AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1249370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1249370 MtrunA17_Chr8g0364961 99.416 856 5 0 1 856 1 856 0.0 1766
Msa1249370 MtrunA17_Chr1g0209251 66.627 845 274 2 1 839 1 843 0.0 1191
Msa1249370 MtrunA17_Chr4g0041381 63.466 854 297 3 1 841 1 852 0.0 1150
Msa1249370 MtrunA17_Chr8g0391971 65.258 852 280 7 1 839 1 849 0.0 1149
Msa1249370 MtrunA17_Chr1g0161531 63.934 854 292 6 1 840 1 852 0.0 1131
Msa1249370 MtrunA17_Chr4g0073041 62.247 792 289 5 52 839 55 840 0.0 1036
Msa1249370 MtrunA17_Chr3g0117891 60.053 751 299 1 77 827 3 752 0.0 926
Msa1249370 MtrunA17_Chr3g0107401 54.348 598 243 3 56 653 2 569 0.0 625
Msa1249370 MtrunA17_Chr2g0314621 34.252 762 426 21 52 787 122 834 5.76e-134 423
Msa1249370 MtrunA17_Chr8g0359371 34.165 802 434 23 52 814 83 829 4.23e-132 417
Msa1249370 MtrunA17_Chr8g0380051 37.500 352 186 8 36 374 53 383 2.63e-67 231
Msa1249370 MtrunA17_Chr3g0107421 54.857 175 79 0 246 420 1 175 1.70e-57 194
Msa1249370 MtrunA17_Chr3g0116901 51.955 179 72 4 8 186 6 170 5.98e-52 179
Msa1249370 MtrunA17_Chr8g0380061 30.892 437 248 13 381 800 5 404 2.45e-50 185
Msa1249370 MtrunA17_Chr3g0107411 53.741 147 68 0 437 583 1 147 9.37e-48 167
Msa1249370 MtrunA17_Chr3g0107431 47.458 118 47 2 50 167 7 109 2.45e-28 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1249370 AT1G23870.1 74.510 867 209 3 1 855 1 867 0.0 1370
Msa1249370 AT1G70290.1 72.992 859 225 3 1 855 1 856 0.0 1338
Msa1249370 AT1G60140.6 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1249370 AT1G60140.1 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1249370 AT1G60140.2 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1249370 AT1G60140.5 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1249370 AT1G60140.4 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1249370 AT1G70290.2 68.685 859 224 4 1 855 1 818 0.0 1241
Msa1249370 AT1G60140.3 73.580 757 194 1 1 751 1 757 0.0 1195
Msa1249370 AT4G17770.1 64.852 845 289 2 1 838 1 844 0.0 1177
Msa1249370 AT4G17770.2 64.852 845 289 2 1 838 1 844 0.0 1177
Msa1249370 AT1G68020.2 64.019 856 291 4 1 839 1 856 0.0 1156
Msa1249370 AT1G68020.3 64.019 856 291 4 1 839 1 856 0.0 1156
Msa1249370 AT1G06410.3 63.077 845 296 4 1 837 1 837 0.0 1126
Msa1249370 AT1G06410.1 63.077 845 296 4 1 837 1 837 0.0 1126
Msa1249370 AT1G06410.2 63.077 845 296 4 1 837 1 837 0.0 1126
Msa1249370 AT2G18700.1 60.327 857 326 6 1 851 1 849 0.0 1080
Msa1249370 AT1G68020.1 63.476 679 231 4 1 662 1 679 0.0 915
Msa1249370 AT1G16980.1 35.688 807 458 24 48 834 7 772 7.25e-146 451
Msa1249370 AT4G27550.2 33.052 829 469 22 51 838 2 785 2.45e-133 417
Msa1249370 AT4G27550.1 32.931 829 477 22 52 838 3 794 1.29e-132 416
Msa1249370 AT1G78580.4 33.805 778 432 20 52 800 91 814 2.78e-132 419
Msa1249370 AT1G78580.1 33.805 778 432 20 52 800 91 814 2.78e-132 419
