Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227080 | XP_024631173.1 | 88.717 | 452 | 3 | 2 | 1 | 404 | 1 | 452 | 0.0 | 789 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227080 | sp|Q5ZLK1|DCA13_CHICK | 45.618 | 445 | 201 | 2 | 1 | 404 | 1 | 445 | 2.03e-146 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003360 | Msa1227080 | 0.927671 | 8.493112e-92 | -8.615850e-47 |
| Msa0040220 | Msa1227080 | 0.827306 | 1.682889e-54 | -8.615850e-47 |
| Msa0050860 | Msa1227080 | 0.938032 | 1.312680e-98 | -8.615850e-47 |
| Msa0708630 | Msa1227080 | 0.801279 | 9.704479e-49 | -8.615850e-47 |
| Msa0790450 | Msa1227080 | 0.802231 | 6.187926e-49 | -8.615850e-47 |
| Msa0132460 | Msa1227080 | 0.802084 | 6.635283e-49 | -8.615850e-47 |
| Msa0134580 | Msa1227080 | 0.835065 | 2.083928e-56 | -8.615850e-47 |
| Msa0146580 | Msa1227080 | 0.901624 | 2.219974e-78 | -8.615850e-47 |
| Msa0182050 | Msa1227080 | 0.805416 | 1.348857e-49 | -8.615850e-47 |
| Msa0194940 | Msa1227080 | 0.804726 | 1.880858e-49 | -8.615850e-47 |
| Msa1227080 | Msa1450560 | 0.810141 | 1.336106e-50 | -8.615850e-47 |
| Msa0426090 | Msa1227080 | 0.833049 | 6.666423e-56 | -8.615850e-47 |
| Msa0426250 | Msa1227080 | 0.838530 | 2.722622e-57 | -8.615850e-47 |
| Msa0472480 | Msa1227080 | 0.829754 | 4.312328e-55 | -8.615850e-47 |
| Msa0475810 | Msa1227080 | 0.832486 | 9.197879e-56 | -8.615850e-47 |
| Msa1083370 | Msa1227080 | 0.809624 | 1.725679e-50 | -8.615850e-47 |
| Msa0547920 | Msa1227080 | 0.801984 | 6.955264e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227080 | MtrunA17_Chr1g0155601 | 88.717 | 452 | 3 | 2 | 1 | 404 | 1 | 452 | 0.0 | 789 |
| Msa1227080 | MtrunA17_Chr1g0185501 | 24.206 | 252 | 147 | 9 | 95 | 311 | 26 | 268 | 7.16e-13 | 68.9 |
| Msa1227080 | MtrunA17_Chr4g0067151 | 22.553 | 235 | 146 | 6 | 91 | 315 | 73 | 281 | 3.78e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227080 | AT4G28450.1 | 71.460 | 452 | 81 | 2 | 1 | 404 | 1 | 452 | 0.0 | 680 |
| Msa1227080 | AT4G02730.1 | 24.221 | 289 | 168 | 11 | 56 | 319 | 31 | 293 | 2.74e-15 | 77.0 |
| Msa1227080 | AT2G22040.1 | 25.940 | 266 | 148 | 10 | 73 | 318 | 58 | 294 | 3.44e-11 | 64.3 |
| Msa1227080 | AT3G49660.1 | 20.332 | 241 | 156 | 7 | 89 | 319 | 64 | 278 | 4.37e-11 | 63.9 |
| Msa1227080 | AT3G49660.1 | 24.454 | 229 | 151 | 6 | 95 | 319 | 23 | 233 | 4.53e-11 | 63.9 |
Find 132 sgRNAs with CRISPR-Local
Find 435 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTACCACTGTAAAATTTA+TGG | 0.088636 | 8_2:-2177831 | None:intergenic |
| GAAATTGAAAAGAAAGATTT+AGG | 0.137973 | 8_2:+2179418 | Msa1227080:three_prime_UTR |
| TAGTTATGATTCCAGGAAAT+TGG | 0.212222 | 8_2:+2178000 | Msa1227080:CDS |
| GTGCCTGTAGCGTTTCTTTA+TGG | 0.227292 | 8_2:-2178919 | None:intergenic |
| CGGTGGTGCACACAGGGGTT+AGG | 0.235953 | 8_2:-2173200 | None:intergenic |
| CTGCTGTGACCACCATTATA+AGG | 0.244087 | 8_2:-2178309 | None:intergenic |
| CTTACCACTGTAAAATTTAT+GGG | 0.253800 | 8_2:-2177830 | None:intergenic |
| TGTGCCAATGCAAGAAATTT+TGG | 0.255111 | 8_2:+2179290 | Msa1227080:three_prime_UTR |
| ATAACTGGGCTTGCTCTCTA+TGG | 0.278986 | 8_2:-2173102 | None:intergenic |
| TCCAAGTTGTTCTGATGCTT+TGG | 0.306051 | 8_2:-2178618 | None:intergenic |
| GGGCTTGCTCTCTATGGTTT+AGG | 0.307858 | 8_2:-2173096 | None:intergenic |
| CCATCCATTGCTCCTATAAA+AGG | 0.319195 | 8_2:-2173923 | None:intergenic |
| GATGGAAGTTATGTAATTTC+AGG | 0.319874 | 8_2:+2178563 | Msa1227080:CDS |
| TTTGGCTTCACCCAATTTCC+TGG | 0.320487 | 8_2:-2178011 | None:intergenic |
| CCAAGCTATAGAATTGGTTT+TGG | 0.322631 | 8_2:-2177795 | None:intergenic |
| TGTTTGCAGATATTCGTCTT+TGG | 0.331813 | 8_2:+2175772 | Msa1227080:intron |
| CCCCATACGAAACTATTTAC+TGG | 0.333180 | 8_2:-2176831 | None:intergenic |
| GCTGAGCTTGCTAAGAGATT+TGG | 0.339438 | 8_2:-2176894 | None:intergenic |
| GTTTGCAGATATTCGTCTTT+GGG | 0.344881 | 8_2:+2175773 | Msa1227080:intron |
| TTCTCTTGAGGACGAAGAAT+TGG | 0.350486 | 8_2:-2173725 | None:intergenic |
| GGCTTTGTTGTAACACTCCC+TGG | 0.358324 | 8_2:-2179071 | None:intergenic |
| GTGATCTTTATGAACACATT+TGG | 0.359886 | 8_2:-2178029 | None:intergenic |
| GTGGCGCTCAAGTAGATATA+TGG | 0.375359 | 8_2:+2176692 | Msa1227080:CDS |
| AGAACGAAGCCAAGACCTTC+AGG | 0.381853 | 8_2:+2173563 | Msa1227080:CDS |
| CGCACAGCACCTTGGTGTCC+AGG | 0.391819 | 8_2:-2176171 | None:intergenic |
| AAATTGAAAAGAAAGATTTA+GGG | 0.397767 | 8_2:+2179419 | Msa1227080:three_prime_UTR |
| TACACCAAAATTTCTTGCAT+TGG | 0.399910 | 8_2:-2179294 | None:intergenic |
| AAAGAAGAAGCCTTGTATAT+TGG | 0.402396 | 8_2:-2178987 | None:intergenic |
| GCATAAATCTGTATGATTTA+CGG | 0.406292 | 8_2:+2177487 | Msa1227080:CDS |
| TGGATTCCAAGCTATAGAAT+TGG | 0.408247 | 8_2:-2177801 | None:intergenic |
| GTAAAATTTATGGGTTCCAT+TGG | 0.408971 | 8_2:-2177821 | None:intergenic |
| GCTAAGAGATTTGGTTCTCC+TGG | 0.410192 | 8_2:-2176885 | None:intergenic |
| CAGGGGTTAGGGTTCGGAAT+TGG | 0.410437 | 8_2:-2173188 | None:intergenic |
| ACTGCTATAGTTATGATTCC+AGG | 0.417229 | 8_2:+2177993 | Msa1227080:CDS |
| ATGATACTAACCTCAGACTT+TGG | 0.421940 | 8_2:+2178591 | Msa1227080:CDS |
| GAAGAATTGGATCGTAATTA+CGG | 0.423302 | 8_2:-2173712 | None:intergenic |
| GGATTGGCGGTGGTGCACAC+AGG | 0.426225 | 8_2:-2173207 | None:intergenic |
| AGTTATGATTCCAGGAAATT+GGG | 0.427023 | 8_2:+2178001 | Msa1227080:CDS |
| AATGAATTACCTGAAGGTCT+TGG | 0.427414 | 8_2:-2173572 | None:intergenic |
| GGTGGTGCACACAGGGGTTA+GGG | 0.430634 | 8_2:-2173199 | None:intergenic |
| AGGAAAGCTCACAGTGCCCC+AGG | 0.436680 | 8_2:+2179053 | Msa1227080:CDS |
| GGCCATCTGTCGATGCTGTC+AGG | 0.439615 | 8_2:-2176197 | None:intergenic |
| GGCGGTGAGCTGTGGTGGAT+TGG | 0.439996 | 8_2:-2173223 | None:intergenic |
| TGCACACAGGGGTTAGGGTT+CGG | 0.441760 | 8_2:-2173194 | None:intergenic |
| GTGAGAATCTTCCCTTATAA+TGG | 0.443627 | 8_2:+2178297 | Msa1227080:CDS |
| TGCTGTGACCACCATTATAA+GGG | 0.445472 | 8_2:-2178308 | None:intergenic |
| TCCTCCGTTCGCCGTTGTAA+AGG | 0.448837 | 8_2:+2173259 | Msa1227080:five_prime_UTR |
| TGTTACAACAAAGCCGTTGC+GGG | 0.449730 | 8_2:+2179079 | Msa1227080:CDS |
| GAAGCCTTGTATATTGGTCT+TGG | 0.453460 | 8_2:-2178981 | None:intergenic |
| AAATCTTCAATTCAATCAAA+AGG | 0.456369 | 8_2:+2179396 | Msa1227080:three_prime_UTR |
| TGTTGAAGGTGAACTGAACT+AGG | 0.456544 | 8_2:-2173129 | None:intergenic |
| TAGATATATGGAATCACAAC+AGG | 0.461587 | 8_2:+2176704 | Msa1227080:CDS |
| GATTGGCGGTGGTGCACACA+GGG | 0.462317 | 8_2:-2173206 | None:intergenic |
| TGTAGATGCAATTTCGTGTA+TGG | 0.462793 | 8_2:+2173949 | Msa1227080:CDS |
| CCAAAACCAATTCTATAGCT+TGG | 0.466953 | 8_2:+2177795 | Msa1227080:CDS |
| CTTGCAATACGGTTAACTTC+AGG | 0.470144 | 8_2:-2178945 | None:intergenic |
| TGCTCTCAATGCAGTGAAGT+TGG | 0.475144 | 8_2:+2173766 | Msa1227080:CDS |
| GATATTGACTACTCACCAAC+TGG | 0.479569 | 8_2:+2178152 | Msa1227080:CDS |
| ATTTCTGTCCGCTTTAATCC+AGG | 0.483582 | 8_2:+2176867 | Msa1227080:CDS |
