Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0161820 | XP_013467733.1 | 95.888 | 608 | 6 | 3 | 1 | 589 | 1 | 608 | 0.0 | 1182 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0161820 | sp|Q84W89|RH37_ARATH | 72.535 | 568 | 112 | 8 | 7 | 537 | 2 | 562 | 0.0 | 795 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0161820 | A0A072VUJ1 | 95.888 | 608 | 6 | 3 | 1 | 589 | 1 | 608 | 0.0 | 1182 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0018070 | Msa0161820 | 0.803806 | 2.924610e-49 | -8.615850e-47 |
Msa0020390 | Msa0161820 | 0.807822 | 4.190130e-50 | -8.615850e-47 |
Msa0115190 | Msa0161820 | 0.851031 | 1.156051e-60 | -8.615850e-47 |
Msa0118540 | Msa0161820 | 0.886789 | 2.519520e-72 | -8.615850e-47 |
Msa0161820 | Msa0190120 | 0.800719 | 1.263309e-48 | -8.615850e-47 |
Msa0161820 | Msa0233370 | 0.802610 | 5.169388e-49 | -8.615850e-47 |
Msa0161820 | Msa0271790 | 0.800090 | 1.696336e-48 | -8.615850e-47 |
Msa0161820 | Msa0321690 | 0.802704 | 4.945509e-49 | -8.615850e-47 |
Msa0161820 | Msa0358860 | 0.816377 | 5.705186e-52 | -8.615850e-47 |
Msa0161820 | Msa0388730 | 0.817658 | 2.941290e-52 | -8.615850e-47 |
Msa0161820 | Msa0403770 | 0.816880 | 4.402026e-52 | -8.615850e-47 |
Msa0161820 | Msa0463340 | 0.801925 | 7.152831e-49 | -8.615850e-47 |
Msa0161820 | Msa0482940 | 0.805195 | 1.501075e-49 | -8.615850e-47 |
Msa0161820 | Msa0542560 | 0.826171 | 3.140355e-54 | -8.615850e-47 |
Msa0161820 | Msa0604290 | 0.804115 | 2.521540e-49 | -8.615850e-47 |
Msa0161820 | Msa0746170 | 0.806006 | 1.014368e-49 | -8.615850e-47 |
Msa0161820 | Msa0746210 | 0.806358 | 8.549519e-50 | -8.615850e-47 |
Msa0161820 | Msa0972900 | 0.839614 | 1.425830e-57 | -8.615850e-47 |
Msa0161820 | Msa0994370 | 0.806503 | 7.969483e-50 | -8.615850e-47 |
Msa0161820 | Msa1054510 | 0.805820 | 1.109699e-49 | -8.615850e-47 |
Msa0161820 | Msa1133250 | 0.814288 | 1.662812e-51 | -8.615850e-47 |
Msa0161820 | Msa1194190 | 0.822767 | 1.986496e-53 | -8.615850e-47 |
Msa0161820 | Msa1206270 | 0.803507 | 3.372913e-49 | -8.615850e-47 |
Msa0161820 | Msa1259540 | 0.822213 | 2.672205e-53 | -8.615850e-47 |
Msa0161820 | Msa1370590 | 0.800996 | 1.108996e-48 | -8.615850e-47 |
Msa0161820 | Msa1384100 | 0.804010 | 2.652588e-49 | -8.615850e-47 |
Msa0161820 | Msa1419000 | 0.827730 | 1.331108e-54 | -8.615850e-47 |
Msa0161820 | Msa1422810 | 0.806512 | 7.936875e-50 | -8.615850e-47 |
Msa0161820 | Msa1438840 | 0.808346 | 3.240355e-50 | -8.615850e-47 |
Msa0161820 | Msa1444120 | 0.800677 | 1.288216e-48 | -8.615850e-47 |
Msa0161820 | Msa1458090 | 0.802282 | 6.041925e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0161820 | MtrunA17_Chr1g0176041 | 95.888 | 608 | 6 | 3 | 1 | 589 | 1 | 608 | 0.0 | 1182 |
Msa0161820 | MtrunA17_Chr3g0121351 | 69.856 | 627 | 128 | 10 | 8 | 589 | 3 | 613 | 0.0 | 768 |
Msa0161820 | MtrunA17_Chr4g0063551 | 58.448 | 580 | 192 | 12 | 8 | 554 | 3 | 566 | 0.0 | 610 |
Msa0161820 | MtrunA17_Chr3g0107851 | 46.234 | 385 | 195 | 4 | 133 | 514 | 101 | 476 | 4.14e-109 | 338 |
Msa0161820 | MtrunA17_Chr2g0330401 | 45.026 | 382 | 186 | 6 | 136 | 512 | 83 | 445 | 1.05e-105 | 327 |
Msa0161820 | MtrunA17_Chr6g0449911 | 42.609 | 460 | 229 | 8 | 136 | 578 | 152 | 593 | 8.06e-101 | 321 |
Msa0161820 | MtrunA17_Chr2g0293631 | 42.958 | 426 | 209 | 8 | 136 | 545 | 483 | 890 | 1.55e-97 | 322 |
Msa0161820 | MtrunA17_Chr4g0076491 | 39.294 | 453 | 229 | 9 | 110 | 528 | 244 | 684 | 1.20e-95 | 307 |
Msa0161820 | MtrunA17_Chr7g0270131 | 41.589 | 428 | 218 | 10 | 104 | 514 | 172 | 584 | 1.41e-95 | 309 |
Msa0161820 | MtrunA17_Chr6g0449741 | 40.094 | 424 | 216 | 7 | 132 | 528 | 232 | 644 | 1.47e-93 | 301 |
Msa0161820 | MtrunA17_Chr1g0157691 | 39.633 | 381 | 210 | 4 | 138 | 512 | 136 | 502 | 1.92e-88 | 285 |
Msa0161820 | MtrunA17_Chr1g0200181 | 39.637 | 386 | 213 | 5 | 138 | 517 | 134 | 505 | 4.26e-88 | 284 |
Msa0161820 | MtrunA17_Chr4g0058591 | 41.775 | 383 | 201 | 8 | 105 | 482 | 156 | 521 | 9.07e-87 | 279 |
Msa0161820 | MtrunA17_Chr2g0277821 | 40.256 | 390 | 215 | 5 | 134 | 520 | 489 | 863 | 2.04e-84 | 285 |
Msa0161820 | MtrunA17_Chr5g0409981 | 41.206 | 398 | 205 | 10 | 125 | 511 | 77 | 456 | 1.16e-80 | 263 |
Msa0161820 | MtrunA17_Chr6g0461751 | 35.024 | 414 | 252 | 5 | 143 | 552 | 134 | 534 | 4.31e-74 | 246 |
Msa0161820 | MtrunA17_Chr5g0442191 | 38.462 | 364 | 207 | 8 | 150 | 512 | 82 | 429 | 6.76e-73 | 244 |
Msa0161820 | MtrunA17_Chr7g0271121 | 41.279 | 344 | 181 | 8 | 173 | 512 | 130 | 456 | 2.27e-72 | 246 |
Msa0161820 | MtrunA17_Chr3g0095031 | 39.316 | 351 | 196 | 7 | 170 | 519 | 111 | 445 | 2.39e-70 | 236 |
Msa0161820 | MtrunA17_Chr1g0193491 | 36.609 | 407 | 238 | 9 | 118 | 522 | 87 | 475 | 1.24e-69 | 237 |
Msa0161820 | MtrunA17_Chr6g0483491 | 35.422 | 367 | 217 | 6 | 147 | 512 | 8 | 355 | 2.22e-63 | 215 |
Msa0161820 | MtrunA17_Chr7g0236841 | 35.150 | 367 | 218 | 6 | 147 | 512 | 8 | 355 | 6.30e-63 | 213 |
Msa0161820 | MtrunA17_Chr3g0098121 | 37.037 | 378 | 200 | 7 | 148 | 513 | 151 | 502 | 1.97e-60 | 214 |
Msa0161820 | MtrunA17_Chr2g0300291 | 36.729 | 373 | 209 | 8 | 148 | 513 | 140 | 492 | 3.83e-60 | 213 |
Msa0161820 | MtrunA17_Chr7g0263771 | 31.121 | 437 | 255 | 9 | 111 | 524 | 89 | 502 | 2.37e-56 | 200 |
Msa0161820 | MtrunA17_Chr2g0310581 | 32.494 | 437 | 265 | 10 | 132 | 559 | 36 | 451 | 6.94e-56 | 196 |
Msa0161820 | MtrunA17_Chr2g0297261 | 32.383 | 386 | 229 | 9 | 130 | 510 | 17 | 375 | 1.50e-55 | 193 |
Msa0161820 | MtrunA17_Chr4g0040761 | 35.616 | 365 | 215 | 8 | 150 | 512 | 20 | 366 | 1.24e-54 | 198 |
Msa0161820 | MtrunA17_Chr1g0204391 | 35.101 | 396 | 216 | 12 | 141 | 512 | 36 | 414 | 1.88e-54 | 194 |
Msa0161820 | MtrunA17_Chr6g0475251 | 34.584 | 373 | 219 | 9 | 148 | 512 | 102 | 457 | 1.98e-54 | 196 |
Msa0161820 | MtrunA17_Chr4g0070981 | 33.058 | 363 | 223 | 5 | 148 | 510 | 40 | 382 | 5.55e-54 | 189 |
Msa0161820 | MtrunA17_Chr2g0299681 | 31.220 | 410 | 246 | 8 | 102 | 510 | 8 | 382 | 2.96e-53 | 187 |
Msa0161820 | MtrunA17_Chr8g0342861 | 32.970 | 367 | 218 | 6 | 148 | 510 | 40 | 382 | 3.87e-53 | 186 |
Msa0161820 | MtrunA17_Chr3g0114081 | 35.405 | 370 | 201 | 10 | 172 | 519 | 39 | 392 | 5.94e-53 | 190 |
Msa0161820 | MtrunA17_Chr2g0329931 | 33.515 | 367 | 216 | 7 | 148 | 510 | 40 | 382 | 1.68e-52 | 185 |
Msa0161820 | MtrunA17_Chr7g0236831 | 28.302 | 583 | 333 | 14 | 60 | 572 | 81 | 648 | 7.00e-52 | 190 |
Msa0161820 | MtrunA17_Chr4g0003441 | 35.211 | 355 | 207 | 7 | 168 | 519 | 127 | 461 | 1.16e-51 | 184 |
Msa0161820 | MtrunA17_Chr7g0247191 | 31.452 | 372 | 229 | 9 | 148 | 516 | 149 | 497 | 3.44e-50 | 181 |
Msa0161820 | MtrunA17_Chr8g0386451 | 36.232 | 345 | 205 | 9 | 168 | 505 | 307 | 643 | 3.50e-50 | 185 |
Msa0161820 | MtrunA17_Chr7g0247221 | 30.645 | 372 | 232 | 8 | 148 | 516 | 142 | 490 | 8.90e-50 | 180 |
Msa0161820 | MtrunA17_Chr7g0247181 | 30.914 | 372 | 231 | 9 | 148 | 516 | 139 | 487 | 1.14e-49 | 179 |
Msa0161820 | MtrunA17_Chr1g0149251 | 35.714 | 336 | 193 | 7 | 187 | 519 | 2 | 317 | 4.28e-49 | 174 |
Msa0161820 | MtrunA17_Chr6g0466611 | 32.533 | 375 | 239 | 7 | 147 | 514 | 140 | 507 | 1.37e-48 | 180 |
Msa0161820 | MtrunA17_Chr8g0347161 | 34.375 | 352 | 212 | 10 | 163 | 505 | 116 | 457 | 1.45e-48 | 177 |
Msa0161820 | MtrunA17_Chr8g0347151 | 36.261 | 353 | 208 | 9 | 161 | 505 | 213 | 556 | 2.29e-47 | 176 |
Msa0161820 | MtrunA17_Chr4g0034411 | 33.065 | 372 | 225 | 8 | 146 | 511 | 73 | 426 | 2.62e-46 | 174 |
Msa0161820 | MtrunA17_Chr8g0347171 | 33.516 | 364 | 225 | 10 | 150 | 505 | 161 | 515 | 1.15e-44 | 167 |
Msa0161820 | MtrunA17_Chr5g0443991 | 32.527 | 372 | 228 | 8 | 146 | 511 | 73 | 427 | 1.78e-44 | 169 |
Msa0161820 | MtrunA17_Chr4g0062301 | 33.038 | 339 | 196 | 9 | 172 | 500 | 120 | 437 | 2.57e-43 | 163 |
Msa0161820 | MtrunA17_Chr2g0307471 | 31.667 | 360 | 218 | 7 | 149 | 500 | 91 | 430 | 4.79e-43 | 162 |
Msa0161820 | MtrunA17_Chr2g0301281 | 29.398 | 432 | 228 | 13 | 149 | 512 | 41 | 463 | 3.08e-42 | 160 |
Msa0161820 | MtrunA17_Chr4g0029191 | 29.167 | 432 | 229 | 14 | 149 | 512 | 44 | 466 | 6.26e-42 | 160 |
Msa0161820 | MtrunA17_Chr1g0179761 | 29.358 | 436 | 244 | 15 | 113 | 512 | 40 | 447 | 7.13e-36 | 140 |
Msa0161820 | MtrunA17_Chr2g0309551 | 27.972 | 429 | 264 | 9 | 116 | 505 | 82 | 504 | 6.15e-35 | 139 |
Msa0161820 | MtrunA17_Chr3g0145781 | 30.127 | 395 | 227 | 15 | 147 | 511 | 130 | 505 | 6.19e-34 | 135 |
Msa0161820 | MtrunA17_Chr1g0192021 | 27.187 | 423 | 246 | 10 | 137 | 512 | 11 | 418 | 4.22e-33 | 134 |
Msa0161820 | MtrunA17_Chr5g0429221 | 27.371 | 369 | 244 | 9 | 147 | 512 | 1 | 348 | 1.71e-29 | 120 |
Msa0161820 | MtrunA17_Chr4g0074521 | 30.303 | 396 | 226 | 13 | 134 | 500 | 67 | 441 | 1.62e-28 | 119 |
Msa0161820 | MtrunA17_Chr3g0137901 | 41.176 | 136 | 73 | 1 | 384 | 519 | 25 | 153 | 8.23e-27 | 107 |
Msa0161820 | MtrunA17_Chr1g0169331 | 25.668 | 374 | 225 | 9 | 170 | 510 | 12 | 365 | 3.37e-25 | 108 |
Msa0161820 | MtrunA17_Chr4g0004301 | 25.255 | 392 | 210 | 10 | 186 | 513 | 70 | 442 | 9.82e-24 | 105 |