Msa1249370 AT1G78580.2 33.805 778 432 20 52 800 91 814 2.78e-132 419
Msa1249370 AT1G78580.3 33.805 778 432 20 52 800 91 814 2.78e-132 419
Msa1249370 AT1G16980.2 35.266 638 362 18 48 675 7 603 1.46e-118 374

Find 240 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGTGGATCAGATTCTTTC+TGG 0.076554 8_2:-44024790 Msa1249370:three_prime_UTR
ACAACTTCACCCTGCAAATT+TGG 0.106547 8_2:+44026573 None:intergenic
ACATGTATAGTTACATTATT+TGG 0.165580 8_2:-44024576 Msa1249370:three_prime_UTR
TGGGGAATTGGTCTGGGCTT+GGG 0.169334 8_2:-44025994 Msa1249370:CDS
CTGGGGAATTGGTCTGGGCT+TGG 0.187166 8_2:-44025995 Msa1249370:CDS
CAAGATGCAGACCCTGATTT+TGG 0.207528 8_2:-44025438 Msa1249370:CDS
AAGAGGATCAATGAAATTTA+TGG 0.210673 8_2:-44026471 Msa1249370:CDS
ACTATACATGTTTGAAATTT+CGG 0.241341 8_2:+44024588 None:intergenic
ACATCAATTGTTATATTTAC+TGG 0.255436 8_2:-44024684 Msa1249370:three_prime_UTR
CCAAGGGTTATGACTGTTCC+TGG 0.261011 8_2:-44027563 Msa1249370:CDS
GGGGAATTGGTCTGGGCTTG+GGG 0.266295 8_2:-44025993 Msa1249370:CDS
ATAAATCCTGCAAGGGGTTC+AGG 0.270561 8_2:-44026537 Msa1249370:CDS
TTACATACATAATTCTATTA+TGG 0.271576 8_2:-44024553 Msa1249370:three_prime_UTR
TTGAGAATTTCATCCCTTAC+TGG 0.274615 8_2:+44026936 None:intergenic
CTCTAAGCTAAAAGAGATTC+AGG 0.278734 8_2:-44026700 Msa1249370:CDS
CTTCTCTGAGTGGGGCCATC+AGG 0.282889 8_2:-44026206 Msa1249370:CDS
GATGCCATGCAAACCGATTC+AGG 0.283524 8_2:+44024764 None:intergenic
AAAGATAAGAAAGTTATTCT+TGG 0.285155 8_2:-44026669 Msa1249370:CDS
CTGGAATTGGGCAAGATGTT+TGG 0.285774 8_2:+44024944 None:intergenic
GAATCAGATGTTAGTTCTTC+TGG 0.292836 8_2:-44027518 Msa1249370:CDS
GCAAAGATCATTATACTAAA+AGG 0.294692 8_2:-44026020 Msa1249370:CDS
CAAGTGGTCCAGCAATTCTT+TGG 0.301605 8_2:+44025404 None:intergenic
ACCCTAGACAAAAGCTTATT+AGG 0.311946 8_2:+44024481 None:intergenic
ATAACCCTTGGAAGACTTCT+TGG 0.323153 8_2:+44027575 None:intergenic
TGAGAAGGTTCTCTTGAATA+TGG 0.324266 8_2:-44025198 Msa1249370:CDS
TACTCATGATGTGGCATATT+GGG 0.324520 8_2:-44026076 Msa1249370:CDS
TCCCATCATCTGAAATTTAC+CGG 0.324934 8_2:-44026965 Msa1249370:CDS
CAGCAATTCTTTGGCTTGGC+AGG 0.325831 8_2:+44025413 None:intergenic
CAACTTCACCCTGCAAATTT+GGG 0.326749 8_2:+44026574 None:intergenic
CACGAAATCTGGTGGATTAC+CGG 0.327222 8_2:+44025169 None:intergenic
TCCTTCCCTGAACCCCTTGC+AGG 0.330095 8_2:+44026531 None:intergenic
AATATTGTGTTCATTGTTAG+TGG 0.330780 8_2:-44025778 Msa1249370:CDS
TTTAGTATAATGATCTTTGC+AGG 0.332751 8_2:+44026023 None:intergenic
GCTTGGCAGGAGCCAAAATC+AGG 0.332771 8_2:+44025426 None:intergenic
GTGTGGATCAGATTCTTTCT+GGG 0.339981 8_2:-44024789 Msa1249370:three_prime_UTR
ACTAAAAGGTGCTGGGGAAT+TGG 0.344491 8_2:-44026006 Msa1249370:CDS
TCTCAAAAGAAACCTGGAAT+TGG 0.347950 8_2:+44024931 None:intergenic
AAGGTGCTGGGGAATTGGTC+TGG 0.348234 8_2:-44026001 Msa1249370:CDS
TGGAATTGGGCAAGATGTTT+GGG 0.350397 8_2:+44024945 None:intergenic