| TGTGTCAAGTTCAGCGGCGA+TGG | 0.483997 | 8_2:+2178545 | Msa1227080:CDS |
| AACTGTTCTATCATAAGATC+CGG | 0.487930 | 8_2:-2178189 | None:intergenic |
| AGCCAGTAAATAGTTTCGTA+TGG | 0.495618 | 8_2:+2176829 | Msa1227080:CDS |
| ATAATTCTTCTTTCCCGCAA+CGG | 0.501061 | 8_2:-2179092 | None:intergenic |
| CAATGCAGTGAAGTTGGATA+AGG | 0.505068 | 8_2:+2173772 | Msa1227080:CDS |
| TGAGCGGCGGTGAGCTGTGG+TGG | 0.509257 | 8_2:-2173228 | None:intergenic |
| CAAAGTTATATCACGCTCTA+CGG | 0.510796 | 8_2:+2173527 | Msa1227080:CDS |
| GCTTTGTTGTAACACTCCCT+GGG | 0.513233 | 8_2:-2179070 | None:intergenic |
| GGCCGCATTCTTGTTTCATG+TGG | 0.514047 | 8_2:+2176216 | Msa1227080:CDS |
| TTAGGGTTCGGAATTGGCAG+AGG | 0.514464 | 8_2:-2173182 | None:intergenic |
| GCCAGTAAATAGTTTCGTAT+GGG | 0.521326 | 8_2:+2176830 | Msa1227080:CDS |
| GGTGAGCTGTGGTGGATTGG+CGG | 0.521355 | 8_2:-2173220 | None:intergenic |
| TAGCGCTGTTGATCACCAAT+GGG | 0.521520 | 8_2:+2176648 | Msa1227080:intron |
| AGTAAGGAAAATGATAATGA+TGG | 0.524836 | 8_2:+2177521 | Msa1227080:CDS |
| CGGACTGTTTGTCAGTTCCC+TGG | 0.530233 | 8_2:+2176153 | Msa1227080:CDS |
| TCAGGCCTCGCACAGCACCT+TGG | 0.533050 | 8_2:-2176179 | None:intergenic |
| CAAAATGCTCGCCGTCCCAT+TGG | 0.535842 | 8_2:-2176663 | None:intergenic |
| CAATATATATATTTATGAAG+TGG | 0.537187 | 8_2:+2179163 | Msa1227080:three_prime_UTR |
| ATTATCAGAGAAGTTGAGTG+AGG | 0.539555 | 8_2:+2179110 | Msa1227080:CDS |
| TTCTATAGCTTGGAATCCAA+TGG | 0.540411 | 8_2:+2177805 | Msa1227080:CDS |
| AGTGTCTATGCCTTGCAATA+CGG | 0.542864 | 8_2:-2178956 | None:intergenic |
| GGTTCGGAATTGGCAGAGGA+TGG | 0.545542 | 8_2:-2173178 | None:intergenic |
| TATTCCACCGCCTTCTCTTG+AGG | 0.547207 | 8_2:-2173737 | None:intergenic |
| TTAGCGCTGTTGATCACCAA+TGG | 0.548979 | 8_2:+2176647 | Msa1227080:intron |
| GGCCTGACAGCATCGACAGA+TGG | 0.550525 | 8_2:+2176195 | Msa1227080:CDS |
| TTTCGTATGGGGATCAGATA+CGG | 0.552827 | 8_2:+2176842 | Msa1227080:CDS |
| ACATCGCATAACATCGGCTC+CGG | 0.555583 | 8_2:+2173149 | Msa1227080:five_prime_UTR |
| GGCATGCAGGCAAATGAAGA+TGG | 0.559590 | 8_2:+2177968 | Msa1227080:intron |
| CTTTGGCCTTCCAAAGTCTG+AGG | 0.561645 | 8_2:-2178601 | None:intergenic |
| GCCAAAGCATCAGAACAACT+TGG | 0.571500 | 8_2:+2178617 | Msa1227080:CDS |
| TACGGATGGATACCCCAGTA+AGG | 0.575067 | 8_2:+2177505 | Msa1227080:CDS |
| TGGCAGAGGATGGTGCTAGC+CGG | 0.578600 | 8_2:-2173168 | None:intergenic |
| GTGTTACAACAAAGCCGTTG+CGG | 0.579532 | 8_2:+2179078 | Msa1227080:CDS |
| GAGCTGTGGTGGATTGGCGG+TGG | 0.580519 | 8_2:-2173217 | None:intergenic |
| CAATGAGCGGCGGTGAGCTG+TGG | 0.581863 | 8_2:-2173231 | None:intergenic |
| GCACAGCACCTTGGTGTCCA+GGG | 0.584408 | 8_2:-2176170 | None:intergenic |
| GGACACCAAGGTGCTGTGCG+AGG | 0.590155 | 8_2:+2176174 | Msa1227080:CDS |
| TACTAACCTCAGACTTTGGA+AGG | 0.594251 | 8_2:+2178595 | Msa1227080:CDS |
| AGGCCATAAAGAAACGCTAC+AGG | 0.594578 | 8_2:+2178916 | Msa1227080:CDS |
| CTTACCAAGACCAATATACA+AGG | 0.596333 | 8_2:+2178977 | Msa1227080:CDS |
| TGTCAGTTCCCTGGACACCA+AGG | 0.601209 | 8_2:+2176162 | Msa1227080:CDS |
| CACACCTTTACAACGGCGAA+CGG | 0.605066 | 8_2:-2173263 | None:intergenic |
| GGAAAGCTCACAGTGCCCCA+GGG | 0.606954 | 8_2:+2179054 | Msa1227080:CDS |
| AATTCTTCGTCCTCAAGAGA+AGG | 0.607045 | 8_2:+2173727 | Msa1227080:CDS |
| CTGAAGTTAACCGTATTGCA+AGG | 0.608965 | 8_2:+2178946 | Msa1227080:CDS |
| ATCTCTTAGCAAGCTCAGCT+AGG | 0.612178 | 8_2:+2176898 | Msa1227080:CDS |
| ATCATACTAAAAGAATGCAA+AGG | 0.613308 | 8_2:+2178340 | Msa1227080:CDS |
| TCGTCCTCAAGAGAAGGCGG+TGG | 0.613718 | 8_2:+2173733 | Msa1227080:CDS |
| GTGACAAATTCTCGACCAGT+TGG | 0.617530 | 8_2:-2178167 | None:intergenic |
| CCGATGTTATGCGATGTTGA+AGG | 0.618493 | 8_2:-2173143 | None:intergenic |
| TTGGTTCTCCTGGATTAAAG+CGG | 0.621177 | 8_2:-2176875 | None:intergenic |
| GTCTTTGGGATATAGCTGCT+AGG | 0.627694 | 8_2:+2175787 | Msa1227080:CDS |
| TGATGCCACAGGTTCTTCCG+AGG | 0.628636 | 8_2:+2178868 | Msa1227080:intron |
| AGAATCTTCCCTTATAATGG+TGG | 0.629250 | 8_2:+2178300 | Msa1227080:CDS |
| ACCTTTACAACGGCGAACGG+AGG | 0.630519 | 8_2:-2173260 | None:intergenic |
| AAATCTGTATGATTTACGGA+TGG | 0.631713 | 8_2:+2177491 | Msa1227080:CDS |
| ATCTACTTGAGCGCCACCTG+TGG | 0.634797 | 8_2:-2176686 | None:intergenic |
| GATGCCACAGGTTCTTCCGA+GGG | 0.636446 | 8_2:+2178869 | Msa1227080:intron |
| ATATATGCACACCTTTACAA+CGG | 0.636759 | 8_2:-2173270 | None:intergenic |
| CCAGTAAATAGTTTCGTATG+GGG | 0.638122 | 8_2:+2176831 | Msa1227080:CDS |
| GTATTCTGTGTCAAGTTCAG+CGG | 0.646929 | 8_2:+2178539 | Msa1227080:CDS |
| ACTGGTCGAGAATTTGTCAC+CGG | 0.649767 | 8_2:+2178170 | Msa1227080:CDS |
| AGTTATATCACGCTCTACGG+AGG | 0.657642 | 8_2:+2173530 | Msa1227080:CDS |
| GCTGTTGATCACCAATGGGA+CGG | 0.667148 | 8_2:+2176652 | Msa1227080:CDS |
| CCTTCAACATCGCATAACAT+CGG | 0.670795 | 8_2:+2173143 | Msa1227080:five_prime_UTR |
| ATTGGCGGTGGTGCACACAG+GGG | 0.672431 | 8_2:-2173205 | None:intergenic |
| CAATACGGTTAACTTCAGGA+AGG | 0.681036 | 8_2:-2178941 | None:intergenic |
| TCTTCGTCCTCAAGAGAAGG+CGG | 0.682148 | 8_2:+2173730 | Msa1227080:CDS |
| TTCCACATGAAACAAGAATG+CGG | 0.692579 | 8_2:-2176218 | None:intergenic |
| ACGGAGGAAGTAGCAATGAG+CGG | 0.696929 | 8_2:-2173244 | None:intergenic |
| CTTTGTTGTAACACTCCCTG+GGG | 0.701621 | 8_2:-2179069 | None:intergenic |
| GAGGAAGTAGCAATGAGCGG+CGG | 0.735597 | 8_2:-2173241 | None:intergenic |
| GAAGAAGCATGACTATCACG+AGG | 0.736007 | 8_2:+2178896 | Msa1227080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGTTTTTTTTTTTTTTTG+TGG | + | chr8_2:2173882-2173901 | Msa1227080:intron | 10.0% |
| !! | AAATAAATAAGAAATTAGAA+TGG | + | chr8_2:2174422-2174441 | Msa1227080:intron | 10.0% |
| !!! | TAATTATGATATATTTTAAC+TGG | + | chr8_2:2174871-2174890 | Msa1227080:intron | 10.0% |
| !!! | AATTATGATATATTTTAACT+GGG | + | chr8_2:2174872-2174891 | Msa1227080:intron | 10.0% |
| !!! | TTTTTTGTAAAATTTTCTTT+TGG | + | chr8_2:2176453-2176472 | Msa1227080:intron | 10.0% |
| !! | TAATCAAAAGAAAAATAATA+AGG | - | chr8_2:2177634-2177653 | None:intergenic | 10.0% |
| !!! | TTTATTTATCATTTTGTGAT+AGG | - | chr8_2:2173390-2173409 | None:intergenic | 15.0% |
| !!! | TATTGTGAATATGATTTTAT+AGG | + | chr8_2:2173821-2173840 | Msa1227080:intron | 15.0% |
| !!! | ATATGTATAAACTATTTCTA+TGG | + | chr8_2:2174078-2174097 | Msa1227080:intron | 15.0% |
| !!! | TTTTAAATCAATCTATCAAA+TGG | - | chr8_2:2174392-2174411 | None:intergenic | 15.0% |
| !!! | GATTGATTTAAAATGATATT+TGG | + | chr8_2:2174399-2174418 | Msa1227080:intron | 15.0% |
| !!! | ACAATTTTCAAAATATAAGT+TGG | + | chr8_2:2174759-2174778 | Msa1227080:intron | 15.0% |
| !!! | ACAAGATTATTTTAGTTTAA+AGG | + | chr8_2:2174832-2174851 | Msa1227080:intron | 15.0% |
| !! | AATTTACCAAAATTAAAGTT+TGG | - | chr8_2:2175010-2175029 | None:intergenic | 15.0% |
| !! | GTTAATATAGTAGTTTAAAA+CGG | - | chr8_2:2175738-2175757 | None:intergenic | 15.0% |