Msa0161820 | MtrunA17_Chr8g0349951 | 34.591 | 159 | 94 | 3 | 147 | 304 | 8 | 157 | 2.07e-23 | 97.1 |
Msa0161820 | MtrunA17_Chr4g0039471 | 31.579 | 209 | 124 | 4 | 149 | 353 | 223 | 416 | 6.13e-23 | 101 |
Msa0161820 | MtrunA17_Chr4g0039471 | 29.952 | 207 | 93 | 6 | 149 | 355 | 2 | 156 | 3.01e-17 | 84.3 |
Msa0161820 | MtrunA17_Chr5g0434301 | 25.000 | 392 | 211 | 10 | 186 | 513 | 70 | 442 | 1.61e-22 | 101 |
Msa0161820 | MtrunA17_Chr4g0062321 | 32.018 | 228 | 132 | 7 | 259 | 478 | 23 | 235 | 4.46e-21 | 92.8 |
Msa0161820 | MtrunA17_Chr8g0342851 | 24.629 | 337 | 200 | 6 | 178 | 510 | 2 | 288 | 1.07e-20 | 93.6 |
Msa0161820 | MtrunA17_Chr8g0354761 | 25.843 | 356 | 221 | 10 | 172 | 511 | 31 | 359 | 3.68e-19 | 90.5 |
Msa0161820 | MtrunA17_Chr1g0155201 | 31.330 | 233 | 135 | 7 | 279 | 510 | 14 | 222 | 5.01e-19 | 89.0 |
Msa0161820 | MtrunA17_Chr4g0025141 | 33.333 | 189 | 105 | 5 | 337 | 512 | 15 | 195 | 5.32e-19 | 86.7 |
Msa0161820 | MtrunA17_Chr3g0137891 | 34.463 | 177 | 101 | 5 | 187 | 361 | 2 | 165 | 1.00e-17 | 82.8 |
Msa0161820 | MtrunA17_Chr8g0364251 | 34.211 | 152 | 92 | 4 | 375 | 521 | 400 | 548 | 1.00e-16 | 83.6 |
Msa0161820 | MtrunA17_Chr8g0364251 | 25.641 | 234 | 144 | 8 | 109 | 328 | 59 | 276 | 4.45e-11 | 65.9 |
Msa0161820 | MtrunA17_Chr0c30g0494091 | 31.441 | 229 | 135 | 6 | 134 | 352 | 67 | 283 | 6.48e-16 | 80.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0161820 | AT2G42520.2 | 72.535 | 568 | 112 | 8 | 7 | 537 | 2 | 562 | 0.0 | 795 |
Msa0161820 | AT2G42520.1 | 72.535 | 568 | 112 | 8 | 7 | 537 | 2 | 562 | 0.0 | 795 |
Msa0161820 | AT2G42520.3 | 72.535 | 568 | 112 | 8 | 7 | 537 | 2 | 562 | 0.0 | 795 |
Msa0161820 | AT3G58570.1 | 71.171 | 555 | 132 | 6 | 5 | 537 | 1 | 549 | 0.0 | 758 |
Msa0161820 | AT3G58510.1 | 70.345 | 580 | 124 | 11 | 7 | 553 | 2 | 566 | 0.0 | 751 |
Msa0161820 | AT3G58510.3 | 70.345 | 580 | 124 | 11 | 7 | 553 | 2 | 566 | 0.0 | 751 |
Msa0161820 | AT3G58510.2 | 70.345 | 580 | 124 | 11 | 7 | 553 | 2 | 566 | 0.0 | 751 |
Msa0161820 | AT5G63120.2 | 46.753 | 385 | 179 | 8 | 133 | 512 | 152 | 515 | 1.44e-107 | 335 |
Msa0161820 | AT1G55150.1 | 43.455 | 382 | 192 | 6 | 136 | 512 | 87 | 449 | 1.84e-105 | 327 |
Msa0161820 | AT5G14610.6 | 39.698 | 529 | 258 | 13 | 43 | 538 | 48 | 548 | 4.91e-105 | 330 |
Msa0161820 | AT5G14610.2 | 39.698 | 529 | 258 | 13 | 43 | 538 | 48 | 548 | 5.67e-105 | 330 |
Msa0161820 | AT5G14610.5 | 39.698 | 529 | 258 | 13 | 43 | 538 | 56 | 556 | 9.98e-105 | 330 |
Msa0161820 | AT1G55150.2 | 43.717 | 382 | 191 | 7 | 136 | 512 | 112 | 474 | 1.35e-104 | 326 |
Msa0161820 | AT3G01540.1 | 44.391 | 419 | 198 | 8 | 136 | 538 | 146 | 545 | 6.79e-104 | 327 |
Msa0161820 | AT3G01540.4 | 44.391 | 419 | 198 | 8 | 136 | 538 | 146 | 545 | 7.51e-104 | 327 |
Msa0161820 | AT3G01540.2 | 44.391 | 419 | 198 | 8 | 136 | 538 | 146 | 545 | 7.51e-104 | 327 |
Msa0161820 | AT3G01540.3 | 44.391 | 419 | 198 | 8 | 136 | 538 | 146 | 545 | 7.51e-104 | 327 |
Msa0161820 | AT5G14610.7 | 45.220 | 387 | 177 | 8 | 168 | 538 | 50 | 417 | 6.67e-99 | 310 |
Msa0161820 | AT5G14610.3 | 45.220 | 387 | 177 | 8 | 168 | 538 | 50 | 417 | 6.67e-99 | 310 |
Msa0161820 | AT5G14610.1 | 43.659 | 410 | 196 | 8 | 145 | 538 | 226 | 616 | 3.06e-98 | 315 |
Msa0161820 | AT3G06480.1 | 42.927 | 410 | 201 | 7 | 136 | 529 | 423 | 815 | 7.85e-94 | 311 |
Msa0161820 | AT2G47330.1 | 41.355 | 428 | 216 | 8 | 118 | 529 | 202 | 610 | 8.15e-92 | 299 |
Msa0161820 | AT2G33730.1 | 39.623 | 424 | 220 | 7 | 132 | 528 | 297 | 711 | 4.68e-91 | 296 |
Msa0161820 | AT5G63120.1 | 45.640 | 344 | 161 | 8 | 133 | 471 | 152 | 474 | 2.17e-88 | 282 |
Msa0161820 | AT5G63120.3 | 45.640 | 344 | 161 | 8 | 133 | 471 | 152 | 474 | 2.67e-88 | 282 |
Msa0161820 | AT5G63120.4 | 45.640 | 344 | 161 | 8 | 133 | 471 | 152 | 474 | 2.67e-88 | 282 |
Msa0161820 | AT5G63120.5 | 45.640 | 344 | 161 | 8 | 133 | 471 | 152 | 474 | 2.67e-88 | 282 |
Msa0161820 | AT5G51280.1 | 39.637 | 386 | 213 | 5 | 138 | 517 | 136 | 507 | 3.60e-88 | 285 |
Msa0161820 | AT1G20920.2 | 39.130 | 391 | 220 | 4 | 133 | 520 | 176 | 551 | 4.74e-88 | 290 |
Msa0161820 | AT4G33370.1 | 38.402 | 388 | 219 | 4 | 136 | 517 | 85 | 458 | 3.17e-87 | 281 |
Msa0161820 | AT1G20920.4 | 39.844 | 384 | 213 | 5 | 133 | 513 | 514 | 882 | 1.74e-86 | 292 |
Msa0161820 | AT1G20920.6 | 39.844 | 384 | 213 | 5 | 133 | 513 | 514 | 882 | 1.74e-86 | 292 |
Msa0161820 | AT1G20920.3 | 39.844 | 384 | 213 | 5 | 133 | 513 | 514 | 882 | 1.74e-86 | 292 |
Msa0161820 | AT1G20920.7 | 39.844 | 384 | 213 | 5 | 133 | 513 | 514 | 882 | 1.74e-86 | 292 |
Msa0161820 | AT1G20920.5 | 39.844 | 384 | 213 | 5 | 133 | 513 | 514 | 882 | 1.74e-86 | 292 |
Msa0161820 | AT1G20920.1 | 39.844 | 384 | 213 | 5 | 133 | 513 | 514 | 882 | 1.74e-86 | 292 |
Msa0161820 | AT5G14610.4 | 38.667 | 450 | 231 | 11 | 43 | 473 | 56 | 479 | 2.24e-83 | 270 |
Msa0161820 | AT1G31970.1 | 38.534 | 423 | 214 | 11 | 147 | 545 | 115 | 515 | 4.22e-79 | 259 |
Msa0161820 | AT3G06480.2 | 43.228 | 347 | 178 | 6 | 136 | 480 | 423 | 752 | 2.85e-77 | 261 |
Msa0161820 | AT3G02065.3 | 37.435 | 382 | 226 | 5 | 133 | 513 | 95 | 464 | 3.92e-76 | 251 |
Msa0161820 | AT3G02065.2 | 37.435 | 382 | 226 | 5 | 133 | 513 | 95 | 464 | 3.92e-76 | 251 |
Msa0161820 | AT3G09620.1 | 38.021 | 384 | 191 | 6 | 133 | 513 | 381 | 720 | 6.13e-75 | 258 |
Msa0161820 | AT3G09620.2 | 38.021 | 384 | 191 | 6 | 133 | 513 | 382 | 721 | 6.45e-75 | 258 |
Msa0161820 | AT1G28180.1 | 40.162 | 371 | 182 | 7 | 178 | 528 | 3 | 353 | 1.97e-74 | 242 |
Msa0161820 | AT5G60990.1 | 33.853 | 449 | 257 | 6 | 147 | 566 | 8 | 445 | 4.14e-71 | 236 |
Msa0161820 | AT3G22330.1 | 37.960 | 353 | 198 | 7 | 170 | 519 | 126 | 460 | 4.57e-70 | 238 |
Msa0161820 | AT5G26742.1 | 38.564 | 376 | 208 | 8 | 150 | 519 | 104 | 462 | 2.90e-69 | 238 |
Msa0161820 | AT5G26742.2 | 38.564 | 376 | 208 | 8 | 150 | 519 | 104 | 462 | 2.95e-69 | 238 |
Msa0161820 | AT3G22310.2 | 39.003 | 341 | 187 | 8 | 170 | 507 | 138 | 460 | 1.12e-68 | 233 |
Msa0161820 | AT3G22310.1 | 39.003 | 341 | 187 | 8 | 170 | 507 | 138 | 460 | 1.53e-68 | 233 |
Msa0161820 | AT5G26742.3 | 40.698 | 344 | 181 | 8 | 182 | 519 | 43 | 369 | 8.73e-67 | 229 |
Msa0161820 | AT3G02065.1 | 36.795 | 337 | 200 | 5 | 178 | 513 | 3 | 327 | 1.38e-66 | 221 |
Msa0161820 | AT4G16630.1 | 35.854 | 410 | 237 | 8 | 111 | 513 | 128 | 518 | 9.82e-62 | 218 |
Msa0161820 | AT3G09720.2 | 31.377 | 443 | 264 | 10 | 101 | 523 | 88 | 510 | 3.06e-60 | 209 |
Msa0161820 | AT3G09720.1 | 31.377 | 443 | 264 | 10 | 101 | 523 | 88 | 510 | 3.06e-60 | 209 |
Msa0161820 | AT1G16280.1 | 36.695 | 357 | 202 | 7 | 163 | 513 | 70 | 408 | 4.75e-60 | 207 |
Msa0161820 | AT3G19760.1 | 31.335 | 367 | 228 | 6 | 146 | 510 | 33 | 377 | 3.09e-56 | 195 |
Msa0161820 | AT1G51380.1 | 30.270 | 370 | 232 | 6 | 146 | 512 | 20 | 366 | 3.90e-56 | 194 |
Msa0161820 | AT1G77030.1 | 35.083 | 362 | 217 | 6 | 150 | 510 | 30 | 374 | 1.98e-55 | 201 |
Msa0161820 | AT4G00660.1 | 30.914 | 372 | 231 | 8 | 148 | 516 | 131 | 479 | 5.86e-54 | 191 |
Msa0161820 | AT4G00660.2 | 30.914 | 372 | 231 | 8 | 148 | 516 | 131 | 479 | 5.86e-54 | 191 |
Msa0161820 | AT1G72730.1 | 31.795 | 390 | 245 | 6 | 137 | 526 | 30 | 398 | 1.48e-53 | 188 |
Msa0161820 | AT3G13920.2 | 31.051 | 409 | 247 | 8 | 102 | 510 | 8 | 381 | 2.76e-53 | 187 |
Msa0161820 | AT3G13920.5 | 31.051 | 409 | 247 | 8 | 102 | 510 | 12 | 385 | 3.83e-53 | 187 |
Msa0161820 | AT3G13920.1 | 31.051 | 409 | 247 | 8 | 102 | 510 | 8 | 381 | 4.61e-53 | 187 |
Msa0161820 | AT1G54270.2 | 34.746 | 354 | 206 | 8 | 159 | 510 | 46 | 376 | 1.19e-52 | 186 |
Msa0161820 | AT3G13920.3 | 32.812 | 384 | 224 | 7 | 128 | 510 | 21 | 371 | 1.49e-52 | 185 |
Msa0161820 | AT2G45810.1 | 31.492 | 362 | 224 | 6 | 148 | 508 | 154 | 492 | 1.83e-52 | 188 |
Msa0161820 | AT1G54270.1 | 34.637 | 358 | 206 | 8 | 159 | 510 | 46 | 381 | 1.85e-52 | 185 |
Msa0161820 | AT5G11170.1 | 35.211 | 355 | 207 | 7 | 168 | 519 | 66 | 400 | 2.04e-52 | 185 |
Msa0161820 | AT5G11200.1 | 35.211 | 355 | 207 | 7 | 168 | 519 | 66 | 400 | 2.04e-52 | 185 |
Msa0161820 | AT3G13920.4 | 34.278 | 353 | 209 | 7 | 159 | 510 | 46 | 376 | 2.80e-52 | 184 |
Msa0161820 | AT3G61240.2 | 30.663 | 362 | 227 | 6 | 148 | 508 | 124 | 462 | 1.64e-51 | 185 |
Msa0161820 | AT3G61240.1 | 30.663 | 362 | 227 | 6 | 148 | 508 | 124 | 462 | 1.64e-51 | 185 |
Msa0161820 | AT5G05450.1 | 35.279 | 394 | 212 | 15 | 137 | 511 | 13 | 382 | 3.62e-51 | 186 |
Msa0161820 | AT1G71370.1 | 34.586 | 399 | 231 | 12 | 132 | 519 | 2 | 381 | 2.16e-50 | 183 |
Msa0161820 | AT4G09730.1 | 32.095 | 377 | 238 | 7 | 147 | 514 | 111 | 478 | 8.93e-50 | 182 |
Msa0161820 | AT5G11170.2 | 35.417 | 336 | 194 | 7 | 187 | 519 | 2 | 317 | 4.88e-48 | 171 |
Msa0161820 | AT5G08610.1 | 35.613 | 351 | 209 | 8 | 163 | 505 | 397 | 738 | 5.34e-48 | 180 |
Msa0161820 | AT5G11200.3 | 32.576 | 396 | 203 | 9 | 168 | 519 | 66 | 441 | 2.32e-47 | 172 |
Msa0161820 | AT5G11200.2 | 30.676 | 414 | 205 | 9 | 168 | 519 | 66 | 459 | 5.51e-47 | 172 |
Msa0161820 | AT5G08620.1 | 34.593 | 344 | 204 | 9 | 172 | 505 | 104 | 436 | 4.02e-46 | 171 |