CTTGTTGTGTCTGAGTTCAT+TGG 0.350593 8_2:-44026237 Msa1249370:CDS
GAGATATTGATACTGCTAAA+TGG 0.353153 8_2:-44027442 Msa1249370:CDS
CCAATGCACATCACGAAATC+TGG 0.354845 8_2:+44025158 None:intergenic
CGATTTCATCGAGTTAAACT+TGG 0.356832 8_2:-44027008 Msa1249370:CDS
GGGTTCAGGGAAGGATGTTC+AGG 0.357166 8_2:-44026523 Msa1249370:CDS
TTGTTGAATTCGGATTTAAT+TGG 0.359446 8_2:-44026909 Msa1249370:CDS
ATTTGTTTGCGGATCTTGAT+TGG 0.360978 8_2:-44025554 Msa1249370:CDS
TTAAGCACAGATATGACTTC+AGG 0.363121 8_2:+44025823 None:intergenic
GGGATTATTTCTGACCTTGA+TGG 0.367224 8_2:-44027542 Msa1249370:CDS
CTGCCAAGCCAAAGAATTGC+TGG 0.368870 8_2:-44025412 Msa1249370:CDS
TCTCAAAGGATTGTTGAATT+CGG 0.369451 8_2:-44026919 Msa1249370:CDS
CATACAAAAGAACTAGTAGA+AGG 0.371718 8_2:-44025909 Msa1249370:CDS
TTCTTTCTGGGCTCCTGAAT+CGG 0.378445 8_2:-44024777 Msa1249370:three_prime_UTR
ATAAGCACTCTTCTCGAAAC+GGG 0.382221 8_2:+44026404 None:intergenic
TTTAGCTTAGAGGATGTAGA+AGG 0.386302 8_2:+44026711 None:intergenic
AGCATATGGGTAGCATATAA+TGG 0.386638 8_2:+44027189 None:intergenic
CAAACATCTTGCCCAATTCC+AGG 0.387739 8_2:-44024943 Msa1249370:CDS
GGGCCATCAGGGTCAATCCC+TGG 0.389275 8_2:-44026194 Msa1249370:CDS
ATAAATTTCATTGATCCTCT+TGG 0.390480 8_2:+44026473 None:intergenic
TAACCCTTGGAAGACTTCTT+GGG 0.392932 8_2:+44027576 None:intergenic
TATGAATTTAGCCCTCAGTA+TGG 0.393080 8_2:-44026148 Msa1249370:CDS
ATTCTATTACAATTAAAAGA+TGG 0.393081 8_2:-44027395 Msa1249370:CDS
TAACGGCGACGGCGAGATTC+CGG 0.394430 8_2:+44029529 None:intergenic
GCAGCAGAACCCAAATTTGC+AGG 0.398626 8_2:-44026583 Msa1249370:CDS
GATGTTGTAAAGTTGCTTGA+TGG 0.401203 8_2:-44024993 Msa1249370:CDS
CTGCAAACAATATATTTGTA+TGG 0.405626 8_2:+44026324 None:intergenic
GAATCTAAGCGCGGACATAT+AGG 0.407020 8_2:-44026819 Msa1249370:CDS
CTTCTCAGCTACCAAACCTT+TGG 0.411552 8_2:+44025214 None:intergenic
GCCATCTTTCTTGATTATGA+TGG 0.412733 8_2:-44025886 Msa1249370:CDS
ATCATTATACTAAAAGGTGC+TGG 0.413565 8_2:-44026014 Msa1249370:CDS
GGCAGGCCAAACAGCATTGT+TGG 0.415116 8_2:-44024895 Msa1249370:three_prime_UTR
GTTGTTCACCTTCTCTGAGT+GGG 0.416077 8_2:-44026215 Msa1249370:CDS
TTCTATTACAATTAAAAGAT+GGG 0.419809 8_2:-44027394 Msa1249370:CDS
GTCCGGTAAATTTCAGATGA+TGG 0.420016 8_2:+44026963 None:intergenic
ATCACCATGATCTGAGCATA+TGG 0.421283 8_2:+44027175 None:intergenic
CTCAAAAGAAACCTGGAATT+GGG 0.424009 8_2:+44024932 None:intergenic
TGAAATTGCTCAGAGATTAC+TGG 0.424931 8_2:-44027303 Msa1249370:CDS
GTACTCATGATGTGGCATAT+TGG 0.429323 8_2:-44026077 Msa1249370:CDS
CAAGAGATTCTCTGAATGAA+TGG 0.436703 8_2:-44025750 Msa1249370:CDS
CAATATATTTGTATGGGACT+AGG 0.441769 8_2:+44026331 None:intergenic
CTGCTAAATGGTGTTTCAGT+TGG 0.444648 8_2:-44027430 Msa1249370:CDS
CAAATATATTGTTTGCAGAC+AGG 0.445837 8_2:-44026319 Msa1249370:CDS
CTTTGACCGAGTGCTTTGGC+AGG 0.445978 8_2:-44027150 Msa1249370:CDS
TTTACCGGACTTTGCCAGTA+AGG 0.446014 8_2:-44026950 Msa1249370:CDS