| !!! | CATTTAAAATTGAAAGAAAA+AGG | - | chr8_2:2175822-2175841 | None:intergenic | 15.0% |
| !!! | TAATATTGTCATTTTGTTTA+TGG | + | chr8_2:2176122-2176141 | Msa1227080:intron | 15.0% |
| !! | GATTATATAATTAACACTAA+GGG | + | chr8_2:2176966-2176985 | Msa1227080:intron | 15.0% |
| !! | ATTATATAATTAACACTAAG+GGG | + | chr8_2:2176967-2176986 | Msa1227080:intron | 15.0% |
| !!! | GGTTTTTATTTAGTTAAATA+TGG | + | chr8_2:2177307-2177326 | Msa1227080:intron | 15.0% |
| !!! | GAACTGATTTATATTTATTT+TGG | + | chr8_2:2177378-2177397 | Msa1227080:intron | 15.0% |
| !!! | ATTATCATTAGTTTAAATCA+TGG | + | chr8_2:2177560-2177579 | Msa1227080:intron | 15.0% |
| !! | TTGTAATTATTATTAAACTG+AGG | + | chr8_2:2177607-2177626 | Msa1227080:intron | 15.0% |
| !! | TAAGAATATTTCAATAAACT+CGG | - | chr8_2:2178478-2178497 | None:intergenic | 15.0% |
| !! | CAATATATATATTTATGAAG+TGG | + | chr8_2:2179163-2179182 | Msa1227080:three_prime_UTR | 15.0% |
| !! | AAATTGAAAAGAAAGATTTA+GGG | + | chr8_2:2179419-2179438 | Msa1227080:three_prime_UTR | 15.0% |
| !! | TTCACAATAAAAAACACATA+GGG | - | chr8_2:2173810-2173829 | None:intergenic | 20.0% |
| !! | ATTCACAATAAAAAACACAT+AGG | - | chr8_2:2173811-2173830 | None:intergenic | 20.0% |
| !!! | TGAATATGATTTTATAGGAT+AGG | + | chr8_2:2173826-2173845 | Msa1227080:intron | 20.0% |
| !! | AAAAATTTAGAAGAGAAGAT+AGG | + | chr8_2:2174353-2174372 | Msa1227080:intron | 20.0% |
| !! | AAAATTTAGAAGAGAAGATA+GGG | + | chr8_2:2174354-2174373 | Msa1227080:intron | 20.0% |
| !! | ATAAGAAATTAGAATGGTTA+TGG | + | chr8_2:2174428-2174447 | Msa1227080:intron | 20.0% |
| !!! | TTCTAGTTAACATTTCTTTA+AGG | + | chr8_2:2175039-2175058 | Msa1227080:intron | 20.0% |
| !! | TCTAGTTAACATTTCTTTAA+GGG | + | chr8_2:2175040-2175059 | Msa1227080:intron | 20.0% |
| !!! | ATCTAAACAATTTTGTTTAC+AGG | - | chr8_2:2175115-2175134 | None:intergenic | 20.0% |
| !!! | TTTGAAGATTCTTTAGTTTT+GGG | - | chr8_2:2175283-2175302 | None:intergenic | 20.0% |
| !!! | ATTTGAAGATTCTTTAGTTT+TGG | - | chr8_2:2175284-2175303 | None:intergenic | 20.0% |
| !! | TAAAGAATCTTCAAATTACA+GGG | + | chr8_2:2175288-2175307 | Msa1227080:intron | 20.0% |
| !! | CCAGTAAAAAAAAATTGTTT+CGG | - | chr8_2:2175320-2175339 | None:intergenic | 20.0% |
| !!! | CGAAACAATTTTTTTTTACT+GGG | + | chr8_2:2175318-2175337 | Msa1227080:intron | 20.0% |
| !!! | GAAACAATTTTTTTTTACTG+GGG | + | chr8_2:2175319-2175338 | Msa1227080:intron | 20.0% |
| !!! | AAACAATTTTTTTTTACTGG+GGG | + | chr8_2:2175320-2175339 | Msa1227080:intron | 20.0% |
| !!! | TTTAACCTCTAAATGTTTTA+TGG | - | chr8_2:2175563-2175582 | None:intergenic | 20.0% |
| !!! | TTAGCAATTTTAAATGTTCT+GGG | + | chr8_2:2175893-2175912 | Msa1227080:intron | 20.0% |
| !!! | ACTTTTATCATATAAGAAAC+AGG | - | chr8_2:2175955-2175974 | None:intergenic | 20.0% |
| !!! | AATACATCAAACTTTTGTTA+TGG | + | chr8_2:2175982-2176001 | Msa1227080:intron | 20.0% |
| !! | GTTATGGATAAGAAAAATAT+TGG | + | chr8_2:2175998-2176017 | Msa1227080:intron | 20.0% |
| !! | ATAAGAAAAATATTGGTGAA+TGG | + | chr8_2:2176005-2176024 | Msa1227080:intron | 20.0% |
| !! | AGCTTATTTAATTAGACTTT+AGG | + | chr8_2:2176037-2176056 | Msa1227080:intron | 20.0% |
| !!! | TTTTGTTTATGGAAAAAAGA+CGG | + | chr8_2:2176133-2176152 | Msa1227080:intron | 20.0% |
| !!! | TTTTTATGCTTACAAAACAT+TGG | + | chr8_2:2176606-2176625 | Msa1227080:intron | 20.0% |
| !! | TGCTAAAAATAGAATAAACA+CGG | + | chr8_2:2176943-2176962 | Msa1227080:intron | 20.0% |
| !! | GGATTATATAATTAACACTA+AGG | + | chr8_2:2176965-2176984 | Msa1227080:intron | 20.0% |
| !! | ATGTTAATCATCTTACTTAT+AGG | + | chr8_2:2177336-2177355 | Msa1227080:intron | 20.0% |
| !! | AGGAAGGAATTTATTTAATA+AGG | + | chr8_2:2177356-2177375 | Msa1227080:intron | 20.0% |
| !!! | TTTATTTTGGTTAGTAACAT+TGG | + | chr8_2:2177391-2177410 | Msa1227080:intron | 20.0% |
| !! | ACTCACGAATATAATATATT+TGG | - | chr8_2:2177741-2177760 | None:intergenic | 20.0% |
| !! | TAGTGATATTTAAATTCTTG+TGG | + | chr8_2:2177933-2177952 | Msa1227080:intron | 20.0% |
| !! | ATTAACAATTTCTCATTTGT+AGG | + | chr8_2:2178275-2178294 | Msa1227080:intron | 20.0% |
| !! | AATATTCTTATCATGCTTTA+TGG | + | chr8_2:2178488-2178507 | Msa1227080:intron | 20.0% |
| !!! | TTGTTATTCAATTAGTTAGT+TGG | + | chr8_2:2178771-2178790 | Msa1227080:intron | 20.0% |
| !! | AAATCTTCAATTCAATCAAA+AGG | + | chr8_2:2179396-2179415 | Msa1227080:three_prime_UTR | 20.0% |
| !! | GAAATTGAAAAGAAAGATTT+AGG | + | chr8_2:2179418-2179437 | Msa1227080:three_prime_UTR | 20.0% |
| !! | AAACAAAAACTATTTCAAAC+AGG | - | chr8_2:2179445-2179464 | None:intergenic | 20.0% |
| !! | GAATAGATTTTACATAAGCA+AGG | - | chr8_2:2173368-2173387 | None:intergenic | 25.0% |
| ! | AGTGAAATATTCTCTCTTTA+TGG | + | chr8_2:2173480-2173499 | Msa1227080:intron | 25.0% |
| ! | TGAAGAGGTTTAACAATAAA+GGG | - | chr8_2:2173617-2173636 | None:intergenic | 25.0% |
| ! | ATGAAGAGGTTTAACAATAA+AGG | - | chr8_2:2173618-2173637 | None:intergenic | 25.0% |
| ! | ATGAATTAAGAAGAATGAAG+AGG | - | chr8_2:2173632-2173651 | None:intergenic | 25.0% |
| ! | ACACGCTAAAAAAAACAAAA+GGG | - | chr8_2:2173689-2173708 | None:intergenic | 25.0% |
| !! | ATTTTTGCTAGACCTTTTAT+AGG | + | chr8_2:2173911-2173930 | Msa1227080:CDS | 25.0% |
| ! | ATATCTCTTTCAATTGACTA+GGG | - | chr8_2:2173982-2174001 | None:intergenic | 25.0% |
| ! | AATATCTCTTTCAATTGACT+AGG | - | chr8_2:2173983-2174002 | None:intergenic | 25.0% |
| ! | ATTAAATCGTTCATCCAAAA+AGG | - | chr8_2:2174051-2174070 | None:intergenic | 25.0% |
| ! | ATTGAAGCAACATGATTAAA+GGG | - | chr8_2:2174279-2174298 | None:intergenic | 25.0% |
| ! | AATTGAAGCAACATGATTAA+AGG | - | chr8_2:2174280-2174299 | None:intergenic | 25.0% |
| ! | TATTGTTGTACACTTGATAT+AGG | + | chr8_2:2174325-2174344 | Msa1227080:intron | 25.0% |
| ! | TGAACTCCTGAAATTAAAAT+CGG | - | chr8_2:2174789-2174808 | None:intergenic | 25.0% |
| ! | TAAAATAATCTTGTTCTTCC+TGG | - | chr8_2:2174826-2174845 | None:intergenic | 25.0% |
| !! | TCACTCAAGAAAAAGAATTT+TGG | - | chr8_2:2174912-2174931 | None:intergenic | 25.0% |
| ! | ATCAGTTAACTATTAGATAG+AGG | + | chr8_2:2174952-2174971 | Msa1227080:intron | 25.0% |
| !!! | AAACAGCCAAACTTTAATTT+TGG | + | chr8_2:2175001-2175020 | Msa1227080:intron | 25.0% |
| !!! | AAACAATTTTGTTTACAGGA+GGG | - | chr8_2:2175111-2175130 | None:intergenic | 25.0% |
| !!! | TAAACAATTTTGTTTACAGG+AGG | - | chr8_2:2175112-2175131 | None:intergenic | 25.0% |
| !!! | TTTTGAAATTTGACGTCATA+AGG | - | chr8_2:2175174-2175193 | None:intergenic | 25.0% |
| ! | ACGTCAAATTTCAAAATTGA+AGG | + | chr8_2:2175178-2175197 | Msa1227080:intron | 25.0% |
| ! | AAAATCGATGATATGATAGA+GGG | - | chr8_2:2175238-2175257 | None:intergenic | 25.0% |
| ! | CTAAAGAATCTTCAAATTAC+AGG | + | chr8_2:2175287-2175306 | Msa1227080:intron | 25.0% |
| !!! | CCGAAACAATTTTTTTTTAC+TGG | + | chr8_2:2175317-2175336 | Msa1227080:intron | 25.0% |