Msa0161820 | AT5G62190.1 | 33.140 | 344 | 221 | 5 | 173 | 516 | 121 | 455 | 6.14e-46 | 172 |
Msa0161820 | AT5G65900.1 | 33.983 | 359 | 212 | 8 | 148 | 500 | 154 | 493 | 6.29e-46 | 172 |
Msa0161820 | AT5G54910.1 | 34.043 | 376 | 216 | 12 | 147 | 512 | 70 | 423 | 1.57e-44 | 169 |
Msa0161820 | AT5G63630.1 | 34.844 | 353 | 209 | 8 | 163 | 505 | 69 | 410 | 2.18e-44 | 166 |
Msa0161820 | AT1G63250.1 | 35.159 | 347 | 205 | 9 | 169 | 505 | 349 | 685 | 2.50e-44 | 169 |
Msa0161820 | AT5G63630.2 | 34.844 | 353 | 209 | 8 | 163 | 505 | 263 | 604 | 3.00e-44 | 168 |
Msa0161820 | AT2G40700.1 | 28.868 | 433 | 231 | 11 | 149 | 512 | 31 | 455 | 9.89e-44 | 165 |
Msa0161820 | AT3G18600.1 | 30.667 | 375 | 239 | 8 | 129 | 500 | 71 | 427 | 6.76e-43 | 162 |
Msa0161820 | AT2G07750.1 | 34.682 | 346 | 208 | 9 | 169 | 505 | 396 | 732 | 9.10e-43 | 164 |
Msa0161820 | AT3G16840.1 | 28.448 | 464 | 255 | 12 | 114 | 512 | 156 | 607 | 2.42e-41 | 160 |
Msa0161820 | AT3G16840.2 | 29.070 | 430 | 228 | 12 | 148 | 512 | 191 | 608 | 1.22e-40 | 158 |
Msa0161820 | AT3G53110.1 | 30.456 | 417 | 242 | 14 | 133 | 526 | 76 | 467 | 2.79e-40 | 154 |
Msa0161820 | AT1G12770.2 | 28.186 | 408 | 231 | 10 | 148 | 505 | 110 | 505 | 2.18e-35 | 140 |
Msa0161820 | AT1G12770.1 | 28.186 | 408 | 231 | 10 | 148 | 505 | 110 | 505 | 2.18e-35 | 140 |
Msa0161820 | AT3G06980.1 | 31.122 | 392 | 222 | 15 | 149 | 511 | 375 | 747 | 2.15e-34 | 139 |
Msa0161820 | AT1G71280.2 | 32.958 | 355 | 179 | 13 | 132 | 474 | 2 | 309 | 4.96e-34 | 132 |
Msa0161820 | AT1G71280.1 | 32.687 | 361 | 182 | 15 | 132 | 479 | 2 | 314 | 1.15e-33 | 134 |
Msa0161820 | AT4G34910.1 | 27.525 | 396 | 234 | 8 | 148 | 501 | 46 | 430 | 8.51e-30 | 124 |
Msa0161820 | AT1G51380.2 | 28.287 | 251 | 161 | 4 | 146 | 395 | 20 | 252 | 2.59e-26 | 109 |
Msa0161820 | AT5G19210.2 | 28.650 | 363 | 205 | 13 | 168 | 500 | 96 | 434 | 3.13e-26 | 112 |
Msa0161820 | AT4G15850.1 | 27.569 | 399 | 200 | 16 | 186 | 519 | 73 | 447 | 8.59e-26 | 112 |
Msa0161820 | AT1G51380.4 | 29.439 | 214 | 135 | 3 | 146 | 358 | 20 | 218 | 1.90e-25 | 107 |
Msa0161820 | AT1G51380.3 | 29.439 | 214 | 135 | 3 | 146 | 358 | 20 | 218 | 3.02e-25 | 106 |
Msa0161820 | AT1G28180.2 | 44.828 | 116 | 62 | 1 | 178 | 293 | 3 | 116 | 1.12e-22 | 94.0 |
Msa0161820 | AT5G19210.1 | 27.236 | 246 | 141 | 9 | 279 | 500 | 46 | 277 | 6.91e-15 | 76.3 |
Msa0161820 | AT5G19210.3 | 27.236 | 246 | 141 | 9 | 279 | 500 | 46 | 277 | 6.91e-15 | 76.3 |
Msa0161820 | AT1G59990.1 | 36.036 | 111 | 67 | 3 | 410 | 519 | 427 | 534 | 1.05e-12 | 71.2 |
Msa0161820 | AT1G59990.2 | 36.036 | 111 | 67 | 3 | 410 | 519 | 427 | 534 | 1.24e-12 | 71.2 |
Find 200 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTGCTAGTTATATCTTTC+TGG | 0.065066 | 1_4:-37904003 | Msa0161820:CDS |
ATAGGGGTTTGGGTAATAAT+TGG | 0.216352 | 1_4:-37906755 | Msa0161820:CDS |
GGGTACGGTGGTGGTGGTGG+TGG | 0.226760 | 1_4:-37906678 | Msa0161820:CDS |
ACAAATTACCTGTATCTCTT+TGG | 0.227870 | 1_4:+37905678 | None:intergenic |
TCCGGCCGAGCCACCTTCTT+TGG | 0.231327 | 1_4:-37906787 | Msa0161820:CDS |
ACGTTTGCGGAAATAGATTT+AGG | 0.245357 | 1_4:-37906471 | Msa0161820:CDS |
AGCAGATCGGATGCTGGATA+TGG | 0.291721 | 1_4:-37905791 | Msa0161820:CDS |
AACAGGACGAGCTGGTAAAA+TGG | 0.309296 | 1_4:-37902533 | Msa0161820:CDS |
GGAGGGTACGGTGGTGGTGG+TGG | 0.313676 | 1_4:-37906681 | Msa0161820:CDS |
TCAACTATCTTTCTTATTTG+AGG | 0.314818 | 1_4:+37905760 | None:intergenic |
CTTCTTTGGTGGCCAATGAT+AGG | 0.315024 | 1_4:-37906773 | Msa0161820:CDS |
TGAGAGAGGTGTTGATATTC+TGG | 0.320367 | 1_4:-37905896 | Msa0161820:CDS |
TGTTTGATAAGAAAACTTCT+TGG | 0.325171 | 1_4:+37906083 | None:intergenic |
GGTGGCCAATGATAGGGGTT+TGG | 0.325471 | 1_4:-37906766 | Msa0161820:CDS |
TAGGGGTTTGGGTAATAATT+GGG | 0.327406 | 1_4:-37906754 | Msa0161820:CDS |
GCTATACCGATTTCGCTTGC+TGG | 0.327789 | 1_4:-37906384 | Msa0161820:CDS |
GCTTGCTGGGAGAGATTTGA+TGG | 0.333161 | 1_4:-37906370 | Msa0161820:CDS |
CGATTATAAGCGGAATCCTT+AGG | 0.336460 | 1_4:-37906302 | Msa0161820:CDS |
TTTCCTGCAACTTGCATTCA+TGG | 0.338462 | 1_4:-37903591 | Msa0161820:CDS |
CAAATTACCTGTATCTCTTT+GGG | 0.339534 | 1_4:+37905679 | None:intergenic |
GGCCGCGCGCCCGGTCAAGC+CGG | 0.340134 | 1_4:-37906850 | Msa0161820:CDS |
GCTTGTGCTCAGACGGGTTC+AGG | 0.340784 | 1_4:-37906348 | Msa0161820:CDS |
GTCAAGGTCGTAGTTGCTTA+TGG | 0.341012 | 1_4:-37906057 | Msa0161820:CDS |
TGTAACAAGTGCTTGGGATT+AGG | 0.346044 | 1_4:-37902133 | None:intergenic |
GGGGAATGGGAGGGAGCGTG+TGG | 0.349109 | 1_4:-37906637 | Msa0161820:CDS |
ACCATACCCTCCGCCATAAC+TGG | 0.352232 | 1_4:+37902161 | None:intergenic |
CACATAATCATCAATGTCAT+TGG | 0.353409 | 1_4:+37902570 | None:intergenic |
GAGGAGGAGCGGGGAATGGG+AGG | 0.354579 | 1_4:-37906647 | Msa0161820:CDS |
AATGGGAGGGAGCGTGTGGG+TGG | 0.354702 | 1_4:-37906633 | Msa0161820:CDS |
TTCTTTGGTGGCCAATGATA+GGG | 0.359261 | 1_4:-37906772 | Msa0161820:CDS |
GGTGGAGGGTACGGTGGTGG+TGG | 0.359516 | 1_4:-37906684 | Msa0161820:CDS |
GTGGCCAATGATAGGGGTTT+GGG | 0.359616 | 1_4:-37906765 | Msa0161820:CDS |
ACATCCGTTGCCACTAGAAT+TGG | 0.361842 | 1_4:+37902649 | None:intergenic |
TGGATTTGCTTGAGAGGGCT+AGG | 0.362367 | 1_4:-37905852 | Msa0161820:CDS |
TGCTTCATCGGCCGCGCGCC+CGG | 0.364359 | 1_4:-37906859 | Msa0161820:CDS |
GGTGGAAACGGTGGTGGTTA+TGG | 0.369732 | 1_4:-37902192 | Msa0161820:CDS |
AACATCACGGCCACCAAAAC+GGG | 0.371256 | 1_4:+37902254 | None:intergenic |
AATAAAGGAAATGATTACTA+TGG | 0.381802 | 1_4:-37902213 | Msa0161820:CDS |
GGAACATAAGCCGGCTTGAC+CGG | 0.382007 | 1_4:+37906840 | None:intergenic |
AGTTATATCTTTCTGGCTGT+TGG | 0.386936 | 1_4:-37903996 | Msa0161820:CDS |
AGGTCTGACTTTAGTGTTTG+TGG | 0.388354 | 1_4:-37903664 | Msa0161820:CDS |
TTTCTGGCTGTTGGAAGGGT+TGG | 0.391022 | 1_4:-37903987 | Msa0161820:CDS |
GTGGTAGAAACAAGCGGACT+GGG | 0.409015 | 1_4:-37902281 | Msa0161820:CDS |
CTAAGGATTCCGCTTATAAT+CGG | 0.410751 | 1_4:+37906303 | None:intergenic |
TCGCCATGAATGCAAGTTGC+AGG | 0.411185 | 1_4:+37903588 | None:intergenic |
TCTCTCCCAGCAAGCGAAAT+CGG | 0.417914 | 1_4:+37906378 | None:intergenic |
AAGGAGAGCTCATATAATAA+AGG | 0.419864 | 1_4:-37902228 | Msa0161820:CDS |
GGGAGGGAGCGTGTGGGTGG+AGG | 0.429438 | 1_4:-37906630 | Msa0161820:CDS |
GGGTTTAACAGAGGAGGAGC+GGG | 0.430268 | 1_4:-37906657 | Msa0161820:CDS |
CACTTATCCTATCCCCTACT+CGG | 0.431850 | 1_4:-37906230 | Msa0161820:CDS |
ATTACCCAAACCCCTATCAT+TGG | 0.432302 | 1_4:+37906761 | None:intergenic |
AGGAGTCCTTGCTGCATAAC+GGG | 0.432387 | 1_4:+37902311 | None:intergenic |
CTCGTCCTGTTCTTCCTATC+CGG | 0.432877 | 1_4:+37902545 | None:intergenic |
GCCAGTTATGGCGGAGGGTA+TGG | 0.434353 | 1_4:-37902162 | Msa0161820:CDS |
GAACACTGCTTGTGTGTTAA+CGG | 0.434525 | 1_4:-37903615 | Msa0161820:CDS |
AACACTGCTTGTGTGTTAAC+GGG | 0.434919 | 1_4:-37903614 | Msa0161820:CDS |
CAAATTACTGTCATTGAAGA+AGG | 0.435697 | 1_4:+37902498 | None:intergenic |
ACAGAGGAGGAGCGGGGAAT+GGG | 0.437491 | 1_4:-37906650 | Msa0161820:CDS |
AAGAAAGATAGTTGAACAAA+TGG | 0.437695 | 1_4:-37905752 | Msa0161820:CDS |
TACTCGGGAGCTCTCTTGTC+AGG | 0.438746 | 1_4:-37906214 | Msa0161820:intron |
ACCAAAGAAGGTGGCTCGGC+CGG | 0.440213 | 1_4:+37906786 | None:intergenic |
TAACATCACGGCCACCAAAA+CGG | 0.440534 | 1_4:+37902253 | None:intergenic |
GTATTCTCTTGCTCAGTAAA+CGG | 0.442152 | 1_4:+37906567 | None:intergenic |
TATGGTGTTCCTGCCAGTTA+TGG | 0.448820 | 1_4:-37902174 | Msa0161820:CDS |
AACATTTCCCAAAGAGATAC+AGG | 0.451243 | 1_4:-37905686 | Msa0161820:intron |
GGCCGAGCCACCTTCTTTGG+TGG | 0.452539 | 1_4:-37906784 | Msa0161820:CDS |
ATATCTTTCTGGCTGTTGGA+AGG | 0.455309 | 1_4:-37903992 | Msa0161820:CDS |
ACAGGACGAGCTGGTAAAAT+GGG | 0.466923 | 1_4:-37902532 | Msa0161820:CDS |
GACAAGAGAGCTCCCGAGTA+GGG | 0.467329 | 1_4:+37906217 | None:intergenic |
GTTTACTGAGCAAGAGAATA+CGG | 0.468139 | 1_4:-37906565 | Msa0161820:CDS |
GATTATAAGCGGAATCCTTA+GGG | 0.468514 | 1_4:-37906301 | Msa0161820:CDS |
AACAGAGGAGGAGCGGGGAA+TGG | 0.469033 | 1_4:-37906651 | Msa0161820:CDS |
TTTGGGGCTGGGAGACAAGT+AGG | 0.470337 | 1_4:-37906705 | Msa0161820:CDS |
GATATTCTGGTGGCAACTCC+AGG | 0.472374 | 1_4:-37905883 | Msa0161820:CDS |
AGCCGGCTTGACCGGGCGCG+CGG | 0.472578 | 1_4:+37906848 | None:intergenic |
GTCAAGGTGTAACAAGTGCT+TGG | 0.472671 | 1_4:-37902140 | Msa0161820:CDS |
TATGCAGCAAGGACTCCTTA+TGG | 0.473458 | 1_4:-37902306 | Msa0161820:CDS |
TGGGGAGAATGTTCCGCCTC+CGG | 0.474987 | 1_4:-37906499 | Msa0161820:CDS |
TAACCGATCAATGGCTGCTC+CGG | 0.476102 | 1_4:-37906805 | Msa0161820:CDS |
TATCTTTCTGGCTGTTGGAA+GGG | 0.484079 | 1_4:-37903991 | Msa0161820:CDS |
TTTGATGGCTTGTGCTCAGA+CGG | 0.484435 | 1_4:-37906355 | Msa0161820:CDS |
CTATCATTGGCCACCAAAGA+AGG | 0.485445 | 1_4:+37906774 | None:intergenic |
GAAGAAAGGTGCTGATGCAT+TGG | 0.489379 | 1_4:-37903637 | Msa0161820:CDS |
GGTGGTAGAAACAAGCGGAC+TGG | 0.489930 | 1_4:-37902282 | Msa0161820:CDS |
AAAGGAAATGATTACTATGG+TGG | 0.493627 | 1_4:-37902210 | Msa0161820:CDS |
CAACTTTGAGAACAGCTACA+TGG | 0.493651 | 1_4:-37906908 | Msa0161820:CDS |
GTCTGTCTCATGCCTGGAGG+AGG | 0.495808 | 1_4:+37905724 | None:intergenic |
