Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426250 | XP_003602417.1 | 99.482 | 193 | 1 | 0 | 1 | 193 | 1 | 193 | 6.32e-135 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426250 | sp|P30707|RL9_PEA | 96.891 | 193 | 6 | 0 | 1 | 193 | 1 | 193 | 1.55e-134 | 377 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426250 | G7J9M6 | 99.482 | 193 | 1 | 0 | 1 | 193 | 1 | 193 | 3.02e-135 | 385 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0426250 | 0.854584 | 1.116516e-61 | -8.615850e-47 |
| Msa0003330 | Msa0426250 | 0.823895 | 1.082546e-53 | -8.615850e-47 |
| Msa0003360 | Msa0426250 | 0.803549 | 3.306644e-49 | -8.615850e-47 |
| Msa0016350 | Msa0426250 | 0.808288 | 3.333425e-50 | -8.615850e-47 |
| Msa0021290 | Msa0426250 | 0.821694 | 3.524126e-53 | -8.615850e-47 |
| Msa0021320 | Msa0426250 | 0.829043 | 6.420177e-55 | -8.615850e-47 |
| Msa0027590 | Msa0426250 | 0.868018 | 8.917833e-66 | -8.615850e-47 |
| Msa0037480 | Msa0426250 | 0.806104 | 9.672214e-50 | -8.615850e-47 |
| Msa0040220 | Msa0426250 | 0.915902 | 3.385451e-85 | -8.615850e-47 |
| Msa0050860 | Msa0426250 | 0.813258 | 2.803853e-51 | -8.615850e-47 |
| Msa0068970 | Msa0426250 | 0.810740 | 9.918776e-51 | -8.615850e-47 |
| Msa0070840 | Msa0426250 | 0.827001 | 1.990751e-54 | -8.615850e-47 |
| Msa0072570 | Msa0426250 | 0.842568 | 2.388599e-58 | -8.615850e-47 |
| Msa0075350 | Msa0426250 | 0.824240 | 8.983551e-54 | -8.615850e-47 |
| Msa0079590 | Msa0426250 | 0.820277 | 7.468594e-53 | -8.615850e-47 |
| Msa0086160 | Msa0426250 | 0.812812 | 3.511712e-51 | -8.615850e-47 |
| Msa0087910 | Msa0426250 | 0.921351 | 4.001169e-88 | -8.615850e-47 |
| Msa0114570 | Msa0426250 | 0.830045 | 3.662834e-55 | -8.615850e-47 |
| Msa0114600 | Msa0426250 | 0.867709 | 1.120383e-65 | -8.615850e-47 |
| Msa0116600 | Msa0426250 | 0.813172 | 2.927892e-51 | -8.615850e-47 |
| Msa0116690 | Msa0426250 | 0.814405 | 1.566387e-51 | -8.615850e-47 |
| Msa0128330 | Msa0426250 | 0.912279 | 2.336783e-83 | -8.615850e-47 |
| Msa0128750 | Msa0426250 | 0.811978 | 5.341239e-51 | -8.615850e-47 |
| Msa0129130 | Msa0426250 | 0.805812 | 1.114218e-49 | -8.615850e-47 |
| Msa0132460 | Msa0426250 | 0.895913 | 6.094345e-76 | -8.615850e-47 |
| Msa0134580 | Msa0426250 | 0.917232 | 6.818770e-86 | -8.615850e-47 |
| Msa0146580 | Msa0426250 | 0.816338 | 5.821100e-52 | -8.615850e-47 |
| Msa0167860 | Msa0426250 | 0.898301 | 6.064990e-77 | -8.615850e-47 |
| Msa0168320 | Msa0426250 | 0.816351 | 5.783457e-52 | -8.615850e-47 |
| Msa0172930 | Msa0426250 | 0.803855 | 2.856706e-49 | -8.615850e-47 |
| Msa0174580 | Msa0426250 | 0.905086 | 6.220902e-80 | -8.615850e-47 |
| Msa0182050 | Msa0426250 | 0.896591 | 3.184722e-76 | -8.615850e-47 |
| Msa0182100 | Msa0426250 | 0.865214 | 6.944826e-65 | -8.615850e-47 |
| Msa0184650 | Msa0426250 | 0.804648 | 1.952791e-49 | -8.615850e-47 |
| Msa0186740 | Msa0426250 | 0.828201 | 1.025329e-54 | -8.615850e-47 |
| Msa0187810 | Msa0426250 | 0.831832 | 1.334593e-55 | -8.615850e-47 |
| Msa0188740 | Msa0426250 | 0.854620 | 1.090572e-61 | -8.615850e-47 |
| Msa0191450 | Msa0426250 | 0.887602 | 1.235046e-72 | -8.615850e-47 |
| Msa0191550 | Msa0426250 | 0.901301 | 3.075945e-78 | -8.615850e-47 |
| Msa0192300 | Msa0426250 | 0.858853 | 6.194752e-63 | -8.615850e-47 |
| Msa0192750 | Msa0426250 | 0.807793 | 4.249182e-50 | -8.615850e-47 |
| Msa0194940 | Msa0426250 | 0.934855 | 2.114224e-96 | -8.615850e-47 |
| Msa0195030 | Msa0426250 | 0.803799 | 2.933431e-49 | -8.615850e-47 |
| Msa0210330 | Msa0426250 | 0.818434 | 1.964442e-52 | -8.615850e-47 |
| Msa0210360 | Msa0426250 | 0.842761 | 2.123069e-58 | -8.615850e-47 |
| Msa0222730 | Msa0426250 | 0.852899 | 3.409310e-61 | -8.615850e-47 |
| Msa0233550 | Msa0426250 | 0.802544 | 5.335859e-49 | -8.615850e-47 |
| Msa0234850 | Msa0426250 | 0.811969 | 5.364916e-51 | -8.615850e-47 |
| Msa0234900 | Msa0426250 | 0.808297 | 3.319445e-50 | -8.615850e-47 |
| Msa0235050 | Msa0426250 | 0.853533 | 2.244536e-61 | -8.615850e-47 |
| Msa0237180 | Msa0426250 | 0.801784 | 7.646200e-49 | -8.615850e-47 |
| Msa0369410 | Msa0426250 | 0.882376 | 1.097719e-70 | -8.615850e-47 |
| Msa0371490 | Msa0426250 | 0.847371 | 1.206117e-59 | -8.615850e-47 |
| Msa0377370 | Msa0426250 | 0.826561 | 2.535052e-54 | -8.615850e-47 |
| Msa0377520 | Msa0426250 | 0.844976 | 5.414725e-59 | -8.615850e-47 |
| Msa0382960 | Msa0426250 | 0.817389 | 3.382758e-52 | -8.615850e-47 |
| Msa0419710 | Msa0426250 | 0.867700 | 1.127702e-65 | -8.615850e-47 |
| Msa0426090 | Msa0426250 | 0.979962 | 3.913888e-149 | -8.615850e-47 |
| Msa0426250 | Msa0432750 | 0.831704 | 1.435616e-55 | -8.615850e-47 |
| Msa0426250 | Msa0438960 | 0.826935 | 2.064975e-54 | -8.615850e-47 |
| Msa0426250 | Msa0450150 | 0.870386 | 1.518244e-66 | -8.615850e-47 |
| Msa0426250 | Msa0463520 | 0.837591 | 4.750398e-57 | -8.615850e-47 |
| Msa0426250 | Msa0471880 | 0.804118 | 2.518499e-49 | -8.615850e-47 |
| Msa0426250 | Msa0472480 | 0.968365 | 1.422032e-128 | -8.615850e-47 |
| Msa0426250 | Msa0475810 | 0.900081 | 1.046359e-77 | -8.615850e-47 |
| Msa0426250 | Msa0479980 | 0.827340 | 1.651605e-54 | -8.615850e-47 |
| Msa0426250 | Msa0481520 | 0.886552 | 3.097297e-72 | -8.615850e-47 |
| Msa0426250 | Msa0482560 | 0.859390 | 4.274347e-63 | -8.615850e-47 |
