Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426090 | XP_003602417.1 | 99.482 | 193 | 1 | 0 | 1 | 193 | 1 | 193 | 6.32e-135 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426090 | sp|P30707|RL9_PEA | 96.891 | 193 | 6 | 0 | 1 | 193 | 1 | 193 | 1.55e-134 | 377 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426090 | G7J9M6 | 99.482 | 193 | 1 | 0 | 1 | 193 | 1 | 193 | 3.02e-135 | 385 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0426090 | 0.868448 | 6.478801e-66 | -8.615850e-47 |
| Msa0003330 | Msa0426090 | 0.841666 | 4.137480e-58 | -8.615850e-47 |
| Msa0003360 | Msa0426090 | 0.831875 | 1.302505e-55 | -8.615850e-47 |
| Msa0016350 | Msa0426090 | 0.806563 | 7.739701e-50 | -8.615850e-47 |
| Msa0021290 | Msa0426090 | 0.839779 | 1.291563e-57 | -8.615850e-47 |
| Msa0021320 | Msa0426090 | 0.835327 | 1.789665e-56 | -8.615850e-47 |
| Msa0027590 | Msa0426090 | 0.894172 | 3.166932e-75 | -8.615850e-47 |
| Msa0040220 | Msa0426090 | 0.910489 | 1.769095e-82 | -8.615850e-47 |
| Msa0042480 | Msa0426090 | 0.835089 | 2.055174e-56 | -8.615850e-47 |
| Msa0042510 | Msa0426090 | 0.818811 | 1.613331e-52 | -8.615850e-47 |
| Msa0050860 | Msa0426090 | 0.843069 | 1.757386e-58 | -8.615850e-47 |
| Msa0070840 | Msa0426090 | 0.850359 | 1.787130e-60 | -8.615850e-47 |
| Msa0072570 | Msa0426090 | 0.868316 | 7.147431e-66 | -8.615850e-47 |
| Msa0075350 | Msa0426090 | 0.851504 | 8.502921e-61 | -8.615850e-47 |
| Msa0079560 | Msa0426090 | 0.807102 | 5.956303e-50 | -8.615850e-47 |
| Msa0079590 | Msa0426090 | 0.857363 | 1.718063e-62 | -8.615850e-47 |
| Msa0087910 | Msa0426090 | 0.887877 | 9.697371e-73 | -8.615850e-47 |
| Msa0094210 | Msa0426090 | 0.833318 | 5.711914e-56 | -8.615850e-47 |
| Msa0110630 | Msa0426090 | 0.808401 | 3.153359e-50 | -8.615850e-47 |
| Msa0113920 | Msa0426090 | 0.803610 | 3.210610e-49 | -8.615850e-47 |
| Msa0114570 | Msa0426090 | 0.844666 | 6.563279e-59 | -8.615850e-47 |
| Msa0114600 | Msa0426090 | 0.821719 | 3.477174e-53 | -8.615850e-47 |
| Msa0116600 | Msa0426090 | 0.830572 | 2.723886e-55 | -8.615850e-47 |
| Msa0116690 | Msa0426090 | 0.826384 | 2.794152e-54 | -8.615850e-47 |
| Msa0128330 | Msa0426090 | 0.888970 | 3.679006e-73 | -8.615850e-47 |
| Msa0132460 | Msa0426090 | 0.886779 | 2.541777e-72 | -8.615850e-47 |
| Msa0134580 | Msa0426090 | 0.902528 | 8.840722e-79 | -8.615850e-47 |
| Msa0146580 | Msa0426090 | 0.839669 | 1.380252e-57 | -8.615850e-47 |
| Msa0167860 | Msa0426090 | 0.891065 | 5.582367e-74 | -8.615850e-47 |
| Msa0168320 | Msa0426090 | 0.859545 | 3.839937e-63 | -8.615850e-47 |
| Msa0172930 | Msa0426090 | 0.818830 | 1.597469e-52 | -8.615850e-47 |
| Msa0174580 | Msa0426090 | 0.877313 | 6.948874e-69 | -8.615850e-47 |
| Msa0175000 | Msa0426090 | 0.801748 | 7.779338e-49 | -8.615850e-47 |
| Msa0182050 | Msa0426090 | 0.889578 | 2.135953e-73 | -8.615850e-47 |
| Msa0182100 | Msa0426090 | 0.856630 | 2.825830e-62 | -8.615850e-47 |
| Msa0186740 | Msa0426090 | 0.819616 | 1.057981e-52 | -8.615850e-47 |
| Msa0187810 | Msa0426090 | 0.812972 | 3.239483e-51 | -8.615850e-47 |
| Msa0188740 | Msa0426090 | 0.861252 | 1.169085e-63 | -8.615850e-47 |
| Msa0191450 | Msa0426090 | 0.899861 | 1.303087e-77 | -8.615850e-47 |
| Msa0191550 | Msa0426090 | 0.902028 | 1.472523e-78 | -8.615850e-47 |
| Msa0192050 | Msa0426090 | 0.804836 | 1.784314e-49 | -8.615850e-47 |
| Msa0192300 | Msa0426090 | 0.869945 | 2.116571e-66 | -8.615850e-47 |
| Msa0192750 | Msa0426090 | 0.819253 | 1.279913e-52 | -8.615850e-47 |
| Msa0194940 | Msa0426090 | 0.912359 | 2.130991e-83 | -8.615850e-47 |
| Msa0195030 | Msa0426090 | 0.835132 | 2.004694e-56 | -8.615850e-47 |
| Msa0210360 | Msa0426090 | 0.831793 | 1.364529e-55 | -8.615850e-47 |
| Msa0219090 | Msa0426090 | 0.808532 | 2.956799e-50 | -8.615850e-47 |
| Msa0222730 | Msa0426090 | 0.833371 | 5.541103e-56 | -8.615850e-47 |
| Msa0233550 | Msa0426090 | 0.837735 | 4.360785e-57 | -8.615850e-47 |
| Msa0235050 | Msa0426090 | 0.842325 | 2.770794e-58 | -8.615850e-47 |
| Msa0237180 | Msa0426090 | 0.821395 | 4.130554e-53 | -8.615850e-47 |
| Msa0369410 | Msa0426090 | 0.886527 | 3.165992e-72 | -8.615850e-47 |
| Msa0371490 | Msa0426090 | 0.867544 | 1.265483e-65 | -8.615850e-47 |
| Msa0377370 | Msa0426090 | 0.822810 | 1.941411e-53 | -8.615850e-47 |
| Msa0377520 | Msa0426090 | 0.865374 | 6.185081e-65 | -8.615850e-47 |
| Msa0382670 | Msa0426090 | 0.825085 | 5.679892e-54 | -8.615850e-47 |
| Msa0382960 | Msa0426090 | 0.809326 | 2.000034e-50 | -8.615850e-47 |
| Msa0388520 | Msa0426090 | 0.800270 | 1.559110e-48 | -8.615850e-47 |
| Msa0419710 | Msa0426090 | 0.817909 | 2.582091e-52 | -8.615850e-47 |
| Msa0426090 | Msa0426250 | 0.979962 | 3.913888e-149 | -8.615850e-47 |
| Msa0426090 | Msa0432750 | 0.808807 | 2.583217e-50 | -8.615850e-47 |
| Msa0426090 | Msa0438960 | 0.806532 | 7.859016e-50 | -8.615850e-47 |
| Msa0426090 | Msa0450150 | 0.825146 | 5.496115e-54 | -8.615850e-47 |
| Msa0426090 | Msa0463520 | 0.853790 | 1.893459e-61 | -8.615850e-47 |
| Msa0426090 | Msa0472480 | 0.997708 | 1.330153e-247 | -8.615850e-47 |
| Msa0426090 | Msa0475810 | 0.905779 | 2.992798e-80 | -8.615850e-47 |
| Msa0426090 | Msa0479980 | 0.804057 | 2.592492e-49 | -8.615850e-47 |
| Msa0426090 | Msa0481520 | 0.895777 | 6.938623e-76 | -8.615850e-47 |
