Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472480 | XP_003602417.1 | 99.482 | 193 | 1 | 0 | 1 | 193 | 1 | 193 | 6.32e-135 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472480 | sp|P30707|RL9_PEA | 96.891 | 193 | 6 | 0 | 1 | 193 | 1 | 193 | 1.55e-134 | 377 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472480 | G7J9M6 | 99.482 | 193 | 1 | 0 | 1 | 193 | 1 | 193 | 3.02e-135 | 385 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0472480 | 0.866768 | 2.238765e-65 | -8.615850e-47 |
| Msa0003330 | Msa0472480 | 0.842774 | 2.105145e-58 | -8.615850e-47 |
| Msa0003360 | Msa0472480 | 0.835589 | 1.536543e-56 | -8.615850e-47 |
| Msa0021290 | Msa0472480 | 0.842523 | 2.455700e-58 | -8.615850e-47 |
| Msa0021320 | Msa0472480 | 0.834195 | 3.448900e-56 | -8.615850e-47 |
| Msa0027590 | Msa0472480 | 0.898604 | 4.510336e-77 | -8.615850e-47 |
| Msa0040220 | Msa0472480 | 0.905664 | 3.379282e-80 | -8.615850e-47 |
| Msa0042480 | Msa0472480 | 0.837975 | 3.785132e-57 | -8.615850e-47 |
| Msa0042510 | Msa0472480 | 0.821512 | 3.881188e-53 | -8.615850e-47 |
| Msa0050860 | Msa0472480 | 0.846025 | 2.813933e-59 | -8.615850e-47 |
| Msa0070840 | Msa0472480 | 0.849839 | 2.499381e-60 | -8.615850e-47 |
| Msa0072570 | Msa0472480 | 0.866654 | 2.434872e-65 | -8.615850e-47 |
| Msa0075350 | Msa0472480 | 0.856021 | 4.261690e-62 | -8.615850e-47 |
| Msa0079560 | Msa0472480 | 0.806453 | 8.166318e-50 | -8.615850e-47 |
| Msa0079590 | Msa0472480 | 0.860811 | 1.591883e-63 | -8.615850e-47 |
| Msa0087910 | Msa0472480 | 0.874489 | 6.490601e-68 | -8.615850e-47 |
| Msa0094210 | Msa0472480 | 0.842462 | 2.548075e-58 | -8.615850e-47 |
| Msa0110630 | Msa0472480 | 0.812694 | 3.727647e-51 | -8.615850e-47 |
| Msa0113920 | Msa0472480 | 0.811253 | 7.680125e-51 | -8.615850e-47 |
| Msa0114570 | Msa0472480 | 0.839320 | 1.700610e-57 | -8.615850e-47 |
| Msa0114600 | Msa0472480 | 0.808039 | 3.767607e-50 | -8.615850e-47 |
| Msa0116600 | Msa0472480 | 0.832942 | 7.087873e-56 | -8.615850e-47 |
| Msa0116690 | Msa0472480 | 0.826896 | 2.109095e-54 | -8.615850e-47 |
| Msa0128330 | Msa0472480 | 0.877583 | 5.592450e-69 | -8.615850e-47 |
| Msa0132460 | Msa0472480 | 0.883809 | 3.276720e-71 | -8.615850e-47 |
| Msa0134580 | Msa0472480 | 0.896023 | 5.488835e-76 | -8.615850e-47 |
| Msa0146580 | Msa0472480 | 0.841155 | 5.641108e-58 | -8.615850e-47 |
| Msa0167860 | Msa0472480 | 0.884428 | 1.933274e-71 | -8.615850e-47 |
| Msa0168320 | Msa0472480 | 0.865694 | 4.903648e-65 | -8.615850e-47 |
| Msa0172930 | Msa0472480 | 0.812964 | 3.251861e-51 | -8.615850e-47 |
| Msa0174580 | Msa0472480 | 0.865440 | 5.898274e-65 | -8.615850e-47 |
| Msa0175000 | Msa0472480 | 0.809236 | 2.090314e-50 | -8.615850e-47 |
| Msa0182050 | Msa0472480 | 0.887339 | 1.556395e-72 | -8.615850e-47 |
| Msa0182100 | Msa0472480 | 0.855678 | 5.371236e-62 | -8.615850e-47 |
| Msa0186740 | Msa0472480 | 0.811694 | 6.160403e-51 | -8.615850e-47 |
| Msa0187810 | Msa0472480 | 0.802666 | 5.035092e-49 | -8.615850e-47 |
| Msa0188740 | Msa0472480 | 0.860851 | 1.547651e-63 | -8.615850e-47 |
| Msa0191450 | Msa0472480 | 0.897328 | 1.564457e-76 | -8.615850e-47 |
| Msa0191550 | Msa0472480 | 0.896722 | 2.807765e-76 | -8.615850e-47 |
| Msa0192050 | Msa0472480 | 0.801099 | 1.056376e-48 | -8.615850e-47 |
| Msa0192300 | Msa0472480 | 0.871937 | 4.668707e-67 | -8.615850e-47 |
| Msa0192750 | Msa0472480 | 0.816893 | 4.373466e-52 | -8.615850e-47 |
| Msa0194940 | Msa0472480 | 0.901517 | 2.474162e-78 | -8.615850e-47 |
| Msa0195030 | Msa0472480 | 0.839370 | 1.650169e-57 | -8.615850e-47 |
| Msa0210360 | Msa0472480 | 0.821124 | 4.769281e-53 | -8.615850e-47 |
| Msa0216200 | Msa0472480 | 0.806506 | 7.959190e-50 | -8.615850e-47 |
| Msa0219090 | Msa0472480 | 0.809644 | 1.708559e-50 | -8.615850e-47 |
| Msa0222730 | Msa0472480 | 0.824093 | 9.728740e-54 | -8.615850e-47 |
| Msa0233550 | Msa0472480 | 0.842384 | 2.672492e-58 | -8.615850e-47 |
| Msa0235050 | Msa0472480 | 0.834861 | 2.345809e-56 | -8.615850e-47 |
| Msa0237180 | Msa0472480 | 0.823405 | 1.409735e-53 | -8.615850e-47 |
| Msa0369410 | Msa0472480 | 0.880901 | 3.746928e-70 | -8.615850e-47 |
| Msa0371490 | Msa0472480 | 0.871417 | 6.944210e-67 | -8.615850e-47 |
| Msa0377370 | Msa0472480 | 0.823079 | 1.679977e-53 | -8.615850e-47 |
| Msa0377520 | Msa0472480 | 0.865981 | 3.979171e-65 | -8.615850e-47 |
| Msa0382670 | Msa0472480 | 0.836368 | 9.751776e-57 | -8.615850e-47 |
| Msa0382960 | Msa0472480 | 0.805714 | 1.168436e-49 | -8.615850e-47 |
| Msa0388520 | Msa0472480 | 0.803062 | 4.169273e-49 | -8.615850e-47 |
| Msa0419710 | Msa0472480 | 0.802841 | 4.633079e-49 | -8.615850e-47 |
| Msa0426090 | Msa0472480 | 0.997708 | 1.330153e-247 | -8.615850e-47 |
| Msa0426250 | Msa0472480 | 0.968365 | 1.422032e-128 | -8.615850e-47 |
| Msa0430130 | Msa0472480 | 0.801350 | 9.387124e-49 | -8.615850e-47 |
| Msa0432750 | Msa0472480 | 0.804633 | 1.967024e-49 | -8.615850e-47 |
| Msa0450150 | Msa0472480 | 0.811783 | 5.890510e-51 | -8.615850e-47 |
| Msa0463520 | Msa0472480 | 0.849945 | 2.334792e-60 | -8.615850e-47 |
| Msa0472480 | Msa0475810 | 0.904252 | 1.489753e-79 | -8.615850e-47 |