| Msa0426250 | Msa0511760 | 0.802784 | 4.759627e-49 | -8.615850e-47 |
| Msa0426250 | Msa0517480 | 0.857253 | 1.851059e-62 | -8.615850e-47 |
| Msa0426250 | Msa0529900 | 0.878146 | 3.554692e-69 | -8.615850e-47 |
| Msa0426250 | Msa0540480 | 0.807513 | 4.871769e-50 | -8.615850e-47 |
| Msa0426250 | Msa0547920 | 0.903050 | 5.177782e-79 | -8.615850e-47 |
| Msa0426250 | Msa0550420 | 0.837397 | 5.326499e-57 | -8.615850e-47 |
| Msa0426250 | Msa0552510 | 0.807084 | 6.007714e-50 | -8.615850e-47 |
| Msa0426250 | Msa0573550 | 0.916216 | 2.325771e-85 | -8.615850e-47 |
| Msa0426250 | Msa0574780 | 0.847094 | 1.436805e-59 | -8.615850e-47 |
| Msa0426250 | Msa0578010 | 0.815122 | 1.086847e-51 | -8.615850e-47 |
| Msa0426250 | Msa0579830 | 0.856207 | 3.761511e-62 | -8.615850e-47 |
| Msa0426250 | Msa0582070 | 0.836062 | 1.166406e-56 | -8.615850e-47 |
| Msa0426250 | Msa0585570 | 0.806550 | 7.790555e-50 | -8.615850e-47 |
| Msa0426250 | Msa0597240 | 0.882347 | 1.124689e-70 | -8.615850e-47 |
| Msa0426250 | Msa0602900 | 0.890379 | 1.038797e-73 | -8.615850e-47 |
| Msa0426250 | Msa0605890 | 0.892861 | 1.074403e-74 | -8.615850e-47 |
| Msa0426250 | Msa0619230 | 0.896241 | 4.456130e-76 | -8.615850e-47 |
| Msa0426250 | Msa0622230 | 0.830063 | 3.626738e-55 | -8.615850e-47 |
| Msa0426250 | Msa0629280 | 0.806406 | 8.356325e-50 | -8.615850e-47 |
| Msa0426250 | Msa0643960 | 0.891862 | 2.695882e-74 | -8.615850e-47 |
| Msa0426250 | Msa0648620 | 0.815599 | 8.511761e-52 | -8.615850e-47 |
| Msa0426250 | Msa0648670 | 0.818894 | 1.544681e-52 | -8.615850e-47 |
| Msa0426250 | Msa0649890 | 0.843950 | 1.022495e-58 | -8.615850e-47 |
| Msa0426250 | Msa0653060 | 0.891703 | 3.117609e-74 | -8.615850e-47 |
| Msa0426250 | Msa0656450 | 0.800657 | 1.300467e-48 | -8.615850e-47 |
| Msa0426250 | Msa0663400 | 0.814590 | 1.425605e-51 | -8.615850e-47 |
| Msa0426250 | Msa0681220 | 0.810414 | 1.166303e-50 | -8.615850e-47 |
| Msa0426250 | Msa0686550 | 0.861882 | 7.507941e-64 | -8.615850e-47 |
| Msa0426250 | Msa0694400 | 0.911930 | 3.479038e-83 | -8.615850e-47 |
| Msa0426250 | Msa0704860 | 0.891025 | 5.784108e-74 | -8.615850e-47 |
| Msa0426250 | Msa0705800 | 0.817391 | 3.378343e-52 | -8.615850e-47 |
| Msa0426250 | Msa0708630 | 0.895616 | 8.090087e-76 | -8.615850e-47 |
| Msa0426250 | Msa0717380 | 0.806050 | 9.929382e-50 | -8.615850e-47 |
| Msa0426250 | Msa0718560 | 0.835582 | 1.543322e-56 | -8.615850e-47 |
| Msa0426250 | Msa0741510 | 0.836099 | 1.140926e-56 | -8.615850e-47 |
| Msa0426250 | Msa0748350 | 0.840958 | 6.352825e-58 | -8.615850e-47 |
| Msa0426250 | Msa0749000 | 0.845640 | 3.580823e-59 | -8.615850e-47 |
| Msa0426250 | Msa0758420 | 0.820016 | 8.569281e-53 | -8.615850e-47 |
| Msa0426250 | Msa0788380 | 0.877316 | 6.927874e-69 | -8.615850e-47 |
| Msa0426250 | Msa0790450 | 0.903014 | 5.369074e-79 | -8.615850e-47 |
| Msa0426250 | Msa0796490 | 0.851640 | 7.781448e-61 | -8.615850e-47 |
| Msa0426250 | Msa0799830 | 0.833417 | 5.398719e-56 | -8.615850e-47 |
| Msa0426250 | Msa0834220 | 0.802231 | 6.187926e-49 | -8.615850e-47 |
| Msa0426250 | Msa0835190 | 0.826521 | 2.591772e-54 | -8.615850e-47 |
| Msa0426250 | Msa0838070 | 0.851049 | 1.142891e-60 | -8.615850e-47 |
| Msa0426250 | Msa0848240 | 0.800838 | 1.194231e-48 | -8.615850e-47 |
| Msa0426250 | Msa0861320 | 0.821585 | 3.733264e-53 | -8.615850e-47 |
| Msa0426250 | Msa0902220 | 0.822493 | 2.299623e-53 | -8.615850e-47 |
| Msa0426250 | Msa0902730 | 0.828073 | 1.101060e-54 | -8.615850e-47 |
| Msa0426250 | Msa0927910 | 0.826876 | 2.132178e-54 | -8.615850e-47 |
| Msa0426250 | Msa0929680 | 0.813033 | 3.141710e-51 | -8.615850e-47 |
| Msa0426250 | Msa0929700 | 0.908105 | 2.458310e-81 | -8.615850e-47 |
| Msa0426250 | Msa0930100 | 0.856060 | 4.151013e-62 | -8.615850e-47 |
| Msa0426250 | Msa0930790 | 0.823505 | 1.336208e-53 | -8.615850e-47 |
| Msa0426250 | Msa0930890 | 0.855500 | 6.051666e-62 | -8.615850e-47 |
| Msa0426250 | Msa0978470 | 0.818068 | 2.377446e-52 | -8.615850e-47 |
| Msa0426250 | Msa1004780 | 0.815298 | 9.931011e-52 | -8.615850e-47 |
| Msa0426250 | Msa1019110 | 0.840887 | 6.634438e-58 | -8.615850e-47 |
| Msa0426250 | Msa1025200 | 0.838870 | 2.223554e-57 | -8.615850e-47 |
| Msa0426250 | Msa1025220 | 0.820984 | 5.137836e-53 | -8.615850e-47 |
| Msa0426250 | Msa1037290 | 0.857001 | 2.196635e-62 | -8.615850e-47 |
| Msa0426250 | Msa1040160 | 0.912065 | 2.983866e-83 | -8.615850e-47 |
| Msa0426250 | Msa1041680 | 0.872702 | 2.596587e-67 | -8.615850e-47 |
| Msa0426250 | Msa1042100 | 0.812367 | 4.392847e-51 | -8.615850e-47 |
| Msa0426250 | Msa1047020 | 0.823342 | 1.458322e-53 | -8.615850e-47 |
| Msa0426250 | Msa1050100 | 0.859787 | 3.247723e-63 | -8.615850e-47 |
| Msa0426250 | Msa1054280 | 0.856146 | 3.918095e-62 | -8.615850e-47 |
| Msa0426250 | Msa1068660 | 0.801759 | 7.737776e-49 | -8.615850e-47 |
| Msa0426250 | Msa1078870 | 0.837404 | 5.302813e-57 | -8.615850e-47 |
| Msa0426250 | Msa1078980 | 0.859528 | 3.887092e-63 | -8.615850e-47 |
| Msa0426250 | Msa1079910 | 0.859270 | 4.646858e-63 | -8.615850e-47 |
| Msa0426250 | Msa1079920 | 0.841211 | 5.450873e-58 | -8.615850e-47 |
| Msa0426250 | Msa1082050 | 0.810220 | 1.284506e-50 | -8.615850e-47 |
| Msa0426250 | Msa1082170 | 0.825388 | 4.817968e-54 | -8.615850e-47 |
| Msa0426250 | Msa1083370 | 0.907479 | 4.847659e-81 | -8.615850e-47 |