| ! | ATGCTACAAAGTTAAAGAAA+GGG | - | chr8_2:2175391-2175410 | None:intergenic | 25.0% |
| ! | AATGCTACAAAGTTAAAGAA+AGG | - | chr8_2:2175392-2175411 | None:intergenic | 25.0% |
| ! | TTTCATGCTTATTATGAAAG+TGG | + | chr8_2:2175477-2175496 | Msa1227080:intron | 25.0% |
| ! | GACAGTTGTTTAAACTATAA+TGG | + | chr8_2:2175499-2175518 | Msa1227080:intron | 25.0% |
| ! | AACAACCATAAAACATTTAG+AGG | + | chr8_2:2175555-2175574 | Msa1227080:intron | 25.0% |
| !! | CTTAGCAATTTTAAATGTTC+TGG | + | chr8_2:2175892-2175911 | Msa1227080:intron | 25.0% |
| ! | TAATTAAATAAGCTGATGCA+TGG | - | chr8_2:2176031-2176050 | None:intergenic | 25.0% |
| ! | AGTAAAAGAAAAACGAAAAG+AGG | - | chr8_2:2176265-2176284 | None:intergenic | 25.0% |
| ! | GCTAAAAATAGAATAAACAC+GGG | + | chr8_2:2176944-2176963 | Msa1227080:intron | 25.0% |
| ! | TAATCATCTTACTTATAGGA+AGG | + | chr8_2:2177340-2177359 | Msa1227080:intron | 25.0% |
| !!! | TTTTTTGTTTTTTCAGTGAC+AGG | + | chr8_2:2177463-2177482 | Msa1227080:intron | 25.0% |
| ! | GCATAAATCTGTATGATTTA+CGG | + | chr8_2:2177487-2177506 | Msa1227080:CDS | 25.0% |
| !! | TCATTATCATTTTCCTTACT+GGG | - | chr8_2:2177521-2177540 | None:intergenic | 25.0% |
| !! | ATCATTATCATTTTCCTTAC+TGG | - | chr8_2:2177522-2177541 | None:intergenic | 25.0% |
| !! | AGTAAGGAAAATGATAATGA+TGG | + | chr8_2:2177521-2177540 | Msa1227080:CDS | 25.0% |
| !!! | CTTTTGATTATACATATCCT+TGG | + | chr8_2:2177644-2177663 | Msa1227080:intron | 25.0% |
| !! | TTTTTCTGCTTCATATCTTT+TGG | + | chr8_2:2177707-2177726 | Msa1227080:intron | 25.0% |
| ! | CTTACCACTGTAAAATTTAT+GGG | - | chr8_2:2177833-2177852 | None:intergenic | 25.0% |
| ! | ACTTACCACTGTAAAATTTA+TGG | - | chr8_2:2177834-2177853 | None:intergenic | 25.0% |
| !! | TTCTTGTGGACAAATTTTAT+TGG | + | chr8_2:2177947-2177966 | Msa1227080:intron | 25.0% |
| ! | AGTAAGAAGATAAAATGACA+AGG | - | chr8_2:2178238-2178257 | None:intergenic | 25.0% |
| ! | ATCATACTAAAAGAATGCAA+AGG | + | chr8_2:2178340-2178359 | Msa1227080:CDS | 25.0% |
| !! | AATCTTTATCTTTTGTACAC+AGG | + | chr8_2:2178516-2178535 | Msa1227080:intron | 25.0% |
| !! | ATCTTTATCTTTTGTACACA+GGG | + | chr8_2:2178517-2178536 | Msa1227080:intron | 25.0% |
| ! | AAACTGTCATCTATTAATTG+TGG | + | chr8_2:2178706-2178725 | Msa1227080:intron | 25.0% |
| !! | AGTTTATATACTGTTTTCTC+AGG | + | chr8_2:2179190-2179209 | Msa1227080:three_prime_UTR | 25.0% |
| !! | GAAATCAATAGCTAATTTTG+TGG | + | chr8_2:2179242-2179261 | Msa1227080:three_prime_UTR | 25.0% |
| !! | CTGAACTAGGTTTTATAACT+GGG | - | chr8_2:2173119-2173138 | None:intergenic | 30.0% |
| !! | ACTGAACTAGGTTTTATAAC+TGG | - | chr8_2:2173120-2173139 | None:intergenic | 30.0% |
| ATATATGCACACCTTTACAA+CGG | - | chr8_2:2173273-2173292 | None:intergenic | 30.0% | |
| ATTGACACTTCTACTGAATT+TGG | + | chr8_2:2173446-2173465 | Msa1227080:intron | 30.0% | |
| GACACGCTAAAAAAAACAAA+AGG | - | chr8_2:2173690-2173709 | None:intergenic | 30.0% | |
| GAAGAATTGGATCGTAATTA+CGG | - | chr8_2:2173715-2173734 | None:intergenic | 30.0% | |
| CAATTGAAAGAGATATTCTC+TGG | + | chr8_2:2173986-2174005 | Msa1227080:intron | 30.0% | |
| ! | TACTTCAATTTTCCTTACTC+AGG | + | chr8_2:2174024-2174043 | Msa1227080:intron | 30.0% |
| !! | GTTTATAAGCACTTTTGAGA+CGG | - | chr8_2:2174240-2174259 | None:intergenic | 30.0% |
| TCAATTTCATGCTTAGCTAA+TGG | + | chr8_2:2174294-2174313 | Msa1227080:intron | 30.0% | |
| TTGTACACTTGATATAGGAT+TGG | + | chr8_2:2174330-2174349 | Msa1227080:intron | 30.0% | |
| AATGGTTATGGTTATGCTAA+TGG | + | chr8_2:2174440-2174459 | Msa1227080:intron | 30.0% | |
| ATGGTTATGGTTATGCTAAT+GGG | + | chr8_2:2174441-2174460 | Msa1227080:intron | 30.0% | |
| GAACTCCTGAAATTAAAATC+GGG | - | chr8_2:2174788-2174807 | None:intergenic | 30.0% | |
| !! | AACAATTTTGTTTACAGGAG+GGG | - | chr8_2:2175110-2175129 | None:intergenic | 30.0% |
| CAAAGAATCTTCAAACTACA+GGG | - | chr8_2:2175143-2175162 | None:intergenic | 30.0% | |
| !! | GTTTGAAGATTCTTTGGTTT+TGG | + | chr8_2:2175147-2175166 | Msa1227080:intron | 30.0% |
| CAAAATCGATGATATGATAG+AGG | - | chr8_2:2175239-2175258 | None:intergenic | 30.0% | |
| TGTACAGTCAAAATTCATGA+AGG | + | chr8_2:2175257-2175276 | Msa1227080:intron | 30.0% | |
| TGTAGCATTACACATGTAAT+TGG | + | chr8_2:2175403-2175422 | Msa1227080:intron | 30.0% | |
| CTTTGCATAATTCTCATAGA+TGG | + | chr8_2:2175526-2175545 | Msa1227080:intron | 30.0% | |
| ! | TATATTTGCTTTCTGAAGAG+TGG | + | chr8_2:2175917-2175936 | Msa1227080:intron | 30.0% |
| AATTAGACTTTAGGCAATGA+TGG | + | chr8_2:2176046-2176065 | Msa1227080:intron | 30.0% | |
| !! | TTTTCATGTTGGTTACAACT+TGG | + | chr8_2:2176078-2176097 | Msa1227080:intron | 30.0% |
| ! | TTTCATGTTGGTTACAACTT+GGG | + | chr8_2:2176079-2176098 | Msa1227080:intron | 30.0% |
| AAAGAAAAACGAAAAGAGGT+TGG | - | chr8_2:2176261-2176280 | None:intergenic | 30.0% | |
| CTCAATTAAGACAACTATTG+AGG | + | chr8_2:2176407-2176426 | Msa1227080:intron | 30.0% | |
| AATTAAGACAACTATTGAGG+TGG | + | chr8_2:2176410-2176429 | Msa1227080:intron | 30.0% | |
| ! | ATGTTTGGAAGAATGCATTT+TGG | + | chr8_2:2176525-2176544 | Msa1227080:intron | 30.0% |
| !! | AATGCATTTTGGTAAGTCAT+AGG | + | chr8_2:2176536-2176555 | Msa1227080:intron | 30.0% |
| !! | ATGCATTTTGGTAAGTCATA+GGG | + | chr8_2:2176537-2176556 | Msa1227080:intron | 30.0% |
| ! | ATAGGGCTGTTATTTATTTC+AGG | + | chr8_2:2176554-2176573 | Msa1227080:intron | 30.0% |
| TAGATATATGGAATCACAAC+AGG | + | chr8_2:2176704-2176723 | Msa1227080:CDS | 30.0% | |
| TAAGAGTCTACAAAAGTAGT+CGG | - | chr8_2:2176772-2176791 | None:intergenic | 30.0% | |
| ATATAACCTCCTTGTAGAAA+TGG | + | chr8_2:2177038-2177057 | Msa1227080:intron | 30.0% | |
| TTAGATGTACCATTTCTACA+AGG | - | chr8_2:2177050-2177069 | None:intergenic | 30.0% | |
| ACTAGGGAAAATAACTGAAA+GGG | - | chr8_2:2177171-2177190 | None:intergenic | 30.0% | |
| ATTAAGGTCAATGTTCTCAA+TGG | - | chr8_2:2177275-2177294 | None:intergenic | 30.0% | |
| AACCAAGACTAACTAGATTA+AGG | - | chr8_2:2177291-2177310 | None:intergenic | 30.0% | |
| AAATCTGTATGATTTACGGA+TGG | + | chr8_2:2177491-2177510 | Msa1227080:CDS | 30.0% | |
| ! | CATTATCATTTTCCTTACTG+GGG | - | chr8_2:2177520-2177539 | None:intergenic | 30.0% |
| GTAAAATTTATGGGTTCCAT+TGG | - | chr8_2:2177824-2177843 | None:intergenic | 30.0% | |
| TAGTTATGATTCCAGGAAAT+TGG | + | chr8_2:2178000-2178019 | Msa1227080:CDS | 30.0% | |
| AGTTATGATTCCAGGAAATT+GGG | + | chr8_2:2178001-2178020 | Msa1227080:CDS | 30.0% | |
| GTGATCTTTATGAACACATT+TGG | - | chr8_2:2178032-2178051 | None:intergenic | 30.0% | |
| ! | ATTTTCATGTTTCACTCTAC+AGG | + | chr8_2:2178126-2178145 | Msa1227080:intron | 30.0% |
| AACTGTTCTATCATAAGATC+CGG | - | chr8_2:2178192-2178211 | None:intergenic | 30.0% | |
| AAGGTTATAATGAAGTCCAA+GGG | - | chr8_2:2178219-2178238 | None:intergenic | 30.0% | |
| ! | AGAAATCTTTTAAACAGCTG+AGG | - | chr8_2:2178442-2178461 | None:intergenic | 30.0% |
| GATGGAAGTTATGTAATTTC+AGG | + | chr8_2:2178563-2178582 | Msa1227080:CDS | 30.0% | |