GTGCACCGGATAGGAAGAAC+AGG | 0.496326 | 1_4:-37902550 | Msa0161820:CDS |
CTATACCGATTTCGCTTGCT+GGG | 0.497481 | 1_4:-37906383 | Msa0161820:CDS |
GCAGATCGGATGCTGGATAT+GGG | 0.498479 | 1_4:-37905790 | Msa0161820:CDS |
AGGAGGAGCGGGGAATGGGA+GGG | 0.498506 | 1_4:-37906646 | Msa0161820:CDS |
AGCAGCGTCTGTCTCATGCC+TGG | 0.502465 | 1_4:+37905718 | None:intergenic |
GCATAACGGGTGAGCCATGC+AGG | 0.503294 | 1_4:+37902324 | None:intergenic |
TTGTTTCTACCACCACCATA+AGG | 0.503855 | 1_4:+37902291 | None:intergenic |
ACATAATCATCAATGTCATT+GGG | 0.504262 | 1_4:+37902571 | None:intergenic |
CAATGCAGCTAATGCTTCAT+CGG | 0.504871 | 1_4:-37906871 | Msa0161820:CDS |
TTCTTATCAAACAGGGGTCA+AGG | 0.505657 | 1_4:-37906073 | Msa0161820:CDS |
TCATCAACATCATTCTCAAA+CGG | 0.513975 | 1_4:+37906591 | None:intergenic |
GAACATAAGCCGGCTTGACC+GGG | 0.516012 | 1_4:+37906841 | None:intergenic |
AGCAAATCCACCAATCGTCC+TGG | 0.519237 | 1_4:+37905865 | None:intergenic |
GGTATAGCATACCTCTGAAC+CGG | 0.519441 | 1_4:+37906399 | None:intergenic |
AGGAGCACCGATCACCCAAC+AGG | 0.519807 | 1_4:-37906034 | Msa0161820:intron |
GGATTTGCTTGAGAGGGCTA+GGG | 0.520609 | 1_4:-37905851 | Msa0161820:CDS |
GCTGGGAGACAAGTAGGTGG+AGG | 0.520838 | 1_4:-37906699 | Msa0161820:CDS |
GATTGGTGGATTTGCTTGAG+AGG | 0.520897 | 1_4:-37905858 | Msa0161820:CDS |
GGTGGCAACTCCAGGACGAT+TGG | 0.523074 | 1_4:-37905875 | Msa0161820:CDS |
TTCTCCCCACTCGTCTCCAC+AGG | 0.523767 | 1_4:+37906513 | None:intergenic |
GCCTCCGGTGAATACGTTTG+CGG | 0.525176 | 1_4:-37906484 | Msa0161820:CDS |
GCATCTTCGTAACCGATCAA+TGG | 0.526310 | 1_4:-37906814 | Msa0161820:CDS |
TGATGAAGCAGATCGGATGC+TGG | 0.527612 | 1_4:-37905797 | Msa0161820:CDS |
GATGATTATGTGCACCGGAT+AGG | 0.527907 | 1_4:-37902559 | Msa0161820:CDS |
GTAGGTGGAGGGTACGGTGG+TGG | 0.528668 | 1_4:-37906687 | Msa0161820:CDS |
AGAGCTCCCGAGTAGGGGAT+AGG | 0.529713 | 1_4:+37906223 | None:intergenic |
CGGCCGGAGCAGCCATTGAT+CGG | 0.531645 | 1_4:+37906802 | None:intergenic |
CAAATGGACATGCCTCCTCC+AGG | 0.531714 | 1_4:-37905736 | Msa0161820:CDS |
TCAAGGTGTAACAAGTGCTT+GGG | 0.532427 | 1_4:-37902139 | Msa0161820:CDS |
AAGGAGTCCTTGCTGCATAA+CGG | 0.532448 | 1_4:+37902310 | None:intergenic |
GTTCCTGCCAGTTATGGCGG+AGG | 0.540492 | 1_4:-37902168 | Msa0161820:CDS |
AGACAAGTAGGTGGAGGGTA+CGG | 0.541179 | 1_4:-37906693 | Msa0161820:CDS |
GGCCACCAAAGAAGGTGGCT+CGG | 0.542983 | 1_4:+37906782 | None:intergenic |
AGGGGTTTGGGTAATAATTG+GGG | 0.545276 | 1_4:-37906753 | Msa0161820:CDS |
TTGATGGCTTGTGCTCAGAC+GGG | 0.545968 | 1_4:-37906354 | Msa0161820:CDS |
GTGTTTGTGGAAACGAAGAA+AGG | 0.546167 | 1_4:-37903651 | Msa0161820:CDS |
TACCCTCCGCCATAACTGGC+AGG | 0.546471 | 1_4:+37902165 | None:intergenic |
TCTTTGGTGGCCAATGATAG+GGG | 0.549852 | 1_4:-37906771 | Msa0161820:CDS |
AATGATTACTATGGTGGAAA+CGG | 0.551471 | 1_4:-37902204 | Msa0161820:CDS |
GGCAACTCCAGGACGATTGG+TGG | 0.553332 | 1_4:-37905872 | Msa0161820:CDS |
TGGTGGCCGTGATGTTAGGA+AGG | 0.558530 | 1_4:-37902247 | Msa0161820:CDS |
CACTCCAATTCTAGTGGCAA+CGG | 0.558952 | 1_4:-37902653 | Msa0161820:CDS |
TGACAAGAGAAGCCACCTCA+TGG | 0.560777 | 1_4:-37903916 | Msa0161820:CDS |
GCAAGGACTCCTTATGGTGG+TGG | 0.564052 | 1_4:-37902300 | Msa0161820:CDS |
CTCAAAGACCACGTGTGGCA+CGG | 0.564315 | 1_4:-37906269 | Msa0161820:CDS |
ATAGGAAGAACAGGACGAGC+TGG | 0.564587 | 1_4:-37902541 | Msa0161820:CDS |
ATATTCCTGTGGAGACGAGT+GGG | 0.566423 | 1_4:-37906518 | Msa0161820:CDS |
AACTTTGAGAACAGCTACAT+GGG | 0.566954 | 1_4:-37906907 | Msa0161820:CDS |
AAAATAACCTGTTGGGTGAT+CGG | 0.572239 | 1_4:+37906027 | None:intergenic |
GCATTGAGATCATTCAAGAC+TGG | 0.575269 | 1_4:-37902679 | Msa0161820:CDS |
TACTCTTTGAGCAATTAGAT+CGG | 0.575437 | 1_4:+37903956 | None:intergenic |
TTTGAGCATACTGCTCCCTA+AGG | 0.575748 | 1_4:+37906286 | None:intergenic |
TGAAACCGACACCGGTTCAG+AGG | 0.581133 | 1_4:-37906410 | Msa0161820:CDS |
ATTGGTGGATTTGCTTGAGA+GGG | 0.582228 | 1_4:-37905857 | Msa0161820:CDS |
CAGTTGCGGGAGCTTGAGAG+AGG | 0.583458 | 1_4:-37905910 | Msa0161820:CDS |
GGGAATGGGAGGGAGCGTGT+GGG | 0.587644 | 1_4:-37906636 | Msa0161820:CDS |
TACTATGGTGGAAACGGTGG+TGG | 0.589805 | 1_4:-37902198 | Msa0161820:CDS |
GGTGTTCCTGCCAGTTATGG+CGG | 0.592814 | 1_4:-37902171 | Msa0161820:CDS |
AGATGCGGAGGAACATAAGC+CGG | 0.592878 | 1_4:+37906831 | None:intergenic |
TTTCTCTCTGAGCATGAAGG+AGG | 0.593891 | 1_4:+37903892 | None:intergenic |
GGCTCACCCGTTATGCAGCA+AGG | 0.594047 | 1_4:-37902317 | Msa0161820:CDS |
CAGAGAGAAAATGATGTGAA+TGG | 0.597153 | 1_4:-37903879 | Msa0161820:CDS |
GGTAGAAACAAGCGGACTGG+GGG | 0.597859 | 1_4:-37902279 | Msa0161820:CDS |
TTCCTGCCAGTTATGGCGGA+GGG | 0.597902 | 1_4:-37902167 | Msa0161820:CDS |
GGTGGTGGTGGGTTTAACAG+AGG | 0.599981 | 1_4:-37906666 | Msa0161820:CDS |
TTTACTGAGCAAGAGAATAC+GGG | 0.600189 | 1_4:-37906564 | Msa0161820:CDS |
GCAACGGATGTTGCAGCACG+TGG | 0.601102 | 1_4:-37902637 | Msa0161820:CDS |
ATTTCCGCAAACGTATTCAC+CGG | 0.602475 | 1_4:+37906480 | None:intergenic |
GCAAACGTATTCACCGGAGG+CGG | 0.605825 | 1_4:+37906486 | None:intergenic |
TCAAAGAGTAGAATATGTGC+TGG | 0.606920 | 1_4:-37903943 | Msa0161820:CDS |
TGGGTTTAACAGAGGAGGAG+CGG | 0.610620 | 1_4:-37906658 | Msa0161820:CDS |
TGACAAGAGAGCTCCCGAGT+AGG | 0.612221 | 1_4:+37906216 | None:intergenic |
AGAAAATGATGTGAATGGCA+AGG | 0.613108 | 1_4:-37903874 | Msa0161820:intron |
CTGGGAGACAAGTAGGTGGA+GGG | 0.614895 | 1_4:-37906698 | Msa0161820:CDS |
ACAAGAGAGCTCCCGAGTAG+GGG | 0.617221 | 1_4:+37906218 | None:intergenic |
TGGTAGAAACAAGCGGACTG+GGG | 0.618436 | 1_4:-37902280 | Msa0161820:CDS |
GGGGATAGGATAAGTGCGAG+AGG | 0.619384 | 1_4:+37906237 | None:intergenic |
TAGCTCTTGATGAAGCAGAT+CGG | 0.621564 | 1_4:-37905804 | Msa0161820:CDS |
CAAGTAGGTGGAGGGTACGG+TGG | 0.623480 | 1_4:-37906690 | Msa0161820:CDS |
GCATACCTCTGAACCGGTGT+CGG | 0.624694 | 1_4:+37906405 | None:intergenic |
AGCTCTCCTTCCTAACATCA+CGG | 0.629638 | 1_4:+37902241 | None:intergenic |
GAATCGTTGATTAAGAAGCG+TGG | 0.631655 | 1_4:-37906991 | Msa0161820:five_prime_UTR |
TATGGCGGAGGGTATGGTCA+AGG | 0.633849 | 1_4:-37902156 | Msa0161820:CDS |
TATTCCACGTGTAGCACATG+TGG | 0.646595 | 1_4:-37902608 | Msa0161820:CDS |
TCCGCAAACGTATTCACCGG+AGG | 0.646634 | 1_4:+37906483 | None:intergenic |
TGCTTATGATGATATTCCTG+TGG | 0.648043 | 1_4:-37906529 | Msa0161820:CDS |
GTAGTGGAAAATAACCTGTT+GGG | 0.649862 | 1_4:+37906020 | None:intergenic |
CATGAAGGAGGTCCATGAGG+TGG | 0.651399 | 1_4:+37903904 | None:intergenic |
ACATTGATGATTATGTGCAC+CGG | 0.653916 | 1_4:-37902564 | Msa0161820:CDS |
CAAATCAAGAAGTACCTGCA+TGG | 0.655342 | 1_4:-37902338 | Msa0161820:CDS |
GGTTTAACAGAGGAGGAGCG+GGG | 0.655998 | 1_4:-37906656 | Msa0161820:CDS |
TGGAAACACTCCAATTCTAG+TGG | 0.656487 | 1_4:-37902659 | Msa0161820:CDS |
TCATTGGCCACCAAAGAAGG+TGG | 0.656668 | 1_4:+37906777 | None:intergenic |
TAAGCAGTCCGTGCCACACG+TGG | 0.659665 | 1_4:+37906261 | None:intergenic |
ACTTATCCTATCCCCTACTC+GGG | 0.663829 | 1_4:-37906229 | Msa0161820:CDS |
GATATTCCTGTGGAGACGAG+TGG | 0.666031 | 1_4:-37906519 | Msa0161820:CDS |
GGTGGTGGGTTTAACAGAGG+AGG | 0.666655 | 1_4:-37906663 | Msa0161820:CDS |
GTATGCTCAAAGACCACGTG+TGG | 0.668416 | 1_4:-37906274 | Msa0161820:CDS |
ATTGATCGGTTACGAAGATG+CGG | 0.670418 | 1_4:+37906816 | None:intergenic |
GGGGCTGGGAGACAAGTAGG+TGG | 0.673887 | 1_4:-37906702 | Msa0161820:CDS |
TGTTTCACAGATACATGACG+AGG | 0.678920 | 1_4:-37906106 | Msa0161820:intron |
AGCGTCTGTCTCATGCCTGG+AGG | 0.679639 | 1_4:+37905721 | None:intergenic |
GAGCATGAAGGAGGTCCATG+AGG | 0.681402 | 1_4:+37903901 | None:intergenic |
TAAGTATGTGAAACCGACAC+CGG | 0.684063 | 1_4:-37906418 | Msa0161820:CDS |
AAGGTCGTAGTTGCTTATGG+AGG | 0.686644 | 1_4:-37906054 | Msa0161820:CDS |
GCAGCAAGGACTCCTTATGG+TGG | 0.693000 | 1_4:-37902303 | Msa0161820:CDS |
GATCGGTTACGAAGATGCGG+AGG | 0.696419 | 1_4:+37906819 | None:intergenic |
GATTACTATGGTGGAAACGG+TGG | 0.697976 | 1_4:-37902201 | Msa0161820:CDS |
TATTCCTGTGGAGACGAGTG+GGG | 0.710004 | 1_4:-37906517 | Msa0161820:CDS |
GAGAGGTGTTGATATTCTGG+TGG | 0.718235 | 1_4:-37905893 | Msa0161820:CDS |
TTTACCACATGTGCTACACG+TGG | 0.724158 | 1_4:+37902604 | None:intergenic |
ATGGTGGTGGTAGAAACAAG+CGG | 0.731166 | 1_4:-37902287 | Msa0161820:CDS |
TGTGGGTGGAGGAAGACGTG+AGG | 0.745848 | 1_4:-37906619 | Msa0161820:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAATTAATAAAAAATT+AGG | + | chr1_4:37902361-37902380 | None:intergenic | 0.0% |
!!! | ATTTGAGTTTTAAATTTATA+AGG | - | chr1_4:37906466-37906485 | Msa0161820:CDS | 10.0% |
!! | AAACAATAAAAACAAAACAT+TGG | + | chr1_4:37903458-37903477 | None:intergenic | 15.0% |
!!! | TTTTTTATTGAGTTTTAGTA+AGG | - | chr1_4:37903609-37903628 | Msa0161820:CDS | 15.0% |
!!! | ACATACTTTTTACAATAAAT+GGG | + | chr1_4:37904014-37904033 | None:intergenic | 15.0% |
!!! | AACATACTTTTTACAATAAA+TGG | + | chr1_4:37904015-37904034 | None:intergenic | 15.0% |
!!! | TTGTTTCTTTAATTTAGAAT+TGG | - | chr1_4:37904055-37904074 | Msa0161820:intron | 15.0% |
!!! | AAAATAGCTTTTGATTTAAA+AGG | - | chr1_4:37904214-37904233 | Msa0161820:intron | 15.0% |