| Msa0426250 | Msa1085850 | 0.812201 | 4.775694e-51 | -8.615850e-47 |
| Msa0426250 | Msa1091290 | 0.805770 | 1.136846e-49 | -8.615850e-47 |
| Msa0426250 | Msa1093500 | 0.833567 | 4.953311e-56 | -8.615850e-47 |
| Msa0426250 | Msa1109310 | 0.819860 | 9.305165e-53 | -8.615850e-47 |
| Msa0426250 | Msa1116940 | 0.840012 | 1.123321e-57 | -8.615850e-47 |
| Msa0426250 | Msa1124850 | 0.868629 | 5.666668e-66 | -8.615850e-47 |
| Msa0426250 | Msa1126520 | 0.815224 | 1.031592e-51 | -8.615850e-47 |
| Msa0426250 | Msa1126690 | 0.874694 | 5.527518e-68 | -8.615850e-47 |
| Msa0426250 | Msa1128120 | 0.834817 | 2.406526e-56 | -8.615850e-47 |
| Msa0426250 | Msa1136880 | 0.814066 | 1.861163e-51 | -8.615850e-47 |
| Msa0426250 | Msa1147670 | 0.803114 | 4.067996e-49 | -8.615850e-47 |
| Msa0426250 | Msa1156830 | 0.825535 | 4.445999e-54 | -8.615850e-47 |
| Msa0426250 | Msa1164150 | 0.867870 | 9.945331e-66 | -8.615850e-47 |
| Msa0426250 | Msa1165640 | 0.829771 | 4.272928e-55 | -8.615850e-47 |
| Msa0426250 | Msa1166570 | 0.874071 | 8.994634e-68 | -8.615850e-47 |
| Msa0426250 | Msa1166670 | 0.802466 | 5.537329e-49 | -8.615850e-47 |
| Msa0426250 | Msa1167540 | 0.852506 | 4.414115e-61 | -8.615850e-47 |
| Msa0426250 | Msa1167550 | 0.827127 | 1.857312e-54 | -8.615850e-47 |
| Msa0426250 | Msa1169180 | 0.863558 | 2.284983e-64 | -8.615850e-47 |
| Msa0426250 | Msa1180000 | 0.872386 | 3.311018e-67 | -8.615850e-47 |
| Msa0426250 | Msa1186030 | 0.862271 | 5.704111e-64 | -8.615850e-47 |
| Msa0426250 | Msa1203560 | 0.833108 | 6.445179e-56 | -8.615850e-47 |
| Msa0426250 | Msa1208330 | 0.835234 | 1.889319e-56 | -8.615850e-47 |
| Msa0426250 | Msa1219760 | 0.819071 | 1.407544e-52 | -8.615850e-47 |
| Msa0426250 | Msa1227080 | 0.838530 | 2.722622e-57 | -8.615850e-47 |
| Msa0426250 | Msa1235950 | 0.834952 | 2.225627e-56 | -8.615850e-47 |
| Msa0426250 | Msa1235980 | 0.841480 | 4.633057e-58 | -8.615850e-47 |
| Msa0426250 | Msa1237040 | 0.905107 | 6.088541e-80 | -8.615850e-47 |
| Msa0426250 | Msa1240270 | 0.842374 | 2.688978e-58 | -8.615850e-47 |
| Msa0426250 | Msa1255830 | 0.845451 | 4.027315e-59 | -8.615850e-47 |
| Msa0426250 | Msa1255850 | 0.854369 | 1.288474e-61 | -8.615850e-47 |
| Msa0426250 | Msa1258540 | 0.866208 | 3.373011e-65 | -8.615850e-47 |
| Msa0426250 | Msa1270640 | 0.861573 | 9.329937e-64 | -8.615850e-47 |
| Msa0426250 | Msa1270710 | 0.858169 | 9.908249e-63 | -8.615850e-47 |
| Msa0426250 | Msa1278130 | 0.879609 | 1.084081e-69 | -8.615850e-47 |
| Msa0426250 | Msa1284060 | 0.847137 | 1.398495e-59 | -8.615850e-47 |
| Msa0426250 | Msa1295150 | 0.809330 | 1.996306e-50 | -8.615850e-47 |
| Msa0426250 | Msa1296090 | 0.824843 | 6.478845e-54 | -8.615850e-47 |
| Msa0426250 | Msa1311400 | 0.872231 | 3.728953e-67 | -8.615850e-47 |
| Msa0426250 | Msa1316100 | 0.800229 | 1.589770e-48 | -8.615850e-47 |
| Msa0426250 | Msa1317390 | 0.876732 | 1.105063e-68 | -8.615850e-47 |
| Msa0426250 | Msa1330730 | 0.820660 | 6.100700e-53 | -8.615850e-47 |
| Msa0426250 | Msa1332250 | 0.823846 | 1.111632e-53 | -8.615850e-47 |
| Msa0426250 | Msa1333370 | 0.818005 | 2.456662e-52 | -8.615850e-47 |
| Msa0426250 | Msa1341130 | 0.838388 | 2.962352e-57 | -8.615850e-47 |
| Msa0426250 | Msa1341780 | 0.894733 | 1.867257e-75 | -8.615850e-47 |
| Msa0426250 | Msa1351020 | 0.893713 | 4.863341e-75 | -8.615850e-47 |
| Msa0426250 | Msa1351910 | 0.870733 | 1.167304e-66 | -8.615850e-47 |
| Msa0426250 | Msa1353300 | 0.810039 | 1.405467e-50 | -8.615850e-47 |
| Msa0426250 | Msa1358710 | 0.816283 | 5.989629e-52 | -8.615850e-47 |
| Msa0426250 | Msa1363910 | 0.830716 | 2.510285e-55 | -8.615850e-47 |
| Msa0426250 | Msa1367540 | 0.853205 | 2.786577e-61 | -8.615850e-47 |
| Msa0426250 | Msa1368920 | 0.857848 | 1.234289e-62 | -8.615850e-47 |
| Msa0426250 | Msa1371410 | 0.835380 | 1.735435e-56 | -8.615850e-47 |
| Msa0426250 | Msa1385480 | 0.901878 | 1.714929e-78 | -8.615850e-47 |
| Msa0426250 | Msa1390760 | 0.895140 | 1.271253e-75 | -8.615850e-47 |
| Msa0426250 | Msa1397660 | 0.805438 | 1.334988e-49 | -8.615850e-47 |
| Msa0426250 | Msa1403520 | 0.809230 | 2.096822e-50 | -8.615850e-47 |
| Msa0426250 | Msa1407550 | 0.822084 | 2.861936e-53 | -8.615850e-47 |
| Msa0426250 | Msa1410570 | 0.814775 | 1.297170e-51 | -8.615850e-47 |
| Msa0426250 | Msa1413570 | 0.807425 | 5.086164e-50 | -8.615850e-47 |
| Msa0426250 | Msa1415620 | 0.836834 | 7.419351e-57 | -8.615850e-47 |
| Msa0426250 | Msa1424570 | 0.876219 | 1.661174e-68 | -8.615850e-47 |
| Msa0426250 | Msa1425070 | 0.806105 | 9.666313e-50 | -8.615850e-47 |
| Msa0426250 | Msa1426120 | 0.838958 | 2.110060e-57 | -8.615850e-47 |
| Msa0426250 | Msa1432310 | 0.867025 | 1.854102e-65 | -8.615850e-47 |
| Msa0426250 | Msa1446410 | 0.871056 | 9.141188e-67 | -8.615850e-47 |
| Msa0426250 | Msa1449160 | 0.840193 | 1.007899e-57 | -8.615850e-47 |
| Msa0426250 | Msa1450560 | 0.907376 | 5.419822e-81 | -8.615850e-47 |
| Msa0426250 | Msa1453530 | 0.802447 | 5.587190e-49 | -8.615850e-47 |
| Msa0426250 | Msa1463570 | 0.908296 | 1.995378e-81 | -8.615850e-47 |
| Msa0426250 | Msa1465700 | 0.837501 | 5.007918e-57 | -8.615850e-47 |
| Msa0239420 | Msa0426250 | 0.804755 | 1.854844e-49 | -8.615850e-47 |
| Msa0264640 | Msa0426250 | 0.818231 | 2.183105e-52 | -8.615850e-47 |