| Msa0472480 | Msa0481520 | 0.893099 | 8.617082e-75 | -8.615850e-47 |
| Msa0472480 | Msa0482560 | 0.836575 | 8.633525e-57 | -8.615850e-47 |
| Msa0472480 | Msa0485220 | 0.829279 | 5.625045e-55 | -8.615850e-47 |
| Msa0472480 | Msa0511760 | 0.826506 | 2.613364e-54 | -8.615850e-47 |
| Msa0472480 | Msa0517480 | 0.867491 | 1.315825e-65 | -8.615850e-47 |
| Msa0472480 | Msa0529900 | 0.839477 | 1.547841e-57 | -8.615850e-47 |
| Msa0472480 | Msa0540480 | 0.816406 | 5.620663e-52 | -8.615850e-47 |
| Msa0472480 | Msa0547920 | 0.884305 | 2.148032e-71 | -8.615850e-47 |
| Msa0472480 | Msa0550420 | 0.822310 | 2.537262e-53 | -8.615850e-47 |
| Msa0472480 | Msa0573550 | 0.911419 | 6.215818e-83 | -8.615850e-47 |
| Msa0472480 | Msa0574780 | 0.843523 | 1.330187e-58 | -8.615850e-47 |
| Msa0472480 | Msa0578010 | 0.816311 | 5.904771e-52 | -8.615850e-47 |
| Msa0472480 | Msa0579830 | 0.819157 | 1.345779e-52 | -8.615850e-47 |
| Msa0472480 | Msa0582070 | 0.873187 | 1.786243e-67 | -8.615850e-47 |
| Msa0472480 | Msa0591050 | 0.815707 | 8.051744e-52 | -8.615850e-47 |
| Msa0472480 | Msa0596370 | 0.825119 | 5.575783e-54 | -8.615850e-47 |
| Msa0472480 | Msa0597240 | 0.900974 | 4.278809e-78 | -8.615850e-47 |
| Msa0472480 | Msa0602900 | 0.872838 | 2.338279e-67 | -8.615850e-47 |
| Msa0472480 | Msa0605890 | 0.867112 | 1.739410e-65 | -8.615850e-47 |
| Msa0472480 | Msa0619230 | 0.906861 | 9.436545e-81 | -8.615850e-47 |
| Msa0472480 | Msa0621190 | 0.826909 | 2.094102e-54 | -8.615850e-47 |
| Msa0472480 | Msa0622230 | 0.825990 | 3.468136e-54 | -8.615850e-47 |
| Msa0472480 | Msa0643960 | 0.873239 | 1.714656e-67 | -8.615850e-47 |
| Msa0472480 | Msa0648620 | 0.806667 | 7.359428e-50 | -8.615850e-47 |
| Msa0472480 | Msa0648670 | 0.819092 | 1.392764e-52 | -8.615850e-47 |
| Msa0472480 | Msa0649890 | 0.817908 | 2.583783e-52 | -8.615850e-47 |
| Msa0472480 | Msa0653060 | 0.872709 | 2.581523e-67 | -8.615850e-47 |
| Msa0472480 | Msa0656450 | 0.808838 | 2.543476e-50 | -8.615850e-47 |
| Msa0472480 | Msa0681220 | 0.824704 | 6.986460e-54 | -8.615850e-47 |
| Msa0472480 | Msa0686550 | 0.844418 | 7.654073e-59 | -8.615850e-47 |
| Msa0472480 | Msa0694400 | 0.894799 | 1.755373e-75 | -8.615850e-47 |
| Msa0472480 | Msa0704860 | 0.871176 | 8.338941e-67 | -8.615850e-47 |
| Msa0472480 | Msa0705800 | 0.843773 | 1.139951e-58 | -8.615850e-47 |
| Msa0472480 | Msa0708630 | 0.883558 | 4.052768e-71 | -8.615850e-47 |
| Msa0472480 | Msa0717380 | 0.832011 | 1.205555e-55 | -8.615850e-47 |
| Msa0472480 | Msa0718560 | 0.801819 | 7.519790e-49 | -8.615850e-47 |
| Msa0472480 | Msa0748350 | 0.831180 | 1.931994e-55 | -8.615850e-47 |
| Msa0472480 | Msa0758420 | 0.852262 | 5.181202e-61 | -8.615850e-47 |
| Msa0472480 | Msa0788380 | 0.899696 | 1.535188e-77 | -8.615850e-47 |
| Msa0472480 | Msa0790450 | 0.889461 | 2.372285e-73 | -8.615850e-47 |
| Msa0472480 | Msa0799830 | 0.855650 | 5.472190e-62 | -8.615850e-47 |
| Msa0472480 | Msa0822580 | 0.834028 | 3.798813e-56 | -8.615850e-47 |
| Msa0472480 | Msa0834220 | 0.848191 | 7.171083e-60 | -8.615850e-47 |
| Msa0472480 | Msa0838070 | 0.866955 | 1.952658e-65 | -8.615850e-47 |
| Msa0472480 | Msa0861320 | 0.833655 | 4.708483e-56 | -8.615850e-47 |
| Msa0472480 | Msa0880050 | 0.814117 | 1.814125e-51 | -8.615850e-47 |
| Msa0472480 | Msa0927910 | 0.800574 | 1.352227e-48 | -8.615850e-47 |
| Msa0472480 | Msa0929680 | 0.847724 | 9.646255e-60 | -8.615850e-47 |
| Msa0472480 | Msa0929700 | 0.912443 | 1.937551e-83 | -8.615850e-47 |
| Msa0472480 | Msa0930100 | 0.823884 | 1.089191e-53 | -8.615850e-47 |
| Msa0472480 | Msa0930360 | 0.840209 | 9.980262e-58 | -8.615850e-47 |
| Msa0472480 | Msa0930790 | 0.851835 | 6.850579e-61 | -8.615850e-47 |
| Msa0472480 | Msa0930890 | 0.819259 | 1.275693e-52 | -8.615850e-47 |
| Msa0472480 | Msa1019110 | 0.815864 | 7.431401e-52 | -8.615850e-47 |
| Msa0472480 | Msa1025200 | 0.818317 | 2.087665e-52 | -8.615850e-47 |
| Msa0472480 | Msa1025220 | 0.814998 | 1.157591e-51 | -8.615850e-47 |
| Msa0472480 | Msa1037290 | 0.852710 | 3.860455e-61 | -8.615850e-47 |
| Msa0472480 | Msa1040160 | 0.920527 | 1.143161e-87 | -8.615850e-47 |
| Msa0472480 | Msa1041680 | 0.907333 | 5.676212e-81 | -8.615850e-47 |
| Msa0472480 | Msa1042100 | 0.850749 | 1.388182e-60 | -8.615850e-47 |
| Msa0472480 | Msa1047020 | 0.801011 | 1.101137e-48 | -8.615850e-47 |
| Msa0472480 | Msa1050100 | 0.831890 | 1.291214e-55 | -8.615850e-47 |
| Msa0472480 | Msa1054280 | 0.872830 | 2.351938e-67 | -8.615850e-47 |
| Msa0472480 | Msa1058700 | 0.803061 | 4.171774e-49 | -8.615850e-47 |
| Msa0472480 | Msa1078980 | 0.825879 | 3.684860e-54 | -8.615850e-47 |
| Msa0472480 | Msa1079910 | 0.802443 | 5.597215e-49 | -8.615850e-47 |
| Msa0472480 | Msa1082050 | 0.823220 | 1.557349e-53 | -8.615850e-47 |
| Msa0472480 | Msa1082170 | 0.862275 | 5.688891e-64 | -8.615850e-47 |
| Msa0472480 | Msa1083370 | 0.919236 | 5.791993e-87 | -8.615850e-47 |
| Msa0472480 | Msa1089220 | 0.810945 | 8.953181e-51 | -8.615850e-47 |
| Msa0472480 | Msa1096900 | 0.805108 | 1.565278e-49 | -8.615850e-47 |
| Msa0472480 | Msa1116940 | 0.859821 | 3.171249e-63 | -8.615850e-47 |