CAGACAGGGAACTGCAAAGC+TGG 0.446931 8_2:-44026304 Msa1249370:CDS
ATGTTAGTTCTTCTGGATGT+CGG 0.447873 8_2:-44027511 Msa1249370:CDS
CTGCAGGTCATGGGGTAGAA+AGG 0.448467 8_2:+44027259 None:intergenic
GAATCGGTTTGCATGGCATC+AGG 0.449527 8_2:-44024761 Msa1249370:three_prime_UTR
GGTGGAATAGCGACTCTGAA+TGG 0.451271 8_2:-44025587 Msa1249370:CDS
ATCGCTTTGACCGAGTGCTT+TGG 0.451315 8_2:-44027154 Msa1249370:CDS
TGCGGATCTTGATTGGAAAC+AGG 0.453319 8_2:-44025547 Msa1249370:CDS
CATATAGGACTTGATTACTT+TGG 0.456053 8_2:-44026804 Msa1249370:CDS
AACGAACCAACAATGCTGTT+TGG 0.456508 8_2:+44024889 None:intergenic
ACAGGGAGTAACCAAAGGTT+TGG 0.457006 8_2:-44025225 Msa1249370:intron
GTTTACATCATGCAAACTGC+TGG 0.460290 8_2:-44025728 Msa1249370:CDS
CCAGATTTCGTGATGTGCAT+TGG 0.463267 8_2:-44025158 Msa1249370:CDS
GGCAAACATGTTGCCGCTGC+AGG 0.463803 8_2:-44027471 Msa1249370:CDS
CAATTGAACTGAGATAGAAT+TGG 0.465116 8_2:-44024420 Msa1249370:three_prime_UTR
TGAAGTCAAGGAAAGTGCTT+TGG 0.467204 8_2:-44025472 Msa1249370:CDS
TAAATCCTGCAAGGGGTTCA+GGG 0.467451 8_2:-44026536 Msa1249370:CDS
CACAGATATGACTTCAGGGC+TGG 0.467927 8_2:+44025828 None:intergenic
TTCTTAAGTGTAAAGGTGTA+AGG 0.470117 8_2:+44024376 None:intergenic
TGTTAGTTCTTCTGGATGTC+GGG 0.472937 8_2:-44027510 Msa1249370:CDS
CAAAGGTTTGGTAGCTGAGA+AGG 0.472991 8_2:-44025213 Msa1249370:CDS
AGGTGCTGGGGAATTGGTCT+GGG 0.473831 8_2:-44026000 Msa1249370:CDS
CTGTGCTCTCAAAAGAAACC+TGG 0.476062 8_2:+44024925 None:intergenic
AGAGTTATTTCACTTTCTCA+TGG 0.477242 8_2:-44025967 Msa1249370:CDS
CTGCAGTAGAATGCTAGGTC+TGG 0.477809 8_2:-44026847 Msa1249370:CDS
GTTGCATCGTCAATGCTGTA+AGG 0.478965 8_2:-44026365 Msa1249370:CDS
AGTACAAGCAACGATCAATC+AGG 0.478979 8_2:+44024623 None:intergenic
TTCTCTGAGTGGGGCCATCA+GGG 0.481545 8_2:-44026205 Msa1249370:CDS
ATGAATTTAGCCCTCAGTAT+GGG 0.482655 8_2:-44026147 Msa1249370:CDS
CAAGGGTTATGACTGTTCCT+GGG 0.488044 8_2:-44027562 Msa1249370:CDS
CAAAGAATTGCTGGACCACT+TGG 0.490557 8_2:-44025403 Msa1249370:CDS
TCTTGCTGCAGTAGAATGCT+AGG 0.494534 8_2:-44026852 Msa1249370:CDS
TTGTGTTCATTGTTAGTGGA+AGG 0.496110 8_2:-44025774 Msa1249370:CDS
AGCAACTGCATCTATATCCC+AGG 0.496254 8_2:+44026176 None:intergenic
GTTGAAGTTCTTAAGTGTAA+AGG 0.497670 8_2:+44024369 None:intergenic
GAGAGCACAGTTTCTTAGGC+AGG 0.499109 8_2:-44024912 Msa1249370:exon
TCCGGTAAATTTCAGATGAT+GGG 0.500703 8_2:+44026964 None:intergenic
TCAAATTATAAATCCTGCAA+GGG 0.500735 8_2:-44026544 Msa1249370:CDS
TCTGTATACGACTGCATGAC+AGG 0.500792 8_2:+44025516 None:intergenic
GGTCCAGCAATTCTTTGGCT+TGG 0.501011 8_2:+44025409 None:intergenic
GGCTCCTGAATCGGTTTGCA+TGG 0.501103 8_2:-44024768 Msa1249370:three_prime_UTR
ACCCAAACAAAATCATCATC+GGG 0.501271 8_2:+44027074 None:intergenic
TGCTAAATGGTGTTTCAGTT+GGG 0.502656 8_2:-44027429 Msa1249370:CDS
CATCCCTTACTGGCAAAGTC+CGG 0.504874 8_2:+44026946 None:intergenic
GACGAATAGTGCGACTTTGT+TGG 0.507006 8_2:-44024811 Msa1249370:three_prime_UTR