| Msa0426090 | Msa0482560 | 0.842490 | 2.505317e-58 | -8.615850e-47 |
| Msa0426090 | Msa0485220 | 0.820715 | 5.924420e-53 | -8.615850e-47 |
| Msa0426090 | Msa0511760 | 0.823842 | 1.113901e-53 | -8.615850e-47 |
| Msa0426090 | Msa0517480 | 0.869283 | 3.476034e-66 | -8.615850e-47 |
| Msa0426090 | Msa0529900 | 0.851038 | 1.151334e-60 | -8.615850e-47 |
| Msa0426090 | Msa0540480 | 0.820410 | 6.960293e-53 | -8.615850e-47 |
| Msa0426090 | Msa0547920 | 0.890488 | 9.419153e-74 | -8.615850e-47 |
| Msa0426090 | Msa0550420 | 0.832465 | 9.310951e-56 | -8.615850e-47 |
| Msa0426090 | Msa0573550 | 0.914717 | 1.380707e-84 | -8.615850e-47 |
| Msa0426090 | Msa0574780 | 0.847238 | 1.312292e-59 | -8.615850e-47 |
| Msa0426090 | Msa0578010 | 0.818569 | 1.830650e-52 | -8.615850e-47 |
| Msa0426090 | Msa0579830 | 0.830754 | 2.457342e-55 | -8.615850e-47 |
| Msa0426090 | Msa0582070 | 0.865788 | 4.578236e-65 | -8.615850e-47 |
| Msa0426090 | Msa0591050 | 0.812500 | 4.110105e-51 | -8.615850e-47 |
| Msa0426090 | Msa0596370 | 0.818386 | 2.013716e-52 | -8.615850e-47 |
| Msa0426090 | Msa0597240 | 0.899401 | 2.055961e-77 | -8.615850e-47 |
| Msa0426090 | Msa0602900 | 0.878653 | 2.360367e-69 | -8.615850e-47 |
| Msa0426090 | Msa0605890 | 0.876413 | 1.424046e-68 | -8.615850e-47 |
| Msa0426090 | Msa0619230 | 0.909290 | 6.705966e-82 | -8.615850e-47 |
| Msa0426090 | Msa0621190 | 0.816550 | 5.219642e-52 | -8.615850e-47 |
| Msa0426090 | Msa0622230 | 0.829027 | 6.474544e-55 | -8.615850e-47 |
| Msa0426090 | Msa0643960 | 0.879275 | 1.423539e-69 | -8.615850e-47 |
| Msa0426090 | Msa0648620 | 0.809584 | 1.760428e-50 | -8.615850e-47 |
| Msa0426090 | Msa0648670 | 0.820002 | 8.632060e-53 | -8.615850e-47 |
| Msa0426090 | Msa0649890 | 0.827577 | 1.449153e-54 | -8.615850e-47 |
| Msa0426090 | Msa0653060 | 0.880062 | 7.477877e-70 | -8.615850e-47 |
| Msa0426090 | Msa0656450 | 0.809861 | 1.534793e-50 | -8.615850e-47 |
| Msa0426090 | Msa0681220 | 0.825656 | 4.160875e-54 | -8.615850e-47 |
| Msa0426090 | Msa0686550 | 0.853482 | 2.320569e-61 | -8.615850e-47 |
| Msa0426090 | Msa0694400 | 0.902233 | 1.194629e-78 | -8.615850e-47 |
| Msa0426090 | Msa0704860 | 0.880484 | 5.285760e-70 | -8.615850e-47 |
| Msa0426090 | Msa0705800 | 0.844813 | 5.989756e-59 | -8.615850e-47 |
| Msa0426090 | Msa0708630 | 0.886547 | 3.110917e-72 | -8.615850e-47 |
| Msa0426090 | Msa0717380 | 0.831544 | 1.572019e-55 | -8.615850e-47 |
| Msa0426090 | Msa0718560 | 0.808660 | 2.777512e-50 | -8.615850e-47 |
| Msa0426090 | Msa0741510 | 0.805977 | 1.028699e-49 | -8.615850e-47 |
| Msa0426090 | Msa0748350 | 0.834232 | 3.376942e-56 | -8.615850e-47 |
| Msa0426090 | Msa0758420 | 0.850388 | 1.753990e-60 | -8.615850e-47 |
| Msa0426090 | Msa0788380 | 0.898236 | 6.466134e-77 | -8.615850e-47 |
| Msa0426090 | Msa0790450 | 0.896077 | 5.211937e-76 | -8.615850e-47 |
| Msa0426090 | Msa0796490 | 0.802643 | 5.089610e-49 | -8.615850e-47 |
| Msa0426090 | Msa0799830 | 0.855491 | 6.087581e-62 | -8.615850e-47 |
| Msa0426090 | Msa0822580 | 0.831347 | 1.757202e-55 | -8.615850e-47 |
| Msa0426090 | Msa0834220 | 0.839321 | 1.699330e-57 | -8.615850e-47 |
| Msa0426090 | Msa0835190 | 0.800416 | 1.455898e-48 | -8.615850e-47 |
| Msa0426090 | Msa0838070 | 0.868785 | 5.044517e-66 | -8.615850e-47 |
| Msa0426090 | Msa0861320 | 0.836272 | 1.031390e-56 | -8.615850e-47 |
| Msa0426090 | Msa0880050 | 0.807989 | 3.859398e-50 | -8.615850e-47 |
| Msa0426090 | Msa0902220 | 0.803643 | 3.160777e-49 | -8.615850e-47 |
| Msa0426090 | Msa0927910 | 0.810603 | 1.061907e-50 | -8.615850e-47 |
| Msa0426090 | Msa0929680 | 0.842862 | 1.994979e-58 | -8.615850e-47 |
| Msa0426090 | Msa0929700 | 0.913162 | 8.471710e-84 | -8.615850e-47 |
| Msa0426090 | Msa0930100 | 0.833936 | 4.005555e-56 | -8.615850e-47 |
| Msa0426090 | Msa0930360 | 0.831942 | 1.254002e-55 | -8.615850e-47 |
| Msa0426090 | Msa0930790 | 0.848319 | 6.613517e-60 | -8.615850e-47 |
| Msa0426090 | Msa0930890 | 0.829527 | 4.896223e-55 | -8.615850e-47 |
| Msa0426090 | Msa1019110 | 0.822488 | 2.305831e-53 | -8.615850e-47 |
| Msa0426090 | Msa1025200 | 0.822055 | 2.906309e-53 | -8.615850e-47 |
| Msa0426090 | Msa1025220 | 0.815240 | 1.023291e-51 | -8.615850e-47 |
| Msa0426090 | Msa1037290 | 0.859097 | 5.234668e-63 | -8.615850e-47 |
| Msa0426090 | Msa1040160 | 0.924084 | 1.129637e-89 | -8.615850e-47 |
| Msa0426090 | Msa1041680 | 0.905592 | 3.646108e-80 | -8.615850e-47 |
| Msa0426090 | Msa1042100 | 0.844719 | 6.351409e-59 | -8.615850e-47 |
| Msa0426090 | Msa1047020 | 0.808094 | 3.666636e-50 | -8.615850e-47 |
| Msa0426090 | Msa1050100 | 0.839557 | 1.475278e-57 | -8.615850e-47 |
| Msa0426090 | Msa1054280 | 0.873156 | 1.828469e-67 | -8.615850e-47 |
| Msa0426090 | Msa1058700 | 0.802811 | 4.700152e-49 | -8.615850e-47 |
| Msa0426090 | Msa1078870 | 0.806302 | 8.787911e-50 | -8.615850e-47 |
| Msa0426090 | Msa1078980 | 0.839123 | 1.912314e-57 | -8.615850e-47 |
| Msa0426090 | Msa1079910 | 0.817628 | 2.987817e-52 | -8.615850e-47 |
| Msa0426090 | Msa1082050 | 0.821457 | 3.997256e-53 | -8.615850e-47 |
| Msa0426090 | Msa1082170 | 0.857475 | 1.591788e-62 | -8.615850e-47 |
| Msa0426090 | Msa1083370 | 0.919849 | 2.688302e-87 | -8.615850e-47 |
| Msa0426090 | Msa1089220 | 0.810462 | 1.139091e-50 | -8.615850e-47 |