| TTCAATTAGTTAGTTGGCTA+TGG | + | chr8_2:2178777-2178796 | Msa1227080:intron | 30.0% | |
| CTCAGAAGAGAAATTATTAG+AGG | - | chr8_2:2178808-2178827 | None:intergenic | 30.0% | |
| CTAATAATTTCTCTTCTGAG+AGG | + | chr8_2:2178808-2178827 | Msa1227080:intron | 30.0% | |
| ! | AAAGAAGAAGCCTTGTATAT+TGG | - | chr8_2:2178990-2179009 | None:intergenic | 30.0% |
| TACACCAAAATTTCTTGCAT+TGG | - | chr8_2:2179297-2179316 | None:intergenic | 30.0% | |
| CAAAGTTATATCACGCTCTA+CGG | + | chr8_2:2173527-2173546 | Msa1227080:CDS | 35.0% | |
| AATGAATTACCTGAAGGTCT+TGG | - | chr8_2:2173575-2173594 | None:intergenic | 35.0% | |
| GCATTGAATGAATTACCTGA+AGG | - | chr8_2:2173581-2173600 | None:intergenic | 35.0% | |
| ! | TAGACCTTTTATAGGAGCAA+TGG | + | chr8_2:2173919-2173938 | Msa1227080:CDS | 35.0% |
| TGTAGATGCAATTTCGTGTA+TGG | + | chr8_2:2173949-2173968 | Msa1227080:CDS | 35.0% | |
| ! | AGAGATATTCTCTGGTTCAA+TGG | + | chr8_2:2173994-2174013 | Msa1227080:intron | 35.0% |
| ! | ATATTCTCTGGTTCAATGGA+TGG | + | chr8_2:2173998-2174017 | Msa1227080:intron | 35.0% |
| ! | CTTATTTCCACAAGCTTTTC+AGG | - | chr8_2:2174165-2174184 | None:intergenic | 35.0% |
| CTGAAAAGCTTGTGGAAATA+AGG | + | chr8_2:2174163-2174182 | Msa1227080:intron | 35.0% | |
| AGAAAGATTGGAAGAGTGAT+GGG | + | chr8_2:2174467-2174486 | Msa1227080:intron | 35.0% | |
| ATGCTGTTGAAAGTTTGGTT+TGG | + | chr8_2:2174493-2174512 | Msa1227080:intron | 35.0% | |
| AAAAACCACCAATGAAACAC+GGG | - | chr8_2:2174541-2174560 | None:intergenic | 35.0% | |
| GAAAAACCACCAATGAAACA+CGG | - | chr8_2:2174542-2174561 | None:intergenic | 35.0% | |
| ATTACAAATAGCCTAGCAGA+GGG | - | chr8_2:2174582-2174601 | None:intergenic | 35.0% | |
| GCTAGGCTATTTGTAATCTT+TGG | + | chr8_2:2174585-2174604 | Msa1227080:intron | 35.0% | |
| TGTCTACAAGTTTCTTGACT+GGG | - | chr8_2:2174659-2174678 | None:intergenic | 35.0% | |
| !!! | GGATACCCGATTTTAATTTC+AGG | + | chr8_2:2174780-2174799 | Msa1227080:intron | 35.0% |
| TTCAGTAGATAGTAAGATCC+AGG | + | chr8_2:2174805-2174824 | Msa1227080:intron | 35.0% | |
| CTAGAAATCGCTAATGTTAC+AGG | - | chr8_2:2175083-2175102 | None:intergenic | 35.0% | |
| CCAAAGAATCTTCAAACTAC+AGG | - | chr8_2:2175144-2175163 | None:intergenic | 35.0% | |
| CCTGTAGTTTGAAGATTCTT+TGG | + | chr8_2:2175141-2175160 | Msa1227080:intron | 35.0% | |
| AAAATCCGCTCAAATTACAG+GGG | - | chr8_2:2175214-2175233 | None:intergenic | 35.0% | |
| CAAAATCCGCTCAAATTACA+GGG | - | chr8_2:2175215-2175234 | None:intergenic | 35.0% | |
| ACTGTAATATTAGCGGTTTC+TGG | - | chr8_2:2175350-2175369 | None:intergenic | 35.0% | |
| AGAAACCGCTAATATTACAG+TGG | + | chr8_2:2175349-2175368 | Msa1227080:intron | 35.0% | |
| GAAACCGCTAATATTACAGT+GGG | + | chr8_2:2175350-2175369 | Msa1227080:intron | 35.0% | |
| AAACCGCTAATATTACAGTG+GGG | + | chr8_2:2175351-2175370 | Msa1227080:intron | 35.0% | |
| TTACCCCACTGTAATATTAG+CGG | - | chr8_2:2175357-2175376 | None:intergenic | 35.0% | |
| ! | TTTTCCAACCTCCTTATAAG+TGG | + | chr8_2:2175433-2175452 | Msa1227080:intron | 35.0% |
| TTTCCAACCTCCTTATAAGT+GGG | + | chr8_2:2175434-2175453 | Msa1227080:intron | 35.0% | |
| TAATGGCACTAGTATAGAGA+GGG | - | chr8_2:2175689-2175708 | None:intergenic | 35.0% | |
| ! | CAAGTAAGGAAAAGGTGTAA+TGG | - | chr8_2:2175706-2175725 | None:intergenic | 35.0% |
| TTGAGCATCAAGTAAGGAAA+AGG | - | chr8_2:2175714-2175733 | None:intergenic | 35.0% | |
| TGTTTGCAGATATTCGTCTT+TGG | + | chr8_2:2175772-2175791 | Msa1227080:intron | 35.0% | |
| GTTTGCAGATATTCGTCTTT+GGG | + | chr8_2:2175773-2175792 | Msa1227080:intron | 35.0% | |
| ! | TTCATGTTGGTTACAACTTG+GGG | + | chr8_2:2176080-2176099 | Msa1227080:intron | 35.0% |
| TTCCACATGAAACAAGAATG+CGG | - | chr8_2:2176221-2176240 | None:intergenic | 35.0% | |
| ! | AACTTTTCTGATGTGTGAAC+TGG | + | chr8_2:2176322-2176341 | Msa1227080:intron | 35.0% |
| TTATGTTCAGTGTCAGACTT+TGG | + | chr8_2:2176349-2176368 | Msa1227080:intron | 35.0% | |
| !! | AATGTTCCTGTTGCTTCTTT+TGG | + | chr8_2:2176372-2176391 | Msa1227080:intron | 35.0% |
| !! | ATGTTCCTGTTGCTTCTTTT+GGG | + | chr8_2:2176373-2176392 | Msa1227080:intron | 35.0% |
| !!! | TTTGAACTTTTTTCCCTAGC+CGG | + | chr8_2:2176493-2176512 | Msa1227080:intron | 35.0% |
| TTCCAAACATAAACACTTGC+CGG | - | chr8_2:2176515-2176534 | None:intergenic | 35.0% | |
| AGCCAGTAAATAGTTTCGTA+TGG | + | chr8_2:2176829-2176848 | Msa1227080:CDS | 35.0% | |
| GCCAGTAAATAGTTTCGTAT+GGG | + | chr8_2:2176830-2176849 | Msa1227080:CDS | 35.0% | |
| CCAGTAAATAGTTTCGTATG+GGG | + | chr8_2:2176831-2176850 | Msa1227080:CDS | 35.0% | |
| CTGCAATTACAATACAACAG+TGG | + | chr8_2:2176996-2177015 | Msa1227080:intron | 35.0% | |
| CTAGGGAAAATAACTGAAAG+GGG | - | chr8_2:2177170-2177189 | None:intergenic | 35.0% | |
| GACTAGGGAAAATAACTGAA+AGG | - | chr8_2:2177172-2177191 | None:intergenic | 35.0% | |
| ATTGATGGGAGTTGAGTTAA+CGG | - | chr8_2:2177249-2177268 | None:intergenic | 35.0% | |
| GTTCTCAATGGTGAATTGAT+GGG | - | chr8_2:2177263-2177282 | None:intergenic | 35.0% | |
| TGTTCTCAATGGTGAATTGA+TGG | - | chr8_2:2177264-2177283 | None:intergenic | 35.0% | |
| ! | GACCTTAATCTAGTTAGTCT+TGG | + | chr8_2:2177286-2177305 | Msa1227080:intron | 35.0% |
| !!! | CATGGCACATGTTTTGATTT+TGG | + | chr8_2:2177578-2177597 | Msa1227080:intron | 35.0% |
| !! | CCAAGCTATAGAATTGGTTT+TGG | - | chr8_2:2177798-2177817 | None:intergenic | 35.0% |
| CCAAAACCAATTCTATAGCT+TGG | + | chr8_2:2177795-2177814 | Msa1227080:CDS | 35.0% | |
| TGGATTCCAAGCTATAGAAT+TGG | - | chr8_2:2177804-2177823 | None:intergenic | 35.0% | |
| TTCTATAGCTTGGAATCCAA+TGG | + | chr8_2:2177805-2177824 | Msa1227080:CDS | 35.0% | |
| ! | GGAACCCATAAATTTTACAG+TGG | + | chr8_2:2177826-2177845 | Msa1227080:CDS | 35.0% |
| !! | AATAAAAGCATCAGAACCAC+TGG | - | chr8_2:2177874-2177893 | None:intergenic | 35.0% |
| ! | GACAAATTTTATTGGCATGC+AGG | + | chr8_2:2177955-2177974 | Msa1227080:intron | 35.0% |
| ACTGCTATAGTTATGATTCC+AGG | + | chr8_2:2177993-2178012 | Msa1227080:CDS | 35.0% | |
| ACGTTTCTGCAGTGTAATTA+TGG | + | chr8_2:2178050-2178069 | Msa1227080:intron | 35.0% | |
| CAAGGTTATAATGAAGTCCA+AGG | - | chr8_2:2178220-2178239 | None:intergenic | 35.0% | |
| GTGAGAATCTTCCCTTATAA+TGG | + | chr8_2:2178297-2178316 | Msa1227080:CDS | 35.0% | |
| AGAATCTTCCCTTATAATGG+TGG | + | chr8_2:2178300-2178319 | Msa1227080:CDS | 35.0% | |
| ATGATACTAACCTCAGACTT+TGG | + | chr8_2:2178591-2178610 | Msa1227080:CDS | 35.0% | |
| ATCTCAGGGAATGAATTGAA+GGG | - | chr8_2:2178834-2178853 | None:intergenic | 35.0% | |
| AATCTCAGGGAATGAATTGA+AGG | - | chr8_2:2178835-2178854 | None:intergenic | 35.0% | |
| CTTACCAAGACCAATATACA+AGG | + | chr8_2:2178977-2178996 | Msa1227080:CDS | 35.0% | |
| AGCTGATGCTAAGAAAAAGA+AGG | + | chr8_2:2179022-2179041 | Msa1227080:CDS | 35.0% | |
| CTAAGAAAAAGAAGGAAGAG+AGG | + | chr8_2:2179030-2179049 | Msa1227080:CDS | 35.0% | |