| Msa0270160 | Msa0426250 | 0.872954 | 2.138406e-67 | -8.615850e-47 |
| Msa0277600 | Msa0426250 | 0.896659 | 2.983137e-76 | -8.615850e-47 |
| Msa0281330 | Msa0426250 | 0.852923 | 3.356020e-61 | -8.615850e-47 |
| Msa0281370 | Msa0426250 | 0.863436 | 2.493251e-64 | -8.615850e-47 |
| Msa0297830 | Msa0426250 | 0.808031 | 3.781587e-50 | -8.615850e-47 |
| Msa0301220 | Msa0426250 | 0.869111 | 3.954697e-66 | -8.615850e-47 |
| Msa0301250 | Msa0426250 | 0.858086 | 1.048857e-62 | -8.615850e-47 |
| Msa0312210 | Msa0426250 | 0.850934 | 1.231156e-60 | -8.615850e-47 |
| Msa0313060 | Msa0426250 | 0.880683 | 4.485874e-70 | -8.615850e-47 |
| Msa0313520 | Msa0426250 | 0.826627 | 2.445487e-54 | -8.615850e-47 |
| Msa0315430 | Msa0426250 | 0.909866 | 3.545404e-82 | -8.615850e-47 |
| Msa0335840 | Msa0426250 | 0.822954 | 1.796286e-53 | -8.615850e-47 |
| Msa0340560 | Msa0426250 | 0.834321 | 3.207653e-56 | -8.615850e-47 |
| Msa0342850 | Msa0426250 | 0.843606 | 1.263851e-58 | -8.615850e-47 |
| Msa0346090 | Msa0426250 | 0.801775 | 7.679498e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426250 | MtrunA17_Chr3g0128201 | 99.482 | 193 | 1 | 0 | 1 | 193 | 1 | 193 | 5.81e-139 | 385 |
| Msa0426250 | MtrunA17_Chr5g0428861 | 87.500 | 192 | 24 | 0 | 1 | 192 | 1 | 192 | 1.08e-126 | 354 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426250 | AT1G33140.1 | 87.113 | 194 | 24 | 1 | 1 | 193 | 1 | 194 | 9.78e-122 | 342 |
| Msa0426250 | AT1G33120.1 | 87.113 | 194 | 24 | 1 | 1 | 193 | 1 | 194 | 9.78e-122 | 342 |
| Msa0426250 | AT4G10450.1 | 84.536 | 194 | 29 | 1 | 1 | 193 | 1 | 194 | 2.63e-120 | 338 |
| Msa0426250 | AT4G10450.2 | 84.337 | 166 | 25 | 1 | 1 | 165 | 1 | 166 | 2.47e-101 | 290 |
Find 69 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATTTATTCCAACCATTTA+AGG | 0.140727 | 3_2:-76630829 | None:intergenic |
| ATGAGTCTGGTTATTTATTT+TGG | 0.141372 | 3_2:+76630758 | Msa0426250:three_prime_UTR |
| ATTTCATGTGTTACCTTAAA+TGG | 0.144289 | 3_2:+76630816 | Msa0426250:three_prime_UTR |
| AGCTCAGTTCGTTAAATTAT+TGG | 0.181439 | 3_2:+76630559 | Msa0426250:three_prime_UTR |
| ATTGAGATCCGAAACTTTCT+TGG | 0.238218 | 3_2:+76629614 | Msa0426250:CDS |
| TTAAGGTAACACATGAAATA+TGG | 0.266488 | 3_2:-76630812 | None:intergenic |
| TTACATTTGCTTGTTGAGTT+TGG | 0.269604 | 3_2:+76630440 | Msa0426250:three_prime_UTR |
| GGTGAAGGATGAGGTTGTTT+TGG | 0.319250 | 3_2:+76630085 | Msa0426250:CDS |
| ATGACATTGAGCTTGTTTCT+AGG | 0.326351 | 3_2:+76630114 | Msa0426250:CDS |
| ATTCAAGTTTCTGTTGGTCT+TGG | 0.332651 | 3_2:+76630380 | Msa0426250:three_prime_UTR |
| TCGATGCCTGGTTCGGTTCC+AGG | 0.334604 | 3_2:+76629450 | Msa0426250:CDS |
| GTCAGGGATGTTCATGGTTT+CGG | 0.351741 | 3_2:-76629294 | None:intergenic |
| TTCTATATGTTTGAAATGAT+AGG | 0.374982 | 3_2:+76630723 | Msa0426250:three_prime_UTR |
| ACCTTGATGCTAACGCCGTC+AGG | 0.384134 | 3_2:-76629311 | None:intergenic |
| CTTCTTCTTGCCTTCTTCAT+CGG | 0.396628 | 3_2:-76629420 | None:intergenic |
| CTCAATCGACTTGTTGTCAT+TGG | 0.397158 | 3_2:-76629597 | None:intergenic |
| GGTATTTATGTTAGTGAGAA+GGG | 0.433044 | 3_2:+76630296 | Msa0426250:CDS |
| AGTTTCTGTTGGTCTTGGAT+TGG | 0.433152 | 3_2:+76630385 | Msa0426250:three_prime_UTR |
| ATTGGTGATGCTAGCGTTGA+TGG | 0.438976 | 3_2:-76629579 | None:intergenic |
| ATGTTAAGAAGAAGGATATC+AGG | 0.444332 | 3_2:+76630261 | Msa0426250:CDS |
| CTCAAGATCGATGCCTGGTT+CGG | 0.447724 | 3_2:+76629443 | Msa0426250:CDS |
| GATATCAGGAAGTTTCTTGA+TGG | 0.450730 | 3_2:+76630275 | Msa0426250:CDS |
| AGGAAAGTAGATTTGCTTGA+TGG | 0.454716 | 3_2:+76630038 | Msa0426250:CDS |
| AGTTTAATTCAAGTTTCTGT+TGG | 0.456312 | 3_2:+76630374 | Msa0426250:three_prime_UTR |
| AAACTTTCTTGGAGAAAAGA+AGG | 0.457024 | 3_2:+76629625 | Msa0426250:CDS |
| AGCAGTTCTGATGGCGGCGG+AGG | 0.457127 | 3_2:-76629477 | None:intergenic |
| TCTGTGTTTGCAGCACTCTC+CGG | 0.465365 | 3_2:-76629213 | None:intergenic |
| TGGTTAAATAATGCACTGAA+TGG | 0.480150 | 3_2:+76630634 | Msa0426250:three_prime_UTR |
| GGTGGTAACTGAAGAATAGA+TGG | 0.489244 | 3_2:+76630322 | Msa0426250:exon |
| AACGCCGTCAGGGATGTTCA+TGG | 0.489928 | 3_2:-76629300 | None:intergenic |
| GAAAGCTCAGAGTATGAGTC+TGG | 0.491000 | 3_2:+76630745 | Msa0426250:three_prime_UTR |
| CATGTGTTACCTTAAATGGT+TGG | 0.492837 | 3_2:+76630820 | Msa0426250:three_prime_UTR |
| GATCTCATCACCGATGAAGA+AGG | 0.495068 | 3_2:+76629410 | Msa0426250:CDS |
| GAAATGCCATGTTAAGAAGA+AGG | 0.499506 | 3_2:+76630253 | Msa0426250:intron |
| CCCTGACGGCGTTAGCATCA+AGG | 0.507605 | 3_2:+76629310 | Msa0426250:CDS |
| TTCAATTGTTCGATCTGAGA+AGG | 0.526562 | 3_2:+76630064 | Msa0426250:CDS |
| TGGAAATCTCACACACTCTA+CGG | 0.531126 | 3_2:-76629240 | None:intergenic |
| TGGTATTTATGTTAGTGAGA+AGG | 0.531892 | 3_2:+76630295 | Msa0426250:CDS |
| TGATATCCTTCTTCTTAACA+TGG | 0.532081 | 3_2:-76630259 | None:intergenic |
| CATGGTTTCGGAGGAGAGGA+TGG | 0.534778 | 3_2:-76629282 | None:intergenic |
| TTGGTGATGCTAGCGTTGAT+GGG | 0.543746 | 3_2:-76629578 | None:intergenic |
| TTATGTTAGTGAGAAGGGAT+CGG | 0.552761 | 3_2:+76630301 | Msa0426250:CDS |
| CACGTTGAGAATCTCATCAC+TGG | 0.554104 | 3_2:+76629506 | Msa0426250:CDS |
| CATCTTGTAGCGGAAACCCT+TGG | 0.556289 | 3_2:-76629534 | None:intergenic |
| AGGGTTTCCGCTACAAGATG+AGG | 0.564650 | 3_2:+76629537 | Msa0426250:CDS |