CTCTTGAATATGGTTAATGC+CGG 0.507275 8_2:-44025188 Msa1249370:CDS
GCCGTCGCCGTTACCGTCGC+CGG 0.507426 8_2:-44029519 Msa1249370:intron
AATAAGCACTCTTCTCGAAA+CGG 0.515130 8_2:+44026403 None:intergenic
CTACCCATATGCTCAGATCA+TGG 0.515637 8_2:-44027179 Msa1249370:CDS
AACCCAAACAAAATCATCAT+CGG 0.516929 8_2:+44027073 None:intergenic
GAACCAGCAATTGTTAAAAG+AGG 0.517681 8_2:-44025363 Msa1249370:CDS
ACAAAGTCGCACTATTCGTC+AGG 0.518446 8_2:+44024814 None:intergenic
ACAGATATGACTTCAGGGCT+GGG 0.520588 8_2:+44025829 None:intergenic
GTGGAATAGCGACTCTGAAT+GGG 0.520863 8_2:-44025586 Msa1249370:CDS
AAATATATTGTTTGCAGACA+GGG 0.522683 8_2:-44026318 Msa1249370:CDS
ATGGTGTTTCAGTTGGGATG+AGG 0.523696 8_2:-44027423 Msa1249370:CDS
TAAGCACAGATATGACTTCA+GGG 0.524391 8_2:+44025824 None:intergenic
GGCCATCAGGGTCAATCCCT+GGG 0.525071 8_2:-44026193 Msa1249370:CDS
GAAGGTTGACGTGTGGTTCG+TGG 0.526824 8_2:-44024739 Msa1249370:three_prime_UTR
GTTCTTCTGGATGTCGGGAG+CGG 0.526826 8_2:-44027505 Msa1249370:CDS
TCATTATACTAAAAGGTGCT+GGG 0.528112 8_2:-44026013 Msa1249370:CDS
TGCTGATACAATATGGTCAA+TGG 0.528241 8_2:+44025930 None:intergenic
GGAAACAAGTCATTTGTTTG+CGG 0.528499 8_2:-44025565 Msa1249370:CDS
TTCAAATTATAAATCCTGCA+AGG 0.529329 8_2:-44026545 Msa1249370:CDS
ATCGTCAATGCTGTAAGGGA+TGG 0.532615 8_2:-44026360 Msa1249370:CDS
TGGATCTAATATTGAAGTCA+AGG 0.535654 8_2:-44025484 Msa1249370:CDS
CATTGTTGGTTCGTTATGCG+AGG 0.536774 8_2:-44024881 Msa1249370:three_prime_UTR
TGAGATAGATGCTAGTGAGC+AGG 0.537498 8_2:-44027327 Msa1249370:CDS
CCAGGAACAGTCATAACCCT+TGG 0.540553 8_2:+44027563 None:intergenic
GCTTAACTTCAACAATATGC+TGG 0.541548 8_2:+44025340 None:intergenic
CAATCTGAAATTTCTAGCTG+TGG 0.541729 8_2:-44026616 Msa1249370:CDS
GAACTTACCGGCGACGGTAA+CGG 0.543690 8_2:+44029512 None:intergenic
GCCATCATAATCAAGAAAGA+TGG 0.544414 8_2:+44025885 None:intergenic
TTGTTCACCTTCTCTGAGTG+GGG 0.546280 8_2:-44026214 Msa1249370:CDS
TGTGTTCATTGTTAGTGGAA+GGG 0.547481 8_2:-44025773 Msa1249370:CDS
TATTGTTGAAGTTAAGCCAC+AGG 0.548984 8_2:-44025334 Msa1249370:intron
CAGATATGACTTCAGGGCTG+GGG 0.549497 8_2:+44025830 None:intergenic
CTGGGACTTGCAGCTGAACA+TGG 0.550416 8_2:-44025709 Msa1249370:CDS
AATCGTTTCCTCAAGAAAGT+AGG 0.550967 8_2:+44027026 None:intergenic
TAAGAAAGTTATTCTTGGTG+TGG 0.551636 8_2:-44026664 Msa1249370:CDS
TGAATTTAGCCCTCAGTATG+GGG 0.553092 8_2:-44026146 Msa1249370:CDS
TGCAAACAATATATTTGTAT+GGG 0.553617 8_2:+44026325 None:intergenic
GGAAGACTTCTTGGGGTGTG+AGG 0.553746 8_2:+44027584 None:intergenic
TGCAAAGCTGGATGAAGCTG+TGG 0.555064 8_2:-44026292 Msa1249370:CDS
ACTGGTGCTTCATTGAGCAT+CGG 0.556417 8_2:-44024666 Msa1249370:three_prime_UTR
CACTACGCGTTTCACCTCAC+CGG 0.557659 8_2:-44029548 Msa1249370:five_prime_UTR
AGCATCTATCTCAACCTTGA+GGG 0.558399 8_2:+44027337 None:intergenic
TTACCGGACTTTGCCAGTAA+GGG 0.558832 8_2:-44026949 Msa1249370:CDS