| Msa0426090 | Msa1096900 | 0.809201 | 2.127015e-50 | -8.615850e-47 |
| Msa0426090 | Msa1116940 | 0.855948 | 4.477742e-62 | -8.615850e-47 |
| Msa0426090 | Msa1124850 | 0.823151 | 1.616420e-53 | -8.615850e-47 |
| Msa0426090 | Msa1124980 | 0.803094 | 4.107226e-49 | -8.615850e-47 |
| Msa0426090 | Msa1126520 | 0.833698 | 4.593921e-56 | -8.615850e-47 |
| Msa0426090 | Msa1126690 | 0.850989 | 1.188639e-60 | -8.615850e-47 |
| Msa0426090 | Msa1131030 | 0.812124 | 4.963578e-51 | -8.615850e-47 |
| Msa0426090 | Msa1136880 | 0.813777 | 2.155973e-51 | -8.615850e-47 |
| Msa0426090 | Msa1156830 | 0.836240 | 1.050572e-56 | -8.615850e-47 |
| Msa0426090 | Msa1164150 | 0.867960 | 9.308641e-66 | -8.615850e-47 |
| Msa0426090 | Msa1165640 | 0.829701 | 4.442089e-55 | -8.615850e-47 |
| Msa0426090 | Msa1166570 | 0.907631 | 4.110838e-81 | -8.615850e-47 |
| Msa0426090 | Msa1167360 | 0.811479 | 6.857284e-51 | -8.615850e-47 |
| Msa0426090 | Msa1167540 | 0.837272 | 5.732777e-57 | -8.615850e-47 |
| Msa0426090 | Msa1167550 | 0.831258 | 1.848472e-55 | -8.615850e-47 |
| Msa0426090 | Msa1169180 | 0.832594 | 8.646344e-56 | -8.615850e-47 |
| Msa0426090 | Msa1180000 | 0.870753 | 1.149624e-66 | -8.615850e-47 |
| Msa0426090 | Msa1186030 | 0.883058 | 6.184155e-71 | -8.615850e-47 |
| Msa0426090 | Msa1203560 | 0.800357 | 1.497277e-48 | -8.615850e-47 |
| Msa0426090 | Msa1206240 | 0.834366 | 3.124051e-56 | -8.615850e-47 |
| Msa0426090 | Msa1213850 | 0.815035 | 1.136215e-51 | -8.615850e-47 |
| Msa0426090 | Msa1218170 | 0.835283 | 1.836134e-56 | -8.615850e-47 |
| Msa0426090 | Msa1227080 | 0.833049 | 6.666423e-56 | -8.615850e-47 |
| Msa0426090 | Msa1235950 | 0.852725 | 3.822289e-61 | -8.615850e-47 |
| Msa0426090 | Msa1235980 | 0.860351 | 2.193978e-63 | -8.615850e-47 |
| Msa0426090 | Msa1237040 | 0.912057 | 3.010862e-83 | -8.615850e-47 |
| Msa0426090 | Msa1240270 | 0.860854 | 1.544927e-63 | -8.615850e-47 |
| Msa0426090 | Msa1255850 | 0.812922 | 3.321767e-51 | -8.615850e-47 |
| Msa0426090 | Msa1258540 | 0.874857 | 4.866743e-68 | -8.615850e-47 |
| Msa0426090 | Msa1270640 | 0.853875 | 1.788961e-61 | -8.615850e-47 |
| Msa0426090 | Msa1270710 | 0.851704 | 7.462130e-61 | -8.615850e-47 |
| Msa0426090 | Msa1278130 | 0.883049 | 6.230298e-71 | -8.615850e-47 |
| Msa0426090 | Msa1284060 | 0.840981 | 6.266374e-58 | -8.615850e-47 |
| Msa0426090 | Msa1311400 | 0.856878 | 2.388533e-62 | -8.615850e-47 |
| Msa0426090 | Msa1316100 | 0.824446 | 8.038568e-54 | -8.615850e-47 |
| Msa0426090 | Msa1317390 | 0.899663 | 1.585900e-77 | -8.615850e-47 |
| Msa0426090 | Msa1332250 | 0.810869 | 9.302733e-51 | -8.615850e-47 |
| Msa0426090 | Msa1333370 | 0.800850 | 1.187884e-48 | -8.615850e-47 |
| Msa0426090 | Msa1341130 | 0.806033 | 1.001027e-49 | -8.615850e-47 |
| Msa0426090 | Msa1341780 | 0.856929 | 2.306311e-62 | -8.615850e-47 |
| Msa0426090 | Msa1351020 | 0.886290 | 3.890042e-72 | -8.615850e-47 |
| Msa0426090 | Msa1351910 | 0.846987 | 1.537179e-59 | -8.615850e-47 |
| Msa0426090 | Msa1358710 | 0.840981 | 6.266374e-58 | -8.615850e-47 |
| Msa0426090 | Msa1363910 | 0.855348 | 6.703054e-62 | -8.615850e-47 |
| Msa0426090 | Msa1364110 | 0.830506 | 2.826277e-55 | -8.615850e-47 |
| Msa0426090 | Msa1367540 | 0.812893 | 3.371813e-51 | -8.615850e-47 |
| Msa0426090 | Msa1368920 | 0.860293 | 2.284311e-63 | -8.615850e-47 |
| Msa0426090 | Msa1371410 | 0.815337 | 9.734493e-52 | -8.615850e-47 |
| Msa0426090 | Msa1385480 | 0.879728 | 9.830242e-70 | -8.615850e-47 |
| Msa0426090 | Msa1387750 | 0.803512 | 3.364811e-49 | -8.615850e-47 |
| Msa0426090 | Msa1390760 | 0.907818 | 3.358785e-81 | -8.615850e-47 |
| Msa0426090 | Msa1402410 | 0.804034 | 2.622370e-49 | -8.615850e-47 |
| Msa0426090 | Msa1403520 | 0.802035 | 6.791388e-49 | -8.615850e-47 |
| Msa0426090 | Msa1403910 | 0.811055 | 8.476984e-51 | -8.615850e-47 |
| Msa0426090 | Msa1407550 | 0.825143 | 5.503654e-54 | -8.615850e-47 |
| Msa0426090 | Msa1410570 | 0.823753 | 1.168960e-53 | -8.615850e-47 |
| Msa0426090 | Msa1413570 | 0.815954 | 7.093128e-52 | -8.615850e-47 |
| Msa0426090 | Msa1415620 | 0.814938 | 1.193926e-51 | -8.615850e-47 |
| Msa0426090 | Msa1418770 | 0.800862 | 1.180870e-48 | -8.615850e-47 |
| Msa0426090 | Msa1423050 | 0.807109 | 5.934403e-50 | -8.615850e-47 |
| Msa0426090 | Msa1424570 | 0.854195 | 1.446664e-61 | -8.615850e-47 |
| Msa0426090 | Msa1425070 | 0.823579 | 1.283780e-53 | -8.615850e-47 |
| Msa0426090 | Msa1426120 | 0.814947 | 1.188562e-51 | -8.615850e-47 |
| Msa0426090 | Msa1432310 | 0.862163 | 6.157962e-64 | -8.615850e-47 |
| Msa0426090 | Msa1446410 | 0.849149 | 3.892942e-60 | -8.615850e-47 |
| Msa0426090 | Msa1449160 | 0.864767 | 9.593264e-65 | -8.615850e-47 |
| Msa0426090 | Msa1450560 | 0.901746 | 1.961350e-78 | -8.615850e-47 |
| Msa0426090 | Msa1453530 | 0.848007 | 8.060129e-60 | -8.615850e-47 |
| Msa0426090 | Msa1463570 | 0.886769 | 2.564228e-72 | -8.615850e-47 |
| Msa0426090 | Msa1465700 | 0.865586 | 5.305012e-65 | -8.615850e-47 |
| Msa0239420 | Msa0426090 | 0.838402 | 2.938543e-57 | -8.615850e-47 |
| Msa0264640 | Msa0426090 | 0.816702 | 4.824910e-52 | -8.615850e-47 |
| Msa0265250 | Msa0426090 | 0.819420 | 1.172225e-52 | -8.615850e-47 |
