Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083370 | XP_003626150.1 | 99.034 | 207 | 2 | 0 | 1 | 207 | 1 | 207 | 2.28e-147 | 418 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083370 | sp|P41129|RL132_BRANA | 85.922 | 206 | 29 | 0 | 2 | 207 | 1 | 206 | 3.23e-131 | 370 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083370 | G7KWF6 | 99.034 | 207 | 2 | 0 | 1 | 207 | 1 | 207 | 1.09e-147 | 418 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1083370 | 0.827565 | 1.458260e-54 | -8.615850e-47 |
| Msa0003330 | Msa1083370 | 0.813924 | 2.000657e-51 | -8.615850e-47 |
| Msa0003360 | Msa1083370 | 0.816015 | 6.876114e-52 | -8.615850e-47 |
| Msa0016350 | Msa1083370 | 0.818830 | 1.597253e-52 | -8.615850e-47 |
| Msa0021290 | Msa1083370 | 0.803012 | 4.270480e-49 | -8.615850e-47 |
| Msa0027590 | Msa1083370 | 0.894951 | 1.520052e-75 | -8.615850e-47 |
| Msa0032780 | Msa1083370 | 0.806811 | 6.862996e-50 | -8.615850e-47 |
| Msa0040220 | Msa1083370 | 0.914532 | 1.716590e-84 | -8.615850e-47 |
| Msa0042480 | Msa1083370 | 0.809870 | 1.528104e-50 | -8.615850e-47 |
| Msa0047650 | Msa1083370 | 0.802261 | 6.099912e-49 | -8.615850e-47 |
| Msa0050860 | Msa1083370 | 0.805455 | 1.323673e-49 | -8.615850e-47 |
| Msa0068970 | Msa1083370 | 0.805827 | 1.106232e-49 | -8.615850e-47 |
| Msa0070840 | Msa1083370 | 0.850317 | 1.835762e-60 | -8.615850e-47 |
| Msa0072570 | Msa1083370 | 0.812122 | 4.969860e-51 | -8.615850e-47 |
| Msa0075350 | Msa1083370 | 0.877349 | 6.748485e-69 | -8.615850e-47 |
| Msa0079590 | Msa1083370 | 0.818372 | 2.028321e-52 | -8.615850e-47 |
| Msa0087910 | Msa1083370 | 0.896716 | 2.824833e-76 | -8.615850e-47 |
| Msa0114570 | Msa1083370 | 0.804506 | 2.090954e-49 | -8.615850e-47 |
| Msa0114600 | Msa1083370 | 0.801889 | 7.277465e-49 | -8.615850e-47 |
| Msa0602900 | Msa1083370 | 0.831157 | 1.956933e-55 | -8.615850e-47 |
| Msa0605890 | Msa1083370 | 0.833412 | 5.414359e-56 | -8.615850e-47 |
| Msa0608260 | Msa1083370 | 0.824439 | 8.066038e-54 | -8.615850e-47 |
| Msa0619230 | Msa1083370 | 0.829249 | 5.720859e-55 | -8.615850e-47 |
| Msa0622230 | Msa1083370 | 0.844030 | 9.728664e-59 | -8.615850e-47 |
| Msa0643820 | Msa1083370 | 0.819608 | 1.062191e-52 | -8.615850e-47 |
| Msa0643960 | Msa1083370 | 0.837664 | 4.549779e-57 | -8.615850e-47 |
| Msa0648620 | Msa1083370 | 0.811316 | 7.442242e-51 | -8.615850e-47 |
| Msa0648670 | Msa1083370 | 0.816150 | 6.415685e-52 | -8.615850e-47 |
| Msa0653060 | Msa1083370 | 0.907131 | 7.053289e-81 | -8.615850e-47 |
| Msa0691330 | Msa1083370 | 0.815643 | 8.321492e-52 | -8.615850e-47 |
| Msa0694400 | Msa1083370 | 0.869587 | 2.769031e-66 | -8.615850e-47 |
| Msa0705800 | Msa1083370 | 0.864168 | 1.476754e-64 | -8.615850e-47 |
| Msa0708630 | Msa1083370 | 0.831459 | 1.649063e-55 | -8.615850e-47 |
| Msa0712610 | Msa1083370 | 0.813163 | 2.940965e-51 | -8.615850e-47 |
| Msa0717380 | Msa1083370 | 0.843373 | 1.458604e-58 | -8.615850e-47 |
| Msa0748350 | Msa1083370 | 0.835778 | 1.376297e-56 | -8.615850e-47 |
| Msa0781080 | Msa1083370 | 0.803362 | 3.614271e-49 | -8.615850e-47 |
| Msa0781310 | Msa1083370 | 0.807005 | 6.244544e-50 | -8.615850e-47 |
| Msa0783630 | Msa1083370 | 0.801186 | 1.014015e-48 | -8.615850e-47 |
| Msa0788380 | Msa1083370 | 0.886649 | 2.846312e-72 | -8.615850e-47 |
| Msa0790450 | Msa1083370 | 0.808220 | 3.446991e-50 | -8.615850e-47 |
| Msa0799830 | Msa1083370 | 0.866472 | 2.780443e-65 | -8.615850e-47 |
| Msa0817030 | Msa1083370 | 0.802214 | 6.238654e-49 | -8.615850e-47 |
| Msa0822580 | Msa1083370 | 0.816886 | 4.387723e-52 | -8.615850e-47 |
| Msa0838070 | Msa1083370 | 0.812867 | 3.414929e-51 | -8.615850e-47 |
| Msa0128330 | Msa1083370 | 0.834569 | 2.778399e-56 | -8.615850e-47 |
| Msa0132460 | Msa1083370 | 0.831694 | 1.443852e-55 | -8.615850e-47 |
| Msa0134580 | Msa1083370 | 0.881933 | 1.588755e-70 | -8.615850e-47 |
| Msa0138890 | Msa1083370 | 0.824200 | 9.181567e-54 | -8.615850e-47 |
| Msa0144810 | Msa1083370 | 0.808702 | 2.719571e-50 | -8.615850e-47 |
| Msa0146580 | Msa1083370 | 0.830248 | 3.268332e-55 | -8.615850e-47 |
| Msa0167860 | Msa1083370 | 0.840671 | 7.555441e-58 | -8.615850e-47 |
| Msa0174580 | Msa1083370 | 0.824365 | 8.397279e-54 | -8.615850e-47 |
| Msa0182050 | Msa1083370 | 0.835612 | 1.516380e-56 | -8.615850e-47 |
| Msa0186740 | Msa1083370 | 0.819519 | 1.113288e-52 | -8.615850e-47 |
| Msa0191450 | Msa1083370 | 0.875441 | 3.074114e-68 | -8.615850e-47 |
| Msa0191550 | Msa1083370 | 0.870394 | 1.508170e-66 | -8.615850e-47 |
| Msa0192300 | Msa1083370 | 0.818035 | 2.418318e-52 | -8.615850e-47 |
| Msa0192750 | Msa1083370 | 0.854355 | 1.300674e-61 | -8.615850e-47 |
| Msa0194940 | Msa1083370 | 0.875087 | 4.061335e-68 | -8.615850e-47 |
| Msa0210330 | Msa1083370 | 0.864054 | 1.601565e-64 | -8.615850e-47 |
| Msa0210360 | Msa1083370 | 0.877587 | 5.575509e-69 | -8.615850e-47 |
| Msa0222730 | Msa1083370 | 0.861878 | 7.527965e-64 | -8.615850e-47 |