CATAAGCCTGCCAAAGCACT+CGG 0.561670 8_2:+44027144 None:intergenic
TGATACTGAGGTAATCTATG+TGG 0.564061 8_2:-44027363 Msa1249370:CDS
TCACCATGATCTGAGCATAT+GGG 0.565672 8_2:+44027176 None:intergenic
ACCGGCGACGGTAACGGCGA+CGG 0.567252 8_2:+44029518 None:intergenic
GAGCGGTCAATGATAATGAC+TGG 0.567271 8_2:+44026432 None:intergenic
TCAAGGTCAGAAATAATCCC+AGG 0.567364 8_2:+44027545 None:intergenic
TCCTGCAAGGGGTTCAGGGA+AGG 0.568476 8_2:-44026532 Msa1249370:CDS
GGTTGTTCACCTTCTCTGAG+TGG 0.569153 8_2:-44026216 Msa1249370:CDS
GATTTCATCGAGTTAAACTT+GGG 0.570858 8_2:-44027007 Msa1249370:CDS
CAGGATTTATAATTTGAACA+AGG 0.572858 8_2:+44026550 None:intergenic
AATATTTGCAGACAAAGTCA+TGG 0.573166 8_2:-44027108 Msa1249370:CDS
GATACTGAGGTAATCTATGT+GGG 0.575365 8_2:-44027362 Msa1249370:CDS
TATTCTTGGTGTGGACGACA+TGG 0.577773 8_2:-44026655 Msa1249370:CDS
AGATATGACTTCAGGGCTGG+GGG 0.578681 8_2:+44025831 None:intergenic
AATCTATGTGGGTTCCCTCA+AGG 0.580394 8_2:-44027351 Msa1249370:CDS
CATATCGATAGTGTTTCTCA+TGG 0.584215 8_2:+44026103 None:intergenic
TCTTTACAGGGAGTAACCAA+AGG 0.585367 8_2:-44025230 Msa1249370:intron
TTTGATTTGTTGAGGTAGCG+AGG 0.586241 8_2:+44024970 None:intergenic
CGGTAGGAATTCACATGGGT+AGG 0.588120 8_2:-44026755 Msa1249370:CDS
ATCCCAGGGATTGACCCTGA+TGG 0.588505 8_2:+44026191 None:intergenic
ATACAAAAGAACTAGTAGAA+GGG 0.590862 8_2:-44025908 Msa1249370:CDS
AACCCTTGGAAGACTTCTTG+GGG 0.592251 8_2:+44027577 None:intergenic
TCGTATACAGAAGCAACTGA+TGG 0.593251 8_2:-44025504 Msa1249370:CDS
ATTGTTGGTTCGTTATGCGA+GGG 0.595063 8_2:-44024880 Msa1249370:three_prime_UTR
ACACCCCAAGAAGTCTTCCA+AGG 0.595682 8_2:-44027580 Msa1249370:CDS
CTACCCATGTGAATTCCTAC+CGG 0.597503 8_2:+44026756 None:intergenic
CGGTTTGCATGGCATCAGGA+AGG 0.601497 8_2:-44024757 Msa1249370:three_prime_UTR
ATGATGGGAAAGGACTATGA+AGG 0.602097 8_2:+44026979 None:intergenic
AAGCTTATTTAATTGCCAAG+AGG 0.604527 8_2:-44026488 Msa1249370:CDS
CGGGAGCTGATGGTAACGAC+GGG 0.607532 8_2:+44025081 None:intergenic
TAGCATCTATCTCAACCTTG+AGG 0.607564 8_2:+44027336 None:intergenic
TAAATTTCAGATGATGGGAA+AGG 0.607697 8_2:+44026969 None:intergenic
GTAAGGGATGAAATTCTCAA+AGG 0.608917 8_2:-44026933 Msa1249370:CDS
CAAATTATAAATCCTGCAAG+GGG 0.610053 8_2:-44026543 Msa1249370:CDS
TTTACATCATGCAAACTGCT+GGG 0.611466 8_2:-44025727 Msa1249370:CDS
TGGAAAGAACAAAATGAGAA+CGG 0.611607 8_2:+44029620 None:intergenic
ATGCACATCACGAAATCTGG+TGG 0.613992 8_2:+44025161 None:intergenic
CTGATGGCCCCACTCAGAGA+AGG 0.614227 8_2:+44026207 None:intergenic
TGATGTGCATTGGAGATGAT+AGG 0.616649 8_2:-44025148 Msa1249370:CDS
CATTATACTAAAAGGTGCTG+GGG 0.617606 8_2:-44026012 Msa1249370:CDS
CAGCAGAACCCAAATTTGCA+GGG 0.618312 8_2:-44026582 Msa1249370:CDS
TAACATCTGATTCACCATCA+AGG 0.622114 8_2:+44027528 None:intergenic
ATATGTTAGTACTCATGATG+TGG 0.622726 8_2:-44026085 Msa1249370:CDS
CAGGTCATGGGGTAGAAAGG+TGG 0.624978 8_2:+44027262 None:intergenic