| ATAATTCTTCTTTCCCGCAA+CGG | - | chr8_2:2179095-2179114 | None:intergenic | 35.0% | |
| ATTATCAGAGAAGTTGAGTG+AGG | + | chr8_2:2179110-2179129 | Msa1227080:CDS | 35.0% | |
| !! | TTGCATTTTTCAGTATGCAC+TGG | - | chr8_2:2179146-2179165 | None:intergenic | 35.0% |
| ! | ATACTGTTTTCTCAGGCAAA+TGG | + | chr8_2:2179197-2179216 | Msa1227080:three_prime_UTR | 35.0% |
| ! | TTTTGTGGTGTTTTACTGCT+TGG | + | chr8_2:2179257-2179276 | Msa1227080:three_prime_UTR | 35.0% |
| ! | TGTGCCAATGCAAGAAATTT+TGG | + | chr8_2:2179290-2179309 | Msa1227080:three_prime_UTR | 35.0% |
| TGTTGAAGGTGAACTGAACT+AGG | - | chr8_2:2173132-2173151 | None:intergenic | 40.0% | |
| CCTTCAACATCGCATAACAT+CGG | + | chr8_2:2173143-2173162 | Msa1227080:five_prime_UTR | 40.0% | |
| TTCTCTTGAGGACGAAGAAT+TGG | - | chr8_2:2173728-2173747 | None:intergenic | 40.0% | |
| AATTCTTCGTCCTCAAGAGA+AGG | + | chr8_2:2173727-2173746 | Msa1227080:CDS | 40.0% | |
| CAATGCAGTGAAGTTGGATA+AGG | + | chr8_2:2173772-2173791 | Msa1227080:CDS | 40.0% | |
| CCATCCATTGCTCCTATAAA+AGG | - | chr8_2:2173926-2173945 | None:intergenic | 40.0% | |
| ! | CCTTTTATAGGAGCAATGGA+TGG | + | chr8_2:2173923-2173942 | Msa1227080:CDS | 40.0% |
| ! | TTCCTTACTCAGGTCCTTTT+TGG | + | chr8_2:2174034-2174053 | Msa1227080:intron | 40.0% |
| ATCCAAAAAGGACCTGAGTA+AGG | - | chr8_2:2174039-2174058 | None:intergenic | 40.0% | |
| AAGCTATCCTGAAAAGCTTG+TGG | + | chr8_2:2174155-2174174 | Msa1227080:intron | 40.0% | |
| !!! | AAGCACTTTTGAGACGGTTT+TGG | - | chr8_2:2174234-2174253 | None:intergenic | 40.0% |
| !! | GCTAATGGGTTGAGAAAGAT+TGG | + | chr8_2:2174455-2174474 | Msa1227080:intron | 40.0% |
| GAGAAAGATTGGAAGAGTGA+TGG | + | chr8_2:2174466-2174485 | Msa1227080:intron | 40.0% | |
| ! | GGTTGATGCTGTTGAAAGTT+TGG | + | chr8_2:2174488-2174507 | Msa1227080:intron | 40.0% |
| !! | GGTTTTTCAACACGTCTACT+TGG | + | chr8_2:2174554-2174573 | Msa1227080:intron | 40.0% |
| TTACAAATAGCCTAGCAGAG+GGG | - | chr8_2:2174581-2174600 | None:intergenic | 40.0% | |
| GATTACAAATAGCCTAGCAG+AGG | - | chr8_2:2174583-2174602 | None:intergenic | 40.0% | |
| CTTGACTGGGAGTAAAATTG+TGG | - | chr8_2:2174646-2174665 | None:intergenic | 40.0% | |
| CTGTCTACAAGTTTCTTGAC+TGG | - | chr8_2:2174660-2174679 | None:intergenic | 40.0% | |
| GAAATCGCTAATGTTACAGG+AGG | - | chr8_2:2175080-2175099 | None:intergenic | 40.0% | |
| GAATCTTCAAACTACAGGGT+TGG | - | chr8_2:2175139-2175158 | None:intergenic | 40.0% | |
| GCAAAATCCGCTCAAATTAC+AGG | - | chr8_2:2175216-2175235 | None:intergenic | 40.0% | |
| TTCCAACCTCCTTATAAGTG+GGG | + | chr8_2:2175435-2175454 | Msa1227080:intron | 40.0% | |
| TGATTCTTGCCCCACTTATA+AGG | - | chr8_2:2175447-2175466 | None:intergenic | 40.0% | |
| !! | ATTCTGGTGCTTGTTTTCAC+TGG | + | chr8_2:2175647-2175666 | Msa1227080:intron | 40.0% |
| AATGGCACTAGTATAGAGAG+GGG | - | chr8_2:2175688-2175707 | None:intergenic | 40.0% | |
| GTAATGGCACTAGTATAGAG+AGG | - | chr8_2:2175690-2175709 | None:intergenic | 40.0% | |
| !! | AACGGATTGAGCATCAAGTA+AGG | - | chr8_2:2175720-2175739 | None:intergenic | 40.0% |
| TCTGCAAACACAATAAACGC+AGG | - | chr8_2:2175762-2175781 | None:intergenic | 40.0% | |
| AGACTTTAGGCAATGATGGT+AGG | + | chr8_2:2176050-2176069 | Msa1227080:intron | 40.0% | |
| TTTAGGCAATGATGGTAGGA+AGG | + | chr8_2:2176054-2176073 | Msa1227080:intron | 40.0% | |
| ! | GGTAGGAAGGATTTTCATGT+TGG | + | chr8_2:2176067-2176086 | Msa1227080:intron | 40.0% |
| ! | TCATGTTGGTTACAACTTGG+GGG | + | chr8_2:2176081-2176100 | Msa1227080:intron | 40.0% |
| !! | AAAAGAGGTTGGTACTTACG+TGG | - | chr8_2:2176250-2176269 | None:intergenic | 40.0% |
| !! | TGTTCCTGTTGCTTCTTTTG+GGG | + | chr8_2:2176374-2176393 | Msa1227080:intron | 40.0% |
| ! | ATTGAGGTGGAATTTTGTGC+TGG | + | chr8_2:2176423-2176442 | Msa1227080:intron | 40.0% |
| CCCCATACGAAACTATTTAC+TGG | - | chr8_2:2176834-2176853 | None:intergenic | 40.0% | |
| TTTCGTATGGGGATCAGATA+CGG | + | chr8_2:2176842-2176861 | Msa1227080:CDS | 40.0% | |
| ATTTCTGTCCGCTTTAATCC+AGG | + | chr8_2:2176867-2176886 | Msa1227080:CDS | 40.0% | |
| ! | TTGGTTCTCCTGGATTAAAG+CGG | - | chr8_2:2176878-2176897 | None:intergenic | 40.0% |
| CAGTGGCTGATTACAATGAA+TGG | + | chr8_2:2177013-2177032 | Msa1227080:intron | 40.0% | |
| GATGTACCATTTCTACAAGG+AGG | - | chr8_2:2177047-2177066 | None:intergenic | 40.0% | |
| TATCTGATCAGTTTGTCCAG+TGG | + | chr8_2:2177855-2177874 | Msa1227080:intron | 40.0% | |
| TCATGTTTCACTCTACAGGA+TGG | + | chr8_2:2178130-2178149 | Msa1227080:intron | 40.0% | |
| ! | GATATTGACTACTCACCAAC+TGG | + | chr8_2:2178152-2178171 | Msa1227080:CDS | 40.0% |
| GATAGAACAGTTAGTTCCCT+TGG | + | chr8_2:2178200-2178219 | Msa1227080:intron | 40.0% | |
| TGCTGTGACCACCATTATAA+GGG | - | chr8_2:2178311-2178330 | None:intergenic | 40.0% | |
| GTATTCTGTGTCAAGTTCAG+CGG | + | chr8_2:2178539-2178558 | Msa1227080:CDS | 40.0% | |
| TACTAACCTCAGACTTTGGA+AGG | + | chr8_2:2178595-2178614 | Msa1227080:CDS | 40.0% | |
| TCCAAGTTGTTCTGATGCTT+TGG | - | chr8_2:2178621-2178640 | None:intergenic | 40.0% | |
| TCGTAAACAGGTGAATCTCA+GGG | - | chr8_2:2178848-2178867 | None:intergenic | 40.0% | |
| ATCGTAAACAGGTGAATCTC+AGG | - | chr8_2:2178849-2178868 | None:intergenic | 40.0% | |
| ! | TCATGCTTCTTCTTTTCCCT+CGG | - | chr8_2:2178888-2178907 | None:intergenic | 40.0% |
| CAATACGGTTAACTTCAGGA+AGG | - | chr8_2:2178944-2178963 | None:intergenic | 40.0% | |
| CTTGCAATACGGTTAACTTC+AGG | - | chr8_2:2178948-2178967 | None:intergenic | 40.0% | |
| CTGAAGTTAACCGTATTGCA+AGG | + | chr8_2:2178946-2178965 | Msa1227080:CDS | 40.0% | |
| AGTGTCTATGCCTTGCAATA+CGG | - | chr8_2:2178959-2178978 | None:intergenic | 40.0% | |
| ! | GAAGCCTTGTATATTGGTCT+TGG | - | chr8_2:2178984-2179003 | None:intergenic | 40.0% |
| AGAAAAAGAAGGAAGAGAGG+AGG | + | chr8_2:2179033-2179052 | Msa1227080:CDS | 40.0% | |
| ! | ATAACTGGGCTTGCTCTCTA+TGG | - | chr8_2:2173105-2173124 | None:intergenic | 45.0% |
| CCGATGTTATGCGATGTTGA+AGG | - | chr8_2:2173146-2173165 | None:intergenic | 45.0% | |
| AGTTATATCACGCTCTACGG+AGG | + | chr8_2:2173530-2173549 | Msa1227080:CDS | 45.0% | |
| TGCTCTCAATGCAGTGAAGT+TGG | + | chr8_2:2173766-2173785 | Msa1227080:CDS | 45.0% | |
| ! | TTCTCTGGTTCAATGGATGG+AGG | + | chr8_2:2174001-2174020 | Msa1227080:intron | 45.0% |
| AATGAAACACGGGTCTGGTT+CGG | - | chr8_2:2174531-2174550 | None:intergenic | 45.0% | |
| ! | GTGGTTGATGTATCGTCTCT+AGG | - | chr8_2:2174627-2174646 | None:intergenic | 45.0% |
| TCACACCCCTGTAATTTGAG+CGG | + | chr8_2:2175206-2175225 | Msa1227080:intron | 45.0% | |
| TTCTTGCCCCACTTATAAGG+AGG | - | chr8_2:2175444-2175463 | None:intergenic | 45.0% | |
| GGGACAAAAAGGAGGAGTAA+TGG | - | chr8_2:2175610-2175629 | None:intergenic | 45.0% | |
| AGAATGACACAGCCAGATGT+GGG | - | chr8_2:2175632-2175651 | None:intergenic | 45.0% | |
| !! | GTCTTTGGGATATAGCTGCT+AGG | + | chr8_2:2175787-2175806 | Msa1227080:CDS | 45.0% |