| Msa0472480 | Msa1124850 | 0.807249 | 5.543305e-50 | -8.615850e-47 |
| Msa0472480 | Msa1124980 | 0.809584 | 1.760428e-50 | -8.615850e-47 |
| Msa0472480 | Msa1126520 | 0.832948 | 7.062369e-56 | -8.615850e-47 |
| Msa0472480 | Msa1126690 | 0.843098 | 1.726438e-58 | -8.615850e-47 |
| Msa0472480 | Msa1131030 | 0.814008 | 1.916749e-51 | -8.615850e-47 |
| Msa0472480 | Msa1136880 | 0.815419 | 9.334831e-52 | -8.615850e-47 |
| Msa0472480 | Msa1136980 | 0.803958 | 2.718973e-49 | -8.615850e-47 |
| Msa0472480 | Msa1156830 | 0.837020 | 6.649270e-57 | -8.615850e-47 |
| Msa0472480 | Msa1164150 | 0.861632 | 8.949424e-64 | -8.615850e-47 |
| Msa0472480 | Msa1165640 | 0.826861 | 2.149982e-54 | -8.615850e-47 |
| Msa0472480 | Msa1166570 | 0.909511 | 5.256371e-82 | -8.615850e-47 |
| Msa0472480 | Msa1167360 | 0.817068 | 3.994926e-52 | -8.615850e-47 |
| Msa0472480 | Msa1167540 | 0.827835 | 1.256284e-54 | -8.615850e-47 |
| Msa0472480 | Msa1167550 | 0.827020 | 1.970147e-54 | -8.615850e-47 |
| Msa0472480 | Msa1169180 | 0.816845 | 4.482981e-52 | -8.615850e-47 |
| Msa0472480 | Msa1180000 | 0.864690 | 1.013969e-64 | -8.615850e-47 |
| Msa0472480 | Msa1186030 | 0.884281 | 2.192321e-71 | -8.615850e-47 |
| Msa0472480 | Msa1206240 | 0.840495 | 8.402691e-58 | -8.615850e-47 |
| Msa0472480 | Msa1213850 | 0.822744 | 2.010781e-53 | -8.615850e-47 |
| Msa0472480 | Msa1218170 | 0.842603 | 2.337665e-58 | -8.615850e-47 |
| Msa0472480 | Msa1227080 | 0.829754 | 4.312328e-55 | -8.615850e-47 |
| Msa0472480 | Msa1235950 | 0.857398 | 1.677304e-62 | -8.615850e-47 |
| Msa0472480 | Msa1235980 | 0.864971 | 8.279464e-65 | -8.615850e-47 |
| Msa0472480 | Msa1237040 | 0.911132 | 8.588551e-83 | -8.615850e-47 |
| Msa0472480 | Msa1240270 | 0.861859 | 7.628884e-64 | -8.615850e-47 |
| Msa0472480 | Msa1258540 | 0.872852 | 2.313441e-67 | -8.615850e-47 |
| Msa0472480 | Msa1270640 | 0.846311 | 2.352238e-59 | -8.615850e-47 |
| Msa0472480 | Msa1270710 | 0.844856 | 5.832586e-59 | -8.615850e-47 |
| Msa0472480 | Msa1278130 | 0.879025 | 1.743960e-69 | -8.615850e-47 |
| Msa0472480 | Msa1284060 | 0.837433 | 5.212974e-57 | -8.615850e-47 |
| Msa0472480 | Msa1311400 | 0.844410 | 7.689966e-59 | -8.615850e-47 |
| Msa0472480 | Msa1316100 | 0.831016 | 2.119420e-55 | -8.615850e-47 |
| Msa0472480 | Msa1317390 | 0.902668 | 7.661636e-79 | -8.615850e-47 |
| Msa0472480 | Msa1341780 | 0.846933 | 1.590566e-59 | -8.615850e-47 |
| Msa0472480 | Msa1351020 | 0.880831 | 3.967749e-70 | -8.615850e-47 |
| Msa0472480 | Msa1351910 | 0.837030 | 6.609973e-57 | -8.615850e-47 |
| Msa0472480 | Msa1358710 | 0.844956 | 5.482968e-59 | -8.615850e-47 |
| Msa0472480 | Msa1363910 | 0.862103 | 6.420902e-64 | -8.615850e-47 |
| Msa0472480 | Msa1364110 | 0.832288 | 1.029591e-55 | -8.615850e-47 |
| Msa0472480 | Msa1367540 | 0.800448 | 1.434554e-48 | -8.615850e-47 |
| Msa0472480 | Msa1368920 | 0.854086 | 1.555909e-61 | -8.615850e-47 |
| Msa0472480 | Msa1371410 | 0.812015 | 5.244243e-51 | -8.615850e-47 |
| Msa0472480 | Msa1385480 | 0.869490 | 2.977883e-66 | -8.615850e-47 |
| Msa0472480 | Msa1387750 | 0.810940 | 8.975699e-51 | -8.615850e-47 |
| Msa0472480 | Msa1390760 | 0.905192 | 5.565173e-80 | -8.615850e-47 |
| Msa0472480 | Msa1402410 | 0.803910 | 2.781965e-49 | -8.615850e-47 |
| Msa0472480 | Msa1403910 | 0.805547 | 1.266188e-49 | -8.615850e-47 |
| Msa0472480 | Msa1407550 | 0.821995 | 3.001802e-53 | -8.615850e-47 |
| Msa0472480 | Msa1410570 | 0.824114 | 9.616788e-54 | -8.615850e-47 |
| Msa0472480 | Msa1413570 | 0.814789 | 1.288033e-51 | -8.615850e-47 |
| Msa0472480 | Msa1415620 | 0.810602 | 1.062573e-50 | -8.615850e-47 |
| Msa0472480 | Msa1423050 | 0.813221 | 2.856104e-51 | -8.615850e-47 |
| Msa0472480 | Msa1424570 | 0.846577 | 1.990639e-59 | -8.615850e-47 |
| Msa0472480 | Msa1425070 | 0.826486 | 2.642430e-54 | -8.615850e-47 |
| Msa0472480 | Msa1432310 | 0.856564 | 2.953902e-62 | -8.615850e-47 |
| Msa0472480 | Msa1446410 | 0.838141 | 3.430102e-57 | -8.615850e-47 |
| Msa0472480 | Msa1449160 | 0.871174 | 8.354922e-67 | -8.615850e-47 |
| Msa0472480 | Msa1450560 | 0.895319 | 1.073022e-75 | -8.615850e-47 |
| Msa0472480 | Msa1453530 | 0.856592 | 2.899032e-62 | -8.615850e-47 |
| Msa0472480 | Msa1463570 | 0.876353 | 1.494120e-68 | -8.615850e-47 |
| Msa0472480 | Msa1465700 | 0.872204 | 3.805346e-67 | -8.615850e-47 |
| Msa0239420 | Msa0472480 | 0.841664 | 4.143814e-58 | -8.615850e-47 |
| Msa0264640 | Msa0472480 | 0.813894 | 2.031588e-51 | -8.615850e-47 |
| Msa0265250 | Msa0472480 | 0.820272 | 7.488477e-53 | -8.615850e-47 |
| Msa0270160 | Msa0472480 | 0.850730 | 1.405278e-60 | -8.615850e-47 |
| Msa0274940 | Msa0472480 | 0.803721 | 3.045008e-49 | -8.615850e-47 |
| Msa0277600 | Msa0472480 | 0.857858 | 1.225820e-62 | -8.615850e-47 |
| Msa0281330 | Msa0472480 | 0.840336 | 9.245131e-58 | -8.615850e-47 |
| Msa0281370 | Msa0472480 | 0.868527 | 6.113445e-66 | -8.615850e-47 |
| Msa0297830 | Msa0472480 | 0.816098 | 6.588395e-52 | -8.615850e-47 |
| Msa0301220 | Msa0472480 | 0.882510 | 9.804274e-71 | -8.615850e-47 |
| Msa0301250 | Msa0472480 | 0.875663 | 2.580937e-68 | -8.615850e-47 |
