATAAATT+GGG | - | chr1_3:71235745-71235764 | None:intergenic | 25.0% |
| ! | TACAATGTTGTCACATAAAT+TGG | - | chr1_3:71235746-71235765 | None:intergenic | 25.0% |
| ! | TCAAAGTATAAAGAACATGT+GGG | + | chr1_3:71235888-71235907 | Msa0138370:CDS | 25.0% |
| ! | AATGTGGTTAATTGAAAGTA+GGG | + | chr1_3:71236119-71236138 | Msa0138370:three_prime_UTR | 25.0% |
| !!! | AAAGTAGGGTTTTTAGTATT+GGG | + | chr1_3:71236133-71236152 | Msa0138370:three_prime_UTR | 25.0% |
| ! | AGTTGTATTTGAACCAAATT+GGG | + | chr1_3:71235314-71235333 | Msa0138370:intron | 25.0% |
| ! | TTATTGTGTTTCAATGAACT+TGG | + | chr1_3:71235401-71235420 | Msa0138370:intron | 25.0% |
| ! | AATTGAAACACAAGATCAAT+GGG | - | chr1_3:71235515-71235534 | None:intergenic | 25.0% |
| ! | TAATTGAAACACAAGATCAA+TGG | - | chr1_3:71235516-71235535 | None:intergenic | 25.0% |
| ! | CAGTTTGATTATCATTTACT+AGG | - | chr1_3:71235667-71235686 | None:intergenic | 25.0% |
| ! | CTAGTAAATGATAATCAAAC+TGG | + | chr1_3:71235665-71235684 | Msa0138370:intron | 25.0% |
| ! | ACAATGTTGTCACATAAATT+GGG | - | chr1_3:71235745-71235764 | None:intergenic | 25.0% |
| ! | TACAATGTTGTCACATAAAT+TGG | - | chr1_3:71235746-71235765 | None:intergenic | 25.0% |
| ! | TCAAAGTATAAAGAACATGT+GGG | + | chr1_3:71235888-71235907 | Msa0138370:CDS | 25.0% |
| ! | AATGTGGTTAATTGAAAGTA+GGG | + | chr1_3:71236119-71236138 | Msa0138370:three_prime_UTR | 25.0% |
| !!! | AAAGTAGGGTTTTTAGTATT+GGG | + | chr1_3:71236133-71236152 | Msa0138370:three_prime_UTR | 25.0% |
| GTTTATGTTACACTCTTTGT+TGG | + | chr1_3:71235010-71235029 | Msa0138370:five_prime_UTR | 30.0% | |
| AACAAGCAGTAGAAAAGAAA+AGG | - | chr1_3:71235092-71235111 | None:intergenic | 30.0% | |
| !! | TTGTTGATTTATTCACTAGC+TGG | + | chr1_3:71235107-71235126 | Msa0138370:five_prime_UTR | 30.0% |
| CATGATAAAGAAAGAAACAC+AGG | + | chr1_3:71235143-71235162 | Msa0138370:CDS | 30.0% | |
| CAGTTGTATTTGAACCAAAT+TGG | + | chr1_3:71235313-71235332 | Msa0138370:intron | 30.0% | |
| GTTGTATTTGAACCAAATTG+GGG | + | chr1_3:71235315-71235334 | Msa0138370:intron | 30.0% | |
| TTGTATTTGAACCAAATTGG+GGG | + | chr1_3:71235316-71235335 | Msa0138370:intron | 30.0% | |
| AATATGCATTCCACATTGAT+TGG | + | chr1_3:71235436-71235455 | Msa0138370:intron | 30.0% | |
| AAGCTTGCAATAAAAAGGAA+TGG | - | chr1_3:71235637-71235656 | None:intergenic | 30.0% | |
| ! | TTCCTTTTTATTGCAAGCTT+TGG | + | chr1_3:71235637-71235656 | Msa0138370:intron | 30.0% |
| ! | ATTGGGAAAGATTTAAAACG+AGG | - | chr1_3:71235728-71235747 | None:intergenic | 30.0% |
| CTCAAAGTATAAAGAACATG+TGG | + | chr1_3:71235887-71235906 | Msa0138370:CDS | 30.0% | |
| AAAGTTTCAGAGATTAGAAG+CGG | + | chr1_3:71235915-71235934 | Msa0138370:CDS | 30.0% | |