| Msa0223440 | Msa1083370 | 0.832931 | 7.134010e-56 | -8.615850e-47 |
| Msa0228540 | Msa1083370 | 0.817163 | 3.801841e-52 | -8.615850e-47 |
| Msa0235050 | Msa1083370 | 0.845550 | 3.786412e-59 | -8.615850e-47 |
| Msa0369410 | Msa1083370 | 0.888314 | 6.590346e-73 | -8.615850e-47 |
| Msa0371490 | Msa1083370 | 0.800785 | 1.224298e-48 | -8.615850e-47 |
| Msa0377520 | Msa1083370 | 0.832533 | 8.956454e-56 | -8.615850e-47 |
| Msa0382960 | Msa1083370 | 0.812792 | 3.547574e-51 | -8.615850e-47 |
| Msa0426090 | Msa1083370 | 0.919849 | 2.688302e-87 | -8.615850e-47 |
| Msa0426250 | Msa1083370 | 0.907479 | 4.847659e-81 | -8.615850e-47 |
| Msa0463520 | Msa1083370 | 0.859340 | 4.425828e-63 | -8.615850e-47 |
| Msa0472480 | Msa1083370 | 0.919236 | 5.791993e-87 | -8.615850e-47 |
| Msa0475810 | Msa1083370 | 0.919223 | 5.883628e-87 | -8.615850e-47 |
| Msa0481520 | Msa1083370 | 0.893264 | 7.393012e-75 | -8.615850e-47 |
| Msa0481850 | Msa1083370 | 0.825661 | 4.150677e-54 | -8.615850e-47 |
| Msa0482560 | Msa1083370 | 0.813585 | 2.375660e-51 | -8.615850e-47 |
| Msa1037290 | Msa1083370 | 0.858576 | 7.495387e-63 | -8.615850e-47 |
| Msa1040160 | Msa1083370 | 0.972988 | 1.129547e-135 | -8.615850e-47 |
| Msa1041680 | Msa1083370 | 0.875664 | 2.578371e-68 | -8.615850e-47 |
| Msa1042100 | Msa1083370 | 0.804093 | 2.549073e-49 | -8.615850e-47 |
| Msa1050100 | Msa1083370 | 0.829936 | 3.895202e-55 | -8.615850e-47 |
| Msa1054280 | Msa1083370 | 0.868819 | 4.918280e-66 | -8.615850e-47 |
| Msa1058700 | Msa1083370 | 0.849713 | 2.710331e-60 | -8.615850e-47 |
| Msa1078870 | Msa1083370 | 0.822675 | 2.086819e-53 | -8.615850e-47 |
| Msa1078980 | Msa1083370 | 0.852941 | 3.317282e-61 | -8.615850e-47 |
| Msa1079910 | Msa1083370 | 0.813298 | 2.747293e-51 | -8.615850e-47 |
| Msa1079920 | Msa1083370 | 0.801779 | 7.664429e-49 | -8.615850e-47 |
| Msa1080350 | Msa1083370 | 0.820160 | 7.944655e-53 | -8.615850e-47 |
| Msa1082170 | Msa1083370 | 0.856984 | 2.223085e-62 | -8.615850e-47 |
| Msa1083370 | Msa1089220 | 0.803741 | 3.015819e-49 | -8.615850e-47 |
| Msa1083370 | Msa1096900 | 0.819925 | 8.988534e-53 | -8.615850e-47 |
| Msa1083370 | Msa1116940 | 0.859126 | 5.130130e-63 | -8.615850e-47 |
| Msa1083370 | Msa1124850 | 0.868568 | 5.927368e-66 | -8.615850e-47 |
| Msa1083370 | Msa1125860 | 0.807512 | 4.874768e-50 | -8.615850e-47 |
| Msa1083370 | Msa1126060 | 0.811981 | 5.334493e-51 | -8.615850e-47 |
| Msa1083370 | Msa1126520 | 0.825995 | 3.458590e-54 | -8.615850e-47 |
| Msa1083370 | Msa1128120 | 0.854356 | 1.299584e-61 | -8.615850e-47 |
| Msa1083370 | Msa1164150 | 0.853291 | 2.633437e-61 | -8.615850e-47 |
| Msa1083370 | Msa1165640 | 0.847073 | 1.456348e-59 | -8.615850e-47 |
| Msa1083370 | Msa1166570 | 0.879986 | 7.956173e-70 | -8.615850e-47 |
| Msa1083370 | Msa1167540 | 0.870849 | 1.069197e-66 | -8.615850e-47 |
| Msa1083370 | Msa1167550 | 0.894567 | 2.183955e-75 | -8.615850e-47 |
| Msa1083370 | Msa1169180 | 0.838177 | 3.356628e-57 | -8.615850e-47 |
| Msa1083370 | Msa1180000 | 0.849101 | 4.014088e-60 | -8.615850e-47 |
| Msa1083370 | Msa1186030 | 0.904338 | 1.362441e-79 | -8.615850e-47 |
| Msa1083370 | Msa1203560 | 0.820278 | 7.462077e-53 | -8.615850e-47 |
| Msa1083370 | Msa1206240 | 0.812374 | 4.378958e-51 | -8.615850e-47 |
| Msa1083370 | Msa1218170 | 0.851404 | 9.072175e-61 | -8.615850e-47 |
| Msa1083370 | Msa1227080 | 0.809624 | 1.725679e-50 | -8.615850e-47 |
| Msa1083370 | Msa1235950 | 0.806274 | 8.906836e-50 | -8.615850e-47 |
| Msa1083370 | Msa1235980 | 0.814059 | 1.868322e-51 | -8.615850e-47 |
| Msa1083370 | Msa1237040 | 0.871203 | 8.171253e-67 | -8.615850e-47 |
| Msa1083370 | Msa1240270 | 0.898393 | 5.543074e-77 | -8.615850e-47 |
| Msa1083370 | Msa1258540 | 0.879158 | 1.566050e-69 | -8.615850e-47 |
| Msa1083370 | Msa1270640 | 0.836407 | 9.531284e-57 | -8.615850e-47 |
| Msa1083370 | Msa1270710 | 0.831768 | 1.384194e-55 | -8.615850e-47 |
| Msa1083370 | Msa1278130 | 0.871375 | 7.167502e-67 | -8.615850e-47 |
| Msa1083370 | Msa1284060 | 0.820531 | 6.529532e-53 | -8.615850e-47 |
| Msa1083370 | Msa1295150 | 0.800400 | 1.467120e-48 | -8.615850e-47 |
| Msa1083370 | Msa1311400 | 0.855558 | 5.820805e-62 | -8.615850e-47 |
| Msa1083370 | Msa1316100 | 0.803748 | 3.006754e-49 | -8.615850e-47 |
| Msa1083370 | Msa1317390 | 0.847812 | 9.123354e-60 | -8.615850e-47 |
| Msa1083370 | Msa1332250 | 0.815910 | 7.255622e-52 | -8.615850e-47 |
| Msa1083370 | Msa1341130 | 0.812400 | 4.320538e-51 | -8.615850e-47 |
| Msa1083370 | Msa1341780 | 0.816691 | 4.853226e-52 | -8.615850e-47 |
| Msa1083370 | Msa1351020 | 0.801599 | 8.345099e-49 | -8.615850e-47 |
| Msa1083370 | Msa1351910 | 0.814731 | 1.326672e-51 | -8.615850e-47 |
| Msa1083370 | Msa1352140 | 0.806641 | 7.454670e-50 | -8.615850e-47 |
| Msa1083370 | Msa1356790 | 0.821170 | 4.655909e-53 | -8.615850e-47 |
| Msa1083370 | Msa1358710 | 0.817180 | 3.769750e-52 | -8.615850e-47 |
| Msa1083370 | Msa1364110 | 0.812360 | 4.409572e-51 | -8.615850e-47 |