| Msa0270160 | Msa0426090 | 0.858739 | 6.697393e-63 | -8.615850e-47 |
| Msa0274940 | Msa0426090 | 0.800817 | 1.206312e-48 | -8.615850e-47 |
| Msa0277600 | Msa0426090 | 0.866254 | 3.260226e-65 | -8.615850e-47 |
| Msa0281330 | Msa0426090 | 0.847164 | 1.375340e-59 | -8.615850e-47 |
| Msa0281370 | Msa0426090 | 0.871998 | 4.457670e-67 | -8.615850e-47 |
| Msa0297830 | Msa0426090 | 0.819502 | 1.122903e-52 | -8.615850e-47 |
| Msa0301220 | Msa0426090 | 0.883944 | 2.922240e-71 | -8.615850e-47 |
| Msa0301250 | Msa0426090 | 0.872413 | 3.241311e-67 | -8.615850e-47 |
| Msa0312210 | Msa0426090 | 0.828936 | 6.815217e-55 | -8.615850e-47 |
| Msa0313060 | Msa0426090 | 0.881577 | 2.138201e-70 | -8.615850e-47 |
| Msa0313520 | Msa0426090 | 0.805647 | 1.206755e-49 | -8.615850e-47 |
| Msa0315430 | Msa0426090 | 0.890561 | 8.816802e-74 | -8.615850e-47 |
| Msa0315660 | Msa0426090 | 0.822043 | 2.926124e-53 | -8.615850e-47 |
| Msa0335840 | Msa0426090 | 0.832326 | 1.007653e-55 | -8.615850e-47 |
| Msa0340560 | Msa0426090 | 0.843775 | 1.138880e-58 | -8.615850e-47 |
| Msa0346090 | Msa0426090 | 0.816677 | 4.888998e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426090 | MtrunA17_Chr3g0128201 | 99.482 | 193 | 1 | 0 | 1 | 193 | 1 | 193 | 5.81e-139 | 385 |
| Msa0426090 | MtrunA17_Chr5g0428861 | 87.500 | 192 | 24 | 0 | 1 | 192 | 1 | 192 | 1.08e-126 | 354 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426090 | AT1G33140.1 | 87.113 | 194 | 24 | 1 | 1 | 193 | 1 | 194 | 9.78e-122 | 342 |
| Msa0426090 | AT1G33120.1 | 87.113 | 194 | 24 | 1 | 1 | 193 | 1 | 194 | 9.78e-122 | 342 |
| Msa0426090 | AT4G10450.1 | 84.536 | 194 | 29 | 1 | 1 | 193 | 1 | 194 | 2.63e-120 | 338 |
| Msa0426090 | AT4G10450.2 | 84.337 | 166 | 25 | 1 | 1 | 165 | 1 | 166 | 2.47e-101 | 290 |
Find 69 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGTCTGGTTATTTATTT+TGG | 0.141372 | 3_2:+76502616 | Msa0426090:three_prime_UTR |
| AGCTCAGTTCGTTAAATTAT+TGG | 0.181439 | 3_2:+76502395 | Msa0426090:three_prime_UTR |
| AGATTTATTCCATGCATTTA+AGG | 0.197129 | 3_2:-76502687 | None:intergenic |
| ATTGAGATCCGAAACTTTCT+TGG | 0.238218 | 3_2:+76501485 | Msa0426090:CDS |
| TTAAGGTAACACATGAAATA+TGG | 0.266488 | 3_2:-76502670 | None:intergenic |
| TTACATTTGCTTGTTGAGTT+TGG | 0.269604 | 3_2:+76502276 | Msa0426090:three_prime_UTR |
| GGTGAAGGATGAGGTTGTTT+TGG | 0.319250 | 3_2:+76501921 | Msa0426090:CDS |
| ATGACATTGAGCTTGTTTCT+AGG | 0.326351 | 3_2:+76501950 | Msa0426090:CDS |
| ATTCAAGTTTCTGTTGGTCT+TGG | 0.332651 | 3_2:+76502216 | Msa0426090:three_prime_UTR |
| TCGATGCCTGGTTCGGTTCC+AGG | 0.334604 | 3_2:+76501321 | Msa0426090:CDS |
| GTCAGGGATGTTCATGGTTT+CGG | 0.351741 | 3_2:-76501165 | None:intergenic |
| TCTTCTCTCCAAGAAAGTTT+CGG | 0.365793 | 3_2:-76501493 | None:intergenic |
| TTCTATATGTTTGAAATGAT+AGG | 0.374982 | 3_2:+76502581 | Msa0426090:three_prime_UTR |
| ACCTTGATGCTAACGCCGTC+AGG | 0.384134 | 3_2:-76501182 | None:intergenic |
| CTTCTTCTTGCCTTCTTCAT+CGG | 0.396628 | 3_2:-76501291 | None:intergenic |
| CTCAATCGACTTGTTGTCAT+TGG | 0.397158 | 3_2:-76501468 | None:intergenic |
| GGTATTTATGTTAGTGAGAA+GGG | 0.433044 | 3_2:+76502132 | Msa0426090:CDS |
| AGTTTCTGTTGGTCTTGGAT+TGG | 0.433152 | 3_2:+76502221 | Msa0426090:three_prime_UTR |
| ATTGGTGATGCTAGCGTTGA+TGG | 0.438976 | 3_2:-76501450 | None:intergenic |
| ATGTTAAGAAGAAGGATATC+AGG | 0.444332 | 3_2:+76502097 | Msa0426090:CDS |
| CTCAAGATCGATGCCTGGTT+CGG | 0.447724 | 3_2:+76501314 | Msa0426090:CDS |
| GATATCAGGAAGTTTCTTGA+TGG | 0.450730 | 3_2:+76502111 | Msa0426090:CDS |
| AGGAAAGTAGATTTGCTTGA+TGG | 0.454716 | 3_2:+76501874 | Msa0426090:CDS |
| AGTTTAATTCAAGTTTCTGT+TGG | 0.456312 | 3_2:+76502210 | Msa0426090:three_prime_UTR |
| AGCAGTTCTGATGGCGGCGG+AGG | 0.457127 | 3_2:-76501348 | None:intergenic |
| TCTGTGTTTGCAGCACTCTC+CGG | 0.465365 | 3_2:-76501084 | None:intergenic |
| TGGTTAAATAATGCACTGAA+TGG | 0.480150 | 3_2:+76502470 | Msa0426090:three_prime_UTR |
| GGTGGTAACTGAAGAATAGA+TGG | 0.489244 | 3_2:+76502158 | Msa0426090:exon |
| AACGCCGTCAGGGATGTTCA+TGG | 0.489928 | 3_2:-76501171 | None:intergenic |
| GAAAGCTCAGAGTATGAGTC+TGG | 0.491000 | 3_2:+76502603 | Msa0426090:three_prime_UTR |
| AAACTTTCTTGGAGAGAAGA+AGG | 0.493598 | 3_2:+76501496 | Msa0426090:CDS |
| GATCTCATCACCGATGAAGA+AGG | 0.495068 | 3_2:+76501281 | Msa0426090:CDS |
| GAAATGCCATGTTAAGAAGA+AGG | 0.499506 | 3_2:+76502089 | Msa0426090:intron |
| CCCTGACGGCGTTAGCATCA+AGG | 0.507605 | 3_2:+76501181 | Msa0426090:CDS |
| CATGTGTTACCTTAAATGCA+TGG | 0.524495 | 3_2:+76502678 | Msa0426090:three_prime_UTR |
| TTCAATTGTTCGATCTGAGA+AGG | 0.526562 | 3_2:+76501900 | Msa0426090:CDS |
| TGGAAATCTCACACACTCTA+CGG | 0.531126 | 3_2:-76501111 | None:intergenic |
| TGGTATTTATGTTAGTGAGA+AGG | 0.531892 | 3_2:+76502131 | Msa0426090:CDS |
| TGATATCCTTCTTCTTAACA+TGG | 0.532081 | 3_2:-76502095 | None:intergenic |
| CATGGTTTCGGAGGAGAGGA+TGG | 0.534778 | 3_2:-76501153 | None:intergenic |
| TTGGTGATGCTAGCGTTGAT+GGG | 0.543746 | 3_2:-76501449 | None:intergenic |
| TTATGTTAGTGAGAAGGGAT+CGG | 0.552761 | 3_2:+76502137 | Msa0426090:CDS |
| CACGTTGAGAATCTCATCAC+TGG | 0.554104 | 3_2:+76501377 | Msa0426090:CDS |
| CATCTTGTAGCGGAAACCCT+TGG | 0.556289 | 3_2:-76501405 | None:intergenic |
| AGGGTTTCCGCTACAAGATG+AGG | 0.564650 | 3_2:+76501408 | Msa0426090:CDS |