!!! | AAATAGCTTTTGATTTAAAA+GGG | - | chr1_4:37904215-37904234 | Msa0161820:intron | 15.0% |
!!! | AATTGATTTTTGAAGTATTT+TGG | - | chr1_4:37904506-37904525 | Msa0161820:intron | 15.0% |
!!! | ATGTTAATCTTTACTTATTT+TGG | - | chr1_4:37904656-37904675 | Msa0161820:intron | 15.0% |
!!! | TTTTTGAAATAATTATAGTC+AGG | - | chr1_4:37905248-37905267 | Msa0161820:intron | 15.0% |
!! | TGATAGAATTTAATAACTAA+TGG | + | chr1_4:37906762-37906781 | None:intergenic | 15.0% |
!!! | TTTCAATTTTATTTCAGCTT+AGG | - | chr1_4:37902426-37902445 | Msa0161820:intron | 20.0% |
!!! | TATTGTAAAAAGTATGTTTC+TGG | - | chr1_4:37904017-37904036 | Msa0161820:CDS | 20.0% |
!!! | CTTTAATTTAGAATTGGTAT+AGG | - | chr1_4:37904061-37904080 | Msa0161820:intron | 20.0% |
!!! | AATAGCTTTTGATTTAAAAG+GGG | - | chr1_4:37904216-37904235 | Msa0161820:intron | 20.0% |
!!! | CAATTTGTTTTATTTAACTG+TGG | - | chr1_4:37904243-37904262 | Msa0161820:intron | 20.0% |
!!! | TTAATCTTTACTTATTTTGG+AGG | - | chr1_4:37904659-37904678 | Msa0161820:intron | 20.0% |
!!! | AATGAGACAAATTTTGAATA+TGG | + | chr1_4:37905007-37905026 | None:intergenic | 20.0% |
!! | ATTCAAAATTTGTCTCATTA+AGG | - | chr1_4:37905008-37905027 | Msa0161820:intron | 20.0% |
!! | ATATTATTACATATTACGAG+TGG | - | chr1_4:37905115-37905134 | Msa0161820:intron | 20.0% |
!! | TCTAATTAATTAACAGAGTT+TGG | - | chr1_4:37905428-37905447 | Msa0161820:intron | 20.0% |
!! | AATATCAGATGTTAGTAAAA+AGG | + | chr1_4:37906140-37906159 | None:intergenic | 20.0% |
!!! | AATTTGCGTTTTTTCTTTTT+TGG | - | chr1_4:37906620-37906639 | Msa0161820:CDS | 20.0% |
!!! | ATTTGCGTTTTTTCTTTTTT+GGG | - | chr1_4:37906621-37906640 | Msa0161820:CDS | 20.0% |
!! | AATAAAGGAAATGATTACTA+TGG | - | chr1_4:37907366-37907385 | Msa0161820:five_prime_UTR | 20.0% |
! | AAAATTAGGATTATGCGAAT+CGG | + | chr1_4:37902347-37902366 | None:intergenic | 25.0% |
! | TTCATAATCTGTATATGACT+AGG | - | chr1_4:37903414-37903433 | Msa0161820:intron | 25.0% |
! | TGTTTGATAAGAAAACTTCT+TGG | + | chr1_4:37903499-37903518 | None:intergenic | 25.0% |
!! | AAGAAGTTTTCTTATCAAAC+AGG | - | chr1_4:37903498-37903517 | Msa0161820:intron | 25.0% |
!! | AGAAGTTTTCTTATCAAACA+GGG | - | chr1_4:37903499-37903518 | Msa0161820:intron | 25.0% |
!! | ATACTATTTGATTTCAGTTG+CGG | - | chr1_4:37903655-37903674 | Msa0161820:CDS | 25.0% |
!! | TCAACTATCTTTCTTATTTG+AGG | + | chr1_4:37903822-37903841 | None:intergenic | 25.0% |
! | AAGAAAGATAGTTGAACAAA+TGG | - | chr1_4:37903827-37903846 | Msa0161820:intron | 25.0% |
! | AAAAAAACACAAATGTTCCA+GGG | + | chr1_4:37903978-37903997 | None:intergenic | 25.0% |
! | TAAAAAAACACAAATGTTCC+AGG | + | chr1_4:37903979-37903998 | None:intergenic | 25.0% |
! | TATTGTATGTATTGAATCGA+AGG | + | chr1_4:37904316-37904335 | None:intergenic | 25.0% |
!!! | GTTTGGTTTTGATTGAATTA+AGG | - | chr1_4:37904454-37904473 | Msa0161820:intron | 25.0% |
! | ATAAATAAGACTCAGTTTCA+TGG | + | chr1_4:37904638-37904657 | None:intergenic | 25.0% |
! | TCTATAGATTGATAAGAGTA+TGG | + | chr1_4:37904850-37904869 | None:intergenic | 25.0% |
!! | GTTGAAGAAATAGTTCTTTT+TGG | - | chr1_4:37904973-37904992 | Msa0161820:intron | 25.0% |
! | TTATAGTCAGGATTAAATGA+TGG | - | chr1_4:37905260-37905279 | Msa0161820:intron | 25.0% |
!!! | CTCAATTAAGGATTTTTTTG+TGG | - | chr1_4:37905881-37905900 | Msa0161820:CDS | 25.0% |
!! | AAAACAAAAGAAGCTTCTTT+TGG | + | chr1_4:37906317-37906336 | None:intergenic | 25.0% |
! | AAAAAAAAATCCTCCAAAGT+AGG | + | chr1_4:37906405-37906424 | None:intergenic | 25.0% |
! | AAATTGAAATTTCGAAGCAT+CGG | + | chr1_4:37906605-37906624 | None:intergenic | 25.0% |
! | TGAGCGAATTTAATAACTAA+TGG | + | chr1_4:37906799-37906818 | None:intergenic | 25.0% |
! | AAAAGTCCTAACACAATATT+GGG | + | chr1_4:37906828-37906847 | None:intergenic | 25.0% |
! | ACATAATCATCAATGTCATT+GGG | + | chr1_4:37907011-37907030 | None:intergenic | 25.0% |
AAAAATCTTCATCTCCTTCA+AGG | - | chr1_4:37902287-37902306 | Msa0161820:CDS | 30.0% | |
! | TCGAATTTTAAGCAGGATTT+TGG | - | chr1_4:37902856-37902875 | Msa0161820:intron | 30.0% |
! | CGAATTTTAAGCAGGATTTT+GGG | - | chr1_4:37902857-37902876 | Msa0161820:intron | 30.0% |
! | GAATTTTAAGCAGGATTTTG+GGG | - | chr1_4:37902858-37902877 | Msa0161820:intron | 30.0% |
TCATCAACATCATTCTCAAA+CGG | + | chr1_4:37902991-37903010 | None:intergenic | 30.0% | |
! | TTTTGCTTTCCGATTATAAG+CGG | - | chr1_4:37903267-37903286 | Msa0161820:intron | 30.0% |
! | GAAGTTTTCTTATCAAACAG+GGG | - | chr1_4:37903500-37903519 | Msa0161820:intron | 30.0% |
! | TACTATTTGATTTCAGTTGC+GGG | - | chr1_4:37903656-37903675 | Msa0161820:CDS | 30.0% |
CAAATTACCTGTATCTCTTT+GGG | + | chr1_4:37903903-37903922 | None:intergenic | 30.0% | |
ACAAATTACCTGTATCTCTT+TGG | + | chr1_4:37903904-37903923 | None:intergenic | 30.0% | |
!!! | GACTTGTTATTTTTTGCATG+AGG | - | chr1_4:37903943-37903962 | Msa0161820:CDS | 30.0% |
AATTGAGATTGCCATAATTC+AGG | - | chr1_4:37904117-37904136 | Msa0161820:intron | 30.0% | |
ATGTTCAAACACCTGAATTA+TGG | + | chr1_4:37904131-37904150 | None:intergenic | 30.0% | |
AACATAACTCCAAGATAACT+AGG | + | chr1_4:37904437-37904456 | None:intergenic | 30.0% | |
AGTTATCTTGGAGTTATGTT+TGG | - | chr1_4:37904437-37904456 | Msa0161820:intron | 30.0% | |
CGATACATGATTCAAAAAAG+TGG | - | chr1_4:37904577-37904596 | Msa0161820:intron | 30.0% | |
!!! | TCTTTACTTATTTTGGAGGA+AGG | - | chr1_4:37904663-37904682 | Msa0161820:intron | 30.0% |
!!! | CTTTACTTATTTTGGAGGAA+GGG | - | chr1_4:37904664-37904683 | Msa0161820:intron | 30.0% |
ACCTATTCTAATAATCCTCA+AGG | - | chr1_4:37904781-37904800 | Msa0161820:intron | 30.0% | |
TCCTTGAGGATTATTAGAAT+AGG | + | chr1_4:37904785-37904804 | None:intergenic | 30.0% | |
! | GAACTATTTCTTCAACTCTA+AGG | + | chr1_4:37904969-37904988 | None:intergenic | 30.0% |
CAAAATTTGTCTCATTAAGG+TGG | - | chr1_4:37905011-37905030 | Msa0161820:intron | 30.0% | |
AATGAATGAAGCATGGTTAT+AGG | + | chr1_4:37905171-37905190 | None:intergenic | 30.0% | |
ATAACCATGCTTCATTCATT+TGG | - | chr1_4:37905171-37905190 | Msa0161820:intron | 30.0% | |
!! | AAATGATGGTGATGTAGTTT+TGG | - | chr1_4:37905274-37905293 | Msa0161820:intron | 30.0% |
!! | AATGATGGTGATGTAGTTTT+GGG | - | chr1_4:37905275-37905294 | Msa0161820:intron | 30.0% |
! | GGGATATGTTGAAGTTTTTA+TGG | - | chr1_4:37905296-37905315 | Msa0161820:intron | 30.0% |
TCTTGCTAGTTATATCTTTC+TGG | - | chr1_4:37905576-37905595 | Msa0161820:intron | 30.0% | |
ATTCAAACTTGTACATGTGT+TGG | - | chr1_4:37905755-37905774 | Msa0161820:CDS | 30.0% | |
CACTAACAAAATGTAAACTG+CGG | + | chr1_4:37905781-37905800 | None:intergenic | 30.0% | |
ACAGTCGTTTATTTAAGAGT+AGG | - | chr1_4:37905837-37905856 | Msa0161820:CDS | 30.0% | |
TTTAAGAGTAGGAAGATTTC+TGG | - | chr1_4:37905848-37905867 | Msa0161820:CDS | 30.0% | |
! | ATGTAGAACTTAAAAGCACA+AGG | + | chr1_4:37906164-37906183 | None:intergenic | 30.0% |
CATTCTCAATGAGACTTTAA+CGG | - | chr1_4:37906181-37906200 | Msa0161820:intron | 30.0% | |
ATTCTCAATGAGACTTTAAC+GGG | - | chr1_4:37906182-37906201 | Msa0161820:intron | 30.0% | |
TTCACTATAGTTGAAATGAC+AGG | - | chr1_4:37906335-37906354 | Msa0161820:CDS | 30.0% | |
ATGCGCTAAGAAATTTCAAT+AGG | + | chr1_4:37906524-37906543 | None:intergenic | 30.0% | |
ATTGAAATTTCTTAGCGCAT+TGG | - | chr1_4:37906524-37906543 | Msa0161820:CDS | 30.0% | |
!!! | TTTTTTCTTTTTTGGGTGCA+TGG | - | chr1_4:37906628-37906647 | Msa0161820:CDS | 30.0% |
!!! | TTTTTAGTTGTTGTCAACCA+TGG | - | chr1_4:37906658-37906677 | Msa0161820:CDS | 30.0% |
AATGGAACATCATAATACCA+TGG | + | chr1_4:37906678-37906697 | None:intergenic | 30.0% | |
!! | TATGATGTTCCATTGTTTTG+TGG | - | chr1_4:37906684-37906703 | Msa0161820:CDS | 30.0% |
!! | ATGATGTTCCATTGTTTTGT+GGG | - | chr1_4:37906685-37906704 | Msa0161820:CDS | 30.0% |
ATTCAATTCCCACAAAACAA+TGG | + | chr1_4:37906696-37906715 | None:intergenic | 30.0% | |
CAAAAGTCCTAACACAATAT+TGG | + | chr1_4:37906829-37906848 | None:intergenic | 30.0% | |
AATGTAATTGTTCTGTTTGC+AGG | - | chr1_4:37906866-37906885 | Msa0161820:CDS | 30.0% | |
CACATAATCATCAATGTCAT+TGG | + | chr1_4:37907012-37907031 | None:intergenic | 30.0% | |
CAAATTACTGTCATTGAAGA+AGG | + | chr1_4:37907084-37907103 | None:intergenic | 30.0% | |
! | CAATGACAGTAATTTGTCAA+TGG | - | chr1_4:37907088-37907107 | Msa0161820:intron | 30.0% |
AAGGAGAGCTCATATAATAA+AGG | - | chr1_4:37907351-37907370 | Msa0161820:five_prime_UTR | 30.0% | |
AAAGGAAATGATTACTATGG+TGG | - | chr1_4:37907369-37907388 | Msa0161820:five_prime_UTR | 30.0% | |
! | AATGATTACTATGGTGGAAA+CGG | - | chr1_4:37907375-37907394 | Msa0161820:five_prime_UTR | 30.0% |
!! | TTTGAGAGCGTGTTTTTCAA+AGG | + | chr1_4:37902270-37902289 | None:intergenic | 35.0% |
! | GTTTGGATTTTGTACCTTGA+AGG | + | chr1_4:37902304-37902323 | None:intergenic | 35.0% |
! | AACTTTGAGAACAGCTACAT+GGG | - | chr1_4:37902672-37902691 | Msa0161820:CDS | 35.0% |
ATAGGGGTTTGGGTAATAAT+TGG | - | chr1_4:37902824-37902843 | Msa0161820:intron | 35.0% | |
TAGGGGTTTGGGTAATAATT+GGG | - | chr1_4:37902825-37902844 | Msa0161820:intron | 35.0% | |
! | TAGTTCGTCGAATTTTAAGC+AGG | - | chr1_4:37902849-37902868 | Msa0161820:intron | 35.0% |