| Msa1083370 | Msa1368920 | 0.859281 | 4.610613e-63 | -8.615850e-47 |
| Msa1083370 | Msa1374240 | 0.800460 | 1.426104e-48 | -8.615850e-47 |
| Msa1083370 | Msa1385480 | 0.845174 | 4.788081e-59 | -8.615850e-47 |
| Msa1083370 | Msa1390760 | 0.825259 | 5.167233e-54 | -8.615850e-47 |
| Msa1083370 | Msa1392590 | 0.865765 | 4.658596e-65 | -8.615850e-47 |
| Msa1083370 | Msa1403910 | 0.824509 | 7.768900e-54 | -8.615850e-47 |
| Msa1083370 | Msa1410570 | 0.818356 | 2.045715e-52 | -8.615850e-47 |
| Msa1083370 | Msa1418770 | 0.808958 | 2.397894e-50 | -8.615850e-47 |
| Msa1083370 | Msa1426120 | 0.840365 | 9.085358e-58 | -8.615850e-47 |
| Msa1083370 | Msa1426490 | 0.812924 | 3.318674e-51 | -8.615850e-47 |
| Msa1083370 | Msa1449160 | 0.823980 | 1.034324e-53 | -8.615850e-47 |
| Msa1083370 | Msa1450560 | 0.815628 | 8.386249e-52 | -8.615850e-47 |
| Msa1083370 | Msa1463570 | 0.835585 | 1.539929e-56 | -8.615850e-47 |
| Msa1083370 | Msa1465700 | 0.815690 | 8.124920e-52 | -8.615850e-47 |
| Msa0264640 | Msa1083370 | 0.832834 | 7.541070e-56 | -8.615850e-47 |
| Msa0265250 | Msa1083370 | 0.812579 | 3.949171e-51 | -8.615850e-47 |
| Msa0269180 | Msa1083370 | 0.833352 | 5.601520e-56 | -8.615850e-47 |
| Msa0277600 | Msa1083370 | 0.821156 | 4.690265e-53 | -8.615850e-47 |
| Msa0281330 | Msa1083370 | 0.811812 | 5.805612e-51 | -8.615850e-47 |
| Msa0281370 | Msa1083370 | 0.839691 | 1.361635e-57 | -8.615850e-47 |
| Msa0297830 | Msa1083370 | 0.896110 | 5.051263e-76 | -8.615850e-47 |
| Msa0298870 | Msa1083370 | 0.816986 | 4.167731e-52 | -8.615850e-47 |
| Msa0301220 | Msa1083370 | 0.895956 | 5.850220e-76 | -8.615850e-47 |
| Msa0301250 | Msa1083370 | 0.816697 | 4.837475e-52 | -8.615850e-47 |
| Msa0312210 | Msa1083370 | 0.825072 | 5.722855e-54 | -8.615850e-47 |
| Msa0313060 | Msa1083370 | 0.831880 | 1.298781e-55 | -8.615850e-47 |
| Msa0315430 | Msa1083370 | 0.851997 | 6.160489e-61 | -8.615850e-47 |
| Msa0335840 | Msa1083370 | 0.906206 | 1.901006e-80 | -8.615850e-47 |
| Msa0340560 | Msa1083370 | 0.863061 | 3.257134e-64 | -8.615850e-47 |
| Msa0342850 | Msa1083370 | 0.862940 | 3.550298e-64 | -8.615850e-47 |
| Msa0346090 | Msa1083370 | 0.807619 | 4.625680e-50 | -8.615850e-47 |
| Msa0483110 | Msa1083370 | 0.811255 | 7.670467e-51 | -8.615850e-47 |
| Msa0517480 | Msa1083370 | 0.854650 | 1.068809e-61 | -8.615850e-47 |
| Msa0529900 | Msa1083370 | 0.849058 | 4.125638e-60 | -8.615850e-47 |
| Msa0540480 | Msa1083370 | 0.842753 | 2.132910e-58 | -8.615850e-47 |
| Msa0544720 | Msa1083370 | 0.807002 | 6.252212e-50 | -8.615850e-47 |
| Msa0547920 | Msa1083370 | 0.847980 | 8.203222e-60 | -8.615850e-47 |
| Msa0550420 | Msa1083370 | 0.831342 | 1.762223e-55 | -8.615850e-47 |
| Msa0557720 | Msa1083370 | 0.810186 | 1.306375e-50 | -8.615850e-47 |
| Msa0573550 | Msa1083370 | 0.860713 | 1.705006e-63 | -8.615850e-47 |
| Msa0582070 | Msa1083370 | 0.820225 | 7.674892e-53 | -8.615850e-47 |
| Msa0596370 | Msa1083370 | 0.858734 | 6.720645e-63 | -8.615850e-47 |
| Msa0597240 | Msa1083370 | 0.868639 | 5.624334e-66 | -8.615850e-47 |
| Msa0860860 | Msa1083370 | 0.805981 | 1.026818e-49 | -8.615850e-47 |
| Msa0861320 | Msa1083370 | 0.865846 | 4.389314e-65 | -8.615850e-47 |
| Msa0915540 | Msa1083370 | 0.848282 | 6.769070e-60 | -8.615850e-47 |
| Msa0929680 | Msa1083370 | 0.837435 | 5.208292e-57 | -8.615850e-47 |
| Msa0929700 | Msa1083370 | 0.876316 | 1.538097e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083370 | MtrunA17_Chr7g0271401 | 99.034 | 207 | 2 | 0 | 1 | 207 | 1 | 207 | 2.09e-151 | 418 |
| Msa1083370 | MtrunA17_Chr5g0409231 | 98.551 | 207 | 3 | 0 | 1 | 207 | 1 | 207 | 1.03e-150 | 416 |
| Msa1083370 | MtrunA17_Chr1g0155011 | 97.585 | 207 | 5 | 0 | 1 | 207 | 1 | 207 | 2.47e-149 | 413 |
| Msa1083370 | MtrunA17_Chr8g0369561 | 86.538 | 52 | 7 | 0 | 133 | 184 | 6 | 57 | 5.28e-27 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083370 | AT3G49010.3 | 87.435 | 191 | 24 | 0 | 2 | 192 | 1 | 191 | 2.48e-126 | 355 |
| Msa1083370 | AT3G49010.6 | 87.435 | 191 | 24 | 0 | 2 | 192 | 1 | 191 | 2.48e-126 | 355 |
| Msa1083370 | AT3G49010.1 | 87.435 | 191 | 24 | 0 | 2 | 192 | 1 | 191 | 2.48e-126 | 355 |
| Msa1083370 | AT3G49010.2 | 87.435 | 191 | 24 | 0 | 2 | 192 | 1 | 191 | 2.48e-126 | 355 |
| Msa1083370 | AT3G49010.7 | 87.435 | 191 | 24 | 0 | 2 | 192 | 1 | 191 | 2.48e-126 | 355 |
| Msa1083370 | AT3G49010.4 | 86.387 | 191 | 24 | 1 | 2 | 192 | 1 | 189 | 4.17e-123 | 347 |
| Msa1083370 | AT5G23900.1 | 85.484 | 186 | 27 | 0 | 2 | 187 | 1 | 186 | 1.72e-119 | 338 |
| Msa1083370 | AT3G48960.1 | 77.083 | 192 | 44 | 0 | 2 | 193 | 1 | 192 | 4.73e-109 | 311 |
| Msa1083370 | AT3G49010.5 | 61.257 | 191 | 21 | 1 | 2 | 192 | 1 | 138 | 3.91e-78 | 231 |
Find 73 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGAAATGAAGGCATTTA+AGG | 0.167170 | 7_2:+83659223 | Msa1083370:CDS |
| CGTCTTCTCGTCTTCCTTGC+AGG | 0.238053 | 7_2:-83657585 | None:intergenic |