| GAATGTGGTTAATTGAAAGT+AGG | + | chr1_3:71236118-71236137 | Msa0138370:three_prime_UTR | 30.0% | |
| !!! | GAAAGTAGGGTTTTTAGTAT+TGG | + | chr1_3:71236132-71236151 | Msa0138370:three_prime_UTR | 30.0% |
| ATGAATACACGAGCAAAATA+TGG | - | chr1_3:71236215-71236234 | None:intergenic | 30.0% | |
| CCATCAATTTGATGTAAAGA+TGG | + | chr1_3:71236241-71236260 | Msa0138370:three_prime_UTR | 30.0% | |
| GTTTATGTTACACTCTTTGT+TGG | + | chr1_3:71235010-71235029 | Msa0138370:five_prime_UTR | 30.0% | |
| AACAAGCAGTAGAAAAGAAA+AGG | - | chr1_3:71235092-71235111 | None:intergenic | 30.0% | |
| !! | TTGTTGATTTATTCACTAGC+TGG | + | chr1_3:71235107-71235126 | Msa0138370:five_prime_UTR | 30.0% |
| CATGATAAAGAAAGAAACAC+AGG | + | chr1_3:71235143-71235162 | Msa0138370:CDS | 30.0% | |
| CAGTTGTATTTGAACCAAAT+TGG | + | chr1_3:71235313-71235332 | Msa0138370:intron | 30.0% | |
| GTTGTATTTGAACCAAATTG+GGG | + | chr1_3:71235315-71235334 | Msa0138370:intron | 30.0% | |
| TTGTATTTGAACCAAATTGG+GGG | + | chr1_3:71235316-71235335 | Msa0138370:intron | 30.0% | |
| AATATGCATTCCACATTGAT+TGG | + | chr1_3:71235436-71235455 | Msa0138370:intron | 30.0% | |
| AAGCTTGCAATAAAAAGGAA+TGG | - | chr1_3:71235637-71235656 | None:intergenic | 30.0% | |
| ! | TTCCTTTTTATTGCAAGCTT+TGG | + | chr1_3:71235637-71235656 | Msa0138370:intron | 30.0% |
| ! | ATTGGGAAAGATTTAAAACG+AGG | - | chr1_3:71235728-71235747 | None:intergenic | 30.0% |
| CTCAAAGTATAAAGAACATG+TGG | + | chr1_3:71235887-71235906 | Msa0138370:CDS | 30.0% | |
| AAAGTTTCAGAGATTAGAAG+CGG | + | chr1_3:71235915-71235934 | Msa0138370:CDS | 30.0% | |
| GAATGTGGTTAATTGAAAGT+AGG | + | chr1_3:71236118-71236137 | Msa0138370:three_prime_UTR | 30.0% | |
| !!! | GAAAGTAGGGTTTTTAGTAT+TGG | + | chr1_3:71236132-71236151 | Msa0138370:three_prime_UTR | 30.0% |
| ATGAATACACGAGCAAAATA+TGG | - | chr1_3:71236215-71236234 | None:intergenic | 30.0% | |
| ACTCTTTGTTGGAGTTAGAA+GGG | + | chr1_3:71235021-71235040 | Msa0138370:five_prime_UTR | 35.0% | |
| GTCAAACAACAGTCTTTACA+AGG | - | chr1_3:71235070-71235089 | None:intergenic | 35.0% | |
| !! | GAGGTTCTAAAGGTAAAATC+CGG | + | chr1_3:71235261-71235280 | Msa0138370:intron | 35.0% |
| TTGTGTTTCAATGAACTTGG+AGG | + | chr1_3:71235404-71235423 | Msa0138370:intron | 35.0% | |
| TGTGTTTCAATGAACTTGGA+GGG | + | chr1_3:71235405-71235424 | Msa0138370:intron | 35.0% | |
| AAACTAAACTGGCACGAAAT+TGG | - | chr1_3:71235462-71235481 | None:intergenic | 35.0% | |
| !!! | TTTCGTGCCAGTTTAGTTTT+TGG | + | chr1_3:71235463-71235482 | Msa0138370:intron | 35.0% |
| TACGAAAAACATGCTAGATG+TGG | - | chr1_3:71235603-71235622 | None:intergenic | 35.0% | |
| AGCCAAAGCTTGCAATAAAA+AGG | - | chr1_3:71235642-71235661 | None:intergenic | 35.0% | |