| Msa0312210 | Msa0472480 | 0.819818 | 9.509636e-53 | -8.615850e-47 |
| Msa0313060 | Msa0472480 | 0.879646 | 1.051106e-69 | -8.615850e-47 |
| Msa0315430 | Msa0472480 | 0.880978 | 3.516215e-70 | -8.615850e-47 |
| Msa0315660 | Msa0472480 | 0.824441 | 8.060537e-54 | -8.615850e-47 |
| Msa0335840 | Msa0472480 | 0.828112 | 1.077477e-54 | -8.615850e-47 |
| Msa0340560 | Msa0472480 | 0.847955 | 8.334073e-60 | -8.615850e-47 |
| Msa0346090 | Msa0472480 | 0.820783 | 5.716068e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472480 | MtrunA17_Chr3g0128201 | 99.482 | 193 | 1 | 0 | 1 | 193 | 1 | 193 | 5.81e-139 | 385 |
| Msa0472480 | MtrunA17_Chr5g0428861 | 87.500 | 192 | 24 | 0 | 1 | 192 | 1 | 192 | 1.08e-126 | 354 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472480 | AT1G33140.1 | 87.113 | 194 | 24 | 1 | 1 | 193 | 1 | 194 | 9.78e-122 | 342 |
| Msa0472480 | AT1G33120.1 | 87.113 | 194 | 24 | 1 | 1 | 193 | 1 | 194 | 9.78e-122 | 342 |
| Msa0472480 | AT4G10450.1 | 84.536 | 194 | 29 | 1 | 1 | 193 | 1 | 194 | 2.63e-120 | 338 |
| Msa0472480 | AT4G10450.2 | 84.337 | 166 | 25 | 1 | 1 | 165 | 1 | 166 | 2.47e-101 | 290 |
Find 69 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGTCTGGTTATTTATTT+TGG | 0.141372 | 3_3:+74885006 | Msa0472480:three_prime_UTR |
| AGCTCAGTTCGTTAAATTAT+TGG | 0.181439 | 3_3:+74884785 | Msa0472480:three_prime_UTR |
| AGATTTATTCCATGCATTTA+AGG | 0.197129 | 3_3:-74885077 | None:intergenic |
| ATTGAGATCCGAAACTTTCT+TGG | 0.238218 | 3_3:+74883832 | Msa0472480:CDS |
| TTAAGGTAACACATGAAATA+TGG | 0.266488 | 3_3:-74885060 | None:intergenic |
| TTACATTTGCTTGTTGAGTT+TGG | 0.269604 | 3_3:+74884666 | Msa0472480:three_prime_UTR |
| GGTGAAGGATGAGGTTGTTT+TGG | 0.319250 | 3_3:+74884311 | Msa0472480:CDS |
| ATGACATTGAGCTTGTTTCT+AGG | 0.326351 | 3_3:+74884340 | Msa0472480:CDS |
| ATTCAAGTTTCTGTTGGTCT+TGG | 0.332651 | 3_3:+74884606 | Msa0472480:three_prime_UTR |
| TCGATGCCTGGTTCGGTTCC+AGG | 0.334604 | 3_3:+74883668 | Msa0472480:CDS |
| GTCAGGGATGTTCATGGTTT+CGG | 0.351741 | 3_3:-74883512 | None:intergenic |
| TCTTCTCTCCAAGAAAGTTT+CGG | 0.365793 | 3_3:-74883840 | None:intergenic |
| TTCTATATGTTTGAAATGAT+AGG | 0.374982 | 3_3:+74884971 | Msa0472480:three_prime_UTR |
| ACCTTGATGCTAACGCCGTC+AGG | 0.384134 | 3_3:-74883529 | None:intergenic |
| CTTCTTCTTGCCTTCTTCAT+CGG | 0.396628 | 3_3:-74883638 | None:intergenic |
| CTCAATCGACTTGTTGTCAT+TGG | 0.397158 | 3_3:-74883815 | None:intergenic |
| GGTATTTATGTTAGTGAGAA+GGG | 0.433044 | 3_3:+74884522 | Msa0472480:CDS |
| AGTTTCTGTTGGTCTTGGAT+TGG | 0.433152 | 3_3:+74884611 | Msa0472480:three_prime_UTR |
| ATTGGTGATGCTAGCGTTGA+TGG | 0.438976 | 3_3:-74883797 | None:intergenic |
| ATGTTAAGAAGAAGGATATC+AGG | 0.444332 | 3_3:+74884487 | Msa0472480:CDS |
| CTCAAGATCGATGCCTGGTT+CGG | 0.447724 | 3_3:+74883661 | Msa0472480:CDS |
| GATATCAGGAAGTTTCTTGA+TGG | 0.450730 | 3_3:+74884501 | Msa0472480:CDS |
| AGGAAAGTAGATTTGCTTGA+TGG | 0.454716 | 3_3:+74884264 | Msa0472480:CDS |
| AGTTTAATTCAAGTTTCTGT+TGG | 0.456312 | 3_3:+74884600 | Msa0472480:three_prime_UTR |
| AGCAGTTCTGATGGCGGCGG+AGG | 0.457127 | 3_3:-74883695 | None:intergenic |
| TCTGTGTTTGCAGCACTCTC+CGG | 0.465365 | 3_3:-74883431 | None:intergenic |
| TGGTTAAATAATGCACTGAA+TGG | 0.480150 | 3_3:+74884860 | Msa0472480:three_prime_UTR |
| GGTGGTAACTGAAGAATAGA+TGG | 0.489244 | 3_3:+74884548 | Msa0472480:exon |
| AACGCCGTCAGGGATGTTCA+TGG | 0.489928 | 3_3:-74883518 | None:intergenic |
| GAAAGCTCAGAGTATGAGTC+TGG | 0.491000 | 3_3:+74884993 | Msa0472480:three_prime_UTR |
| AAACTTTCTTGGAGAGAAGA+AGG | 0.493598 | 3_3:+74883843 | Msa0472480:CDS |
| GATCTCATCACCGATGAAGA+AGG | 0.495068 | 3_3:+74883628 | Msa0472480:CDS |
| GAAATGCCATGTTAAGAAGA+AGG | 0.499506 | 3_3:+74884479 | Msa0472480:intron |
| CCCTGACGGCGTTAGCATCA+AGG | 0.507605 | 3_3:+74883528 | Msa0472480:CDS |
| CATGTGTTACCTTAAATGCA+TGG | 0.524495 | 3_3:+74885068 | Msa0472480:three_prime_UTR |
| TTCAATTGTTCGATCTGAGA+AGG | 0.526562 | 3_3:+74884290 | Msa0472480:CDS |
| TGGAAATCTCACACACTCTA+CGG | 0.531126 | 3_3:-74883458 | None:intergenic |
| TGGTATTTATGTTAGTGAGA+AGG | 0.531892 | 3_3:+74884521 | Msa0472480:CDS |
| TGATATCCTTCTTCTTAACA+TGG | 0.532081 | 3_3:-74884485 | None:intergenic |
| CATGGTTTCGGAGGAGAGGA+TGG | 0.534778 | 3_3:-74883500 | None:intergenic |
| TTGGTGATGCTAGCGTTGAT+GGG | 0.543746 | 3_3:-74883796 | None:intergenic |
| TTATGTTAGTGAGAAGGGAT+CGG | 0.552761 | 3_3:+74884527 | Msa0472480:CDS |
| CACGTTGAGAATCTCATCAC+TGG | 0.554104 | 3_3:+74883724 | Msa0472480:CDS |
| CATCTTGTAGCGGAAACCCT+TGG | 0.556289 | 3_3:-74883752 | None:intergenic |
| AGGGTTTCCGCTACAAGATG+AGG | 0.564650 | 3_3:+74883755 | Msa0472480:CDS |
| ATCTGAGAAGGTGAAGGATG+AGG | 0.567425 | 3_3:+74884302 | Msa0472480:CDS |
| GAGAGCAGTTCTGATGGCGG+CGG | 0.574544 | 3_3:-74883698 | None:intergenic |
| CTCATCACTGGTGTCACCAA+GGG | 0.576975 | 3_3:+74883736 | Msa0472480:CDS |
| GTGGCTGAGAGCAGTTCTGA+TGG | 0.581831 | 3_3:-74883704 | None:intergenic |
| TGTTCATGGTTTCGGAGGAG+AGG | 0.584113 | 3_3:-74883504 | None:intergenic |
| TAGCATCAAGGTTAACGCTA+AGG | 0.586158 | 3_3:+74883540 | Msa0472480:CDS |