| TGTTGGTTTAACTAGCATTC+TGG | 0.306744 | 7_2:+83659489 | Msa1083370:three_prime_UTR |
| AAGAGTAATGTGGCAGAAAA+TGG | 0.317572 | 7_2:-83656937 | None:intergenic |
| TTGACCTTGCGTGCACGTCT+TGG | 0.342253 | 7_2:-83658959 | None:intergenic |
| GCGAACAAACAAACGCCATT+TGG | 0.357834 | 7_2:+83659268 | Msa1083370:CDS |
| CGAACAAACAAACGCCATTT+GGG | 0.361720 | 7_2:+83659269 | Msa1083370:CDS |
| AGTGGTCCAGCTGTAGGCCT+TGG | 0.374314 | 7_2:-83657755 | None:intergenic |
| TGCTTGCGGAAGTGTTCATT+AGG | 0.386045 | 7_2:-83657528 | None:intergenic |
| TGACCTTGCGTGCACGTCTT+GGG | 0.387927 | 7_2:-83658958 | None:intergenic |
| TGAGTCTGTCCATGAACAAT+AGG | 0.403921 | 7_2:-83657782 | None:intergenic |
| AGAAATACAACATGAAACTA+AGG | 0.404501 | 7_2:+83657804 | Msa1083370:CDS |
| CTCGGCAGCCCTCTTCAGTC+TGG | 0.408929 | 7_2:-83659294 | None:intergenic |
| AGAAAATGGAGAGTAGGGTT+AGG | 0.414856 | 7_2:-83656923 | None:intergenic |
| CCACTCAGGCCTATTGTTCA+TGG | 0.419917 | 7_2:+83657773 | Msa1083370:CDS |
| AGACAAGAAGTGAAAACTTA+AGG | 0.420622 | 7_2:+83659328 | Msa1083370:exon |
| CTTCTCCCTTGAGGAGTTGA+AGG | 0.436371 | 7_2:+83657838 | Msa1083370:CDS |
| GTCTTGCAATAACTATCATA+AGG | 0.439762 | 7_2:-83659372 | None:intergenic |
| GTAGCATTTGCTAGTTCCTC+AGG | 0.441712 | 7_2:-83659134 | None:intergenic |
| GAAAATGGAGAGTAGGGTTA+GGG | 0.457489 | 7_2:-83656922 | None:intergenic |
| TCTTCAGTCTGGCACCCAAA+TGG | 0.461938 | 7_2:-83659283 | None:intergenic |
| GCTTGCGGAAGTGTTCATTA+GGG | 0.463786 | 7_2:-83657527 | None:intergenic |
| TAAGATTACAAATGAAATGA+AGG | 0.465235 | 7_2:+83659214 | Msa1083370:CDS |
| GTATGGCTATTCAAGTTTGT+TGG | 0.466014 | 7_2:+83659472 | Msa1083370:three_prime_UTR |
| GATGGCTTCTCCCTCACAAT+TGG | 0.470493 | 7_2:-83659179 | None:intergenic |
| GAGGGCTGCCGAGGCAGAGA+AGG | 0.474906 | 7_2:+83659304 | Msa1083370:CDS |
| CTTGTCTTCCTTCTCTGCCT+CGG | 0.482926 | 7_2:-83659312 | None:intergenic |
| GTGGTCCAGCTGTAGGCCTT+GGG | 0.485461 | 7_2:-83657754 | None:intergenic |
| GTGGCAGAAAATGGAGAGTA+GGG | 0.486654 | 7_2:-83656928 | None:intergenic |
| TCTTGCAATAACTATCATAA+GGG | 0.491378 | 7_2:-83659371 | None:intergenic |
| TGTGGCAGAAAATGGAGAGT+AGG | 0.497248 | 7_2:-83656929 | None:intergenic |
| TCGCCGCAAGAACCGATCCT+TGG | 0.500226 | 7_2:+83658877 | Msa1083370:CDS |
| CTTGCAGACCTTCCAAGGAT+CGG | 0.513686 | 7_2:-83658889 | None:intergenic |
| GCAAATGCTACACAGGTTCA+AGG | 0.515568 | 7_2:+83659146 | Msa1083370:CDS |
| TTCTCGTCTTCCTTGCAGGT+TGG | 0.518598 | 7_2:-83657581 | None:intergenic |
| TCGACAGAAATACCAATAGT+TGG | 0.524260 | 7_2:-83658851 | None:intergenic |
| TGTTTACCTTCAACTCCTCA+AGG | 0.536157 | 7_2:-83657844 | None:intergenic |
| GTTGGCTTGCAGACCTTCCA+AGG | 0.544997 | 7_2:-83658894 | None:intergenic |
| CTTCCCAAGACGTGCACGCA+AGG | 0.546682 | 7_2:+83658955 | Msa1083370:CDS |
| ATGAACACTTCCGCAAGCAT+TGG | 0.548841 | 7_2:+83657532 | Msa1083370:CDS |
| ATGAAACTAAGGGCTGGTAA+AGG | 0.560135 | 7_2:+83657815 | Msa1083370:CDS |
| GAAATACAACATGAAACTAA+GGG | 0.563936 | 7_2:+83657805 | Msa1083370:CDS |
| AGGAAGACGAGAAGACGCTT+AGG | 0.564086 | 7_2:+83657591 | Msa1083370:CDS |
| TCTTGGGAAGACGACCAACT+TGG | 0.564678 | 7_2:-83658942 | None:intergenic |
| AAGACGTGCACGCAAGGTCA+AGG | 0.565249 | 7_2:+83658961 | Msa1083370:CDS |
| TACAACATGAAACTAAGGGC+TGG | 0.568361 | 7_2:+83657809 | Msa1083370:CDS |
| TTCATACTTACCAATTGTGA+GGG | 0.574179 | 7_2:+83659169 | Msa1083370:CDS |
| CAGACTGAAGAGGGCTGCCG+AGG | 0.574750 | 7_2:+83659295 | Msa1083370:CDS |
| CGCAAGAACCGATCCTTGGA+AGG | 0.582614 | 7_2:+83658881 | Msa1083370:CDS |
| GTCTGCAAGCCAACGTGCAG+AGG | 0.583501 | 7_2:+83658903 | Msa1083370:CDS |
| CTTCCAAGGATCGGTTCTTG+CGG | 0.585506 | 7_2:-83658880 | None:intergenic |
| TGGTAAAGGCTTCTCCCTTG+AGG | 0.585769 | 7_2:+83657829 | Msa1083370:CDS |
| AGGCCTTGGGAAAATCTTCA+CGG | 0.587332 | 7_2:-83657741 | None:intergenic |
| GTTCATACTTACCAATTGTG+AGG | 0.591073 | 7_2:+83659168 | Msa1083370:CDS |
| ATTTGGGTGCCAGACTGAAG+AGG | 0.592370 | 7_2:+83659285 | Msa1083370:CDS |
| AAATTGCTTAGTTTGAGACA+TGG | 0.594953 | 7_2:+83659424 | Msa1083370:three_prime_UTR |
| GGCTGGTGATTCCACTCCTG+AGG | 0.595885 | 7_2:+83659118 | Msa1083370:intron |
| GAAGACATACAAGGCCAAGT+TGG | 0.599063 | 7_2:+83658928 | Msa1083370:CDS |
| GGCCTACAGCTGGACCACTC+AGG | 0.602263 | 7_2:+83657759 | Msa1083370:CDS |
| ATCTTAACAAGCTCTACAGA+TGG | 0.608105 | 7_2:-83659197 | None:intergenic |
| TTTGGGTGCCAGACTGAAGA+GGG | 0.608247 | 7_2:+83659286 | Msa1083370:CDS |
| GGCAAAACTATGTCAAGACA+TGG | 0.612396 | 7_2:+83657553 | Msa1083370:CDS |
| ATTTGCTAGTTCCTCAGGAG+TGG | 0.614969 | 7_2:-83659129 | None:intergenic |
| CCTACTCGTGAAATCGCCGC+AGG | 0.621744 | 7_2:+83656968 | Msa1083370:five_prime_UTR |
| TGTCTTCAGCCTCTGCACGT+TGG | 0.625495 | 7_2:-83658912 | None:intergenic |
| GTTTACCTTCAACTCCTCAA+GGG | 0.627618 | 7_2:-83657843 | None:intergenic |
| GGCCTGAGTGGTCCAGCTGT+AGG | 0.635974 | 7_2:-83657761 | None:intergenic |
| GGAACTAGCAAATGCTACAC+AGG | 0.641783 | 7_2:+83659139 | Msa1083370:CDS |