ACTGGATGACTTTAATTGCG+TGG 0.625192 8_2:-44027285 Msa1249370:CDS
CTTGGCAGGAGCCAAAATCA+GGG 0.629827 8_2:+44025427 None:intergenic
TCGTCAATGCTGTAAGGGAT+GGG 0.634025 8_2:-44026359 Msa1249370:CDS
GAATTTAGCCCTCAGTATGG+GGG 0.635859 8_2:-44026145 Msa1249370:CDS
GGTAGGTAGGAAGCCTAGCA+AGG 0.637239 8_2:-44025042 Msa1249370:CDS
GGTAGCATATAATGGAAGAG+AGG 0.639482 8_2:+44027197 None:intergenic
ATAGTGCGACTTTGTTGGTG+TGG 0.640693 8_2:-44024806 Msa1249370:three_prime_UTR
AAGTAGGCAAAATCATCAAG+TGG 0.641749 8_2:+44027042 None:intergenic
CACCCCAAGAAGTCTTCCAA+GGG 0.641869 8_2:-44027579 Msa1249370:CDS
GCAACTGCATCTATATCCCA+GGG 0.642398 8_2:+44026177 None:intergenic
GAGTTTGAACTTACCGGCGA+CGG 0.649294 8_2:+44029506 None:intergenic
TCAAGGAAAGTGCTTTGGTG+TGG 0.650646 8_2:-44025467 Msa1249370:CDS
TAGCAAGAACACTTTCCAAG+TGG 0.651389 8_2:+44025388 None:intergenic
TCGGGAGCTGATGGTAACGA+CGG 0.659800 8_2:+44025080 None:intergenic
TTTGCCGGTAGGAATTCACA+TGG 0.662631 8_2:-44026760 Msa1249370:CDS
TTGCATCGTCAATGCTGTAA+GGG 0.663687 8_2:-44026364 Msa1249370:CDS
TAAGCACTCTTCTCGAAACG+GGG 0.682811 8_2:+44026405 None:intergenic
GCAAAGCTGGATGAAGCTGT+GGG 0.684464 8_2:-44026291 Msa1249370:CDS
ACAACAAGCATGCTTGTACG+AGG 0.685754 8_2:+44026252 None:intergenic
TCGGGAGCGGAAAATCATTG+TGG 0.689766 8_2:-44027492 Msa1249370:CDS
TCTCGAAACGGGGAACAGAG+CGG 0.692951 8_2:+44026415 None:intergenic
GGATCTTGATTGGAAACAGG+TGG 0.695331 8_2:-44025544 Msa1249370:CDS
GCATCAGGAAGGTTGACGTG+TGG 0.697540 8_2:-44024746 Msa1249370:three_prime_UTR
CTGGACTATGAATCTAAGCG+CGG 0.708845 8_2:-44026828 Msa1249370:CDS
TTGCCGGTAGGAATTCACAT+GGG 0.730503 8_2:-44026759 Msa1249370:CDS
GCGACGGCGAGATTCCGGTG+AGG 0.774027 8_2:+44029534 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GGAATATTTTTTTTTATTTT+TGG - chr8_2:44024980-44024999 Msa1249370:CDS 10.0%
!!! ATTTTTTTTTATTTTTGGTT+TGG - chr8_2:44024985-44025004 Msa1249370:CDS 10.0%
!!! TATTTTTTTCTATTTTCTTT+TGG + chr8_2:44028327-44028346 None:intergenic 10.0%
!!! GGAAAATTTTAATTTGATTT+TGG - chr8_2:44025037-44025056 Msa1249370:CDS 15.0%
!! ATTTGTTTGTATTTGAATAA+AGG - chr8_2:44025198-44025217 Msa1249370:CDS 15.0%
!! TTTGTTTGTATTTGAATAAA+GGG - chr8_2:44025199-44025218 Msa1249370:CDS 15.0%
!! TGTACATGTTATTATAAATT+TGG - chr8_2:44025240-44025259 Msa1249370:intron 15.0%
!! ATTATAAATTTGGAAAATGA+TGG - chr8_2:44025250-44025269 Msa1249370:intron 15.0%
!!! AAAGTTACTTTGTTTAATTT+TGG - chr8_2:44025763-44025782 Msa1249370:CDS 15.0%
!! AAATGAATGAATTATTACAA+GGG - chr8_2:44026109-44026128 Msa1249370:CDS 15.0%
!!! TAGTATGTTAAATTTTTACA+TGG - chr8_2:44026180-44026199 Msa1249370:CDS 15.0%
!! ATTCTATTACAATTAAAAGA+TGG - chr8_2:44026566-44026585 Msa1249370:CDS 15.0%
!! TTCTATTACAATTAAAAGAT+GGG - chr8_2:44026567-44026586 Msa1249370:CDS 15.0%
!!! AAATTTTGATAAATATAGTG+CGG + chr8_2:44027183-44027202 None:intergenic 15.0%
!!! TATATTTATCAAAATTTTGC+CGG - chr8_2:44027186-44027205 Msa1249370:CDS 15.0%