| ATCTGAGAAGGTGAAGGATG+AGG | 0.567425 | 3_2:+76630076 | Msa0426250:CDS |
| GAGAGCAGTTCTGATGGCGG+CGG | 0.574544 | 3_2:-76629480 | None:intergenic |
| CTCATCACTGGTGTCACCAA+GGG | 0.576975 | 3_2:+76629518 | Msa0426250:CDS |
| GTGGCTGAGAGCAGTTCTGA+TGG | 0.581831 | 3_2:-76629486 | None:intergenic |
| TGTTCATGGTTTCGGAGGAG+AGG | 0.584113 | 3_2:-76629286 | None:intergenic |
| TAGCATCAAGGTTAACGCTA+AGG | 0.586158 | 3_2:+76629322 | Msa0426250:CDS |
| AGAAGCTCAAGATCGATGCC+TGG | 0.588777 | 3_2:+76629438 | Msa0426250:CDS |
| CCTTGATGCTAACGCCGTCA+GGG | 0.590861 | 3_2:-76629310 | None:intergenic |
| TTTACAAATAAAATTGACCA+CGG | 0.594223 | 3_2:-76630788 | None:intergenic |
| TCGAAGTCGAAGGACCTCGC+GGG | 0.613305 | 3_2:+76629348 | Msa0426250:CDS |
| AGGGATGTTCATGGTTTCGG+AGG | 0.621327 | 3_2:-76629291 | None:intergenic |
| TCTCATCACTGGTGTCACCA+AGG | 0.623987 | 3_2:+76629517 | Msa0426250:CDS |
| GTCATGTGCACTTATTAACC+AGG | 0.625933 | 3_2:+76630136 | Msa0426250:CDS |
| TGTTCGATCTGAGAAGGTGA+AGG | 0.628133 | 3_2:+76630070 | Msa0426250:CDS |
| GCTAAGGTCATCGAAGTCGA+AGG | 0.640211 | 3_2:+76629338 | Msa0426250:CDS |
| TGTTAGTGAGAAGGGATCGG+TGG | 0.651106 | 3_2:+76630304 | Msa0426250:CDS |
| ATCGAAGTCGAAGGACCTCG+CGG | 0.660265 | 3_2:+76629347 | Msa0426250:CDS |
| TGGTGATGCTAGCGTTGATG+GGG | 0.676063 | 3_2:-76629577 | None:intergenic |
| GCTGAGAGCAGTTCTGATGG+CGG | 0.677632 | 3_2:-76629483 | None:intergenic |
| CGGTGATGAGATCAAAATCG+AGG | 0.680504 | 3_2:-76629400 | None:intergenic |
| ACACAAACCTCATCTTGTAG+CGG | 0.691692 | 3_2:-76629544 | None:intergenic |
| GAAACCATGAACATCCCTGA+CGG | 0.701649 | 3_2:+76629296 | Msa0426250:CDS |
| CAGTGATGAGATTCTCAACG+TGG | 0.725921 | 3_2:-76629505 | None:intergenic |
| TCACGAACAAGCTTCCCGCG+AGG | 0.748381 | 3_2:-76629362 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATTAGATTAAAACTA+GGG | - | chr3_2:76629763-76629782 | None:intergenic | 10.0% |
| !! | TTATAAATTAGATTAAAACT+AGG | - | chr3_2:76629764-76629783 | None:intergenic | 10.0% |
| !!! | ATGAGTTAATTTTTTTATTT+TGG | + | chr3_2:76629906-76629925 | Msa0426250:intron | 10.0% |
| !! | TATAAATTAGATTAAAACTA+GGG | - | chr3_2:76629763-76629782 | None:intergenic | 10.0% |
| !! | TTATAAATTAGATTAAAACT+AGG | - | chr3_2:76629764-76629783 | None:intergenic | 10.0% |
| !!! | ATGAGTTAATTTTTTTATTT+TGG | + | chr3_2:76629906-76629925 | Msa0426250:intron | 10.0% |
| !!! | TCTTTAATTTCTTCAATTTT+AGG | + | chr3_2:76629680-76629699 | Msa0426250:intron | 15.0% |
| !!! | TATTGTTCTTATATGTTTTA+AGG | + | chr3_2:76630508-76630527 | Msa0426250:three_prime_UTR | 15.0% |
| !!! | TCTTTAATTTCTTCAATTTT+AGG | + | chr3_2:76629680-76629699 | Msa0426250:intron | 15.0% |
| !!! | TATTGTTCTTATATGTTTTA+AGG | + | chr3_2:76630508-76630527 | Msa0426250:three_prime_UTR | 15.0% |
| !! | GAGATAATGTCTAATTTATT+TGG | + | chr3_2:76629940-76629959 | Msa0426250:intron | 20.0% |
| !!! | TTTGGAATTTTTGGTTATTT+TGG | + | chr3_2:76630458-76630477 | Msa0426250:three_prime_UTR | 20.0% |
| !!! | TTCTATATGTTTGAAATGAT+AGG | + | chr3_2:76630723-76630742 | Msa0426250:three_prime_UTR | 20.0% |
| !! | TTTACAAATAAAATTGACCA+CGG | - | chr3_2:76630791-76630810 | None:intergenic | 20.0% |
| !! | GAGATAATGTCTAATTTATT+TGG | + | chr3_2:76629940-76629959 | Msa0426250:intron | 20.0% |
| !!! | TTTGGAATTTTTGGTTATTT+TGG | + | chr3_2:76630458-76630477 | Msa0426250:three_prime_UTR | 20.0% |
| !!! | TTCTATATGTTTGAAATGAT+AGG | + | chr3_2:76630723-76630742 | Msa0426250:three_prime_UTR | 20.0% |
| !! | TTTACAAATAAAATTGACCA+CGG | - | chr3_2:76630791-76630810 | None:intergenic | 20.0% |
| ! | CACAAATTAAAGTGAAACTA+AGG | - | chr3_2:76629714-76629733 | None:intergenic | 25.0% |
| ! | GTCTAATTTATTTGGTTATC+TGG | + | chr3_2:76629948-76629967 | Msa0426250:intron | 25.0% |
| ! | GAATCGAATAATGTTGTATT+AGG | + | chr3_2:76630013-76630032 | Msa0426250:intron | 25.0% |
| ! | ACAAAAATAAAGCATGTTCA+TGG | - | chr3_2:76630180-76630199 | None:intergenic | 25.0% |
| !! | AGTTTAATTCAAGTTTCTGT+TGG | + | chr3_2:76630374-76630393 | Msa0426250:three_prime_UTR | 25.0% |
| !!! | GTTATTTTGGTTTTCTCTAT+TGG | + | chr3_2:76630471-76630490 | Msa0426250:three_prime_UTR | 25.0% |
| !! | GTTTTCATTGAATTATTCAG+TGG | + | chr3_2:76630614-76630633 | Msa0426250:three_prime_UTR | 25.0% |
| !! | ATGAGTCTGGTTATTTATTT+TGG | + | chr3_2:76630758-76630777 | Msa0426250:three_prime_UTR | 25.0% |
| ! | TTAAGGTAACACATGAAATA+TGG | - | chr3_2:76630815-76630834 | None:intergenic | 25.0% |
| ! | ATTTCATGTGTTACCTTAAA+TGG | + | chr3_2:76630816-76630835 | Msa0426250:three_prime_UTR | 25.0% |
| ! | AGATTTATTCCAACCATTTA+AGG | - | chr3_2:76630832-76630851 | None:intergenic | 25.0% |
| ! | CACAAATTAAAGTGAAACTA+AGG | - | chr3_2:76629714-76629733 | None:intergenic | 25.0% |
| ! | GTCTAATTTATTTGGTTATC+TGG | + | chr3_2:76629948-76629967 | Msa0426250:intron | 25.0% |
| ! | GAATCGAATAATGTTGTATT+AGG | + | chr3_2:76630013-76630032 | Msa0426250:intron | 25.0% |
| ! | ACAAAAATAAAGCATGTTCA+TGG | - | chr3_2:76630180-76630199 | None:intergenic | 25.0% |
| !! | AGTTTAATTCAAGTTTCTGT+TGG | + | chr3_2:76630374-76630393 | Msa0426250:three_prime_UTR | 25.0% |
| !!! | GTTATTTTGGTTTTCTCTAT+TGG | + | chr3_2:76630471-76630490 | Msa0426250:three_prime_UTR | 25.0% |
| !! | GTTTTCATTGAATTATTCAG+TGG | + | chr3_2:76630614-76630633 | Msa0426250:three_prime_UTR | 25.0% |