| AGAAGCTCAAGATCGATGCC+TGG | 0.588777 | 3_3:+74883656 | Msa0472480:CDS |
| CCTTGATGCTAACGCCGTCA+GGG | 0.590861 | 3_3:-74883528 | None:intergenic |
| TTTACAAATAAAATTGACCA+CGG | 0.594223 | 3_3:-74885036 | None:intergenic |
| TCGAAGTCGAAGGACCTCGC+GGG | 0.613305 | 3_3:+74883566 | Msa0472480:CDS |
| AGGGATGTTCATGGTTTCGG+AGG | 0.621327 | 3_3:-74883509 | None:intergenic |
| TCTCATCACTGGTGTCACCA+AGG | 0.623987 | 3_3:+74883735 | Msa0472480:CDS |
| GTCATGTGCACTTATTAACC+AGG | 0.625933 | 3_3:+74884362 | Msa0472480:CDS |
| TGTTCGATCTGAGAAGGTGA+AGG | 0.628133 | 3_3:+74884296 | Msa0472480:CDS |
| GCTAAGGTCATCGAAGTCGA+AGG | 0.640211 | 3_3:+74883556 | Msa0472480:CDS |
| TGTTAGTGAGAAGGGATCGG+TGG | 0.651106 | 3_3:+74884530 | Msa0472480:CDS |
| ATCGAAGTCGAAGGACCTCG+CGG | 0.660265 | 3_3:+74883565 | Msa0472480:CDS |
| TGGTGATGCTAGCGTTGATG+GGG | 0.676063 | 3_3:-74883795 | None:intergenic |
| GCTGAGAGCAGTTCTGATGG+CGG | 0.677632 | 3_3:-74883701 | None:intergenic |
| CGGTGATGAGATCAAAATCG+AGG | 0.680504 | 3_3:-74883618 | None:intergenic |
| ACACAAACCTCATCTTGTAG+CGG | 0.691692 | 3_3:-74883762 | None:intergenic |
| GAAACCATGAACATCCCTGA+CGG | 0.701649 | 3_3:+74883514 | Msa0472480:CDS |
| CAGTGATGAGATTCTCAACG+TGG | 0.725921 | 3_3:-74883723 | None:intergenic |
| TCACGAACAAGCTTCCCGCG+AGG | 0.748381 | 3_3:-74883580 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATTAGATTAAAACTA+GGG | - | chr3_3:74883988-74884007 | None:intergenic | 10.0% |
| !! | TTATAAATTAGATTAAAACT+AGG | - | chr3_3:74883989-74884008 | None:intergenic | 10.0% |
| !! | TATAAATTAGATTAAAACTA+GGG | - | chr3_3:74883988-74884007 | None:intergenic | 10.0% |
| !! | TTATAAATTAGATTAAAACT+AGG | - | chr3_3:74883989-74884008 | None:intergenic | 10.0% |
| !!! | TATTGTTCTTATATGTTTTA+AGG | + | chr3_3:74884734-74884753 | Msa0472480:three_prime_UTR | 15.0% |
| !!! | TATTGTTCTTATATGTTTTA+AGG | + | chr3_3:74884734-74884753 | Msa0472480:three_prime_UTR | 15.0% |
| !!! | TCTTTAATTTCTTCAGTTTT+AGG | + | chr3_3:74883898-74883917 | Msa0472480:intron | 20.0% |
| !!! | AAATGAGTTAATCTTTTATC+TGG | + | chr3_3:74884100-74884119 | Msa0472480:intron | 20.0% |
| !! | GAGATAATGTCTAATTTATT+TGG | + | chr3_3:74884166-74884185 | Msa0472480:intron | 20.0% |
| !! | ACAAAAATAAAACATGTTCA+TGG | - | chr3_3:74884406-74884425 | None:intergenic | 20.0% |
| !!! | TTTGGAATTTTTGGTTATTT+TGG | + | chr3_3:74884684-74884703 | Msa0472480:three_prime_UTR | 20.0% |
| !!! | TTCTATATGTTTGAAATGAT+AGG | + | chr3_3:74884971-74884990 | Msa0472480:three_prime_UTR | 20.0% |
| !! | TTTACAAATAAAATTGACCA+CGG | - | chr3_3:74885039-74885058 | None:intergenic | 20.0% |
| !!! | TCTTTAATTTCTTCAGTTTT+AGG | + | chr3_3:74883898-74883917 | Msa0472480:intron | 20.0% |
| !!! | AAATGAGTTAATCTTTTATC+TGG | + | chr3_3:74884100-74884119 | Msa0472480:intron | 20.0% |
| !! | GAGATAATGTCTAATTTATT+TGG | + | chr3_3:74884166-74884185 | Msa0472480:intron | 20.0% |
| !! | ACAAAAATAAAACATGTTCA+TGG | - | chr3_3:74884406-74884425 | None:intergenic | 20.0% |
| !!! | TTTGGAATTTTTGGTTATTT+TGG | + | chr3_3:74884684-74884703 | Msa0472480:three_prime_UTR | 20.0% |
| !!! | TTCTATATGTTTGAAATGAT+AGG | + | chr3_3:74884971-74884990 | Msa0472480:three_prime_UTR | 20.0% |
| !! | TTTACAAATAAAATTGACCA+CGG | - | chr3_3:74885039-74885058 | None:intergenic | 20.0% |
| ! | GTCTAATTTATTTGGTTATC+TGG | + | chr3_3:74884174-74884193 | Msa0472480:intron | 25.0% |
| ! | GAATCGAATAATGTTGTATT+AGG | + | chr3_3:74884239-74884258 | Msa0472480:intron | 25.0% |
| !! | AGTTTAATTCAAGTTTCTGT+TGG | + | chr3_3:74884600-74884619 | Msa0472480:three_prime_UTR | 25.0% |
| !!! | GTTATTTTGGTTTTCTCTAT+TGG | + | chr3_3:74884697-74884716 | Msa0472480:three_prime_UTR | 25.0% |
| !! | GTTTTCATTGAATTATTCAG+TGG | + | chr3_3:74884840-74884859 | Msa0472480:three_prime_UTR | 25.0% |
| !! | ATGAGTCTGGTTATTTATTT+TGG | + | chr3_3:74885006-74885025 | Msa0472480:three_prime_UTR | 25.0% |
| ! | TTAAGGTAACACATGAAATA+TGG | - | chr3_3:74885063-74885082 | None:intergenic | 25.0% |
| ! | AGATTTATTCCATGCATTTA+AGG | - | chr3_3:74885080-74885099 | None:intergenic | 25.0% |
| ! | GTCTAATTTATTTGGTTATC+TGG | + | chr3_3:74884174-74884193 | Msa0472480:intron | 25.0% |
| ! | GAATCGAATAATGTTGTATT+AGG | + | chr3_3:74884239-74884258 | Msa0472480:intron | 25.0% |
| !! | AGTTTAATTCAAGTTTCTGT+TGG | + | chr3_3:74884600-74884619 | Msa0472480:three_prime_UTR | 25.0% |
| !!! | GTTATTTTGGTTTTCTCTAT+TGG | + | chr3_3:74884697-74884716 | Msa0472480:three_prime_UTR | 25.0% |
| !! | GTTTTCATTGAATTATTCAG+TGG | + | chr3_3:74884840-74884859 | Msa0472480:three_prime_UTR | 25.0% |
| !! | ATGAGTCTGGTTATTTATTT+TGG | + | chr3_3:74885006-74885025 | Msa0472480:three_prime_UTR | 25.0% |
| ! | TTAAGGTAACACATGAAATA+TGG | - | chr3_3:74885063-74885082 | None:intergenic | 25.0% |
| ! | AGATTTATTCCATGCATTTA+AGG | - | chr3_3:74885080-74885099 | None:intergenic | 25.0% |
| !!! | GTCTTCATTTTTTGATACTG+TGG | - | chr3_3:74883481-74883500 | None:intergenic | 30.0% |
| ! | TTTACTAGTTTGAGAATCTG+TGG | + | chr3_3:74884212-74884231 | Msa0472480:intron | 30.0% |
| GAATAATGTTGTATTAGGTG+AGG | + | chr3_3:74884244-74884263 | Msa0472480:intron | 30.0% | |