GTATTCTCTTGCTCAGTAAA+CGG | + | chr1_4:37903015-37903034 | None:intergenic | 35.0% | |
GTTTACTGAGCAAGAGAATA+CGG | - | chr1_4:37903014-37903033 | Msa0161820:intron | 35.0% | |
TTTACTGAGCAAGAGAATAC+GGG | - | chr1_4:37903015-37903034 | Msa0161820:intron | 35.0% | |
TGCTTATGATGATATTCCTG+TGG | - | chr1_4:37903050-37903069 | Msa0161820:intron | 35.0% | |
ACGTTTGCGGAAATAGATTT+AGG | - | chr1_4:37903108-37903127 | Msa0161820:intron | 35.0% | |
CTAAGGATTCCGCTTATAAT+CGG | + | chr1_4:37903279-37903298 | None:intergenic | 35.0% | |
GATTATAAGCGGAATCCTTA+GGG | - | chr1_4:37903278-37903297 | Msa0161820:intron | 35.0% | |
AAAATAACCTGTTGGGTGAT+CGG | + | chr1_4:37903555-37903574 | None:intergenic | 35.0% | |
! | GTAGTGGAAAATAACCTGTT+GGG | + | chr1_4:37903562-37903581 | None:intergenic | 35.0% |
! | TGTAGTGGAAAATAACCTGT+TGG | + | chr1_4:37903563-37903582 | None:intergenic | 35.0% |
CAAACAAACATTGCATGTAG+TGG | + | chr1_4:37903578-37903597 | None:intergenic | 35.0% | |
AACATTTCCCAAAGAGATAC+AGG | - | chr1_4:37903893-37903912 | Msa0161820:CDS | 35.0% | |
ATACAGAGTAAGATACGTAC+CGG | + | chr1_4:37904371-37904390 | None:intergenic | 35.0% | |
CTAAAACCTCCTAGTTATCT+TGG | - | chr1_4:37904425-37904444 | Msa0161820:intron | 35.0% | |
ATAACTCCAAGATAACTAGG+AGG | + | chr1_4:37904434-37904453 | None:intergenic | 35.0% | |
AGGGTTACTACTATAGTGTA+AGG | - | chr1_4:37904683-37904702 | Msa0161820:intron | 35.0% | |
CTATAGTGTAAGGATTGAAC+AGG | - | chr1_4:37904693-37904712 | Msa0161820:intron | 35.0% | |
! | ATAATCCTCAAGGAAAGTGT+AGG | - | chr1_4:37904791-37904810 | Msa0161820:intron | 35.0% |
CAATCTATAGAACCTCAATC+TGG | - | chr1_4:37904859-37904878 | Msa0161820:intron | 35.0% | |
!! | TTGTTTTTCTGCCAACATCA+AGG | + | chr1_4:37904889-37904908 | None:intergenic | 35.0% |
ATAACAGAGTCAGACACAAT+TGG | + | chr1_4:37905054-37905073 | None:intergenic | 35.0% | |
! | CTCTGTTATGTGGACTAATA+TGG | - | chr1_4:37905065-37905084 | Msa0161820:intron | 35.0% |
!! | ATGATGGTGATGTAGTTTTG+GGG | - | chr1_4:37905276-37905295 | Msa0161820:intron | 35.0% |
GTCATAGAAACTGTTTGCTT+AGG | - | chr1_4:37905378-37905397 | Msa0161820:intron | 35.0% | |
!! | AGTTATATCTTTCTGGCTGT+TGG | - | chr1_4:37905583-37905602 | Msa0161820:intron | 35.0% |
TCAAAGAGTAGAATATGTGC+TGG | - | chr1_4:37905636-37905655 | Msa0161820:intron | 35.0% | |
CAGAGAGAAAATGATGTGAA+TGG | - | chr1_4:37905700-37905719 | Msa0161820:CDS | 35.0% | |
AGAAAATGATGTGAATGGCA+AGG | - | chr1_4:37905705-37905724 | Msa0161820:CDS | 35.0% | |
ATTCAAAAACTATGCTGCAC+TGG | - | chr1_4:37905813-37905832 | Msa0161820:CDS | 35.0% | |
!! | GGTTTTGTCACACTCAATTA+AGG | - | chr1_4:37905869-37905888 | Msa0161820:CDS | 35.0% |
! | TTTTTGTGGTTTTTGCAGCA+AGG | - | chr1_4:37905895-37905914 | Msa0161820:CDS | 35.0% |
TTCTCAATGAGACTTTAACG+GGG | - | chr1_4:37906183-37906202 | Msa0161820:intron | 35.0% | |
AGTTTATACTGCCACAGAAA+TGG | - | chr1_4:37906258-37906277 | Msa0161820:CDS | 35.0% | |
GTTTATACTGCCACAGAAAT+GGG | - | chr1_4:37906259-37906278 | Msa0161820:CDS | 35.0% | |
!! | AAGAAGCTTCTTTTGGAAGA+GGG | + | chr1_4:37906310-37906329 | None:intergenic | 35.0% |
!! | AAAGAAGCTTCTTTTGGAAG+AGG | + | chr1_4:37906311-37906330 | None:intergenic | 35.0% |
AAAATCCTCCAAAGTAGGAA+GGG | + | chr1_4:37906400-37906419 | None:intergenic | 35.0% | |
AAAAATCCTCCAAAGTAGGA+AGG | + | chr1_4:37906401-37906420 | None:intergenic | 35.0% | |
GTGGGAATTGAATTTCTCTA+TGG | - | chr1_4:37906703-37906722 | Msa0161820:CDS | 35.0% | |
AGCTTTCCCAATATTGTGTT+AGG | - | chr1_4:37906819-37906838 | Msa0161820:CDS | 35.0% | |
! | ACATTGATGATTATGTGCAC+CGG | - | chr1_4:37907015-37907034 | Msa0161820:five_prime_UTR | 35.0% |
GAATCGGATAAGATTGAAGG+AGG | + | chr1_4:37902331-37902350 | None:intergenic | 40.0% | |
TGCGAATCGGATAAGATTGA+AGG | + | chr1_4:37902334-37902353 | None:intergenic | 40.0% | |
! | GAATCGTTGATTAAGAAGCG+TGG | - | chr1_4:37902588-37902607 | Msa0161820:CDS | 40.0% |
! | CAACTTTGAGAACAGCTACA+TGG | - | chr1_4:37902671-37902690 | Msa0161820:CDS | 40.0% |
CAATGCAGCTAATGCTTCAT+CGG | - | chr1_4:37902708-37902727 | Msa0161820:intron | 40.0% | |
ATTGATCGGTTACGAAGATG+CGG | + | chr1_4:37902766-37902785 | None:intergenic | 40.0% | |
! | TTCTTTGGTGGCCAATGATA+GGG | - | chr1_4:37902807-37902826 | Msa0161820:intron | 40.0% |
ATTACCCAAACCCCTATCAT+TGG | + | chr1_4:37902821-37902840 | None:intergenic | 40.0% | |
AGGGGTTTGGGTAATAATTG+GGG | - | chr1_4:37902826-37902845 | Msa0161820:intron | 40.0% | |
ATTTCCGCAAACGTATTCAC+CGG | + | chr1_4:37903102-37903121 | None:intergenic | 40.0% | |
TAAGTATGTGAAACCGACAC+CGG | - | chr1_4:37903161-37903180 | Msa0161820:intron | 40.0% | |
CGATTATAAGCGGAATCCTT+AGG | - | chr1_4:37903277-37903296 | Msa0161820:intron | 40.0% | |
TGTTTCACAGATACATGACG+AGG | - | chr1_4:37903473-37903492 | Msa0161820:intron | 40.0% | |
TTCTTATCAAACAGGGGTCA+AGG | - | chr1_4:37903506-37903525 | Msa0161820:intron | 40.0% | |
!! | TGAGAGAGGTGTTGATATTC+TGG | - | chr1_4:37903683-37903702 | Msa0161820:intron | 40.0% |
!! | ATTGGTGGATTTGCTTGAGA+GGG | - | chr1_4:37903722-37903741 | Msa0161820:intron | 40.0% |
TAGCTCTTGATGAAGCAGAT+CGG | - | chr1_4:37903775-37903794 | Msa0161820:intron | 40.0% | |
AAAACACAAATGTTCCAGGG+AGG | + | chr1_4:37903975-37903994 | None:intergenic | 40.0% | |
! | TCAAGGTTGGCTATTTGTTG+GGG | + | chr1_4:37904184-37904203 | None:intergenic | 40.0% |
! | CTCAAGGTTGGCTATTTGTT+GGG | + | chr1_4:37904185-37904204 | None:intergenic | 40.0% |
! | TCTCAAGGTTGGCTATTTGT+TGG | + | chr1_4:37904186-37904205 | None:intergenic | 40.0% |
AAATAGCCAACCTTGAGAGT+AGG | - | chr1_4:37904188-37904207 | Msa0161820:intron | 40.0% | |
AATAGCCAACCTTGAGAGTA+GGG | - | chr1_4:37904189-37904208 | Msa0161820:intron | 40.0% | |
!! | CTATTTTTCCCCTACTCTCA+AGG | + | chr1_4:37904201-37904220 | None:intergenic | 40.0% |
TGTATTGCAAAACACCCAAC+TGG | - | chr1_4:37904386-37904405 | Msa0161820:intron | 40.0% | |
AAACACCCAACTGGTGAATA+TGG | - | chr1_4:37904395-37904414 | Msa0161820:intron | 40.0% | |
CCTTACCATATTCACCAGTT+GGG | + | chr1_4:37904403-37904422 | None:intergenic | 40.0% | |
CCAACTGGTGAATATGGTAA+GGG | - | chr1_4:37904401-37904420 | Msa0161820:intron | 40.0% | |
GAATAGGTTGTCGCTAAACA+CGG | + | chr1_4:37904769-37904788 | None:intergenic | 40.0% | |
CTATAGAACCTCAATCTGGA+TGG | - | chr1_4:37904863-37904882 | Msa0161820:intron | 40.0% | |
TGTCTCATTAAGGTGGAAAG+CGG | - | chr1_4:37905018-37905037 | Msa0161820:intron | 40.0% | |
TTGTGTCTGACTCTGTTATG+TGG | - | chr1_4:37905055-37905074 | Msa0161820:intron | 40.0% | |
CTGCAGTGCATTCAAATGAA+GGG | + | chr1_4:37905539-37905558 | None:intergenic | 40.0% | |
TCTGCAGTGCATTCAAATGA+AGG | + | chr1_4:37905540-37905559 | None:intergenic | 40.0% | |
!! | ATATCTTTCTGGCTGTTGGA+AGG | - | chr1_4:37905587-37905606 | Msa0161820:intron | 40.0% |
!! | TATCTTTCTGGCTGTTGGAA+GGG | - | chr1_4:37905588-37905607 | Msa0161820:intron | 40.0% |
! | CATTTTCTCTCTGAGCATGA+AGG | + | chr1_4:37905693-37905712 | None:intergenic | 40.0% |
AGGTCTGACTTTAGTGTTTG+TGG | - | chr1_4:37905915-37905934 | Msa0161820:intron | 40.0% | |
GTGTTTGTGGAAACGAAGAA+AGG | - | chr1_4:37905928-37905947 | Msa0161820:intron | 40.0% | |
GAACACTGCTTGTGTGTTAA+CGG | - | chr1_4:37905964-37905983 | Msa0161820:intron | 40.0% | |
AACACTGCTTGTGTGTTAAC+GGG | - | chr1_4:37905965-37905984 | Msa0161820:intron | 40.0% | |
TTTCCTGCAACTTGCATTCA+TGG | - | chr1_4:37905988-37906007 | Msa0161820:intron | 40.0% | |
!! | TTTTGGAAGAGGGGGAAATT+AGG | + | chr1_4:37906300-37906319 | None:intergenic | 40.0% |
!! | AGAAGCTTCTTTTGGAAGAG+GGG | + | chr1_4:37906309-37906328 | None:intergenic | 40.0% |
! | GATGGGCTTTCATGGTAATT+TGG | + | chr1_4:37906363-37906382 | None:intergenic | 40.0% |
TCTTAGCGCATTGGATATGT+AGG | - | chr1_4:37906533-37906552 | Msa0161820:CDS | 40.0% | |
!! | GCATCGGTTCTATGGTTTAA+TGG | + | chr1_4:37906589-37906608 | None:intergenic | 40.0% |
!! | ATTTCGAAGCATCGGTTCTA+TGG | + | chr1_4:37906597-37906616 | None:intergenic | 40.0% |
!!! | TTTCTTTTTTGGGTGCATGG+TGG | - | chr1_4:37906631-37906650 | Msa0161820:CDS | 40.0% |
GCATTGAGATCATTCAAGAC+TGG | - | chr1_4:37906900-37906919 | Msa0161820:CDS | 40.0% | |
TGGAAACACTCCAATTCTAG+TGG | - | chr1_4:37906920-37906939 | Msa0161820:exon | 40.0% | |
!! | CAAATCAAGAAGTACCTGCA+TGG | - | chr1_4:37907241-37907260 | Msa0161820:intron | 40.0% |
!! | TTGTTTCTACCACCACCATA+AGG | + | chr1_4:37907291-37907310 | None:intergenic | 40.0% |
TCAAGGTGTAACAAGTGCTT+GGG | - | chr1_4:37907440-37907459 | Msa0161820:five_prime_UTR | 40.0% | |
! | TGCGCAACAAAAAGCGTGTT+TGG | - | chr1_4:37902162-37902181 | Msa0161820:CDS | 45.0% |
AGATTGAAGGAGGAGAGGTT+TGG | + | chr1_4:37902321-37902340 | None:intergenic | 45.0% | |
GGATAAGATTGAAGGAGGAG+AGG | + | chr1_4:37902326-37902345 | None:intergenic | 45.0% | |
GCATCTTCGTAACCGATCAA+TGG | - | chr1_4:37902765-37902784 | Msa0161820:intron | 45.0% | |
CTATCATTGGCCACCAAAGA+AGG | + | chr1_4:37902808-37902827 | None:intergenic | 45.0% | |
! | CTTCTTTGGTGGCCAATGAT+AGG | - | chr1_4:37902806-37902825 | Msa0161820:intron | 45.0% |