| !! | ATGAGTCTGGTTATTTATTT+TGG | + | chr3_2:76630758-76630777 | Msa0426250:three_prime_UTR | 25.0% |
| ! | TTAAGGTAACACATGAAATA+TGG | - | chr3_2:76630815-76630834 | None:intergenic | 25.0% |
| ! | ATTTCATGTGTTACCTTAAA+TGG | + | chr3_2:76630816-76630835 | Msa0426250:three_prime_UTR | 25.0% |
| ! | AGATTTATTCCAACCATTTA+AGG | - | chr3_2:76630832-76630851 | None:intergenic | 25.0% |
| !!! | GTCTTCATTTTTTGATACTG+TGG | - | chr3_2:76629263-76629282 | None:intergenic | 30.0% |
| ! | TCTTTTCTCCAAGAAAGTTT+CGG | - | chr3_2:76629625-76629644 | None:intergenic | 30.0% |
| AAACTTTCTTGGAGAAAAGA+AGG | + | chr3_2:76629625-76629644 | Msa0426250:CDS | 30.0% | |
| ! | TTTACTAGTTTGTGAATCTG+TGG | + | chr3_2:76629986-76630005 | Msa0426250:intron | 30.0% |
| GAATAATGTTGTATTAGGTG+AGG | + | chr3_2:76630018-76630037 | Msa0426250:intron | 30.0% | |
| TGATATCCTTCTTCTTAACA+TGG | - | chr3_2:76630262-76630281 | None:intergenic | 30.0% | |
| ATGTTAAGAAGAAGGATATC+AGG | + | chr3_2:76630261-76630280 | Msa0426250:CDS | 30.0% | |
| TGGTATTTATGTTAGTGAGA+AGG | + | chr3_2:76630295-76630314 | Msa0426250:CDS | 30.0% | |
| GGTATTTATGTTAGTGAGAA+GGG | + | chr3_2:76630296-76630315 | Msa0426250:CDS | 30.0% | |
| ! | TTACATTTGCTTGTTGAGTT+TGG | + | chr3_2:76630440-76630459 | Msa0426250:three_prime_UTR | 30.0% |
| !! | CTTGTTGAGTTTGGAATTTT+TGG | + | chr3_2:76630449-76630468 | Msa0426250:three_prime_UTR | 30.0% |
| AGCTCAGTTCGTTAAATTAT+TGG | + | chr3_2:76630559-76630578 | Msa0426250:three_prime_UTR | 30.0% | |
| TGGTTAAATAATGCACTGAA+TGG | + | chr3_2:76630634-76630653 | Msa0426250:three_prime_UTR | 30.0% | |
| !!! | GTCTTCATTTTTTGATACTG+TGG | - | chr3_2:76629263-76629282 | None:intergenic | 30.0% |
| ! | TCTTTTCTCCAAGAAAGTTT+CGG | - | chr3_2:76629625-76629644 | None:intergenic | 30.0% |
| AAACTTTCTTGGAGAAAAGA+AGG | + | chr3_2:76629625-76629644 | Msa0426250:CDS | 30.0% | |
| ! | TTTACTAGTTTGTGAATCTG+TGG | + | chr3_2:76629986-76630005 | Msa0426250:intron | 30.0% |
| GAATAATGTTGTATTAGGTG+AGG | + | chr3_2:76630018-76630037 | Msa0426250:intron | 30.0% | |
| TGATATCCTTCTTCTTAACA+TGG | - | chr3_2:76630262-76630281 | None:intergenic | 30.0% | |
| ATGTTAAGAAGAAGGATATC+AGG | + | chr3_2:76630261-76630280 | Msa0426250:CDS | 30.0% | |
| TGGTATTTATGTTAGTGAGA+AGG | + | chr3_2:76630295-76630314 | Msa0426250:CDS | 30.0% | |
| GGTATTTATGTTAGTGAGAA+GGG | + | chr3_2:76630296-76630315 | Msa0426250:CDS | 30.0% | |
| ! | TTACATTTGCTTGTTGAGTT+TGG | + | chr3_2:76630440-76630459 | Msa0426250:three_prime_UTR | 30.0% |
| !! | CTTGTTGAGTTTGGAATTTT+TGG | + | chr3_2:76630449-76630468 | Msa0426250:three_prime_UTR | 30.0% |
| AGCTCAGTTCGTTAAATTAT+TGG | + | chr3_2:76630559-76630578 | Msa0426250:three_prime_UTR | 30.0% | |
| TGGTTAAATAATGCACTGAA+TGG | + | chr3_2:76630634-76630653 | Msa0426250:three_prime_UTR | 30.0% | |
| ATTGAGATCCGAAACTTTCT+TGG | + | chr3_2:76629614-76629633 | Msa0426250:CDS | 35.0% | |
| ! | AGGAAAGTAGATTTGCTTGA+TGG | + | chr3_2:76630038-76630057 | Msa0426250:CDS | 35.0% |
| TTCAATTGTTCGATCTGAGA+AGG | + | chr3_2:76630064-76630083 | Msa0426250:CDS | 35.0% | |
| ! | ATGACATTGAGCTTGTTTCT+AGG | + | chr3_2:76630114-76630133 | Msa0426250:CDS | 35.0% |
| ATGTTCATGGACCATGTTAA+GGG | - | chr3_2:76630167-76630186 | None:intergenic | 35.0% | |
| !! | GAATGTTGTTGTTGCGTTTT+TGG | + | chr3_2:76630226-76630245 | Msa0426250:intron | 35.0% |
| GAAATGCCATGTTAAGAAGA+AGG | + | chr3_2:76630253-76630272 | Msa0426250:intron | 35.0% | |
| GATATCAGGAAGTTTCTTGA+TGG | + | chr3_2:76630275-76630294 | Msa0426250:CDS | 35.0% | |
| TTATGTTAGTGAGAAGGGAT+CGG | + | chr3_2:76630301-76630320 | Msa0426250:CDS | 35.0% | |
| ! | ATTCAAGTTTCTGTTGGTCT+TGG | + | chr3_2:76630380-76630399 | Msa0426250:three_prime_UTR | 35.0% |
| !!! | TTGGATTGGTTACTGTTTTC+TGG | + | chr3_2:76630399-76630418 | Msa0426250:three_prime_UTR | 35.0% |
| !!! | TTTATTTTGGACGTATTCCG+TGG | + | chr3_2:76630771-76630790 | Msa0426250:three_prime_UTR | 35.0% |
| CATGTGTTACCTTAAATGGT+TGG | + | chr3_2:76630820-76630839 | Msa0426250:three_prime_UTR | 35.0% | |
| ATTGAGATCCGAAACTTTCT+TGG | + | chr3_2:76629614-76629633 | Msa0426250:CDS | 35.0% | |
| ! | AGGAAAGTAGATTTGCTTGA+TGG | + | chr3_2:76630038-76630057 | Msa0426250:CDS | 35.0% |
| TTCAATTGTTCGATCTGAGA+AGG | + | chr3_2:76630064-76630083 | Msa0426250:CDS | 35.0% | |
| ! | ATGACATTGAGCTTGTTTCT+AGG | + | chr3_2:76630114-76630133 | Msa0426250:CDS | 35.0% |
| ATGTTCATGGACCATGTTAA+GGG | - | chr3_2:76630167-76630186 | None:intergenic | 35.0% | |
| !! | GAATGTTGTTGTTGCGTTTT+TGG | + | chr3_2:76630226-76630245 | Msa0426250:intron | 35.0% |
| GAAATGCCATGTTAAGAAGA+AGG | + | chr3_2:76630253-76630272 | Msa0426250:intron | 35.0% | |
| GATATCAGGAAGTTTCTTGA+TGG | + | chr3_2:76630275-76630294 | Msa0426250:CDS | 35.0% | |
| TTATGTTAGTGAGAAGGGAT+CGG | + | chr3_2:76630301-76630320 | Msa0426250:CDS | 35.0% | |
| ! | ATTCAAGTTTCTGTTGGTCT+TGG | + | chr3_2:76630380-76630399 | Msa0426250:three_prime_UTR | 35.0% |
| !!! | TTGGATTGGTTACTGTTTTC+TGG | + | chr3_2:76630399-76630418 | Msa0426250:three_prime_UTR | 35.0% |
| !!! | TTTATTTTGGACGTATTCCG+TGG | + | chr3_2:76630771-76630790 | Msa0426250:three_prime_UTR | 35.0% |
| CATGTGTTACCTTAAATGGT+TGG | + | chr3_2:76630820-76630839 | Msa0426250:three_prime_UTR | 35.0% | |