| TGATATCCTTCTTCTTAACA+TGG | - | chr3_3:74884488-74884507 | None:intergenic | 30.0% | |
| ATGTTAAGAAGAAGGATATC+AGG | + | chr3_3:74884487-74884506 | Msa0472480:CDS | 30.0% | |
| TGGTATTTATGTTAGTGAGA+AGG | + | chr3_3:74884521-74884540 | Msa0472480:CDS | 30.0% | |
| GGTATTTATGTTAGTGAGAA+GGG | + | chr3_3:74884522-74884541 | Msa0472480:CDS | 30.0% | |
| ! | TTACATTTGCTTGTTGAGTT+TGG | + | chr3_3:74884666-74884685 | Msa0472480:three_prime_UTR | 30.0% |
| !! | CTTGTTGAGTTTGGAATTTT+TGG | + | chr3_3:74884675-74884694 | Msa0472480:three_prime_UTR | 30.0% |
| AGCTCAGTTCGTTAAATTAT+TGG | + | chr3_3:74884785-74884804 | Msa0472480:three_prime_UTR | 30.0% | |
| TGGTTAAATAATGCACTGAA+TGG | + | chr3_3:74884860-74884879 | Msa0472480:three_prime_UTR | 30.0% | |
| !!! | GTCTTCATTTTTTGATACTG+TGG | - | chr3_3:74883481-74883500 | None:intergenic | 30.0% |
| ! | TTTACTAGTTTGAGAATCTG+TGG | + | chr3_3:74884212-74884231 | Msa0472480:intron | 30.0% |
| GAATAATGTTGTATTAGGTG+AGG | + | chr3_3:74884244-74884263 | Msa0472480:intron | 30.0% | |
| TGATATCCTTCTTCTTAACA+TGG | - | chr3_3:74884488-74884507 | None:intergenic | 30.0% | |
| ATGTTAAGAAGAAGGATATC+AGG | + | chr3_3:74884487-74884506 | Msa0472480:CDS | 30.0% | |
| TGGTATTTATGTTAGTGAGA+AGG | + | chr3_3:74884521-74884540 | Msa0472480:CDS | 30.0% | |
| GGTATTTATGTTAGTGAGAA+GGG | + | chr3_3:74884522-74884541 | Msa0472480:CDS | 30.0% | |
| ! | TTACATTTGCTTGTTGAGTT+TGG | + | chr3_3:74884666-74884685 | Msa0472480:three_prime_UTR | 30.0% |
| !! | CTTGTTGAGTTTGGAATTTT+TGG | + | chr3_3:74884675-74884694 | Msa0472480:three_prime_UTR | 30.0% |
| AGCTCAGTTCGTTAAATTAT+TGG | + | chr3_3:74884785-74884804 | Msa0472480:three_prime_UTR | 30.0% | |
| TGGTTAAATAATGCACTGAA+TGG | + | chr3_3:74884860-74884879 | Msa0472480:three_prime_UTR | 30.0% | |
| ATTGAGATCCGAAACTTTCT+TGG | + | chr3_3:74883832-74883851 | Msa0472480:CDS | 35.0% | |
| TCTTCTCTCCAAGAAAGTTT+CGG | - | chr3_3:74883843-74883862 | None:intergenic | 35.0% | |
| AAACTTTCTTGGAGAGAAGA+AGG | + | chr3_3:74883843-74883862 | Msa0472480:CDS | 35.0% | |
| CACAAACTAGAGTGAAACTA+AGG | - | chr3_3:74883932-74883951 | None:intergenic | 35.0% | |
| ! | AGGAAAGTAGATTTGCTTGA+TGG | + | chr3_3:74884264-74884283 | Msa0472480:CDS | 35.0% |
| TTCAATTGTTCGATCTGAGA+AGG | + | chr3_3:74884290-74884309 | Msa0472480:CDS | 35.0% | |
| ! | ATGACATTGAGCTTGTTTCT+AGG | + | chr3_3:74884340-74884359 | Msa0472480:CDS | 35.0% |
| ATGTTCATGGACCATGTTAA+GGG | - | chr3_3:74884393-74884412 | None:intergenic | 35.0% | |
| !! | GAATGTTGTTGTTGCGTTTT+TGG | + | chr3_3:74884452-74884471 | Msa0472480:intron | 35.0% |
| GAAATGCCATGTTAAGAAGA+AGG | + | chr3_3:74884479-74884498 | Msa0472480:intron | 35.0% | |
| GATATCAGGAAGTTTCTTGA+TGG | + | chr3_3:74884501-74884520 | Msa0472480:CDS | 35.0% | |
| TTATGTTAGTGAGAAGGGAT+CGG | + | chr3_3:74884527-74884546 | Msa0472480:CDS | 35.0% | |
| ! | ATTCAAGTTTCTGTTGGTCT+TGG | + | chr3_3:74884606-74884625 | Msa0472480:three_prime_UTR | 35.0% |
| !!! | TTGGATTGGTTACTGTTTTC+TGG | + | chr3_3:74884625-74884644 | Msa0472480:three_prime_UTR | 35.0% |
| !!! | TTTATTTTGGACGTATTCCG+TGG | + | chr3_3:74885019-74885038 | Msa0472480:three_prime_UTR | 35.0% |
| CATGTGTTACCTTAAATGCA+TGG | + | chr3_3:74885068-74885087 | Msa0472480:three_prime_UTR | 35.0% | |
| ATTGAGATCCGAAACTTTCT+TGG | + | chr3_3:74883832-74883851 | Msa0472480:CDS | 35.0% | |
| TCTTCTCTCCAAGAAAGTTT+CGG | - | chr3_3:74883843-74883862 | None:intergenic | 35.0% | |
| AAACTTTCTTGGAGAGAAGA+AGG | + | chr3_3:74883843-74883862 | Msa0472480:CDS | 35.0% | |
| CACAAACTAGAGTGAAACTA+AGG | - | chr3_3:74883932-74883951 | None:intergenic | 35.0% | |
| ! | AGGAAAGTAGATTTGCTTGA+TGG | + | chr3_3:74884264-74884283 | Msa0472480:CDS | 35.0% |
| TTCAATTGTTCGATCTGAGA+AGG | + | chr3_3:74884290-74884309 | Msa0472480:CDS | 35.0% | |
| ! | ATGACATTGAGCTTGTTTCT+AGG | + | chr3_3:74884340-74884359 | Msa0472480:CDS | 35.0% |
| ATGTTCATGGACCATGTTAA+GGG | - | chr3_3:74884393-74884412 | None:intergenic | 35.0% | |
| !! | GAATGTTGTTGTTGCGTTTT+TGG | + | chr3_3:74884452-74884471 | Msa0472480:intron | 35.0% |
| GAAATGCCATGTTAAGAAGA+AGG | + | chr3_3:74884479-74884498 | Msa0472480:intron | 35.0% | |
| GATATCAGGAAGTTTCTTGA+TGG | + | chr3_3:74884501-74884520 | Msa0472480:CDS | 35.0% | |
| TTATGTTAGTGAGAAGGGAT+CGG | + | chr3_3:74884527-74884546 | Msa0472480:CDS | 35.0% | |
| ! | ATTCAAGTTTCTGTTGGTCT+TGG | + | chr3_3:74884606-74884625 | Msa0472480:three_prime_UTR | 35.0% |
| !!! | TTGGATTGGTTACTGTTTTC+TGG | + | chr3_3:74884625-74884644 | Msa0472480:three_prime_UTR | 35.0% |
| !!! | TTTATTTTGGACGTATTCCG+TGG | + | chr3_3:74885019-74885038 | Msa0472480:three_prime_UTR | 35.0% |
| CATGTGTTACCTTAAATGCA+TGG | + | chr3_3:74885068-74885087 | Msa0472480:three_prime_UTR | 35.0% | |
| TGGAAATCTCACACACTCTA+CGG | - | chr3_3:74883461-74883480 | None:intergenic | 40.0% | |
| TAGCATCAAGGTTAACGCTA+AGG | + | chr3_3:74883540-74883559 | Msa0472480:CDS | 40.0% | |
| CTTCTTCTTGCCTTCTTCAT+CGG | - | chr3_3:74883641-74883660 | None:intergenic | 40.0% | |
| ACACAAACCTCATCTTGTAG+CGG | - | chr3_3:74883765-74883784 | None:intergenic | 40.0% | |