! | TCTTTGGTGGCCAATGATAG+GGG | - | chr1_4:37902808-37902827 | Msa0161820:intron | 45.0% |
!!! | TTTAAGCAGGATTTTGGGGC+TGG | - | chr1_4:37902862-37902881 | Msa0161820:intron | 45.0% |
!!! | TTAAGCAGGATTTTGGGGCT+GGG | - | chr1_4:37902863-37902882 | Msa0161820:intron | 45.0% |
ATATTCCTGTGGAGACGAGT+GGG | - | chr1_4:37903061-37903080 | Msa0161820:intron | 45.0% | |
GGTATAGCATACCTCTGAAC+CGG | + | chr1_4:37903183-37903202 | None:intergenic | 45.0% | |
!! | CTATACCGATTTCGCTTGCT+GGG | - | chr1_4:37903196-37903215 | Msa0161820:intron | 45.0% |
! | TTTGATGGCTTGTGCTCAGA+CGG | - | chr1_4:37903224-37903243 | Msa0161820:intron | 45.0% |
TTTGAGCATACTGCTCCCTA+AGG | + | chr1_4:37903296-37903315 | None:intergenic | 45.0% | |
CACTTATCCTATCCCCTACT+CGG | - | chr1_4:37903349-37903368 | Msa0161820:intron | 45.0% | |
ACTTATCCTATCCCCTACTC+GGG | - | chr1_4:37903350-37903369 | Msa0161820:intron | 45.0% | |
GTCAAGGTCGTAGTTGCTTA+TGG | - | chr1_4:37903522-37903541 | Msa0161820:intron | 45.0% | |
AAGGTCGTAGTTGCTTATGG+AGG | - | chr1_4:37903525-37903544 | Msa0161820:intron | 45.0% | |
!! | GAGAGGTGTTGATATTCTGG+TGG | - | chr1_4:37903686-37903705 | Msa0161820:intron | 45.0% |
!! | GATTGGTGGATTTGCTTGAG+AGG | - | chr1_4:37903721-37903740 | Msa0161820:intron | 45.0% |
TAACGTCACTTCTGTACTCG+TGG | - | chr1_4:37904093-37904112 | Msa0161820:intron | 45.0% | |
ATAGCCAACCTTGAGAGTAG+GGG | - | chr1_4:37904190-37904209 | Msa0161820:intron | 45.0% | |
! | TTTTCCCCTACTCTCAAGGT+TGG | + | chr1_4:37904197-37904216 | None:intergenic | 45.0% |
GATACGAAAACACCCATCAC+CGG | - | chr1_4:37904349-37904368 | Msa0161820:intron | 45.0% | |
! | GTAAGATACGTACCGGTGAT+GGG | + | chr1_4:37904364-37904383 | None:intergenic | 45.0% |
! | AGTAAGATACGTACCGGTGA+TGG | + | chr1_4:37904365-37904384 | None:intergenic | 45.0% |
CCCAACTGGTGAATATGGTA+AGG | - | chr1_4:37904400-37904419 | Msa0161820:intron | 45.0% | |
CCCTTACCATATTCACCAGT+TGG | + | chr1_4:37904404-37904423 | None:intergenic | 45.0% | |
! | GGAAAGTGTAGGCGTGAATT+TGG | - | chr1_4:37904802-37904821 | Msa0161820:intron | 45.0% |
! | AATCTGGATGGCCTTGATGT+TGG | - | chr1_4:37904875-37904894 | Msa0161820:intron | 45.0% |
CCTGCCAAATGAATGAAGCA+TGG | + | chr1_4:37905178-37905197 | None:intergenic | 45.0% | |
CCATGCTTCATTCATTTGGC+AGG | - | chr1_4:37905175-37905194 | Msa0161820:intron | 45.0% | |
TTTCTCTCTGAGCATGAAGG+AGG | + | chr1_4:37905690-37905709 | None:intergenic | 45.0% | |
TGAATAGCAGCAGTATGCAG+AGG | + | chr1_4:37905740-37905759 | None:intergenic | 45.0% | |
!! | GAAGAAAGGTGCTGATGCAT+TGG | - | chr1_4:37905942-37905961 | Msa0161820:intron | 45.0% |
ACTGCCACAGAAATGGGATT+TGG | - | chr1_4:37906265-37906284 | Msa0161820:CDS | 45.0% | |
GAAGCCAAATCCCATTTCTG+TGG | + | chr1_4:37906272-37906291 | None:intergenic | 45.0% | |
!! | GAAGCTTCTTTTGGAAGAGG+GGG | + | chr1_4:37906308-37906327 | None:intergenic | 45.0% |
! | GTGAAAGAGATGGGCTTTCA+TGG | + | chr1_4:37906371-37906390 | None:intergenic | 45.0% |
CACTCCAATTCTAGTGGCAA+CGG | - | chr1_4:37906926-37906945 | Msa0161820:exon | 45.0% | |
ACATCCGTTGCCACTAGAAT+TGG | + | chr1_4:37906933-37906952 | None:intergenic | 45.0% | |
TATTCCACGTGTAGCACATG+TGG | - | chr1_4:37906971-37906990 | Msa0161820:five_prime_UTR | 45.0% | |
TTTACCACATGTGCTACACG+TGG | + | chr1_4:37906978-37906997 | None:intergenic | 45.0% | |
GATGATTATGTGCACCGGAT+AGG | - | chr1_4:37907020-37907039 | Msa0161820:five_prime_UTR | 45.0% | |
AACAGGACGAGCTGGTAAAA+TGG | - | chr1_4:37907046-37907065 | Msa0161820:intron | 45.0% | |
ACAGGACGAGCTGGTAAAAT+GGG | - | chr1_4:37907047-37907066 | Msa0161820:intron | 45.0% | |
TCTTGCATCAGATCAGCCAA+TGG | + | chr1_4:37907219-37907238 | None:intergenic | 45.0% | |
ATTGGCTGATCTGATGCAAG+AGG | - | chr1_4:37907218-37907237 | Msa0161820:intron | 45.0% | |
AAGGAGTCCTTGCTGCATAA+CGG | + | chr1_4:37907272-37907291 | None:intergenic | 45.0% | |
TATGCAGCAAGGACTCCTTA+TGG | - | chr1_4:37907273-37907292 | Msa0161820:intron | 45.0% | |
!! | ATGGTGGTGGTAGAAACAAG+CGG | - | chr1_4:37907292-37907311 | Msa0161820:intron | 45.0% |
TAACATCACGGCCACCAAAA+CGG | + | chr1_4:37907329-37907348 | None:intergenic | 45.0% | |
AGCTCTCCTTCCTAACATCA+CGG | + | chr1_4:37907341-37907360 | None:intergenic | 45.0% | |
! | GATTACTATGGTGGAAACGG+TGG | - | chr1_4:37907378-37907397 | Msa0161820:five_prime_UTR | 45.0% |
TATGGTGTTCCTGCCAGTTA+TGG | - | chr1_4:37907405-37907424 | Msa0161820:five_prime_UTR | 45.0% | |
GTCAAGGTGTAACAAGTGCT+TGG | - | chr1_4:37907439-37907458 | Msa0161820:five_prime_UTR | 45.0% | |
!!! | AATATTATTTTAAAACAATT+TGG | + | chr1_4:37905100-37905119 | None:intergenic | 5.0% |
AGATGCGGAGGAACATAAGC+CGG | + | chr1_4:37902751-37902770 | None:intergenic | 50.0% | |
TAACCGATCAATGGCTGCTC+CGG | - | chr1_4:37902774-37902793 | Msa0161820:intron | 50.0% | |
TCATTGGCCACCAAAGAAGG+TGG | + | chr1_4:37902805-37902824 | None:intergenic | 50.0% | |
GTGGCCAATGATAGGGGTTT+GGG | - | chr1_4:37902814-37902833 | Msa0161820:intron | 50.0% | |
AGACAAGTAGGTGGAGGGTA+CGG | - | chr1_4:37902886-37902905 | Msa0161820:intron | 50.0% | |
TGGGTTTAACAGAGGAGGAG+CGG | - | chr1_4:37902921-37902940 | Msa0161820:intron | 50.0% | |
GATATTCCTGTGGAGACGAG+TGG | - | chr1_4:37903060-37903079 | Msa0161820:intron | 50.0% | |
TATTCCTGTGGAGACGAGTG+GGG | - | chr1_4:37903062-37903081 | Msa0161820:intron | 50.0% | |
!! | GCTATACCGATTTCGCTTGC+TGG | - | chr1_4:37903195-37903214 | Msa0161820:intron | 50.0% |
TCTCTCCCAGCAAGCGAAAT+CGG | + | chr1_4:37903204-37903223 | None:intergenic | 50.0% | |
! | GCTTGCTGGGAGAGATTTGA+TGG | - | chr1_4:37903209-37903228 | Msa0161820:intron | 50.0% |
! | TTGATGGCTTGTGCTCAGAC+GGG | - | chr1_4:37903225-37903244 | Msa0161820:intron | 50.0% |
GTATGCTCAAAGACCACGTG+TGG | - | chr1_4:37903305-37903324 | Msa0161820:intron | 50.0% | |
GATATTCTGGTGGCAACTCC+AGG | - | chr1_4:37903696-37903715 | Msa0161820:intron | 50.0% | |
AGCAAATCCACCAATCGTCC+TGG | + | chr1_4:37903717-37903736 | None:intergenic | 50.0% | |
! | TGGATTTGCTTGAGAGGGCT+AGG | - | chr1_4:37903727-37903746 | Msa0161820:intron | 50.0% |
! | GGATTTGCTTGAGAGGGCTA+GGG | - | chr1_4:37903728-37903747 | Msa0161820:intron | 50.0% |
TGATGAAGCAGATCGGATGC+TGG | - | chr1_4:37903782-37903801 | Msa0161820:intron | 50.0% | |
AGCAGATCGGATGCTGGATA+TGG | - | chr1_4:37903788-37903807 | Msa0161820:intron | 50.0% | |
GCAGATCGGATGCTGGATAT+GGG | - | chr1_4:37903789-37903808 | Msa0161820:intron | 50.0% | |
GTGGAAATCCTGCTCTGTCA+TGG | - | chr1_4:37904262-37904281 | Msa0161820:intron | 50.0% | |
ATGCATGACCATGACAGAGC+AGG | + | chr1_4:37904273-37904292 | None:intergenic | 50.0% | |
TCACGCCTACACTTTCCTTG+AGG | + | chr1_4:37904799-37904818 | None:intergenic | 50.0% | |
CATCAAGGCCATCCAGATTG+AGG | + | chr1_4:37904874-37904893 | None:intergenic | 50.0% | |
!! | TTTCTGGCTGTTGGAAGGGT+TGG | - | chr1_4:37905592-37905611 | Msa0161820:intron | 50.0% |
TGACAAGAGAAGCCACCTCA+TGG | - | chr1_4:37905663-37905682 | Msa0161820:intron | 50.0% | |
TCGCCATGAATGCAAGTTGC+AGG | + | chr1_4:37905994-37906013 | None:intergenic | 50.0% | |
! | GGGAGCATGGTGAAAGAGAT+GGG | + | chr1_4:37906380-37906399 | None:intergenic | 50.0% |
! | AGGGAGCATGGTGAAAGAGA+TGG | + | chr1_4:37906381-37906400 | None:intergenic | 50.0% |
ACCATGCTCCCTTCCTACTT+TGG | - | chr1_4:37906389-37906408 | Msa0161820:CDS | 50.0% | |
TCCAAAGTAGGAAGGGAGCA+TGG | + | chr1_4:37906393-37906412 | None:intergenic | 50.0% | |
ATGCTCCCTTCCTACTTTGG+AGG | - | chr1_4:37906392-37906411 | Msa0161820:CDS | 50.0% | |
CTCGTCCTGTTCTTCCTATC+CGG | + | chr1_4:37907037-37907056 | None:intergenic | 50.0% | |
ATAGGAAGAACAGGACGAGC+TGG | - | chr1_4:37907038-37907057 | Msa0161820:intron | 50.0% | |
AGGAGTCCTTGCTGCATAAC+GGG | + | chr1_4:37907271-37907290 | None:intergenic | 50.0% | |
! | GTGGTAGAAACAAGCGGACT+GGG | - | chr1_4:37907298-37907317 | Msa0161820:five_prime_UTR | 50.0% |
!! | TGGTAGAAACAAGCGGACTG+GGG | - | chr1_4:37907299-37907318 | Msa0161820:five_prime_UTR | 50.0% |
AACATCACGGCCACCAAAAC+GGG | + | chr1_4:37907328-37907347 | None:intergenic | 50.0% | |
!! | GTTTTGGTGGCCGTGATGTT+AGG | - | chr1_4:37907328-37907347 | Msa0161820:five_prime_UTR | 50.0% |
! | TACTATGGTGGAAACGGTGG+TGG | - | chr1_4:37907381-37907400 | Msa0161820:five_prime_UTR | 50.0% |
!! | GAACATAAGCCGGCTTGACC+GGG | + | chr1_4:37902741-37902760 | None:intergenic | 55.0% |
!! | GGAACATAAGCCGGCTTGAC+CGG | + | chr1_4:37902742-37902761 | None:intergenic | 55.0% |
GATCGGTTACGAAGATGCGG+AGG | + | chr1_4:37902763-37902782 | None:intergenic | 55.0% | |
GGTGGCCAATGATAGGGGTT+TGG | - | chr1_4:37902813-37902832 | Msa0161820:intron | 55.0% | |
! | TTTGGGGCTGGGAGACAAGT+AGG | - | chr1_4:37902874-37902893 | Msa0161820:intron | 55.0% |
CTGGGAGACAAGTAGGTGGA+GGG | - | chr1_4:37902881-37902900 | Msa0161820:intron | 55.0% | |
!! | GGTGGTGGTGGGTTTAACAG+AGG | - | chr1_4:37902913-37902932 | Msa0161820:intron | 55.0% |
!! | GGTGGTGGGTTTAACAGAGG+AGG | - | chr1_4:37902916-37902935 | Msa0161820:intron | 55.0% |
GGGTTTAACAGAGGAGGAGC+GGG | - | chr1_4:37902922-37902941 | Msa0161820:intron | 55.0% | |