| ATCTGAGAAGGTGAAGGATG+AGG | 0.567425 | 3_2:+76501912 | Msa0426090:CDS |
| GAGAGCAGTTCTGATGGCGG+CGG | 0.574544 | 3_2:-76501351 | None:intergenic |
| CTCATCACTGGTGTCACCAA+GGG | 0.576975 | 3_2:+76501389 | Msa0426090:CDS |
| GTGGCTGAGAGCAGTTCTGA+TGG | 0.581831 | 3_2:-76501357 | None:intergenic |
| TGTTCATGGTTTCGGAGGAG+AGG | 0.584113 | 3_2:-76501157 | None:intergenic |
| TAGCATCAAGGTTAACGCTA+AGG | 0.586158 | 3_2:+76501193 | Msa0426090:CDS |
| AGAAGCTCAAGATCGATGCC+TGG | 0.588777 | 3_2:+76501309 | Msa0426090:CDS |
| CCTTGATGCTAACGCCGTCA+GGG | 0.590861 | 3_2:-76501181 | None:intergenic |
| TTTACAAATAAAATTGACCA+CGG | 0.594223 | 3_2:-76502646 | None:intergenic |
| TCGAAGTCGAAGGACCTCGC+GGG | 0.613305 | 3_2:+76501219 | Msa0426090:CDS |
| AGGGATGTTCATGGTTTCGG+AGG | 0.621327 | 3_2:-76501162 | None:intergenic |
| TCTCATCACTGGTGTCACCA+AGG | 0.623987 | 3_2:+76501388 | Msa0426090:CDS |
| GTCATGTGCACTTATTAACC+AGG | 0.625933 | 3_2:+76501972 | Msa0426090:CDS |
| TGTTCGATCTGAGAAGGTGA+AGG | 0.628133 | 3_2:+76501906 | Msa0426090:CDS |
| GCTAAGGTCATCGAAGTCGA+AGG | 0.640211 | 3_2:+76501209 | Msa0426090:CDS |
| TGTTAGTGAGAAGGGATCGG+TGG | 0.651106 | 3_2:+76502140 | Msa0426090:CDS |
| ATCGAAGTCGAAGGACCTCG+CGG | 0.660265 | 3_2:+76501218 | Msa0426090:CDS |
| TGGTGATGCTAGCGTTGATG+GGG | 0.676063 | 3_2:-76501448 | None:intergenic |
| GCTGAGAGCAGTTCTGATGG+CGG | 0.677632 | 3_2:-76501354 | None:intergenic |
| CGGTGATGAGATCAAAATCG+AGG | 0.680504 | 3_2:-76501271 | None:intergenic |
| ACACAAACCTCATCTTGTAG+CGG | 0.691692 | 3_2:-76501415 | None:intergenic |
| GAAACCATGAACATCCCTGA+CGG | 0.701649 | 3_2:+76501167 | Msa0426090:CDS |
| CAGTGATGAGATTCTCAACG+TGG | 0.725921 | 3_2:-76501376 | None:intergenic |
| TCACGAACAAGCTTCCCGCG+AGG | 0.748381 | 3_2:-76501233 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATTAGATTAAAACTA+GGG | - | chr3_2:76501634-76501653 | None:intergenic | 10.0% |
| !! | TTATAAATTAGATTAAAACT+AGG | - | chr3_2:76501635-76501654 | None:intergenic | 10.0% |
| !!! | ATGAGTTAATTTTTTTATTT+TGG | + | chr3_2:76501742-76501761 | Msa0426090:intron | 10.0% |
| !! | TATAAATTAGATTAAAACTA+GGG | - | chr3_2:76501634-76501653 | None:intergenic | 10.0% |
| !! | TTATAAATTAGATTAAAACT+AGG | - | chr3_2:76501635-76501654 | None:intergenic | 10.0% |
| !!! | ATGAGTTAATTTTTTTATTT+TGG | + | chr3_2:76501742-76501761 | Msa0426090:intron | 10.0% |
| !!! | TCTTTAATTTCTTCAATTTT+AGG | + | chr3_2:76501551-76501570 | Msa0426090:intron | 15.0% |
| !!! | TATTGTTCTTATATGTTTTA+AGG | + | chr3_2:76502344-76502363 | Msa0426090:three_prime_UTR | 15.0% |
| !!! | TCTTTAATTTCTTCAATTTT+AGG | + | chr3_2:76501551-76501570 | Msa0426090:intron | 15.0% |
| !!! | TATTGTTCTTATATGTTTTA+AGG | + | chr3_2:76502344-76502363 | Msa0426090:three_prime_UTR | 15.0% |
| !! | GAGATAATGTCTAATTTATT+TGG | + | chr3_2:76501776-76501795 | Msa0426090:intron | 20.0% |
| !!! | TTTGGAATTTTTGGTTATTT+TGG | + | chr3_2:76502294-76502313 | Msa0426090:three_prime_UTR | 20.0% |
| !!! | TTCTATATGTTTGAAATGAT+AGG | + | chr3_2:76502581-76502600 | Msa0426090:three_prime_UTR | 20.0% |
| !! | TTTACAAATAAAATTGACCA+CGG | - | chr3_2:76502649-76502668 | None:intergenic | 20.0% |
| !! | GAGATAATGTCTAATTTATT+TGG | + | chr3_2:76501776-76501795 | Msa0426090:intron | 20.0% |
| !!! | TTTGGAATTTTTGGTTATTT+TGG | + | chr3_2:76502294-76502313 | Msa0426090:three_prime_UTR | 20.0% |
| !!! | TTCTATATGTTTGAAATGAT+AGG | + | chr3_2:76502581-76502600 | Msa0426090:three_prime_UTR | 20.0% |
| !! | TTTACAAATAAAATTGACCA+CGG | - | chr3_2:76502649-76502668 | None:intergenic | 20.0% |
| ! | CACAAATTAAAGTGAAACTA+AGG | - | chr3_2:76501585-76501604 | None:intergenic | 25.0% |
| ! | GTCTAATTTATTTGGTTATC+TGG | + | chr3_2:76501784-76501803 | Msa0426090:intron | 25.0% |
| ! | GAATCGAATAATGTTGTATT+AGG | + | chr3_2:76501849-76501868 | Msa0426090:intron | 25.0% |
| ! | ACAAAAATAAAGCATGTTCA+TGG | - | chr3_2:76502016-76502035 | None:intergenic | 25.0% |
| !! | AGTTTAATTCAAGTTTCTGT+TGG | + | chr3_2:76502210-76502229 | Msa0426090:three_prime_UTR | 25.0% |
| !!! | GTTATTTTGGTTTTCTCTAT+TGG | + | chr3_2:76502307-76502326 | Msa0426090:three_prime_UTR | 25.0% |
| !! | GTTTTCATTGAATTATTCAG+TGG | + | chr3_2:76502450-76502469 | Msa0426090:three_prime_UTR | 25.0% |
| !! | ATGAGTCTGGTTATTTATTT+TGG | + | chr3_2:76502616-76502635 | Msa0426090:three_prime_UTR | 25.0% |
| ! | TTAAGGTAACACATGAAATA+TGG | - | chr3_2:76502673-76502692 | None:intergenic | 25.0% |
| ! | AGATTTATTCCATGCATTTA+AGG | - | chr3_2:76502690-76502709 | None:intergenic | 25.0% |
| ! | CACAAATTAAAGTGAAACTA+AGG | - | chr3_2:76501585-76501604 | None:intergenic | 25.0% |
| ! | GTCTAATTTATTTGGTTATC+TGG | + | chr3_2:76501784-76501803 | Msa0426090:intron | 25.0% |
| ! | GAATCGAATAATGTTGTATT+AGG | + | chr3_2:76501849-76501868 | Msa0426090:intron | 25.0% |
| ! | ACAAAAATAAAGCATGTTCA+TGG | - | chr3_2:76502016-76502035 | None:intergenic | 25.0% |
| !! | AGTTTAATTCAAGTTTCTGT+TGG | + | chr3_2:76502210-76502229 | Msa0426090:three_prime_UTR | 25.0% |
| !!! | GTTATTTTGGTTTTCTCTAT+TGG | + | chr3_2:76502307-76502326 | Msa0426090:three_prime_UTR | 25.0% |
| !! | GTTTTCATTGAATTATTCAG+TGG | + | chr3_2:76502450-76502469 | Msa0426090:three_prime_UTR | 25.0% |