| CATGGTTTAACCAACCTGCA+AGG | 0.654567 | 7_2:+83657571 | Msa1083370:CDS |
| CCATGAACAATAGGCCTGAG+TGG | 0.655173 | 7_2:-83657773 | None:intergenic |
| GGAGCAGCTGAAGAGTAATG+TGG | 0.668061 | 7_2:-83656947 | None:intergenic |
| CCTGCGGCGATTTCACGAGT+AGG | 0.671313 | 7_2:-83656968 | None:intergenic |
| GCAGAGGCTGAAGACATACA+AGG | 0.685449 | 7_2:+83658919 | Msa1083370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTATAATAATATCATC+AGG | - | chr7_2:83658154-83658173 | None:intergenic | 10.0% |
| !!! | CAGATTTTTTATTTGTTTTT+GGG | + | chr7_2:83657274-83657293 | Msa1083370:intron | 15.0% |
| !!! | AGATTTTTTATTTGTTTTTG+GGG | + | chr7_2:83657275-83657294 | Msa1083370:intron | 15.0% |
| !! | AAAAAAACAATAAATCAGAA+AGG | - | chr7_2:83657457-83657476 | None:intergenic | 15.0% |
| !!! | TTTCTGATTTATTGTTTTTT+TGG | + | chr7_2:83657456-83657475 | Msa1083370:intron | 15.0% |
| !! | TTTAAGAATATGTAACAAAA+TGG | + | chr7_2:83658066-83658085 | Msa1083370:intron | 15.0% |
| !!! | TTAATTGAGTTTGTTTTTTA+AGG | + | chr7_2:83658341-83658360 | Msa1083370:intron | 15.0% |
| !!! | TTTCTTCTATTTTATAATGT+AGG | + | chr7_2:83658802-83658821 | Msa1083370:intron | 15.0% |
| !!! | GCAGATTTTTTATTTGTTTT+TGG | + | chr7_2:83657273-83657292 | Msa1083370:intron | 20.0% |
| !!! | TTTTTTTGGTTGATATTTGA+AGG | + | chr7_2:83657470-83657489 | Msa1083370:intron | 20.0% |
| !!! | TTTATTGAACGTTTTACTTT+TGG | + | chr7_2:83657901-83657920 | Msa1083370:intron | 20.0% |
| !!! | TTTTTACTTTACCTTTTCAA+TGG | + | chr7_2:83658768-83658787 | Msa1083370:intron | 20.0% |
| !! | TAAGAAATAAACCATTGAAA+AGG | - | chr7_2:83658782-83658801 | None:intergenic | 20.0% |
| !!! | TATGACCTTTTTCTTAATTT+TGG | + | chr7_2:83659015-83659034 | Msa1083370:intron | 20.0% |
| !! | TAAGATTACAAATGAAATGA+AGG | + | chr7_2:83659214-83659233 | Msa1083370:CDS | 20.0% |
| !!! | TTAGCATGTTTTATTTTTCA+TGG | + | chr7_2:83659517-83659536 | Msa1083370:three_prime_UTR | 20.0% |
| !!! | TAGCATGTTTTATTTTTCAT+GGG | + | chr7_2:83659518-83659537 | Msa1083370:three_prime_UTR | 20.0% |
| ! | AATTGATTATGCTGTTGAAT+TGG | + | chr7_2:83657135-83657154 | Msa1083370:intron | 25.0% |
| ! | TGAGAAAGAATGTATATATG+CGG | + | chr7_2:83657189-83657208 | Msa1083370:intron | 25.0% |
| ! | ATAAAAAATCTGCACTATTG+AGG | - | chr7_2:83657266-83657285 | None:intergenic | 25.0% |
| !!! | TCTGATTTATTTGACTTGAT+GGG | + | chr7_2:83657688-83657707 | Msa1083370:intron | 25.0% |
| ! | AGAAATACAACATGAAACTA+AGG | + | chr7_2:83657804-83657823 | Msa1083370:CDS | 25.0% |
| ! | GAAATACAACATGAAACTAA+GGG | + | chr7_2:83657805-83657824 | Msa1083370:CDS | 25.0% |
| ! | AAATTGCAAGTCACTAAAAA+CGG | + | chr7_2:83657964-83657983 | Msa1083370:intron | 25.0% |
| ! | ATAGGTAAAAATACTCCATA+TGG | - | chr7_2:83658304-83658323 | None:intergenic | 25.0% |
| !!! | TATGGAGTATTTTTACCTAT+AGG | + | chr7_2:83658304-83658323 | Msa1083370:intron | 25.0% |
| !!! | AGTATTTTTACCTATAGGAT+TGG | + | chr7_2:83658309-83658328 | Msa1083370:intron | 25.0% |
| ! | AAACTAAAAACTCCTAAAAC+CGG | - | chr7_2:83658436-83658455 | None:intergenic | 25.0% |
| !! | ACAACTAAAGTAGATTTTGA+TGG | - | chr7_2:83658472-83658491 | None:intergenic | 25.0% |
| ! | AAATCTACTTTAGTTGTTAC+AGG | + | chr7_2:83658475-83658494 | Msa1083370:intron | 25.0% |
| !! | AAGAAATCATGGATTATACA+AGG | - | chr7_2:83658552-83658571 | None:intergenic | 25.0% |
| !! | AATATGATTAGTGTTTTCAG+TGG | - | chr7_2:83658585-83658604 | None:intergenic | 25.0% |
| ! | TTCAAATTTATCAGCAATGA+CGG | - | chr7_2:83659043-83659062 | None:intergenic | 25.0% |
| ! | GCATTATTCTTAATTTCTTC+TGG | + | chr7_2:83659077-83659096 | Msa1083370:intron | 25.0% |
| !!! | AAATGAAATGAAGGCATTTA+AGG | + | chr7_2:83659223-83659242 | Msa1083370:CDS | 25.0% |
| ! | TCTTGCAATAACTATCATAA+GGG | - | chr7_2:83659374-83659393 | None:intergenic | 25.0% |
| TCAACAGCATAATCAATTGT+GGG | - | chr7_2:83657133-83657152 | None:intergenic | 30.0% | |
| TTCAACAGCATAATCAATTG+TGG | - | chr7_2:83657134-83657153 | None:intergenic | 30.0% | |
| GCATATATACATTCTTTCTC+AGG | - | chr7_2:83657190-83657209 | None:intergenic | 30.0% | |
| ! | ACTATTGAGGTTTTACGAAT+TGG | - | chr7_2:83657253-83657272 | None:intergenic | 30.0% |
| !!! | TTGTTTTTGGGGAAATGATA+TGG | + | chr7_2:83657286-83657305 | Msa1083370:intron | 30.0% |
| ! | TTGGTTGATATTTGAAGGTA+AGG | + | chr7_2:83657475-83657494 | Msa1083370:intron | 30.0% |
| TTTGAAGGTAAGGTGAAAAA+TGG | + | chr7_2:83657485-83657504 | Msa1083370:intron | 30.0% | |
| !! | CTCTGATTTATTTGACTTGA+TGG | + | chr7_2:83657687-83657706 | Msa1083370:intron | 30.0% |
| TAAAAATACTCCATATGGAC+AGG | - | chr7_2:83658299-83658318 | None:intergenic | 30.0% | |
| !!! | AGTTTGTTTTTTAAGGCCTA+TGG | + | chr7_2:83658348-83658367 | Msa1083370:intron | 30.0% |
| AACTAAAAACTCCTAAAACC+GGG | - | chr7_2:83658435-83658454 | None:intergenic | 30.0% | |
| ! | AAATCATGGATTATACAAGG+AGG | - | chr7_2:83658549-83658568 | None:intergenic | 30.0% |