| !! | CTCAATCGACTTGTTGTCAT+TGG | - | chr3_3:74883818-74883837 | None:intergenic | 40.0% |
| !!! | AAGGATGAGGTTGTTTTGGA+TGG | + | chr3_3:74884315-74884334 | Msa0472480:CDS | 40.0% |
| GTCATGTGCACTTATTAACC+AGG | + | chr3_3:74884362-74884381 | Msa0472480:CDS | 40.0% | |
| TGTTCATGGACCATGTTAAG+GGG | - | chr3_3:74884392-74884411 | None:intergenic | 40.0% | |
| CATGTTCATGGACCATGTTA+AGG | - | chr3_3:74884394-74884413 | None:intergenic | 40.0% | |
| GGTGGTAACTGAAGAATAGA+TGG | + | chr3_3:74884548-74884567 | Msa0472480:exon | 40.0% | |
| !! | AGTTTCTGTTGGTCTTGGAT+TGG | + | chr3_3:74884611-74884630 | Msa0472480:three_prime_UTR | 40.0% |
| TGGAAATCTCACACACTCTA+CGG | - | chr3_3:74883461-74883480 | None:intergenic | 40.0% | |
| TAGCATCAAGGTTAACGCTA+AGG | + | chr3_3:74883540-74883559 | Msa0472480:CDS | 40.0% | |
| CTTCTTCTTGCCTTCTTCAT+CGG | - | chr3_3:74883641-74883660 | None:intergenic | 40.0% | |
| ACACAAACCTCATCTTGTAG+CGG | - | chr3_3:74883765-74883784 | None:intergenic | 40.0% | |
| !! | CTCAATCGACTTGTTGTCAT+TGG | - | chr3_3:74883818-74883837 | None:intergenic | 40.0% |
| !!! | AAGGATGAGGTTGTTTTGGA+TGG | + | chr3_3:74884315-74884334 | Msa0472480:CDS | 40.0% |
| GTCATGTGCACTTATTAACC+AGG | + | chr3_3:74884362-74884381 | Msa0472480:CDS | 40.0% | |
| TGTTCATGGACCATGTTAAG+GGG | - | chr3_3:74884392-74884411 | None:intergenic | 40.0% | |
| CATGTTCATGGACCATGTTA+AGG | - | chr3_3:74884394-74884413 | None:intergenic | 40.0% | |
| GGTGGTAACTGAAGAATAGA+TGG | + | chr3_3:74884548-74884567 | Msa0472480:exon | 40.0% | |
| !! | AGTTTCTGTTGGTCTTGGAT+TGG | + | chr3_3:74884611-74884630 | Msa0472480:three_prime_UTR | 40.0% |
| GTCAGGGATGTTCATGGTTT+CGG | - | chr3_3:74883515-74883534 | None:intergenic | 45.0% | |
| GAAACCATGAACATCCCTGA+CGG | + | chr3_3:74883514-74883533 | Msa0472480:CDS | 45.0% | |
| CGGTGATGAGATCAAAATCG+AGG | - | chr3_3:74883621-74883640 | None:intergenic | 45.0% | |
| GATCTCATCACCGATGAAGA+AGG | + | chr3_3:74883628-74883647 | Msa0472480:CDS | 45.0% | |
| CAGTGATGAGATTCTCAACG+TGG | - | chr3_3:74883726-74883745 | None:intergenic | 45.0% | |
| CACGTTGAGAATCTCATCAC+TGG | + | chr3_3:74883724-74883743 | Msa0472480:CDS | 45.0% | |
| !! | TTGGTGATGCTAGCGTTGAT+GGG | - | chr3_3:74883799-74883818 | None:intergenic | 45.0% |
| !! | ATTGGTGATGCTAGCGTTGA+TGG | - | chr3_3:74883800-74883819 | None:intergenic | 45.0% |
| TGTTCGATCTGAGAAGGTGA+AGG | + | chr3_3:74884296-74884315 | Msa0472480:CDS | 45.0% | |
| ATCTGAGAAGGTGAAGGATG+AGG | + | chr3_3:74884302-74884321 | Msa0472480:CDS | 45.0% | |
| ! | GGTGAAGGATGAGGTTGTTT+TGG | + | chr3_3:74884311-74884330 | Msa0472480:CDS | 45.0% |
| GAAAGCTCAGAGTATGAGTC+TGG | + | chr3_3:74884993-74885012 | Msa0472480:three_prime_UTR | 45.0% | |
| GTCAGGGATGTTCATGGTTT+CGG | - | chr3_3:74883515-74883534 | None:intergenic | 45.0% | |
| GAAACCATGAACATCCCTGA+CGG | + | chr3_3:74883514-74883533 | Msa0472480:CDS | 45.0% | |
| CGGTGATGAGATCAAAATCG+AGG | - | chr3_3:74883621-74883640 | None:intergenic | 45.0% | |
| GATCTCATCACCGATGAAGA+AGG | + | chr3_3:74883628-74883647 | Msa0472480:CDS | 45.0% | |
| CAGTGATGAGATTCTCAACG+TGG | - | chr3_3:74883726-74883745 | None:intergenic | 45.0% | |
| CACGTTGAGAATCTCATCAC+TGG | + | chr3_3:74883724-74883743 | Msa0472480:CDS | 45.0% | |
| !! | TTGGTGATGCTAGCGTTGAT+GGG | - | chr3_3:74883799-74883818 | None:intergenic | 45.0% |
| !! | ATTGGTGATGCTAGCGTTGA+TGG | - | chr3_3:74883800-74883819 | None:intergenic | 45.0% |
| TGTTCGATCTGAGAAGGTGA+AGG | + | chr3_3:74884296-74884315 | Msa0472480:CDS | 45.0% | |
| ATCTGAGAAGGTGAAGGATG+AGG | + | chr3_3:74884302-74884321 | Msa0472480:CDS | 45.0% | |
| ! | GGTGAAGGATGAGGTTGTTT+TGG | + | chr3_3:74884311-74884330 | Msa0472480:CDS | 45.0% |
| GAAAGCTCAGAGTATGAGTC+TGG | + | chr3_3:74884993-74885012 | Msa0472480:three_prime_UTR | 45.0% | |
| TCTGTGTTTGCAGCACTCTC+CGG | - | chr3_3:74883434-74883453 | None:intergenic | 50.0% | |
| TGTTCATGGTTTCGGAGGAG+AGG | - | chr3_3:74883507-74883526 | None:intergenic | 50.0% | |
| AGGGATGTTCATGGTTTCGG+AGG | - | chr3_3:74883512-74883531 | None:intergenic | 50.0% | |
| GCTAAGGTCATCGAAGTCGA+AGG | + | chr3_3:74883556-74883575 | Msa0472480:CDS | 50.0% | |
| AGAAGCTCAAGATCGATGCC+TGG | + | chr3_3:74883656-74883675 | Msa0472480:CDS | 50.0% | |
| CTCAAGATCGATGCCTGGTT+CGG | + | chr3_3:74883661-74883680 | Msa0472480:CDS | 50.0% | |
| !! | TCTCATCACTGGTGTCACCA+AGG | + | chr3_3:74883735-74883754 | Msa0472480:CDS | 50.0% |
| !! | CTCATCACTGGTGTCACCAA+GGG | + | chr3_3:74883736-74883755 | Msa0472480:CDS | 50.0% |
| ! | CATCTTGTAGCGGAAACCCT+TGG | - | chr3_3:74883755-74883774 | None:intergenic | 50.0% |
| AGGGTTTCCGCTACAAGATG+AGG | + | chr3_3:74883755-74883774 | Msa0472480:CDS | 50.0% | |
| !! | TGGTGATGCTAGCGTTGATG+GGG | - | chr3_3:74883798-74883817 | None:intergenic | 50.0% |
| ACCAGGTACACCCCTTAACA+TGG | + | chr3_3:74884379-74884398 | Msa0472480:intron | 50.0% | |
| ! | ACCATGTTAAGGGGTGTACC+TGG | - | chr3_3:74884383-74884402 | None:intergenic | 50.0% |
| TGTTAGTGAGAAGGGATCGG+TGG | + | chr3_3:74884530-74884549 | Msa0472480:CDS | 50.0% | |