| !! | ATGAGTCTGGTTATTTATTT+TGG | + | chr3_2:76502616-76502635 | Msa0426090:three_prime_UTR | 25.0% |
| ! | TTAAGGTAACACATGAAATA+TGG | - | chr3_2:76502673-76502692 | None:intergenic | 25.0% |
| ! | AGATTTATTCCATGCATTTA+AGG | - | chr3_2:76502690-76502709 | None:intergenic | 25.0% |
| !!! | GTCTTCATTTTTTGATACTG+TGG | - | chr3_2:76501134-76501153 | None:intergenic | 30.0% |
| ! | TTTACTAGTTTGTGAATCTG+TGG | + | chr3_2:76501822-76501841 | Msa0426090:intron | 30.0% |
| GAATAATGTTGTATTAGGTG+AGG | + | chr3_2:76501854-76501873 | Msa0426090:intron | 30.0% | |
| TGATATCCTTCTTCTTAACA+TGG | - | chr3_2:76502098-76502117 | None:intergenic | 30.0% | |
| ATGTTAAGAAGAAGGATATC+AGG | + | chr3_2:76502097-76502116 | Msa0426090:CDS | 30.0% | |
| TGGTATTTATGTTAGTGAGA+AGG | + | chr3_2:76502131-76502150 | Msa0426090:CDS | 30.0% | |
| GGTATTTATGTTAGTGAGAA+GGG | + | chr3_2:76502132-76502151 | Msa0426090:CDS | 30.0% | |
| ! | TTACATTTGCTTGTTGAGTT+TGG | + | chr3_2:76502276-76502295 | Msa0426090:three_prime_UTR | 30.0% |
| !! | CTTGTTGAGTTTGGAATTTT+TGG | + | chr3_2:76502285-76502304 | Msa0426090:three_prime_UTR | 30.0% |
| AGCTCAGTTCGTTAAATTAT+TGG | + | chr3_2:76502395-76502414 | Msa0426090:three_prime_UTR | 30.0% | |
| TGGTTAAATAATGCACTGAA+TGG | + | chr3_2:76502470-76502489 | Msa0426090:three_prime_UTR | 30.0% | |
| !!! | GTCTTCATTTTTTGATACTG+TGG | - | chr3_2:76501134-76501153 | None:intergenic | 30.0% |
| ! | TTTACTAGTTTGTGAATCTG+TGG | + | chr3_2:76501822-76501841 | Msa0426090:intron | 30.0% |
| GAATAATGTTGTATTAGGTG+AGG | + | chr3_2:76501854-76501873 | Msa0426090:intron | 30.0% | |
| TGATATCCTTCTTCTTAACA+TGG | - | chr3_2:76502098-76502117 | None:intergenic | 30.0% | |
| ATGTTAAGAAGAAGGATATC+AGG | + | chr3_2:76502097-76502116 | Msa0426090:CDS | 30.0% | |
| TGGTATTTATGTTAGTGAGA+AGG | + | chr3_2:76502131-76502150 | Msa0426090:CDS | 30.0% | |
| GGTATTTATGTTAGTGAGAA+GGG | + | chr3_2:76502132-76502151 | Msa0426090:CDS | 30.0% | |
| ! | TTACATTTGCTTGTTGAGTT+TGG | + | chr3_2:76502276-76502295 | Msa0426090:three_prime_UTR | 30.0% |
| !! | CTTGTTGAGTTTGGAATTTT+TGG | + | chr3_2:76502285-76502304 | Msa0426090:three_prime_UTR | 30.0% |
| AGCTCAGTTCGTTAAATTAT+TGG | + | chr3_2:76502395-76502414 | Msa0426090:three_prime_UTR | 30.0% | |
| TGGTTAAATAATGCACTGAA+TGG | + | chr3_2:76502470-76502489 | Msa0426090:three_prime_UTR | 30.0% | |
| ATTGAGATCCGAAACTTTCT+TGG | + | chr3_2:76501485-76501504 | Msa0426090:CDS | 35.0% | |
| TCTTCTCTCCAAGAAAGTTT+CGG | - | chr3_2:76501496-76501515 | None:intergenic | 35.0% | |
| AAACTTTCTTGGAGAGAAGA+AGG | + | chr3_2:76501496-76501515 | Msa0426090:CDS | 35.0% | |
| ! | AGGAAAGTAGATTTGCTTGA+TGG | + | chr3_2:76501874-76501893 | Msa0426090:CDS | 35.0% |
| TTCAATTGTTCGATCTGAGA+AGG | + | chr3_2:76501900-76501919 | Msa0426090:CDS | 35.0% | |
| ! | ATGACATTGAGCTTGTTTCT+AGG | + | chr3_2:76501950-76501969 | Msa0426090:CDS | 35.0% |
| ATGTTCATGGACCATGTTAA+GGG | - | chr3_2:76502003-76502022 | None:intergenic | 35.0% | |
| !! | GAATGTTGTTGTTGCGTTTT+TGG | + | chr3_2:76502062-76502081 | Msa0426090:intron | 35.0% |
| GAAATGCCATGTTAAGAAGA+AGG | + | chr3_2:76502089-76502108 | Msa0426090:intron | 35.0% | |
| GATATCAGGAAGTTTCTTGA+TGG | + | chr3_2:76502111-76502130 | Msa0426090:CDS | 35.0% | |
| TTATGTTAGTGAGAAGGGAT+CGG | + | chr3_2:76502137-76502156 | Msa0426090:CDS | 35.0% | |
| ! | ATTCAAGTTTCTGTTGGTCT+TGG | + | chr3_2:76502216-76502235 | Msa0426090:three_prime_UTR | 35.0% |
| !!! | TTGGATTGGTTACTGTTTTC+TGG | + | chr3_2:76502235-76502254 | Msa0426090:three_prime_UTR | 35.0% |
| !!! | TTTATTTTGGACGTATTCCG+TGG | + | chr3_2:76502629-76502648 | Msa0426090:three_prime_UTR | 35.0% |
| CATGTGTTACCTTAAATGCA+TGG | + | chr3_2:76502678-76502697 | Msa0426090:three_prime_UTR | 35.0% | |
| ATTGAGATCCGAAACTTTCT+TGG | + | chr3_2:76501485-76501504 | Msa0426090:CDS | 35.0% | |
| TCTTCTCTCCAAGAAAGTTT+CGG | - | chr3_2:76501496-76501515 | None:intergenic | 35.0% | |
| AAACTTTCTTGGAGAGAAGA+AGG | + | chr3_2:76501496-76501515 | Msa0426090:CDS | 35.0% | |
| ! | AGGAAAGTAGATTTGCTTGA+TGG | + | chr3_2:76501874-76501893 | Msa0426090:CDS | 35.0% |
| TTCAATTGTTCGATCTGAGA+AGG | + | chr3_2:76501900-76501919 | Msa0426090:CDS | 35.0% | |
| ! | ATGACATTGAGCTTGTTTCT+AGG | + | chr3_2:76501950-76501969 | Msa0426090:CDS | 35.0% |
| ATGTTCATGGACCATGTTAA+GGG | - | chr3_2:76502003-76502022 | None:intergenic | 35.0% | |
| !! | GAATGTTGTTGTTGCGTTTT+TGG | + | chr3_2:76502062-76502081 | Msa0426090:intron | 35.0% |
| GAAATGCCATGTTAAGAAGA+AGG | + | chr3_2:76502089-76502108 | Msa0426090:intron | 35.0% | |
| GATATCAGGAAGTTTCTTGA+TGG | + | chr3_2:76502111-76502130 | Msa0426090:CDS | 35.0% | |
| TTATGTTAGTGAGAAGGGAT+CGG | + | chr3_2:76502137-76502156 | Msa0426090:CDS | 35.0% | |
| ! | ATTCAAGTTTCTGTTGGTCT+TGG | + | chr3_2:76502216-76502235 | Msa0426090:three_prime_UTR | 35.0% |
| !!! | TTGGATTGGTTACTGTTTTC+TGG | + | chr3_2:76502235-76502254 | Msa0426090:three_prime_UTR | 35.0% |
| !!! | TTTATTTTGGACGTATTCCG+TGG | + | chr3_2:76502629-76502648 | Msa0426090:three_prime_UTR | 35.0% |
| CATGTGTTACCTTAAATGCA+TGG | + | chr3_2:76502678-76502697 | Msa0426090:three_prime_UTR | 35.0% | |
| TGGAAATCTCACACACTCTA+CGG | - | chr3_2:76501114-76501133 | None:intergenic | 40.0% | |