| TGGAAATCTCACACACTCTA+CGG | - | chr3_2:76629243-76629262 | None:intergenic | 40.0% | |
| TAGCATCAAGGTTAACGCTA+AGG | + | chr3_2:76629322-76629341 | Msa0426250:CDS | 40.0% | |
| CTTCTTCTTGCCTTCTTCAT+CGG | - | chr3_2:76629423-76629442 | None:intergenic | 40.0% | |
| ACACAAACCTCATCTTGTAG+CGG | - | chr3_2:76629547-76629566 | None:intergenic | 40.0% | |
| !! | CTCAATCGACTTGTTGTCAT+TGG | - | chr3_2:76629600-76629619 | None:intergenic | 40.0% |
| !!! | AAGGATGAGGTTGTTTTGGA+TGG | + | chr3_2:76630089-76630108 | Msa0426250:CDS | 40.0% |
| GTCATGTGCACTTATTAACC+AGG | + | chr3_2:76630136-76630155 | Msa0426250:CDS | 40.0% | |
| TGTTCATGGACCATGTTAAG+GGG | - | chr3_2:76630166-76630185 | None:intergenic | 40.0% | |
| CATGTTCATGGACCATGTTA+AGG | - | chr3_2:76630168-76630187 | None:intergenic | 40.0% | |
| GGTGGTAACTGAAGAATAGA+TGG | + | chr3_2:76630322-76630341 | Msa0426250:exon | 40.0% | |
| !! | AGTTTCTGTTGGTCTTGGAT+TGG | + | chr3_2:76630385-76630404 | Msa0426250:three_prime_UTR | 40.0% |
| TGGAAATCTCACACACTCTA+CGG | - | chr3_2:76629243-76629262 | None:intergenic | 40.0% | |
| TAGCATCAAGGTTAACGCTA+AGG | + | chr3_2:76629322-76629341 | Msa0426250:CDS | 40.0% | |
| CTTCTTCTTGCCTTCTTCAT+CGG | - | chr3_2:76629423-76629442 | None:intergenic | 40.0% | |
| ACACAAACCTCATCTTGTAG+CGG | - | chr3_2:76629547-76629566 | None:intergenic | 40.0% | |
| !! | CTCAATCGACTTGTTGTCAT+TGG | - | chr3_2:76629600-76629619 | None:intergenic | 40.0% |
| !!! | AAGGATGAGGTTGTTTTGGA+TGG | + | chr3_2:76630089-76630108 | Msa0426250:CDS | 40.0% |
| GTCATGTGCACTTATTAACC+AGG | + | chr3_2:76630136-76630155 | Msa0426250:CDS | 40.0% | |
| TGTTCATGGACCATGTTAAG+GGG | - | chr3_2:76630166-76630185 | None:intergenic | 40.0% | |
| CATGTTCATGGACCATGTTA+AGG | - | chr3_2:76630168-76630187 | None:intergenic | 40.0% | |
| GGTGGTAACTGAAGAATAGA+TGG | + | chr3_2:76630322-76630341 | Msa0426250:exon | 40.0% | |
| !! | AGTTTCTGTTGGTCTTGGAT+TGG | + | chr3_2:76630385-76630404 | Msa0426250:three_prime_UTR | 40.0% |
| GTCAGGGATGTTCATGGTTT+CGG | - | chr3_2:76629297-76629316 | None:intergenic | 45.0% | |
| GAAACCATGAACATCCCTGA+CGG | + | chr3_2:76629296-76629315 | Msa0426250:CDS | 45.0% | |
| CGGTGATGAGATCAAAATCG+AGG | - | chr3_2:76629403-76629422 | None:intergenic | 45.0% | |
| GATCTCATCACCGATGAAGA+AGG | + | chr3_2:76629410-76629429 | Msa0426250:CDS | 45.0% | |
| CAGTGATGAGATTCTCAACG+TGG | - | chr3_2:76629508-76629527 | None:intergenic | 45.0% | |
| CACGTTGAGAATCTCATCAC+TGG | + | chr3_2:76629506-76629525 | Msa0426250:CDS | 45.0% | |
| !! | TTGGTGATGCTAGCGTTGAT+GGG | - | chr3_2:76629581-76629600 | None:intergenic | 45.0% |
| !! | ATTGGTGATGCTAGCGTTGA+TGG | - | chr3_2:76629582-76629601 | None:intergenic | 45.0% |
| TGTTCGATCTGAGAAGGTGA+AGG | + | chr3_2:76630070-76630089 | Msa0426250:CDS | 45.0% | |
| ATCTGAGAAGGTGAAGGATG+AGG | + | chr3_2:76630076-76630095 | Msa0426250:CDS | 45.0% | |
| ! | GGTGAAGGATGAGGTTGTTT+TGG | + | chr3_2:76630085-76630104 | Msa0426250:CDS | 45.0% |
| GAAAGCTCAGAGTATGAGTC+TGG | + | chr3_2:76630745-76630764 | Msa0426250:three_prime_UTR | 45.0% | |
| GTCAGGGATGTTCATGGTTT+CGG | - | chr3_2:76629297-76629316 | None:intergenic | 45.0% | |
| GAAACCATGAACATCCCTGA+CGG | + | chr3_2:76629296-76629315 | Msa0426250:CDS | 45.0% | |
| CGGTGATGAGATCAAAATCG+AGG | - | chr3_2:76629403-76629422 | None:intergenic | 45.0% | |
| GATCTCATCACCGATGAAGA+AGG | + | chr3_2:76629410-76629429 | Msa0426250:CDS | 45.0% | |
| CAGTGATGAGATTCTCAACG+TGG | - | chr3_2:76629508-76629527 | None:intergenic | 45.0% | |
| CACGTTGAGAATCTCATCAC+TGG | + | chr3_2:76629506-76629525 | Msa0426250:CDS | 45.0% | |
| !! | TTGGTGATGCTAGCGTTGAT+GGG | - | chr3_2:76629581-76629600 | None:intergenic | 45.0% |
| !! | ATTGGTGATGCTAGCGTTGA+TGG | - | chr3_2:76629582-76629601 | None:intergenic | 45.0% |
| TGTTCGATCTGAGAAGGTGA+AGG | + | chr3_2:76630070-76630089 | Msa0426250:CDS | 45.0% | |
| ATCTGAGAAGGTGAAGGATG+AGG | + | chr3_2:76630076-76630095 | Msa0426250:CDS | 45.0% | |
| ! | GGTGAAGGATGAGGTTGTTT+TGG | + | chr3_2:76630085-76630104 | Msa0426250:CDS | 45.0% |
| GAAAGCTCAGAGTATGAGTC+TGG | + | chr3_2:76630745-76630764 | Msa0426250:three_prime_UTR | 45.0% | |
| TCTGTGTTTGCAGCACTCTC+CGG | - | chr3_2:76629216-76629235 | None:intergenic | 50.0% | |
| TGTTCATGGTTTCGGAGGAG+AGG | - | chr3_2:76629289-76629308 | None:intergenic | 50.0% | |
| AGGGATGTTCATGGTTTCGG+AGG | - | chr3_2:76629294-76629313 | None:intergenic | 50.0% | |
| GCTAAGGTCATCGAAGTCGA+AGG | + | chr3_2:76629338-76629357 | Msa0426250:CDS | 50.0% | |
| AGAAGCTCAAGATCGATGCC+TGG | + | chr3_2:76629438-76629457 | Msa0426250:CDS | 50.0% | |
| CTCAAGATCGATGCCTGGTT+CGG | + | chr3_2:76629443-76629462 | Msa0426250:CDS | 50.0% | |
| !! | TCTCATCACTGGTGTCACCA+AGG | + | chr3_2:76629517-76629536 | Msa0426250:CDS | 50.0% |
| !! | CTCATCACTGGTGTCACCAA+GGG | + | chr3_2:76629518-76629537 | Msa0426250:CDS | 50.0% |
| ! | CATCTTGTAGCGGAAACCCT+TGG | - | chr3_2:76629537-76629556 | None:intergenic | 50.0% |
| AGGGTTTCCGCTACAAGATG+AGG | + | chr3_2:76629537-76629556 | Msa0426250:CDS | 50.0% | |
| !! | TGGTGATGCTAGCGTTGATG+GGG | - | chr3_2:76629580-76629599 | None:intergenic | 50.0% |
| ACCAGGTACACCCCTTAACA+TGG | + | chr3_2:76630153-76630172 | Msa0426250:intron | 50.0% | |
| ! | ACCATGTTAAGGGGTGTACC+TGG | - | chr3_2:76630157-76630176 | None:intergenic | 50.0% |