| ! | ACATAAACACTTGCCGGCTA+GGG | - | chr8_2:2176509-2176528 | None:intergenic | 45.0% |
| ! | AACATAAACACTTGCCGGCT+AGG | - | chr8_2:2176510-2176529 | None:intergenic | 45.0% |
| AGCCGGCAAGTGTTTATGTT+TGG | + | chr8_2:2176510-2176529 | Msa1227080:intron | 45.0% | |
| TTAGCGCTGTTGATCACCAA+TGG | + | chr8_2:2176647-2176666 | Msa1227080:intron | 45.0% | |
| TAGCGCTGTTGATCACCAAT+GGG | + | chr8_2:2176648-2176667 | Msa1227080:intron | 45.0% | |
| GTGGCGCTCAAGTAGATATA+TGG | + | chr8_2:2176692-2176711 | Msa1227080:CDS | 45.0% | |
| TGTTGTTACCTCCTTTCTGC+AGG | + | chr8_2:2176802-2176821 | Msa1227080:intron | 45.0% | |
| !! | GCTAAGAGATTTGGTTCTCC+TGG | - | chr8_2:2176888-2176907 | None:intergenic | 45.0% |
| !! | GCTGAGCTTGCTAAGAGATT+TGG | - | chr8_2:2176897-2176916 | None:intergenic | 45.0% |
| ATCTCTTAGCAAGCTCAGCT+AGG | + | chr8_2:2176898-2176917 | Msa1227080:CDS | 45.0% | |
| ACACGGGTAAGGATTTGGAA+GGG | - | chr8_2:2177132-2177151 | None:intergenic | 45.0% | |
| ! | TACTATCTGAGACACGGGTA+AGG | - | chr8_2:2177143-2177162 | None:intergenic | 45.0% |
| !! | GAGAGTACTATCTGAGACAC+GGG | - | chr8_2:2177148-2177167 | None:intergenic | 45.0% |
| !! | GGAGAGTACTATCTGAGACA+CGG | - | chr8_2:2177149-2177168 | None:intergenic | 45.0% |
| GGGAATCATGAGAGAGACTA+GGG | - | chr8_2:2177187-2177206 | None:intergenic | 45.0% | |
| TGGGAATCATGAGAGAGACT+AGG | - | chr8_2:2177188-2177207 | None:intergenic | 45.0% | |
| GAGTTAACGGAATTGCCAGA+TGG | - | chr8_2:2177236-2177255 | None:intergenic | 45.0% | |
| TGCAGTTACGAAATGTGCCA+AGG | - | chr8_2:2177664-2177683 | None:intergenic | 45.0% | |
| ! | TTTGGCTTCACCCAATTTCC+TGG | - | chr8_2:2178014-2178033 | None:intergenic | 45.0% |
| GTGACAAATTCTCGACCAGT+TGG | - | chr8_2:2178170-2178189 | None:intergenic | 45.0% | |
| ACTGGTCGAGAATTTGTCAC+CGG | + | chr8_2:2178170-2178189 | Msa1227080:CDS | 45.0% | |
| CTGCTGTGACCACCATTATA+AGG | - | chr8_2:2178312-2178331 | None:intergenic | 45.0% | |
| ! | GCCAAAGCATCAGAACAACT+TGG | + | chr8_2:2178617-2178636 | Msa1227080:CDS | 45.0% |
| TGTGTGTGTGTGGAGAAAGA+CGG | - | chr8_2:2178665-2178684 | None:intergenic | 45.0% | |
| ! | GAAGAAGCATGACTATCACG+AGG | + | chr8_2:2178896-2178915 | Msa1227080:CDS | 45.0% |
| AGGCCATAAAGAAACGCTAC+AGG | + | chr8_2:2178916-2178935 | Msa1227080:CDS | 45.0% | |
| GTGCCTGTAGCGTTTCTTTA+TGG | - | chr8_2:2178922-2178941 | None:intergenic | 45.0% | |
| ! | CTTTGTTGTAACACTCCCTG+GGG | - | chr8_2:2179072-2179091 | None:intergenic | 45.0% |
| ! | GCTTTGTTGTAACACTCCCT+GGG | - | chr8_2:2179073-2179092 | None:intergenic | 45.0% |
| GTGTTACAACAAAGCCGTTG+CGG | + | chr8_2:2179078-2179097 | Msa1227080:CDS | 45.0% | |
| TGTTACAACAAAGCCGTTGC+GGG | + | chr8_2:2179079-2179098 | Msa1227080:CDS | 45.0% | |
| !! | ACATCGCATAACATCGGCTC+CGG | + | chr8_2:2173149-2173168 | Msa1227080:five_prime_UTR | 50.0% |
| TTAGGGTTCGGAATTGGCAG+AGG | - | chr8_2:2173185-2173204 | None:intergenic | 50.0% | |
| ACGGAGGAAGTAGCAATGAG+CGG | - | chr8_2:2173247-2173266 | None:intergenic | 50.0% | |
| CACACCTTTACAACGGCGAA+CGG | - | chr8_2:2173266-2173285 | None:intergenic | 50.0% | |
| AGAACGAAGCCAAGACCTTC+AGG | + | chr8_2:2173563-2173582 | Msa1227080:CDS | 50.0% | |
| TCTTCGTCCTCAAGAGAAGG+CGG | + | chr8_2:2173730-2173749 | Msa1227080:CDS | 50.0% | |
| TATTCCACCGCCTTCTCTTG+AGG | - | chr8_2:2173740-2173759 | None:intergenic | 50.0% | |
| GAACCAGACCCGTGTTTCAT+TGG | + | chr8_2:2174530-2174549 | Msa1227080:intron | 50.0% | |
| TGCCCCACTTATAAGGAGGT+TGG | - | chr8_2:2175440-2175459 | None:intergenic | 50.0% | |
| AGATGTGGGGGACAAAAAGG+AGG | - | chr8_2:2175618-2175637 | None:intergenic | 50.0% | |
| ! | TCCTTTTTGTCCCCCACATC+TGG | + | chr8_2:2175617-2175636 | Msa1227080:intron | 50.0% |
| AATGACACAGCCAGATGTGG+GGG | - | chr8_2:2175630-2175649 | None:intergenic | 50.0% | |
| GAATGACACAGCCAGATGTG+GGG | - | chr8_2:2175631-2175650 | None:intergenic | 50.0% | |
| CAGAATGACACAGCCAGATG+TGG | - | chr8_2:2175633-2175652 | None:intergenic | 50.0% | |
| ! | CACATCTGGCTGTGTCATTC+TGG | + | chr8_2:2175631-2175650 | Msa1227080:intron | 50.0% |
| ! | GGCCGCATTCTTGTTTCATG+TGG | + | chr8_2:2176216-2176235 | Msa1227080:CDS | 50.0% |
| GAGTCCCCAAAAGAAGCAAC+AGG | - | chr8_2:2176381-2176400 | None:intergenic | 50.0% | |
| !! | GCTTCTTTTGGGGACTCAGA+TGG | + | chr8_2:2176384-2176403 | Msa1227080:intron | 50.0% |
| ! | GAGGTGGAATTTTGTGCTGG+AGG | + | chr8_2:2176426-2176445 | Msa1227080:intron | 50.0% |
| GCTGTTGATCACCAATGGGA+CGG | + | chr8_2:2176652-2176671 | Msa1227080:CDS | 50.0% | |
| GACACGGGTAAGGATTTGGA+AGG | - | chr8_2:2177133-2177152 | None:intergenic | 50.0% | |
| CTGAGACACGGGTAAGGATT+TGG | - | chr8_2:2177137-2177156 | None:intergenic | 50.0% | |
| AGGAGGAATGAAGAGGACGT+GGG | - | chr8_2:2177207-2177226 | None:intergenic | 50.0% | |
| GCAAGTGAGGAGGAATGAAG+AGG | - | chr8_2:2177214-2177233 | None:intergenic | 50.0% | |
| ATTCCTCCTCACTTGCCATC+TGG | + | chr8_2:2177218-2177237 | Msa1227080:intron | 50.0% | |
| GAATTGCCAGATGGCAAGTG+AGG | - | chr8_2:2177227-2177246 | None:intergenic | 50.0% | |
| TACGGATGGATACCCCAGTA+AGG | + | chr8_2:2177505-2177524 | Msa1227080:CDS | 50.0% | |
| GGCATGCAGGCAAATGAAGA+TGG | + | chr8_2:2177968-2177987 | Msa1227080:intron | 50.0% | |
| ! | CTTTGGCCTTCCAAAGTCTG+AGG | - | chr8_2:2178604-2178623 | None:intergenic | 50.0% |
| TGTGTGTGTGTGTGTGTGTG+TGG | - | chr8_2:2178673-2178692 | None:intergenic | 50.0% | |
| CCTGTGGCATCATCGTAAAC+AGG | - | chr8_2:2178860-2178879 | None:intergenic | 50.0% | |
| CCTGTTTACGATGATGCCAC+AGG | + | chr8_2:2178857-2178876 | Msa1227080:intron | 50.0% | |
| ! | TTTTCCCTCGGAAGAACCTG+TGG | - | chr8_2:2178876-2178895 | None:intergenic | 50.0% |
| !! | GGCTTTGTTGTAACACTCCC+TGG | - | chr8_2:2179074-2179093 | None:intergenic | 50.0% |
| GGTTCGGAATTGGCAGAGGA+TGG | - | chr8_2:2173181-2173200 | None:intergenic | 55.0% | |
| CAGGGGTTAGGGTTCGGAAT+TGG | - | chr8_2:2173191-2173210 | None:intergenic | 55.0% | |
| TGCACACAGGGGTTAGGGTT+CGG | - | chr8_2:2173197-2173216 | None:intergenic | 55.0% | |
| GAGGAAGTAGCAATGAGCGG+CGG | - | chr8_2:2173244-2173263 | None:intergenic | 55.0% | |
| TCCTCCGTTCGCCGTTGTAA+AGG | + | chr8_2:2173259-2173278 | Msa1227080:five_prime_UTR | 55.0% | |
| ACCTTTACAACGGCGAACGG+AGG | - | chr8_2:2173263-2173282 | None:intergenic | 55.0% | |
| !! | GGGTCTGGTTCGGTATGGTA+TGG | - | chr8_2:2174521-2174540 | None:intergenic | 55.0% |
| !! | AACACGGGTCTGGTTCGGTA+TGG | - | chr8_2:2174526-2174545 | None:intergenic | 55.0% |
| CCACCAATGAAACACGGGTC+TGG | - | chr8_2:2174536-2174555 | None:intergenic | 55.0% | |
| CCAGACCCGTGTTTCATTGG+TGG | + | chr8_2:2174533-2174552 | Msa1227080:intron | 55.0% | |
| TCTACTTGGACCCCTCTGCT+AGG | + | chr8_2:2174568-2174587 | Msa1227080:intron | 55.0% | |
| GCCAGATGTGGGGGACAAAA+AGG | - | chr8_2:2175621-2175640 | None:intergenic | 55.0% | |
| ACTAGTATAGAGAGGGGCGG+GGG | - | chr8_2:2175682-2175701 | None:intergenic | 55.0% | |