| TAGCATCAAGGTTAACGCTA+AGG | + | chr3_2:76501193-76501212 | Msa0426090:CDS | 40.0% | |
| CTTCTTCTTGCCTTCTTCAT+CGG | - | chr3_2:76501294-76501313 | None:intergenic | 40.0% | |
| ACACAAACCTCATCTTGTAG+CGG | - | chr3_2:76501418-76501437 | None:intergenic | 40.0% | |
| !! | CTCAATCGACTTGTTGTCAT+TGG | - | chr3_2:76501471-76501490 | None:intergenic | 40.0% |
| !!! | AAGGATGAGGTTGTTTTGGA+TGG | + | chr3_2:76501925-76501944 | Msa0426090:CDS | 40.0% |
| GTCATGTGCACTTATTAACC+AGG | + | chr3_2:76501972-76501991 | Msa0426090:CDS | 40.0% | |
| TGTTCATGGACCATGTTAAG+GGG | - | chr3_2:76502002-76502021 | None:intergenic | 40.0% | |
| CATGTTCATGGACCATGTTA+AGG | - | chr3_2:76502004-76502023 | None:intergenic | 40.0% | |
| GGTGGTAACTGAAGAATAGA+TGG | + | chr3_2:76502158-76502177 | Msa0426090:exon | 40.0% | |
| !! | AGTTTCTGTTGGTCTTGGAT+TGG | + | chr3_2:76502221-76502240 | Msa0426090:three_prime_UTR | 40.0% |
| TGGAAATCTCACACACTCTA+CGG | - | chr3_2:76501114-76501133 | None:intergenic | 40.0% | |
| TAGCATCAAGGTTAACGCTA+AGG | + | chr3_2:76501193-76501212 | Msa0426090:CDS | 40.0% | |
| CTTCTTCTTGCCTTCTTCAT+CGG | - | chr3_2:76501294-76501313 | None:intergenic | 40.0% | |
| ACACAAACCTCATCTTGTAG+CGG | - | chr3_2:76501418-76501437 | None:intergenic | 40.0% | |
| !! | CTCAATCGACTTGTTGTCAT+TGG | - | chr3_2:76501471-76501490 | None:intergenic | 40.0% |
| !!! | AAGGATGAGGTTGTTTTGGA+TGG | + | chr3_2:76501925-76501944 | Msa0426090:CDS | 40.0% |
| GTCATGTGCACTTATTAACC+AGG | + | chr3_2:76501972-76501991 | Msa0426090:CDS | 40.0% | |
| TGTTCATGGACCATGTTAAG+GGG | - | chr3_2:76502002-76502021 | None:intergenic | 40.0% | |
| CATGTTCATGGACCATGTTA+AGG | - | chr3_2:76502004-76502023 | None:intergenic | 40.0% | |
| GGTGGTAACTGAAGAATAGA+TGG | + | chr3_2:76502158-76502177 | Msa0426090:exon | 40.0% | |
| !! | AGTTTCTGTTGGTCTTGGAT+TGG | + | chr3_2:76502221-76502240 | Msa0426090:three_prime_UTR | 40.0% |
| GTCAGGGATGTTCATGGTTT+CGG | - | chr3_2:76501168-76501187 | None:intergenic | 45.0% | |
| GAAACCATGAACATCCCTGA+CGG | + | chr3_2:76501167-76501186 | Msa0426090:CDS | 45.0% | |
| CGGTGATGAGATCAAAATCG+AGG | - | chr3_2:76501274-76501293 | None:intergenic | 45.0% | |
| GATCTCATCACCGATGAAGA+AGG | + | chr3_2:76501281-76501300 | Msa0426090:CDS | 45.0% | |
| CAGTGATGAGATTCTCAACG+TGG | - | chr3_2:76501379-76501398 | None:intergenic | 45.0% | |
| CACGTTGAGAATCTCATCAC+TGG | + | chr3_2:76501377-76501396 | Msa0426090:CDS | 45.0% | |
| !! | TTGGTGATGCTAGCGTTGAT+GGG | - | chr3_2:76501452-76501471 | None:intergenic | 45.0% |
| !! | ATTGGTGATGCTAGCGTTGA+TGG | - | chr3_2:76501453-76501472 | None:intergenic | 45.0% |
| TGTTCGATCTGAGAAGGTGA+AGG | + | chr3_2:76501906-76501925 | Msa0426090:CDS | 45.0% | |
| ATCTGAGAAGGTGAAGGATG+AGG | + | chr3_2:76501912-76501931 | Msa0426090:CDS | 45.0% | |
| ! | GGTGAAGGATGAGGTTGTTT+TGG | + | chr3_2:76501921-76501940 | Msa0426090:CDS | 45.0% |
| GAAAGCTCAGAGTATGAGTC+TGG | + | chr3_2:76502603-76502622 | Msa0426090:three_prime_UTR | 45.0% | |
| GTCAGGGATGTTCATGGTTT+CGG | - | chr3_2:76501168-76501187 | None:intergenic | 45.0% | |
| GAAACCATGAACATCCCTGA+CGG | + | chr3_2:76501167-76501186 | Msa0426090:CDS | 45.0% | |
| CGGTGATGAGATCAAAATCG+AGG | - | chr3_2:76501274-76501293 | None:intergenic | 45.0% | |
| GATCTCATCACCGATGAAGA+AGG | + | chr3_2:76501281-76501300 | Msa0426090:CDS | 45.0% | |
| CAGTGATGAGATTCTCAACG+TGG | - | chr3_2:76501379-76501398 | None:intergenic | 45.0% | |
| CACGTTGAGAATCTCATCAC+TGG | + | chr3_2:76501377-76501396 | Msa0426090:CDS | 45.0% | |
| !! | TTGGTGATGCTAGCGTTGAT+GGG | - | chr3_2:76501452-76501471 | None:intergenic | 45.0% |
| !! | ATTGGTGATGCTAGCGTTGA+TGG | - | chr3_2:76501453-76501472 | None:intergenic | 45.0% |
| TGTTCGATCTGAGAAGGTGA+AGG | + | chr3_2:76501906-76501925 | Msa0426090:CDS | 45.0% | |
| ATCTGAGAAGGTGAAGGATG+AGG | + | chr3_2:76501912-76501931 | Msa0426090:CDS | 45.0% | |
| ! | GGTGAAGGATGAGGTTGTTT+TGG | + | chr3_2:76501921-76501940 | Msa0426090:CDS | 45.0% |
| GAAAGCTCAGAGTATGAGTC+TGG | + | chr3_2:76502603-76502622 | Msa0426090:three_prime_UTR | 45.0% | |
| TCTGTGTTTGCAGCACTCTC+CGG | - | chr3_2:76501087-76501106 | None:intergenic | 50.0% | |
| TGTTCATGGTTTCGGAGGAG+AGG | - | chr3_2:76501160-76501179 | None:intergenic | 50.0% | |
| AGGGATGTTCATGGTTTCGG+AGG | - | chr3_2:76501165-76501184 | None:intergenic | 50.0% | |
| GCTAAGGTCATCGAAGTCGA+AGG | + | chr3_2:76501209-76501228 | Msa0426090:CDS | 50.0% | |
| AGAAGCTCAAGATCGATGCC+TGG | + | chr3_2:76501309-76501328 | Msa0426090:CDS | 50.0% | |
| CTCAAGATCGATGCCTGGTT+CGG | + | chr3_2:76501314-76501333 | Msa0426090:CDS | 50.0% | |
| !! | TCTCATCACTGGTGTCACCA+AGG | + | chr3_2:76501388-76501407 | Msa0426090:CDS | 50.0% |
| !! | CTCATCACTGGTGTCACCAA+GGG | + | chr3_2:76501389-76501408 | Msa0426090:CDS | 50.0% |
| ! | CATCTTGTAGCGGAAACCCT+TGG | - | chr3_2:76501408-76501427 | None:intergenic | 50.0% |
| AGGGTTTCCGCTACAAGATG+AGG | + | chr3_2:76501408-76501427 | Msa0426090:CDS | 50.0% | |
| !! | TGGTGATGCTAGCGTTGATG+GGG | - | chr3_2:76501451-76501470 | None:intergenic | 50.0% |
| ACCAGGTACACCCCTTAACA+TGG | + | chr3_2:76501989-76502008 | Msa0426090:intron | 50.0% | |
| ! | ACCATGTTAAGGGGTGTACC+TGG | - | chr3_2:76501993-76502012 | None:intergenic | 50.0% |