GGTTTAACAGAGGAGGAGCG+GGG | - | chr1_4:37902923-37902942 | Msa0161820:intron | 55.0% | |
GCAAACGTATTCACCGGAGG+CGG | + | chr1_4:37903096-37903115 | None:intergenic | 55.0% | |
GCCTCCGGTGAATACGTTTG+CGG | - | chr1_4:37903095-37903114 | Msa0161820:intron | 55.0% | |
TCCGCAAACGTATTCACCGG+AGG | + | chr1_4:37903099-37903118 | None:intergenic | 55.0% | |
!! | TGAAACCGACACCGGTTCAG+AGG | - | chr1_4:37903169-37903188 | Msa0161820:intron | 55.0% |
GCATACCTCTGAACCGGTGT+CGG | + | chr1_4:37903177-37903196 | None:intergenic | 55.0% | |
CTCAAAGACCACGTGTGGCA+CGG | - | chr1_4:37903310-37903329 | Msa0161820:intron | 55.0% | |
GGGGATAGGATAAGTGCGAG+AGG | + | chr1_4:37903345-37903364 | None:intergenic | 55.0% | |
ACAAGAGAGCTCCCGAGTAG+GGG | + | chr1_4:37903364-37903383 | None:intergenic | 55.0% | |
GACAAGAGAGCTCCCGAGTA+GGG | + | chr1_4:37903365-37903384 | None:intergenic | 55.0% | |
TGACAAGAGAGCTCCCGAGT+AGG | + | chr1_4:37903366-37903385 | None:intergenic | 55.0% | |
TACTCGGGAGCTCTCTTGTC+AGG | - | chr1_4:37903365-37903384 | Msa0161820:intron | 55.0% | |
GGGAGCTCTCTTGTCAGGTT+GGG | - | chr1_4:37903370-37903389 | Msa0161820:intron | 55.0% | |
! | GGAGCTCTCTTGTCAGGTTG+GGG | - | chr1_4:37903371-37903390 | Msa0161820:intron | 55.0% |
CAAATGGACATGCCTCCTCC+AGG | - | chr1_4:37903843-37903862 | Msa0161820:intron | 55.0% | |
CATGAAGGAGGTCCATGAGG+TGG | + | chr1_4:37905678-37905697 | None:intergenic | 55.0% | |
GAGCATGAAGGAGGTCCATG+AGG | + | chr1_4:37905681-37905700 | None:intergenic | 55.0% | |
GTGCACCGGATAGGAAGAAC+AGG | - | chr1_4:37907029-37907048 | Msa0161820:intron | 55.0% | |
GCAGCAAGGACTCCTTATGG+TGG | - | chr1_4:37907276-37907295 | Msa0161820:intron | 55.0% | |
GCAAGGACTCCTTATGGTGG+TGG | - | chr1_4:37907279-37907298 | Msa0161820:intron | 55.0% | |
GGTGGTAGAAACAAGCGGAC+TGG | - | chr1_4:37907297-37907316 | Msa0161820:five_prime_UTR | 55.0% | |
!! | GGTAGAAACAAGCGGACTGG+GGG | - | chr1_4:37907300-37907319 | Msa0161820:five_prime_UTR | 55.0% |
TGGTGGCCGTGATGTTAGGA+AGG | - | chr1_4:37907332-37907351 | Msa0161820:five_prime_UTR | 55.0% | |
! | GGTGGAAACGGTGGTGGTTA+TGG | - | chr1_4:37907387-37907406 | Msa0161820:five_prime_UTR | 55.0% |
GGTGTTCCTGCCAGTTATGG+CGG | - | chr1_4:37907408-37907427 | Msa0161820:five_prime_UTR | 55.0% | |
! | TTCCTGCCAGTTATGGCGGA+GGG | - | chr1_4:37907412-37907431 | Msa0161820:five_prime_UTR | 55.0% |
ACCATACCCTCCGCCATAAC+TGG | + | chr1_4:37907421-37907440 | None:intergenic | 55.0% | |
! | TATGGCGGAGGGTATGGTCA+AGG | - | chr1_4:37907423-37907442 | Msa0161820:five_prime_UTR | 55.0% |
! | ACCAAAGAAGGTGGCTCGGC+CGG | + | chr1_4:37902796-37902815 | None:intergenic | 60.0% |
GGCCACCAAAGAAGGTGGCT+CGG | + | chr1_4:37902800-37902819 | None:intergenic | 60.0% | |
GCTGGGAGACAAGTAGGTGG+AGG | - | chr1_4:37902880-37902899 | Msa0161820:intron | 60.0% | |
! | CAAGTAGGTGGAGGGTACGG+TGG | - | chr1_4:37902889-37902908 | Msa0161820:intron | 60.0% |
AACAGAGGAGGAGCGGGGAA+TGG | - | chr1_4:37902928-37902947 | Msa0161820:intron | 60.0% | |
ACAGAGGAGGAGCGGGGAAT+GGG | - | chr1_4:37902929-37902948 | Msa0161820:intron | 60.0% | |
TGTGGGTGGAGGAAGACGTG+AGG | - | chr1_4:37902960-37902979 | Msa0161820:intron | 60.0% | |
TTCTCCCCACTCGTCTCCAC+AGG | + | chr1_4:37903069-37903088 | None:intergenic | 60.0% | |
TGGGGAGAATGTTCCGCCTC+CGG | - | chr1_4:37903080-37903099 | Msa0161820:intron | 60.0% | |
! | GCTTGTGCTCAGACGGGTTC+AGG | - | chr1_4:37903231-37903250 | Msa0161820:intron | 60.0% |
TAAGCAGTCCGTGCCACACG+TGG | + | chr1_4:37903321-37903340 | None:intergenic | 60.0% | |
AGAGCTCCCGAGTAGGGGAT+AGG | + | chr1_4:37903359-37903378 | None:intergenic | 60.0% | |
CGGGAGCTCTCTTGTCAGGT+TGG | - | chr1_4:37903369-37903388 | Msa0161820:intron | 60.0% | |
!! | AGGAGCACCGATCACCCAAC+AGG | - | chr1_4:37903545-37903564 | Msa0161820:intron | 60.0% |
CAGTTGCGGGAGCTTGAGAG+AGG | - | chr1_4:37903669-37903688 | Msa0161820:CDS | 60.0% | |
GGTGGCAACTCCAGGACGAT+TGG | - | chr1_4:37903704-37903723 | Msa0161820:intron | 60.0% | |
GGCAACTCCAGGACGATTGG+TGG | - | chr1_4:37903707-37903726 | Msa0161820:intron | 60.0% | |
GTCTGTCTCATGCCTGGAGG+AGG | + | chr1_4:37903858-37903877 | None:intergenic | 60.0% | |
AGCGTCTGTCTCATGCCTGG+AGG | + | chr1_4:37903861-37903880 | None:intergenic | 60.0% | |
AGCAGCGTCTGTCTCATGCC+TGG | + | chr1_4:37903864-37903883 | None:intergenic | 60.0% | |
GCATGAGGATCTGTCCTCCC+TGG | - | chr1_4:37903958-37903977 | Msa0161820:CDS | 60.0% | |
GCAACGGATGTTGCAGCACG+TGG | - | chr1_4:37906942-37906961 | Msa0161820:five_prime_UTR | 60.0% | |
!! | GCATAACGGGTGAGCCATGC+AGG | + | chr1_4:37907258-37907277 | None:intergenic | 60.0% |
GGCTCACCCGTTATGCAGCA+AGG | - | chr1_4:37907262-37907281 | Msa0161820:intron | 60.0% | |
GTTCCTGCCAGTTATGGCGG+AGG | - | chr1_4:37907411-37907430 | Msa0161820:five_prime_UTR | 60.0% | |
TACCCTCCGCCATAACTGGC+AGG | + | chr1_4:37907417-37907436 | None:intergenic | 60.0% | |
! | GCCAGTTATGGCGGAGGGTA+TGG | - | chr1_4:37907417-37907436 | Msa0161820:five_prime_UTR | 60.0% |
CGGCCGGAGCAGCCATTGAT+CGG | + | chr1_4:37902780-37902799 | None:intergenic | 65.0% | |
TCCGGCCGAGCCACCTTCTT+TGG | - | chr1_4:37902792-37902811 | Msa0161820:intron | 65.0% | |
GGCCGAGCCACCTTCTTTGG+TGG | - | chr1_4:37902795-37902814 | Msa0161820:intron | 65.0% | |
GGGGCTGGGAGACAAGTAGG+TGG | - | chr1_4:37902877-37902896 | Msa0161820:intron | 65.0% | |
! | GTAGGTGGAGGGTACGGTGG+TGG | - | chr1_4:37902892-37902911 | Msa0161820:intron | 65.0% |
!! | GGTACGGTGGTGGTGGTGGT+GGG | - | chr1_4:37902902-37902921 | Msa0161820:intron | 65.0% |
AGGAGGAGCGGGGAATGGGA+GGG | - | chr1_4:37902933-37902952 | Msa0161820:intron | 65.0% | |
! | GGGAATGGGAGGGAGCGTGT+GGG | - | chr1_4:37902943-37902962 | Msa0161820:intron | 65.0% |
! | AATGGGAGGGAGCGTGTGGG+TGG | - | chr1_4:37902946-37902965 | Msa0161820:intron | 65.0% |
! | ACTGGGGGAGCCCGTTTTGG+TGG | - | chr1_4:37907315-37907334 | Msa0161820:five_prime_UTR | 65.0% |
! | GGTGGAGGGTACGGTGGTGG+TGG | - | chr1_4:37902895-37902914 | Msa0161820:intron | 70.0% |
!! | GGAGGGTACGGTGGTGGTGG+TGG | - | chr1_4:37902898-37902917 | Msa0161820:intron | 70.0% |
!! | GGGTACGGTGGTGGTGGTGG+TGG | - | chr1_4:37902901-37902920 | Msa0161820:intron | 70.0% |
GAGGAGGAGCGGGGAATGGG+AGG | - | chr1_4:37902932-37902951 | Msa0161820:intron | 70.0% | |
! | GGGGAATGGGAGGGAGCGTG+TGG | - | chr1_4:37902942-37902961 | Msa0161820:intron | 70.0% |
!! | CGGACTGGGGGAGCCCGTTT+TGG | - | chr1_4:37907312-37907331 | Msa0161820:five_prime_UTR | 70.0% |
TGCTTCATCGGCCGCGCGCC+CGG | - | chr1_4:37902720-37902739 | Msa0161820:intron | 75.0% | |
! | GGGAGGGAGCGTGTGGGTGG+AGG | - | chr1_4:37902949-37902968 | Msa0161820:intron | 75.0% |
!!! | AGCCGGCTTGACCGGGCGCG+CGG | + | chr1_4:37902734-37902753 | None:intergenic | 80.0% |
! | GGCCGCGCGCCCGGTCAAGC+CGG | - | chr1_4:37902729-37902748 | Msa0161820:intron | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 37902134 | 37907467 | 37902134 | ID=Msa0161820;Name=Msa0161820 |
chr1_4 | mRNA | 37902134 | 37907467 | 37902134 | ID=Msa0161820-mRNA-1;Parent=Msa0161820;Name=Msa0161820-mRNA-1;_AED=0.17;_eAED=0.17;_QI=281|0.85|0.75|1|0.85|0.75|8|0|589 |
chr1_4 | exon | 37902134 | 37902363 | 37902134 | ID=Msa0161820-mRNA-1:exon:11099;Parent=Msa0161820-mRNA-1 |
chr1_4 | exon | 37902506 | 37902713 | 37902506 | ID=Msa0161820-mRNA-1:exon:11098;Parent=Msa0161820-mRNA-1 |
chr1_4 | exon | 37903575 | 37903688 | 37903575 | ID=Msa0161820-mRNA-1:exon:11097;Parent=Msa0161820-mRNA-1 |
chr1_4 | exon | 37903875 | 37904042 | 37903875 | ID=Msa0161820-mRNA-1:exon:11096;Parent=Msa0161820-mRNA-1 |
chr1_4 | exon | 37905687 | 37905929 | 37905687 | ID=Msa0161820-mRNA-1:exon:11095;Parent=Msa0161820-mRNA-1 |
chr1_4 | exon | 37906035 | 37906118 | 37906035 | ID=Msa0161820-mRNA-1:exon:11094;Parent=Msa0161820-mRNA-1 |
chr1_4 | exon | 37906215 | 37907043 | 37906215 | ID=Msa0161820-mRNA-1:exon:11093;Parent=Msa0161820-mRNA-1 |
chr1_4 | exon | 37907293 | 37907467 | 37907293 | ID=Msa0161820-mRNA-1:exon:11092;Parent=Msa0161820-mRNA-1 |
chr1_4 | five_prime_UTR | 37907293 | 37907467 | 37907293 | ID=Msa0161820-mRNA-1:five_prime_utr;Parent=Msa0161820-mRNA-1 |
chr1_4 | five_prime_UTR | 37906938 | 37907043 | 37906938 | ID=Msa0161820-mRNA-1:five_prime_utr;Parent=Msa0161820-mRNA-1 |
chr1_4 | CDS | 37906215 | 37906937 | 37906215 | ID=Msa0161820-mRNA-1:cds;Parent=Msa0161820-mRNA-1 |
chr1_4 | CDS | 37906035 | 37906118 | 37906035 | ID=Msa0161820-mRNA-1:cds;Parent=Msa0161820-mRNA-1 |
chr1_4 | CDS | 37905687 | 37905929 | 37905687 | ID=Msa0161820-mRNA-1:cds;Parent=Msa0161820-mRNA-1 |
chr1_4 | CDS | 37903875 | 37904042 | 37903875 | ID=Msa0161820-mRNA-1:cds;Parent=Msa0161820-mRNA-1 |
chr1_4 | CDS | 37903575 | 37903688 | 37903575 | ID=Msa0161820-mRNA-1:cds;Parent=Msa0161820-mRNA-1 |
chr1_4 | CDS | 37902506 | 37902713 | 37902506 | ID=Msa0161820-mRNA-1:cds;Parent=Msa0161820-mRNA-1 |
chr1_4 | CDS | 37902134 | 37902363 | 37902134 | ID=Msa0161820-mRNA-1:cds;Parent=Msa0161820-mRNA-1 |
Gene Sequence |
Protein sequence |