| GAAGAAATTCAAATGCATGC+CGG | + | chr1_3:71235837-71235856 | Msa0138370:CDS | 35.0% | |
| AAGTTTCAGAGATTAGAAGC+GGG | + | chr1_3:71235916-71235935 | Msa0138370:CDS | 35.0% | |
| ACTCTTTGTTGGAGTTAGAA+GGG | + | chr1_3:71235021-71235040 | Msa0138370:five_prime_UTR | 35.0% | |
| GTCAAACAACAGTCTTTACA+AGG | - | chr1_3:71235070-71235089 | None:intergenic | 35.0% | |
| !! | GAGGTTCTAAAGGTAAAATC+CGG | + | chr1_3:71235261-71235280 | Msa0138370:intron | 35.0% |
| TTGTGTTTCAATGAACTTGG+AGG | + | chr1_3:71235404-71235423 | Msa0138370:intron | 35.0% | |
| TGTGTTTCAATGAACTTGGA+GGG | + | chr1_3:71235405-71235424 | Msa0138370:intron | 35.0% | |
| AAACTAAACTGGCACGAAAT+TGG | - | chr1_3:71235462-71235481 | None:intergenic | 35.0% | |
| !!! | TTTCGTGCCAGTTTAGTTTT+TGG | + | chr1_3:71235463-71235482 | Msa0138370:intron | 35.0% |
| TACGAAAAACATGCTAGATG+TGG | - | chr1_3:71235603-71235622 | None:intergenic | 35.0% | |
| AGCCAAAGCTTGCAATAAAA+AGG | - | chr1_3:71235642-71235661 | None:intergenic | 35.0% | |
| GAAGAAATTCAAATGCATGC+CGG | + | chr1_3:71235837-71235856 | Msa0138370:CDS | 35.0% | |
| AAGTTTCAGAGATTAGAAGC+GGG | + | chr1_3:71235916-71235935 | Msa0138370:CDS | 35.0% | |
| CACTCTTTGTTGGAGTTAGA+AGG | + | chr1_3:71235020-71235039 | Msa0138370:five_prime_UTR | 40.0% | |
| TCACTAGCTGGAAACTCAAA+TGG | + | chr1_3:71235119-71235138 | Msa0138370:exon | 40.0% | |
| TGATCATGATGTGGGCATTA+TGG | + | chr1_3:71235224-71235243 | Msa0138370:CDS | 40.0% | |
| TTGAACCAAATTGGGGGAAA+AGG | + | chr1_3:71235322-71235341 | Msa0138370:intron | 40.0% | |
| ACGAAATTGGCCAATCAATG+TGG | - | chr1_3:71235449-71235468 | None:intergenic | 40.0% | |
| GAGCAAAATATGGAGCTGAA+TGG | - | chr1_3:71236205-71236224 | None:intergenic | 40.0% | |
| CACTCTTTGTTGGAGTTAGA+AGG | + | chr1_3:71235020-71235039 | Msa0138370:five_prime_UTR | 40.0% | |
| TCACTAGCTGGAAACTCAAA+TGG | + | chr1_3:71235119-71235138 | Msa0138370:exon | 40.0% | |
| TGATCATGATGTGGGCATTA+TGG | + | chr1_3:71235224-71235243 | Msa0138370:CDS | 40.0% | |
| TTGAACCAAATTGGGGGAAA+AGG | + | chr1_3:71235322-71235341 | Msa0138370:intron | 40.0% | |
| ACGAAATTGGCCAATCAATG+TGG | - | chr1_3:71235449-71235468 | None:intergenic | 40.0% | |
| GAGCAAAATATGGAGCTGAA+TGG | - | chr1_3:71236205-71236224 | None:intergenic | 40.0% | |
| TGCCGAAGCTAAGAAGATGT+CGG | + | chr1_3:71235185-71235204 | Msa0138370:CDS | 45.0% | |
| GTCCGACATCTTCTTAGCTT+CGG | - | chr1_3:71235190-71235209 | None:intergenic | 45.0% | |
| CAGCTAGCTGATCATGATGT+GGG | + | chr1_3:71235216-71235235 | Msa0138370:CDS | 45.0% | |
| TGTGGGCATTATGGAAAGAG+AGG | + | chr1_3:71235233-71235252 | Msa0138370:CDS | 45.0% | |
| TGGGTAGCAACTAGCATCTT+AGG | - | chr1_3:71235496-71235515 | None:intergenic | 45.0% | |