| GTGTATAAGCAAAGAAATCA+TGG | - | chr7_2:83658563-83658582 | None:intergenic | 30.0% | |
| TCACAACTGAAGAGAATATT+CGG | - | chr7_2:83658630-83658649 | None:intergenic | 30.0% | |
| GACAGAATTGAATATGAAAC+AGG | - | chr7_2:83658653-83658672 | None:intergenic | 30.0% | |
| ! | TATTTTATAATGTAGGCTGC+TGG | + | chr7_2:83658809-83658828 | Msa1083370:intron | 30.0% |
| CGGTACCAAAATTAAGAAAA+AGG | - | chr7_2:83659023-83659042 | None:intergenic | 30.0% | |
| TTCATACTTACCAATTGTGA+GGG | + | chr7_2:83659169-83659188 | Msa1083370:CDS | 30.0% | |
| AGACAAGAAGTGAAAACTTA+AGG | + | chr7_2:83659328-83659347 | Msa1083370:exon | 30.0% | |
| GTCTTGCAATAACTATCATA+AGG | - | chr7_2:83659375-83659394 | None:intergenic | 30.0% | |
| ! | AAATTGCTTAGTTTGAGACA+TGG | + | chr7_2:83659424-83659443 | Msa1083370:three_prime_UTR | 30.0% |
| !!! | TGCTGTTATTTTGTGAAGTA+TGG | + | chr7_2:83659455-83659474 | Msa1083370:three_prime_UTR | 30.0% |
| TGCAGACAAAATTCTTTGAA+GGG | + | chr7_2:83659560-83659579 | Msa1083370:intron | 30.0% | |
| AAGAGTAATGTGGCAGAAAA+TGG | - | chr7_2:83656940-83656959 | None:intergenic | 35.0% | |
| AGTTGTGATTGGAATGTGAA+AGG | - | chr7_2:83657015-83657034 | None:intergenic | 35.0% | |
| ACAGTTCTGTGTAGCAAAAA+GGG | - | chr7_2:83657164-83657183 | None:intergenic | 35.0% | |
| AACAGTTCTGTGTAGCAAAA+AGG | - | chr7_2:83657165-83657184 | None:intergenic | 35.0% | |
| ACACATGGATGGATGATTTA+TGG | - | chr7_2:83657224-83657243 | None:intergenic | 35.0% | |
| AAATCATCCATCCATGTGTT+TGG | + | chr7_2:83657225-83657244 | Msa1083370:intron | 35.0% | |
| ! | TAAGATGAGAAAAGCGGATT+CGG | - | chr7_2:83657363-83657382 | None:intergenic | 35.0% |
| ! | GAGATCTAAGATGAGAAAAG+CGG | - | chr7_2:83657369-83657388 | None:intergenic | 35.0% |
| CAAGCTCTATGTGAAATTAC+AGG | + | chr7_2:83658121-83658140 | Msa1083370:intron | 35.0% | |
| AATTAGCTAGCCAATCCTAT+AGG | - | chr7_2:83658322-83658341 | None:intergenic | 35.0% | |
| AACCCTGACAATCAAGTTAT+AGG | + | chr7_2:83658398-83658417 | Msa1083370:intron | 35.0% | |
| GACCTATAACTTGATTGTCA+GGG | - | chr7_2:83658403-83658422 | None:intergenic | 35.0% | |
| AGACCTATAACTTGATTGTC+AGG | - | chr7_2:83658404-83658423 | None:intergenic | 35.0% | |
| TACTAGATGCACTCAAACTA+AGG | - | chr7_2:83658711-83658730 | None:intergenic | 35.0% | |
| ! | ATAGTTGGAGCAAGCTTTTT+GGG | - | chr7_2:83658839-83658858 | None:intergenic | 35.0% |
| ! | AATAGTTGGAGCAAGCTTTT+TGG | - | chr7_2:83658840-83658859 | None:intergenic | 35.0% |
| ! | AAAAAGCTTGCTCCAACTAT+TGG | + | chr7_2:83658839-83658858 | Msa1083370:CDS | 35.0% |
| TCGACAGAAATACCAATAGT+TGG | - | chr7_2:83658854-83658873 | None:intergenic | 35.0% | |
| CAGCCTGGAAATAAAAAACA+GGG | - | chr7_2:83659103-83659122 | None:intergenic | 35.0% | |
| GTTCATACTTACCAATTGTG+AGG | + | chr7_2:83659168-83659187 | Msa1083370:CDS | 35.0% | |
| ATCTTAACAAGCTCTACAGA+TGG | - | chr7_2:83659200-83659219 | None:intergenic | 35.0% | |
| ! | GTATGGCTATTCAAGTTTGT+TGG | + | chr7_2:83659472-83659491 | Msa1083370:three_prime_UTR | 35.0% |
| !! | TGTTGGTTTAACTAGCATTC+TGG | + | chr7_2:83659489-83659508 | Msa1083370:three_prime_UTR | 35.0% |
| CTGCAGACAAAATTCTTTGA+AGG | + | chr7_2:83659559-83659578 | Msa1083370:intron | 35.0% | |
| ! | GACAAAATTCTTTGAAGGGT+TGG | + | chr7_2:83659564-83659583 | Msa1083370:intron | 35.0% |
| GATTGGAATGTGAAAGGAGA+AGG | - | chr7_2:83657009-83657028 | None:intergenic | 40.0% | |
| CACATTCCAATCACAACTCT+TGG | + | chr7_2:83657017-83657036 | Msa1083370:intron | 40.0% | |
| ! | AAAGCACCAAGAGTTGTGAT+TGG | - | chr7_2:83657026-83657045 | None:intergenic | 40.0% |
| !!! | ACAACTCTTGGTGCTTTTCT+CGG | + | chr7_2:83657029-83657048 | Msa1083370:intron | 40.0% |
| AATCGCAAAATGCTAGCTGA+TGG | + | chr7_2:83657079-83657098 | Msa1083370:intron | 40.0% | |
| !! | CATAGTTTTGCCAATGCTTG+CGG | - | chr7_2:83657545-83657564 | None:intergenic | 40.0% |
| GGCAAAACTATGTCAAGACA+TGG | + | chr7_2:83657553-83657572 | Msa1083370:CDS | 40.0% | |
| ! | ATTTTCAGCTCGTCAGAAGA+AGG | + | chr7_2:83657718-83657737 | Msa1083370:intron | 40.0% |
| TGAGTCTGTCCATGAACAAT+AGG | - | chr7_2:83657785-83657804 | None:intergenic | 40.0% | |
| TACAACATGAAACTAAGGGC+TGG | + | chr7_2:83657809-83657828 | Msa1083370:CDS | 40.0% | |
| ! | ATGAAACTAAGGGCTGGTAA+AGG | + | chr7_2:83657815-83657834 | Msa1083370:CDS | 40.0% |
| GTTTACCTTCAACTCCTCAA+GGG | - | chr7_2:83657846-83657865 | None:intergenic | 40.0% | |
| TGTTTACCTTCAACTCCTCA+AGG | - | chr7_2:83657847-83657866 | None:intergenic | 40.0% | |
| ! | TGTATTGGTGTGGATTGCAA+AGG | - | chr7_2:83658214-83658233 | None:intergenic | 40.0% |
| TTGCAATCCACACCAATACA+TGG | + | chr7_2:83658214-83658233 | Msa1083370:intron | 40.0% | |
| GCAAACGCAATTCCATGTAT+TGG | - | chr7_2:83658229-83658248 | None:intergenic | 40.0% | |
| ACTTGACAACAGGTTTGTAC+TGG | - | chr7_2:83658269-83658288 | None:intergenic | 40.0% | |
| AGTACAAACCTGTTGTCAAG+TGG | + | chr7_2:83658268-83658287 | Msa1083370:intron | 40.0% | |
| AATACTCCATATGGACAGGT+TGG | - | chr7_2:83658295-83658314 | None:intergenic | 40.0% | |