| TGTTAGTGAGAAGGGATCGG+TGG | + | chr3_2:76502140-76502159 | Msa0426090:CDS | 50.0% | |
| TCTGTGTTTGCAGCACTCTC+CGG | - | chr3_2:76501087-76501106 | None:intergenic | 50.0% | |
| TGTTCATGGTTTCGGAGGAG+AGG | - | chr3_2:76501160-76501179 | None:intergenic | 50.0% | |
| AGGGATGTTCATGGTTTCGG+AGG | - | chr3_2:76501165-76501184 | None:intergenic | 50.0% | |
| GCTAAGGTCATCGAAGTCGA+AGG | + | chr3_2:76501209-76501228 | Msa0426090:CDS | 50.0% | |
| AGAAGCTCAAGATCGATGCC+TGG | + | chr3_2:76501309-76501328 | Msa0426090:CDS | 50.0% | |
| CTCAAGATCGATGCCTGGTT+CGG | + | chr3_2:76501314-76501333 | Msa0426090:CDS | 50.0% | |
| !! | TCTCATCACTGGTGTCACCA+AGG | + | chr3_2:76501388-76501407 | Msa0426090:CDS | 50.0% |
| !! | CTCATCACTGGTGTCACCAA+GGG | + | chr3_2:76501389-76501408 | Msa0426090:CDS | 50.0% |
| ! | CATCTTGTAGCGGAAACCCT+TGG | - | chr3_2:76501408-76501427 | None:intergenic | 50.0% |
| AGGGTTTCCGCTACAAGATG+AGG | + | chr3_2:76501408-76501427 | Msa0426090:CDS | 50.0% | |
| !! | TGGTGATGCTAGCGTTGATG+GGG | - | chr3_2:76501451-76501470 | None:intergenic | 50.0% |
| ACCAGGTACACCCCTTAACA+TGG | + | chr3_2:76501989-76502008 | Msa0426090:intron | 50.0% | |
| ! | ACCATGTTAAGGGGTGTACC+TGG | - | chr3_2:76501993-76502012 | None:intergenic | 50.0% |
| TGTTAGTGAGAAGGGATCGG+TGG | + | chr3_2:76502140-76502159 | Msa0426090:CDS | 50.0% | |
| CATGGTTTCGGAGGAGAGGA+TGG | - | chr3_2:76501156-76501175 | None:intergenic | 55.0% | |
| AACGCCGTCAGGGATGTTCA+TGG | - | chr3_2:76501174-76501193 | None:intergenic | 55.0% | |
| CCTTGATGCTAACGCCGTCA+GGG | - | chr3_2:76501184-76501203 | None:intergenic | 55.0% | |
| ACCTTGATGCTAACGCCGTC+AGG | - | chr3_2:76501185-76501204 | None:intergenic | 55.0% | |
| ATCGAAGTCGAAGGACCTCG+CGG | + | chr3_2:76501218-76501237 | Msa0426090:CDS | 55.0% | |
| ! | GGTTTTCCTGGAACCGAACC+AGG | - | chr3_2:76501330-76501349 | None:intergenic | 55.0% |
| ! | GCTGAGAGCAGTTCTGATGG+CGG | - | chr3_2:76501357-76501376 | None:intergenic | 55.0% |
| ! | GTGGCTGAGAGCAGTTCTGA+TGG | - | chr3_2:76501360-76501379 | None:intergenic | 55.0% |
| CATGGTTTCGGAGGAGAGGA+TGG | - | chr3_2:76501156-76501175 | None:intergenic | 55.0% | |
| AACGCCGTCAGGGATGTTCA+TGG | - | chr3_2:76501174-76501193 | None:intergenic | 55.0% | |
| CCTTGATGCTAACGCCGTCA+GGG | - | chr3_2:76501184-76501203 | None:intergenic | 55.0% | |
| ACCTTGATGCTAACGCCGTC+AGG | - | chr3_2:76501185-76501204 | None:intergenic | 55.0% | |
| ATCGAAGTCGAAGGACCTCG+CGG | + | chr3_2:76501218-76501237 | Msa0426090:CDS | 55.0% | |
| ! | GGTTTTCCTGGAACCGAACC+AGG | - | chr3_2:76501330-76501349 | None:intergenic | 55.0% |
| ! | GCTGAGAGCAGTTCTGATGG+CGG | - | chr3_2:76501357-76501376 | None:intergenic | 55.0% |
| ! | GTGGCTGAGAGCAGTTCTGA+TGG | - | chr3_2:76501360-76501379 | None:intergenic | 55.0% |
| CCCTGACGGCGTTAGCATCA+AGG | + | chr3_2:76501181-76501200 | Msa0426090:CDS | 60.0% | |
| TCGAAGTCGAAGGACCTCGC+GGG | + | chr3_2:76501219-76501238 | Msa0426090:CDS | 60.0% | |
| TCACGAACAAGCTTCCCGCG+AGG | - | chr3_2:76501236-76501255 | None:intergenic | 60.0% | |
| !! | TCGATGCCTGGTTCGGTTCC+AGG | + | chr3_2:76501321-76501340 | Msa0426090:CDS | 60.0% |
| !! | GAGAGCAGTTCTGATGGCGG+CGG | - | chr3_2:76501354-76501373 | None:intergenic | 60.0% |
| CCCTGACGGCGTTAGCATCA+AGG | + | chr3_2:76501181-76501200 | Msa0426090:CDS | 60.0% | |
| TCGAAGTCGAAGGACCTCGC+GGG | + | chr3_2:76501219-76501238 | Msa0426090:CDS | 60.0% | |
| TCACGAACAAGCTTCCCGCG+AGG | - | chr3_2:76501236-76501255 | None:intergenic | 60.0% | |
| !! | TCGATGCCTGGTTCGGTTCC+AGG | + | chr3_2:76501321-76501340 | Msa0426090:CDS | 60.0% |
| !! | GAGAGCAGTTCTGATGGCGG+CGG | - | chr3_2:76501354-76501373 | None:intergenic | 60.0% |
| !! | GATGGCGGCGGAGGTTTTCC+TGG | - | chr3_2:76501342-76501361 | None:intergenic | 65.0% |
| !! | AGCAGTTCTGATGGCGGCGG+AGG | - | chr3_2:76501351-76501370 | None:intergenic | 65.0% |
| !! | GATGGCGGCGGAGGTTTTCC+TGG | - | chr3_2:76501342-76501361 | None:intergenic | 65.0% |
| !! | AGCAGTTCTGATGGCGGCGG+AGG | - | chr3_2:76501351-76501370 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 76501084 | 76502727 | 76501084 | ID=Msa0426090;Name=Msa0426090 |
| chr3_2 | mRNA | 76501084 | 76502727 | 76501084 | ID=Msa0426090-mRNA-1;Parent=Msa0426090;Name=Msa0426090-mRNA-1;_AED=0.04;_eAED=0.04;_QI=62|1|1|1|1|1|3|551|193 |
| chr3_2 | exon | 76501084 | 76501517 | 76501084 | ID=Msa0426090-mRNA-1:exon:19744;Parent=Msa0426090-mRNA-1 |
| chr3_2 | exon | 76501871 | 76501993 | 76501871 | ID=Msa0426090-mRNA-1:exon:19745;Parent=Msa0426090-mRNA-1 |
| chr3_2 | exon | 76502090 | 76502727 | 76502090 | ID=Msa0426090-mRNA-1:exon:19746;Parent=Msa0426090-mRNA-1 |
| chr3_2 | five_prime_UTR | 76501084 | 76501145 | 76501084 | ID=Msa0426090-mRNA-1:five_prime_utr;Parent=Msa0426090-mRNA-1 |
| chr3_2 | CDS | 76501146 | 76501517 | 76501146 | ID=Msa0426090-mRNA-1:cds;Parent=Msa0426090-mRNA-1 |
| chr3_2 | CDS | 76501871 | 76501993 | 76501871 | ID=Msa0426090-mRNA-1:cds;Parent=Msa0426090-mRNA-1 |
| chr3_2 | CDS | 76502090 | 76502176 | 76502090 | ID=Msa0426090-mRNA-1:cds;Parent=Msa0426090-mRNA-1 |
| chr3_2 | three_prime_UTR | 76502177 | 76502727 | 76502177 | ID=Msa0426090-mRNA-1:three_prime_utr;Parent=Msa0426090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