| TCTGTGTTTGCAGCACTCTC+CGG | - | chr3_3:74883434-74883453 | None:intergenic | 50.0% | |
| TGTTCATGGTTTCGGAGGAG+AGG | - | chr3_3:74883507-74883526 | None:intergenic | 50.0% | |
| AGGGATGTTCATGGTTTCGG+AGG | - | chr3_3:74883512-74883531 | None:intergenic | 50.0% | |
| GCTAAGGTCATCGAAGTCGA+AGG | + | chr3_3:74883556-74883575 | Msa0472480:CDS | 50.0% | |
| AGAAGCTCAAGATCGATGCC+TGG | + | chr3_3:74883656-74883675 | Msa0472480:CDS | 50.0% | |
| CTCAAGATCGATGCCTGGTT+CGG | + | chr3_3:74883661-74883680 | Msa0472480:CDS | 50.0% | |
| !! | TCTCATCACTGGTGTCACCA+AGG | + | chr3_3:74883735-74883754 | Msa0472480:CDS | 50.0% |
| !! | CTCATCACTGGTGTCACCAA+GGG | + | chr3_3:74883736-74883755 | Msa0472480:CDS | 50.0% |
| ! | CATCTTGTAGCGGAAACCCT+TGG | - | chr3_3:74883755-74883774 | None:intergenic | 50.0% |
| AGGGTTTCCGCTACAAGATG+AGG | + | chr3_3:74883755-74883774 | Msa0472480:CDS | 50.0% | |
| !! | TGGTGATGCTAGCGTTGATG+GGG | - | chr3_3:74883798-74883817 | None:intergenic | 50.0% |
| ACCAGGTACACCCCTTAACA+TGG | + | chr3_3:74884379-74884398 | Msa0472480:intron | 50.0% | |
| ! | ACCATGTTAAGGGGTGTACC+TGG | - | chr3_3:74884383-74884402 | None:intergenic | 50.0% |
| TGTTAGTGAGAAGGGATCGG+TGG | + | chr3_3:74884530-74884549 | Msa0472480:CDS | 50.0% | |
| CATGGTTTCGGAGGAGAGGA+TGG | - | chr3_3:74883503-74883522 | None:intergenic | 55.0% | |
| AACGCCGTCAGGGATGTTCA+TGG | - | chr3_3:74883521-74883540 | None:intergenic | 55.0% | |
| CCTTGATGCTAACGCCGTCA+GGG | - | chr3_3:74883531-74883550 | None:intergenic | 55.0% | |
| ACCTTGATGCTAACGCCGTC+AGG | - | chr3_3:74883532-74883551 | None:intergenic | 55.0% | |
| ATCGAAGTCGAAGGACCTCG+CGG | + | chr3_3:74883565-74883584 | Msa0472480:CDS | 55.0% | |
| ! | GGTTTTCCTGGAACCGAACC+AGG | - | chr3_3:74883677-74883696 | None:intergenic | 55.0% |
| ! | GCTGAGAGCAGTTCTGATGG+CGG | - | chr3_3:74883704-74883723 | None:intergenic | 55.0% |
| ! | GTGGCTGAGAGCAGTTCTGA+TGG | - | chr3_3:74883707-74883726 | None:intergenic | 55.0% |
| CATGGTTTCGGAGGAGAGGA+TGG | - | chr3_3:74883503-74883522 | None:intergenic | 55.0% | |
| AACGCCGTCAGGGATGTTCA+TGG | - | chr3_3:74883521-74883540 | None:intergenic | 55.0% | |
| CCTTGATGCTAACGCCGTCA+GGG | - | chr3_3:74883531-74883550 | None:intergenic | 55.0% | |
| ACCTTGATGCTAACGCCGTC+AGG | - | chr3_3:74883532-74883551 | None:intergenic | 55.0% | |
| ATCGAAGTCGAAGGACCTCG+CGG | + | chr3_3:74883565-74883584 | Msa0472480:CDS | 55.0% | |
| ! | GGTTTTCCTGGAACCGAACC+AGG | - | chr3_3:74883677-74883696 | None:intergenic | 55.0% |
| ! | GCTGAGAGCAGTTCTGATGG+CGG | - | chr3_3:74883704-74883723 | None:intergenic | 55.0% |
| ! | GTGGCTGAGAGCAGTTCTGA+TGG | - | chr3_3:74883707-74883726 | None:intergenic | 55.0% |
| CCCTGACGGCGTTAGCATCA+AGG | + | chr3_3:74883528-74883547 | Msa0472480:CDS | 60.0% | |
| TCGAAGTCGAAGGACCTCGC+GGG | + | chr3_3:74883566-74883585 | Msa0472480:CDS | 60.0% | |
| TCACGAACAAGCTTCCCGCG+AGG | - | chr3_3:74883583-74883602 | None:intergenic | 60.0% | |
| !! | TCGATGCCTGGTTCGGTTCC+AGG | + | chr3_3:74883668-74883687 | Msa0472480:CDS | 60.0% |
| !! | GAGAGCAGTTCTGATGGCGG+CGG | - | chr3_3:74883701-74883720 | None:intergenic | 60.0% |
| CCCTGACGGCGTTAGCATCA+AGG | + | chr3_3:74883528-74883547 | Msa0472480:CDS | 60.0% | |
| TCGAAGTCGAAGGACCTCGC+GGG | + | chr3_3:74883566-74883585 | Msa0472480:CDS | 60.0% | |
| TCACGAACAAGCTTCCCGCG+AGG | - | chr3_3:74883583-74883602 | None:intergenic | 60.0% | |
| !! | TCGATGCCTGGTTCGGTTCC+AGG | + | chr3_3:74883668-74883687 | Msa0472480:CDS | 60.0% |
| !! | GAGAGCAGTTCTGATGGCGG+CGG | - | chr3_3:74883701-74883720 | None:intergenic | 60.0% |
| !! | GATGGCGGCGGAGGTTTTCC+TGG | - | chr3_3:74883689-74883708 | None:intergenic | 65.0% |
| !! | AGCAGTTCTGATGGCGGCGG+AGG | - | chr3_3:74883698-74883717 | None:intergenic | 65.0% |
| !! | GATGGCGGCGGAGGTTTTCC+TGG | - | chr3_3:74883689-74883708 | None:intergenic | 65.0% |
| !! | AGCAGTTCTGATGGCGGCGG+AGG | - | chr3_3:74883698-74883717 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 74883431 | 74885117 | 74883431 | ID=Msa0472480;Name=Msa0472480 |
| chr3_3 | mRNA | 74883431 | 74885117 | 74883431 | ID=Msa0472480-mRNA-1;Parent=Msa0472480;Name=Msa0472480-mRNA-1;_AED=0.06;_eAED=0.06;_QI=62|1|1|1|1|1|3|551|193 |
| chr3_3 | exon | 74883431 | 74883864 | 74883431 | ID=Msa0472480-mRNA-1:exon:19246;Parent=Msa0472480-mRNA-1 |
| chr3_3 | exon | 74884261 | 74884383 | 74884261 | ID=Msa0472480-mRNA-1:exon:19247;Parent=Msa0472480-mRNA-1 |
| chr3_3 | exon | 74884480 | 74885117 | 74884480 | ID=Msa0472480-mRNA-1:exon:19248;Parent=Msa0472480-mRNA-1 |
| chr3_3 | five_prime_UTR | 74883431 | 74883492 | 74883431 | ID=Msa0472480-mRNA-1:five_prime_utr;Parent=Msa0472480-mRNA-1 |
| chr3_3 | CDS | 74883493 | 74883864 | 74883493 | ID=Msa0472480-mRNA-1:cds;Parent=Msa0472480-mRNA-1 |
| chr3_3 | CDS | 74884261 | 74884383 | 74884261 | ID=Msa0472480-mRNA-1:cds;Parent=Msa0472480-mRNA-1 |
| chr3_3 | CDS | 74884480 | 74884566 | 74884480 | ID=Msa0472480-mRNA-1:cds;Parent=Msa0472480-mRNA-1 |
| chr3_3 | three_prime_UTR | 74884567 | 74885117 | 74884567 | ID=Msa0472480-mRNA-1:three_prime_utr;Parent=Msa0472480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