| !!! | TGTTTTTTAAGGCCTATGGC+TGG | + | chr7_2:83658352-83658371 | Msa1083370:intron | 40.0% |
| TGATTGTCAGGGTTCCTAAA+CGG | - | chr7_2:83658392-83658411 | None:intergenic | 40.0% | |
| !! | GTAGATTTTGATGGTCATGC+TGG | - | chr7_2:83658463-83658482 | None:intergenic | 40.0% |
| GGTCAAGGTAATGCAAATTG+CGG | + | chr7_2:83658976-83658995 | Msa1083370:intron | 40.0% | |
| !!! | TGGCCCTGTTTTTTATTTCC+AGG | + | chr7_2:83659097-83659116 | Msa1083370:intron | 40.0% |
| CCAGCCTGGAAATAAAAAAC+AGG | - | chr7_2:83659104-83659123 | None:intergenic | 40.0% | |
| !!! | CCTGTTTTTTATTTCCAGGC+TGG | + | chr7_2:83659101-83659120 | Msa1083370:intron | 40.0% |
| CGAACAAACAAACGCCATTT+GGG | + | chr7_2:83659269-83659288 | Msa1083370:CDS | 40.0% | |
| GTCTGCAGAAAAAGACTTGA+TGG | - | chr7_2:83659547-83659566 | None:intergenic | 40.0% | |
| GTGGCAGAAAATGGAGAGTA+GGG | - | chr7_2:83656931-83656950 | None:intergenic | 45.0% | |
| TGTGGCAGAAAATGGAGAGT+AGG | - | chr7_2:83656932-83656951 | None:intergenic | 45.0% | |
| AAGGAGAAGGTGAGAGAATG+AGG | - | chr7_2:83656996-83657015 | None:intergenic | 45.0% | |
| !!! | CTTGGTGCTTTTCTCGGATT+CGG | + | chr7_2:83657035-83657054 | Msa1083370:intron | 45.0% |
| ! | GCTTTTCTCGGATTCGGATT+CGG | + | chr7_2:83657041-83657060 | Msa1083370:intron | 45.0% |
| TGGCAAAGCTCAACCATTGA+TGG | + | chr7_2:83657099-83657118 | Msa1083370:intron | 45.0% | |
| !! | ATTGGTGCCAAACACATGGA+TGG | - | chr7_2:83657235-83657254 | None:intergenic | 45.0% |
| !! | ACGAATTGGTGCCAAACACA+TGG | - | chr7_2:83657239-83657258 | None:intergenic | 45.0% |
| ATTCATCATAGGGTGACTGC+AGG | + | chr7_2:83657317-83657336 | Msa1083370:intron | 45.0% | |
| ! | GAAAAGCGGATTCGGATTCA+CGG | - | chr7_2:83657355-83657374 | None:intergenic | 45.0% |
| !! | GCTTGCGGAAGTGTTCATTA+GGG | - | chr7_2:83657530-83657549 | None:intergenic | 45.0% |
| !! | TGCTTGCGGAAGTGTTCATT+AGG | - | chr7_2:83657531-83657550 | None:intergenic | 45.0% |
| ATGAACACTTCCGCAAGCAT+TGG | + | chr7_2:83657532-83657551 | Msa1083370:CDS | 45.0% | |
| CATGGTTTAACCAACCTGCA+AGG | + | chr7_2:83657571-83657590 | Msa1083370:CDS | 45.0% | |
| AGGCCTTGGGAAAATCTTCA+CGG | - | chr7_2:83657744-83657763 | None:intergenic | 45.0% | |
| ! | CGCAATTCCATGTATTGGTG+TGG | - | chr7_2:83658224-83658243 | None:intergenic | 45.0% |
| CCTAAACGGCATACGAGTTA+AGG | - | chr7_2:83658378-83658397 | None:intergenic | 45.0% | |
| ! | CCTTAACTCGTATGCCGTTT+AGG | + | chr7_2:83658375-83658394 | Msa1083370:intron | 45.0% |
| AAAACTCCTAAAACCGGGCA+GGG | - | chr7_2:83658430-83658449 | None:intergenic | 45.0% | |
| AAAAACTCCTAAAACCGGGC+AGG | - | chr7_2:83658431-83658450 | None:intergenic | 45.0% | |
| CACCAATCTCCAATGTACGT+AGG | + | chr7_2:83658519-83658538 | Msa1083370:intron | 45.0% | |
| CACCTACGTACATTGGAGAT+TGG | - | chr7_2:83658524-83658543 | None:intergenic | 45.0% | |
| GAAGACATACAAGGCCAAGT+TGG | + | chr7_2:83658928-83658947 | Msa1083370:CDS | 45.0% | |
| ! | ATTTGCTAGTTCCTCAGGAG+TGG | - | chr7_2:83659132-83659151 | None:intergenic | 45.0% |
| ! | GTAGCATTTGCTAGTTCCTC+AGG | - | chr7_2:83659137-83659156 | None:intergenic | 45.0% |
| GGAACTAGCAAATGCTACAC+AGG | + | chr7_2:83659139-83659158 | Msa1083370:CDS | 45.0% | |
| GCAAATGCTACACAGGTTCA+AGG | + | chr7_2:83659146-83659165 | Msa1083370:CDS | 45.0% | |
| GCGAACAAACAAACGCCATT+TGG | + | chr7_2:83659268-83659287 | Msa1083370:CDS | 45.0% | |
| GGAGCAGCTGAAGAGTAATG+TGG | - | chr7_2:83656950-83656969 | None:intergenic | 50.0% | |
| ! | GTGAGAGAATGAGGTACCTG+CGG | - | chr7_2:83656987-83657006 | None:intergenic | 50.0% |
| CGGATTCGGATTCGGATTCA+CGG | + | chr7_2:83657049-83657068 | Msa1083370:intron | 50.0% | |
| !! | TGGAGCGCTGGATTCATCAT+AGG | + | chr7_2:83657306-83657325 | Msa1083370:intron | 50.0% |
| !! | GGAGCGCTGGATTCATCATA+GGG | + | chr7_2:83657307-83657326 | Msa1083370:intron | 50.0% |
| TTCTCGTCTTCCTTGCAGGT+TGG | - | chr7_2:83657584-83657603 | None:intergenic | 50.0% | |
| AGGAAGACGAGAAGACGCTT+AGG | + | chr7_2:83657591-83657610 | Msa1083370:CDS | 50.0% | |
| ! | AGGCCGTGAAGATTTTCCCA+AGG | + | chr7_2:83657738-83657757 | Msa1083370:CDS | 50.0% |
| ! | ATTTTCCCAAGGCCTACAGC+TGG | + | chr7_2:83657749-83657768 | Msa1083370:CDS | 50.0% |
| CCATGAACAATAGGCCTGAG+TGG | - | chr7_2:83657776-83657795 | None:intergenic | 50.0% | |
| CCACTCAGGCCTATTGTTCA+TGG | + | chr7_2:83657773-83657792 | Msa1083370:CDS | 50.0% | |
| TGGTAAAGGCTTCTCCCTTG+AGG | + | chr7_2:83657829-83657848 | Msa1083370:CDS | 50.0% | |
| CTTCTCCCTTGAGGAGTTGA+AGG | + | chr7_2:83657838-83657857 | Msa1083370:CDS | 50.0% | |
| ! | AGGTTGGTCCACTTGACAAC+AGG | - | chr7_2:83658279-83658298 | None:intergenic | 50.0% |
| AGTGGACCAACCTGTCCATA+TGG | + | chr7_2:83658286-83658305 | Msa1083370:intron | 50.0% | |
| TACGAGTTAAGGCCAGCCAT+AGG | - | chr7_2:83658367-83658386 | None:intergenic | 50.0% | |
| TTATAGGTCTATGCCCTGCC+CGG | + | chr7_2:83658414-83658433 | Msa1083370:intron | 50.0% | |