| GGCATCTGAATTGAAGTTGC+AGG | + | chr1_3:71235794-71235813 | Msa0138370:intron | 45.0% | |
| TGCCGAAGCTAAGAAGATGT+CGG | + | chr1_3:71235185-71235204 | Msa0138370:CDS | 45.0% | |
| GTCCGACATCTTCTTAGCTT+CGG | - | chr1_3:71235190-71235209 | None:intergenic | 45.0% | |
| CAGCTAGCTGATCATGATGT+GGG | + | chr1_3:71235216-71235235 | Msa0138370:CDS | 45.0% | |
| TGTGGGCATTATGGAAAGAG+AGG | + | chr1_3:71235233-71235252 | Msa0138370:CDS | 45.0% | |
| TGGGTAGCAACTAGCATCTT+AGG | - | chr1_3:71235496-71235515 | None:intergenic | 45.0% | |
| GGCATCTGAATTGAAGTTGC+AGG | + | chr1_3:71235794-71235813 | Msa0138370:intron | 45.0% | |
| CCACATCATGATCAGCTAGC+TGG | - | chr1_3:71235218-71235237 | None:intergenic | 50.0% | |
| CCAGCTAGCTGATCATGATG+TGG | + | chr1_3:71235215-71235234 | Msa0138370:CDS | 50.0% | |
| TATGGAAAGAGAGGCAGCTG+AGG | + | chr1_3:71235242-71235261 | Msa0138370:CDS | 50.0% | |
| ! | AGAGGCAGCTGAGGTTCTAA+AGG | + | chr1_3:71235251-71235270 | Msa0138370:CDS | 50.0% |
| ! | CAACGCCTTTTCCCCCAATT+TGG | - | chr1_3:71235330-71235349 | None:intergenic | 50.0% |
| ! | CAAATTGGGGGAAAAGGCGT+TGG | + | chr1_3:71235328-71235347 | Msa0138370:intron | 50.0% |
| CCACATCATGATCAGCTAGC+TGG | - | chr1_3:71235218-71235237 | None:intergenic | 50.0% | |
| CCAGCTAGCTGATCATGATG+TGG | + | chr1_3:71235215-71235234 | Msa0138370:CDS | 50.0% | |
| TATGGAAAGAGAGGCAGCTG+AGG | + | chr1_3:71235242-71235261 | Msa0138370:CDS | 50.0% | |
| ! | AGAGGCAGCTGAGGTTCTAA+AGG | + | chr1_3:71235251-71235270 | Msa0138370:CDS | 50.0% |
| ! | CAACGCCTTTTCCCCCAATT+TGG | - | chr1_3:71235330-71235349 | None:intergenic | 50.0% |
| ! | CAAATTGGGGGAAAAGGCGT+TGG | + | chr1_3:71235328-71235347 | Msa0138370:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 71235010 | 71236262 | 71235010 | ID=Msa0138370;Name=Msa0138370 |
| chr1_3 | mRNA | 71235010 | 71236262 | 71235010 | ID=Msa0138370-mRNA-1;Parent=Msa0138370;Name=Msa0138370-mRNA-1;_AED=0.00;_eAED=0.00;_QI=128|1|1|1|1|1|2|219|127 |
| chr1_3 | exon | 71235010 | 71235272 | 71235010 | ID=Msa0138370-mRNA-1:exon:24759;Parent=Msa0138370-mRNA-1 |
| chr1_3 | exon | 71235795 | 71236262 | 71235795 | ID=Msa0138370-mRNA-1:exon:24760;Parent=Msa0138370-mRNA-1 |
| chr1_3 | five_prime_UTR | 71235010 | 71235137 | 71235010 | ID=Msa0138370-mRNA-1:five_prime_utr;Parent=Msa0138370-mRNA-1 |
| chr1_3 | CDS | 71235138 | 71235272 | 71235138 | ID=Msa0138370-mRNA-1:cds;Parent=Msa0138370-mRNA-1 |
| chr1_3 | CDS | 71235795 | 71236043 | 71235795 | ID=Msa0138370-mRNA-1:cds;Parent=Msa0138370-mRNA-1 |
| chr1_3 | three_prime_UTR | 71236044 | 71236262 | 71236044 | ID=Msa0138370-mRNA-1:three_prime_utr;Parent=Msa0138370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