| CACTAGTATAGAGAGGGGCG+GGG | - | chr8_2:2175683-2175702 | None:intergenic | 55.0% | |
| GCACTAGTATAGAGAGGGGC+GGG | - | chr8_2:2175684-2175703 | None:intergenic | 55.0% | |
| GGCACTAGTATAGAGAGGGG+CGG | - | chr8_2:2175685-2175704 | None:intergenic | 55.0% | |
| CGGACTGTTTGTCAGTTCCC+TGG | + | chr8_2:2176153-2176172 | Msa1227080:CDS | 55.0% | |
| TGTCAGTTCCCTGGACACCA+AGG | + | chr8_2:2176162-2176181 | Msa1227080:CDS | 55.0% | |
| CAAAATGCTCGCCGTCCCAT+TGG | - | chr8_2:2176666-2176685 | None:intergenic | 55.0% | |
| ATCTACTTGAGCGCCACCTG+TGG | - | chr8_2:2176689-2176708 | None:intergenic | 55.0% | |
| ACTGGCTGAGACCTGCAGAA+AGG | - | chr8_2:2176816-2176835 | None:intergenic | 55.0% | |
| GAGGAGGAATGAAGAGGACG+TGG | - | chr8_2:2177208-2177227 | None:intergenic | 55.0% | |
| TTGCCAGATGGCAAGTGAGG+AGG | - | chr8_2:2177224-2177243 | None:intergenic | 55.0% | |
| TGTGTCAAGTTCAGCGGCGA+TGG | + | chr8_2:2178545-2178564 | Msa1227080:CDS | 55.0% | |
| TGATGCCACAGGTTCTTCCG+AGG | + | chr8_2:2178868-2178887 | Msa1227080:intron | 55.0% | |
| GATGCCACAGGTTCTTCCGA+GGG | + | chr8_2:2178869-2178888 | Msa1227080:intron | 55.0% | |
| ! | TGGCAGAGGATGGTGCTAGC+CGG | - | chr8_2:2173171-2173190 | None:intergenic | 60.0% |
| GGTGGTGCACACAGGGGTTA+GGG | - | chr8_2:2173202-2173221 | None:intergenic | 60.0% | |
| ATTGGCGGTGGTGCACACAG+GGG | - | chr8_2:2173208-2173227 | None:intergenic | 60.0% | |
| GATTGGCGGTGGTGCACACA+GGG | - | chr8_2:2173209-2173228 | None:intergenic | 60.0% | |
| !! | GGTGAGCTGTGGTGGATTGG+CGG | - | chr8_2:2173223-2173242 | None:intergenic | 60.0% |
| TCGTCCTCAAGAGAAGGCGG+TGG | + | chr8_2:2173733-2173752 | Msa1227080:CDS | 60.0% | |
| CTAGTATAGAGAGGGGCGGG+GGG | - | chr8_2:2175681-2175700 | None:intergenic | 60.0% | |
| !! | GCACAGCACCTTGGTGTCCA+GGG | - | chr8_2:2176173-2176192 | None:intergenic | 60.0% |
| !! | GGCCTGACAGCATCGACAGA+TGG | + | chr8_2:2176195-2176214 | Msa1227080:CDS | 60.0% |
| GGCCATCTGTCGATGCTGTC+AGG | - | chr8_2:2176200-2176219 | None:intergenic | 60.0% | |
| ! | GACGGCGAGCATTTTGCCAC+AGG | + | chr8_2:2176670-2176689 | Msa1227080:CDS | 60.0% |
| ! | GGCGAGCATTTTGCCACAGG+TGG | + | chr8_2:2176673-2176692 | Msa1227080:CDS | 60.0% |
| GGCTGAGACCTGCAGAAAGG+AGG | - | chr8_2:2176813-2176832 | None:intergenic | 60.0% | |
| AGGAAAGCTCACAGTGCCCC+AGG | + | chr8_2:2179053-2179072 | Msa1227080:CDS | 60.0% | |
| GGAAAGCTCACAGTGCCCCA+GGG | + | chr8_2:2179054-2179073 | Msa1227080:CDS | 60.0% | |
| CGGTGGTGCACACAGGGGTT+AGG | - | chr8_2:2173203-2173222 | None:intergenic | 65.0% | |
| ! | GGATTGGCGGTGGTGCACAC+AGG | - | chr8_2:2173210-2173229 | None:intergenic | 65.0% |
| !! | GAGCTGTGGTGGATTGGCGG+TGG | - | chr8_2:2173220-2173239 | None:intergenic | 65.0% |
| !! | GGCGGTGAGCTGTGGTGGAT+TGG | - | chr8_2:2173226-2173245 | None:intergenic | 65.0% |
| CAATGAGCGGCGGTGAGCTG+TGG | - | chr8_2:2173234-2173253 | None:intergenic | 65.0% | |
| !! | CGCACAGCACCTTGGTGTCC+AGG | - | chr8_2:2176174-2176193 | None:intergenic | 65.0% |
| !! | GGACACCAAGGTGCTGTGCG+AGG | + | chr8_2:2176174-2176193 | Msa1227080:CDS | 65.0% |
| TCAGGCCTCGCACAGCACCT+TGG | - | chr8_2:2176182-2176201 | None:intergenic | 65.0% | |
| TGAGCGGCGGTGAGCTGTGG+TGG | - | chr8_2:2173231-2173250 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 2173099 | 2179485 | 2173099 | ID=Msa1227080;Name=Msa1227080 |
| chr8_2 | mRNA | 2173099 | 2179485 | 2173099 | ID=Msa1227080-mRNA-1;Parent=Msa1227080;Name=Msa1227080-mRNA-1;_AED=0.16;_eAED=0.16;_QI=185|0.85|0.93|1|0.85|0.86|15|355|404 |
| chr8_2 | exon | 2173099 | 2173280 | 2173099 | ID=Msa1227080-mRNA-1:exon:485;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2173516 | 2173584 | 2173516 | ID=Msa1227080-mRNA-1:exon:486;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2173704 | 2173793 | 2173704 | ID=Msa1227080-mRNA-1:exon:487;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2173911 | 2173983 | 2173911 | ID=Msa1227080-mRNA-1:exon:488;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2175781 | 2175808 | 2175781 | ID=Msa1227080-mRNA-1:exon:489;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2176152 | 2176250 | 2176152 | ID=Msa1227080-mRNA-1:exon:490;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2176651 | 2176725 | 2176651 | ID=Msa1227080-mRNA-1:exon:491;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2176824 | 2176919 | 2176824 | ID=Msa1227080-mRNA-1:exon:492;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2177479 | 2177542 | 2177479 | ID=Msa1227080-mRNA-1:exon:493;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2177794 | 2177847 | 2177794 | ID=Msa1227080-mRNA-1:exon:494;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2177977 | 2178062 | 2177977 | ID=Msa1227080-mRNA-1:exon:495;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2178148 | 2178208 | 2178148 | ID=Msa1227080-mRNA-1:exon:496;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2178297 | 2178361 | 2178297 | ID=Msa1227080-mRNA-1:exon:497;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2178538 | 2178643 | 2178538 | ID=Msa1227080-mRNA-1:exon:498;Parent=Msa1227080-mRNA-1 |
| chr8_2 | exon | 2178879 | 2179485 | 2178879 | ID=Msa1227080-mRNA-1:exon:499;Parent=Msa1227080-mRNA-1 |
| chr8_2 | five_prime_UTR | 2173099 | 2173280 | 2173099 | ID=Msa1227080-mRNA-1:five_prime_utr;Parent=Msa1227080-mRNA-1 |
| chr8_2 | five_prime_UTR | 2173516 | 2173518 | 2173516 | ID=Msa1227080-mRNA-1:five_prime_utr;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2173519 | 2173584 | 2173519 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2173704 | 2173793 | 2173704 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2173911 | 2173983 | 2173911 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2175781 | 2175808 | 2175781 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2176152 | 2176250 | 2176152 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2176651 | 2176725 | 2176651 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2176824 | 2176919 | 2176824 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2177479 | 2177542 | 2177479 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2177794 | 2177847 | 2177794 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2177977 | 2178062 | 2177977 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2178148 | 2178208 | 2178148 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2178297 | 2178361 | 2178297 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2178538 | 2178643 | 2178538 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | CDS | 2178879 | 2179130 | 2178879 | ID=Msa1227080-mRNA-1:cds;Parent=Msa1227080-mRNA-1 |
| chr8_2 | three_prime_UTR | 2179131 | 2179485 | 2179131 | ID=Msa1227080-mRNA-1:three_prime_utr;Parent=Msa1227080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