| GGAGGTTCACCTACGTACAT+TGG | - | chr7_2:83658531-83658550 | None:intergenic | 50.0% | |
| ! | CTTCCAAGGATCGGTTCTTG+CGG | - | chr7_2:83658883-83658902 | None:intergenic | 50.0% |
| CTTGCAGACCTTCCAAGGAT+CGG | - | chr7_2:83658892-83658911 | None:intergenic | 50.0% | |
| GCAGAGGCTGAAGACATACA+AGG | + | chr7_2:83658919-83658938 | Msa1083370:CDS | 50.0% | |
| TCTTGGGAAGACGACCAACT+TGG | - | chr7_2:83658945-83658964 | None:intergenic | 50.0% | |
| GATGGCTTCTCCCTCACAAT+TGG | - | chr7_2:83659182-83659201 | None:intergenic | 50.0% | |
| TCTTCAGTCTGGCACCCAAA+TGG | - | chr7_2:83659286-83659305 | None:intergenic | 50.0% | |
| ATTTGGGTGCCAGACTGAAG+AGG | + | chr7_2:83659285-83659304 | Msa1083370:CDS | 50.0% | |
| TTTGGGTGCCAGACTGAAGA+GGG | + | chr7_2:83659286-83659305 | Msa1083370:CDS | 50.0% | |
| CTTGTCTTCCTTCTCTGCCT+CGG | - | chr7_2:83659315-83659334 | None:intergenic | 50.0% | |
| GGGGAAATGATATGGAGCGC+TGG | + | chr7_2:83657294-83657313 | Msa1083370:intron | 55.0% | |
| CGTCTTCTCGTCTTCCTTGC+AGG | - | chr7_2:83657588-83657607 | None:intergenic | 55.0% | |
| ! | TCTATGCCCTGCCCGGTTTT+AGG | + | chr7_2:83658421-83658440 | Msa1083370:intron | 55.0% |
| CGCAAGAACCGATCCTTGGA+AGG | + | chr7_2:83658881-83658900 | Msa1083370:CDS | 55.0% | |
| !! | GTTGGCTTGCAGACCTTCCA+AGG | - | chr7_2:83658897-83658916 | None:intergenic | 55.0% |
| TGTCTTCAGCCTCTGCACGT+TGG | - | chr7_2:83658915-83658934 | None:intergenic | 55.0% | |
| TGACCTTGCGTGCACGTCTT+GGG | - | chr7_2:83658961-83658980 | None:intergenic | 55.0% | |
| TTGACCTTGCGTGCACGTCT+TGG | - | chr7_2:83658962-83658981 | None:intergenic | 55.0% | |
| AAGACGTGCACGCAAGGTCA+AGG | + | chr7_2:83658961-83658980 | Msa1083370:CDS | 55.0% | |
| CCTGCGGCGATTTCACGAGT+AGG | - | chr7_2:83656971-83656990 | None:intergenic | 60.0% | |
| CCTACTCGTGAAATCGCCGC+AGG | + | chr7_2:83656968-83656987 | Msa1083370:five_prime_UTR | 60.0% | |
| ! | GTGGGCACTGCTGCCATCAA+TGG | - | chr7_2:83657115-83657134 | None:intergenic | 60.0% |
| GTGGTCCAGCTGTAGGCCTT+GGG | - | chr7_2:83657757-83657776 | None:intergenic | 60.0% | |
| AGTGGTCCAGCTGTAGGCCT+TGG | - | chr7_2:83657758-83657777 | None:intergenic | 60.0% | |
| TCGCCGCAAGAACCGATCCT+TGG | + | chr7_2:83658877-83658896 | Msa1083370:CDS | 60.0% | |
| GTCTGCAAGCCAACGTGCAG+AGG | + | chr7_2:83658903-83658922 | Msa1083370:CDS | 60.0% | |
| CTTCCCAAGACGTGCACGCA+AGG | + | chr7_2:83658955-83658974 | Msa1083370:CDS | 60.0% | |
| CAGGAGTGGAATCACCAGCC+TGG | - | chr7_2:83659118-83659137 | None:intergenic | 60.0% | |
| GGCTGGTGATTCCACTCCTG+AGG | + | chr7_2:83659118-83659137 | Msa1083370:intron | 60.0% | |
| GGCCTACAGCTGGACCACTC+AGG | + | chr7_2:83657759-83657778 | Msa1083370:CDS | 65.0% | |
| GGCCTGAGTGGTCCAGCTGT+AGG | - | chr7_2:83657764-83657783 | None:intergenic | 65.0% | |
| CTCGGCAGCCCTCTTCAGTC+TGG | - | chr7_2:83659297-83659316 | None:intergenic | 65.0% | |
| CAGACTGAAGAGGGCTGCCG+AGG | + | chr7_2:83659295-83659314 | Msa1083370:CDS | 65.0% | |
| GAGGGCTGCCGAGGCAGAGA+AGG | + | chr7_2:83659304-83659323 | Msa1083370:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 83656925 | 83659657 | 83656925 | ID=Msa1083370;Name=Msa1083370 |
| chr7_2 | mRNA | 83656925 | 83659657 | 83656925 | ID=Msa1083370-mRNA-1;Parent=Msa1083370;Name=Msa1083370-mRNA-1;_AED=0.07;_eAED=0.07;_QI=77|1|1|1|0.6|0.33|6|295|207 |
| chr7_2 | exon | 83656925 | 83656989 | 83656925 | ID=Msa1083370-mRNA-1:exon:21992;Parent=Msa1083370-mRNA-1 |
| chr7_2 | exon | 83657492 | 83657612 | 83657492 | ID=Msa1083370-mRNA-1:exon:21993;Parent=Msa1083370-mRNA-1 |
| chr7_2 | exon | 83657726 | 83657859 | 83657726 | ID=Msa1083370-mRNA-1:exon:21994;Parent=Msa1083370-mRNA-1 |
| chr7_2 | exon | 83658824 | 83658982 | 83658824 | ID=Msa1083370-mRNA-1:exon:21995;Parent=Msa1083370-mRNA-1 |
| chr7_2 | exon | 83659119 | 83659576 | 83659119 | ID=Msa1083370-mRNA-1:exon:21996;Parent=Msa1083370-mRNA-1 |
| chr7_2 | exon | 83659599 | 83659657 | 83659599 | ID=Msa1083370-mRNA-1:exon:21997;Parent=Msa1083370-mRNA-1 |
| chr7_2 | five_prime_UTR | 83656925 | 83656989 | 83656925 | ID=Msa1083370-mRNA-1:five_prime_utr;Parent=Msa1083370-mRNA-1 |
| chr7_2 | five_prime_UTR | 83657492 | 83657503 | 83657492 | ID=Msa1083370-mRNA-1:five_prime_utr;Parent=Msa1083370-mRNA-1 |
| chr7_2 | CDS | 83657504 | 83657612 | 83657504 | ID=Msa1083370-mRNA-1:cds;Parent=Msa1083370-mRNA-1 |
| chr7_2 | CDS | 83657726 | 83657859 | 83657726 | ID=Msa1083370-mRNA-1:cds;Parent=Msa1083370-mRNA-1 |
| chr7_2 | CDS | 83658824 | 83658982 | 83658824 | ID=Msa1083370-mRNA-1:cds;Parent=Msa1083370-mRNA-1 |
| chr7_2 | CDS | 83659119 | 83659340 | 83659119 | ID=Msa1083370-mRNA-1:cds;Parent=Msa1083370-mRNA-1 |
| chr7_2 | three_prime_UTR | 83659341 | 83659576 | 83659341 | ID=Msa1083370-mRNA-1:three_prime_utr;Parent=Msa1083370-mRNA-1 |
| chr7_2 | three_prime_UTR | 83659599 | 83659657 | 83659599 | ID=Msa1083370-mRNA-1:three_prime_utr;Parent=Msa1083370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