| TGTTAGTGAGAAGGGATCGG+TGG | + | chr3_2:76630304-76630323 | Msa0426250:CDS | 50.0% | |
| TCTGTGTTTGCAGCACTCTC+CGG | - | chr3_2:76629216-76629235 | None:intergenic | 50.0% | |
| TGTTCATGGTTTCGGAGGAG+AGG | - | chr3_2:76629289-76629308 | None:intergenic | 50.0% | |
| AGGGATGTTCATGGTTTCGG+AGG | - | chr3_2:76629294-76629313 | None:intergenic | 50.0% | |
| GCTAAGGTCATCGAAGTCGA+AGG | + | chr3_2:76629338-76629357 | Msa0426250:CDS | 50.0% | |
| AGAAGCTCAAGATCGATGCC+TGG | + | chr3_2:76629438-76629457 | Msa0426250:CDS | 50.0% | |
| CTCAAGATCGATGCCTGGTT+CGG | + | chr3_2:76629443-76629462 | Msa0426250:CDS | 50.0% | |
| !! | TCTCATCACTGGTGTCACCA+AGG | + | chr3_2:76629517-76629536 | Msa0426250:CDS | 50.0% |
| !! | CTCATCACTGGTGTCACCAA+GGG | + | chr3_2:76629518-76629537 | Msa0426250:CDS | 50.0% |
| ! | CATCTTGTAGCGGAAACCCT+TGG | - | chr3_2:76629537-76629556 | None:intergenic | 50.0% |
| AGGGTTTCCGCTACAAGATG+AGG | + | chr3_2:76629537-76629556 | Msa0426250:CDS | 50.0% | |
| !! | TGGTGATGCTAGCGTTGATG+GGG | - | chr3_2:76629580-76629599 | None:intergenic | 50.0% |
| ACCAGGTACACCCCTTAACA+TGG | + | chr3_2:76630153-76630172 | Msa0426250:intron | 50.0% | |
| ! | ACCATGTTAAGGGGTGTACC+TGG | - | chr3_2:76630157-76630176 | None:intergenic | 50.0% |
| TGTTAGTGAGAAGGGATCGG+TGG | + | chr3_2:76630304-76630323 | Msa0426250:CDS | 50.0% | |
| CATGGTTTCGGAGGAGAGGA+TGG | - | chr3_2:76629285-76629304 | None:intergenic | 55.0% | |
| AACGCCGTCAGGGATGTTCA+TGG | - | chr3_2:76629303-76629322 | None:intergenic | 55.0% | |
| CCTTGATGCTAACGCCGTCA+GGG | - | chr3_2:76629313-76629332 | None:intergenic | 55.0% | |
| ACCTTGATGCTAACGCCGTC+AGG | - | chr3_2:76629314-76629333 | None:intergenic | 55.0% | |
| ATCGAAGTCGAAGGACCTCG+CGG | + | chr3_2:76629347-76629366 | Msa0426250:CDS | 55.0% | |
| ! | GGTTTTCCTGGAACCGAACC+AGG | - | chr3_2:76629459-76629478 | None:intergenic | 55.0% |
| ! | GCTGAGAGCAGTTCTGATGG+CGG | - | chr3_2:76629486-76629505 | None:intergenic | 55.0% |
| ! | GTGGCTGAGAGCAGTTCTGA+TGG | - | chr3_2:76629489-76629508 | None:intergenic | 55.0% |
| CATGGTTTCGGAGGAGAGGA+TGG | - | chr3_2:76629285-76629304 | None:intergenic | 55.0% | |
| AACGCCGTCAGGGATGTTCA+TGG | - | chr3_2:76629303-76629322 | None:intergenic | 55.0% | |
| CCTTGATGCTAACGCCGTCA+GGG | - | chr3_2:76629313-76629332 | None:intergenic | 55.0% | |
| ACCTTGATGCTAACGCCGTC+AGG | - | chr3_2:76629314-76629333 | None:intergenic | 55.0% | |
| ATCGAAGTCGAAGGACCTCG+CGG | + | chr3_2:76629347-76629366 | Msa0426250:CDS | 55.0% | |
| ! | GGTTTTCCTGGAACCGAACC+AGG | - | chr3_2:76629459-76629478 | None:intergenic | 55.0% |
| ! | GCTGAGAGCAGTTCTGATGG+CGG | - | chr3_2:76629486-76629505 | None:intergenic | 55.0% |
| ! | GTGGCTGAGAGCAGTTCTGA+TGG | - | chr3_2:76629489-76629508 | None:intergenic | 55.0% |
| CCCTGACGGCGTTAGCATCA+AGG | + | chr3_2:76629310-76629329 | Msa0426250:CDS | 60.0% | |
| TCGAAGTCGAAGGACCTCGC+GGG | + | chr3_2:76629348-76629367 | Msa0426250:CDS | 60.0% | |
| TCACGAACAAGCTTCCCGCG+AGG | - | chr3_2:76629365-76629384 | None:intergenic | 60.0% | |
| !! | TCGATGCCTGGTTCGGTTCC+AGG | + | chr3_2:76629450-76629469 | Msa0426250:CDS | 60.0% |
| !! | GAGAGCAGTTCTGATGGCGG+CGG | - | chr3_2:76629483-76629502 | None:intergenic | 60.0% |
| CCCTGACGGCGTTAGCATCA+AGG | + | chr3_2:76629310-76629329 | Msa0426250:CDS | 60.0% | |
| TCGAAGTCGAAGGACCTCGC+GGG | + | chr3_2:76629348-76629367 | Msa0426250:CDS | 60.0% | |
| TCACGAACAAGCTTCCCGCG+AGG | - | chr3_2:76629365-76629384 | None:intergenic | 60.0% | |
| !! | TCGATGCCTGGTTCGGTTCC+AGG | + | chr3_2:76629450-76629469 | Msa0426250:CDS | 60.0% |
| !! | GAGAGCAGTTCTGATGGCGG+CGG | - | chr3_2:76629483-76629502 | None:intergenic | 60.0% |
| !! | GATGGCGGCGGAGGTTTTCC+TGG | - | chr3_2:76629471-76629490 | None:intergenic | 65.0% |
| !! | AGCAGTTCTGATGGCGGCGG+AGG | - | chr3_2:76629480-76629499 | None:intergenic | 65.0% |
| !! | GATGGCGGCGGAGGTTTTCC+TGG | - | chr3_2:76629471-76629490 | None:intergenic | 65.0% |
| !! | AGCAGTTCTGATGGCGGCGG+AGG | - | chr3_2:76629480-76629499 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 76629213 | 76630869 | 76629213 | ID=Msa0426250;Name=Msa0426250 |
| chr3_2 | mRNA | 76629213 | 76630869 | 76629213 | ID=Msa0426250-mRNA-1;Parent=Msa0426250;Name=Msa0426250-mRNA-1;_AED=0.04;_eAED=0.04;_QI=62|1|1|1|1|1|3|529|193 |
| chr3_2 | exon | 76629213 | 76629646 | 76629213 | ID=Msa0426250-mRNA-1:exon:19805;Parent=Msa0426250-mRNA-1 |
| chr3_2 | exon | 76630035 | 76630157 | 76630035 | ID=Msa0426250-mRNA-1:exon:19806;Parent=Msa0426250-mRNA-1 |
| chr3_2 | exon | 76630254 | 76630869 | 76630254 | ID=Msa0426250-mRNA-1:exon:19807;Parent=Msa0426250-mRNA-1 |
| chr3_2 | five_prime_UTR | 76629213 | 76629274 | 76629213 | ID=Msa0426250-mRNA-1:five_prime_utr;Parent=Msa0426250-mRNA-1 |
| chr3_2 | CDS | 76629275 | 76629646 | 76629275 | ID=Msa0426250-mRNA-1:cds;Parent=Msa0426250-mRNA-1 |
| chr3_2 | CDS | 76630035 | 76630157 | 76630035 | ID=Msa0426250-mRNA-1:cds;Parent=Msa0426250-mRNA-1 |
| chr3_2 | CDS | 76630254 | 76630340 | 76630254 | ID=Msa0426250-mRNA-1:cds;Parent=Msa0426250-mRNA-1 |
| chr3_2 | three_prime_UTR | 76630341 | 76630869 | 76630341 | ID=Msa0426250-mRNA-1:three_prime_utr;Parent=Msa0426250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