!!! GTTTTATTAATATAAGATTG+TGG + chr8_2:44028111-44028130 None:intergenic 15.0%
!!! TAATGTATTTTTTTATTTGC+AGG - chr8_2:44028353-44028372 Msa1249370:intron 15.0%
!! TTACATACATAATTCTATTA+TGG - chr8_2:44029408-44029427 Msa1249370:intron 15.0%
!! CAACAATTGAATTGAAAAAA+CGG + chr8_2:44024546-44024565 None:intergenic 20.0%
!!! ATATTATTTTTCATCGTGTT+TGG - chr8_2:44024815-44024834 Msa1249370:three_prime_UTR 20.0%
!! GTAAATAAAATTATTGGGTT+TGG + chr8_2:44024852-44024871 None:intergenic 20.0%
!! CTTTGTGAAAAAAAAAATTG+TGG - chr8_2:44024959-44024978 Msa1249370:CDS 20.0%
!! AGGTTAAGATAATTGAAATA+GGG - chr8_2:44025016-44025035 Msa1249370:CDS 20.0%
!! AAAAAATTACATCTTACAAG+TGG + chr8_2:44025505-44025524 None:intergenic 20.0%
!!! TTTTTGTTTTCATGTTTACA+TGG - chr8_2:44025540-44025559 Msa1249370:CDS 20.0%
!! TTAAACAAAGTAACTTTACT+TGG + chr8_2:44025760-44025779 None:intergenic 20.0%
!! TCAAGCATTTATTTCATTAT+AGG + chr8_2:44025792-44025811 None:intergenic 20.0%
!! GTAATAATTCATTCATTTCA+GGG + chr8_2:44026107-44026126 None:intergenic 20.0%
!! TGTAATAATTCATTCATTTC+AGG + chr8_2:44026108-44026127 None:intergenic 20.0%
!! GAAATGAATGAATTATTACA+AGG - chr8_2:44026108-44026127 Msa1249370:CDS 20.0%
!! AAAGATAAGAAAGTTATTCT+TGG - chr8_2:44027292-44027311 Msa1249370:CDS 20.0%
!! TGCAAACAATATATTTGTAT+GGG + chr8_2:44027639-44027658 None:intergenic 20.0%
!!! AACAATGAACACAATATTTT+TGG + chr8_2:44028181-44028200 None:intergenic 20.0%
!!! TTTTTCTATTTTCTTTTGGT+GGG + chr8_2:44028323-44028342 None:intergenic 20.0%
!!! TTTTTTCTATTTTCTTTTGG+TGG + chr8_2:44028324-44028343 None:intergenic 20.0%
!! ACATCAATTGTTATATTTAC+TGG - chr8_2:44029277-44029296 Msa1249370:intron 20.0%
!!! ACTATACATGTTTGAAATTT+CGG + chr8_2:44029376-44029395 None:intergenic 20.0%
!! ACATGTATAGTTACATTATT+TGG - chr8_2:44029385-44029404 Msa1249370:intron 20.0%
!! TACTCATTTTCTAAACTCTT+TGG - chr8_2:44024570-44024589 Msa1249370:three_prime_UTR 25.0%
! ATAGTAAACGATGAACAATT+TGG + chr8_2:44024692-44024711 None:intergenic 25.0%
! TTCACAAAGTGTAAACTTAT+AGG + chr8_2:44024948-44024967 None:intergenic 25.0%
!!! TTTTTGGTTTGGATAATAAC+AGG - chr8_2:44024996-44025015 Msa1249370:CDS 25.0%
! CAGGTTAAGATAATTGAAAT+AGG - chr8_2:44025015-44025034 Msa1249370:CDS 25.0%
!! TGGTTTAGATAAGTTTTTGT+TGG - chr8_2:44025057-44025076 Msa1249370:CDS 25.0%
!! GGTTTAGATAAGTTTTTGTT+GGG - chr8_2:44025058-44025077 Msa1249370:CDS 25.0%
!! GTTTAGATAAGTTTTTGTTG+GGG - chr8_2:44025059-44025078 Msa1249370:CDS 25.0%
! GTATAATTGATGAATGTACT+TGG - chr8_2:44025123-44025142 Msa1249370:CDS 25.0%
!! TGTACTTGGATTGAAATTTT+TGG - chr8_2:44025137-44025156 Msa1249370:CDS 25.0%
! ACATCCAAAAAAACACATAA+TGG + chr8_2:44025164-44025183 None:intergenic 25.0%
!!! ATTATGTGTTTTTTTGGATG+TGG - chr8_2:44025163-44025182 Msa1249370:CDS 25.0%
! ATTATCTATCATGTTCAAAG+TGG - chr8_2:44025402-44025421 Msa1249370:CDS 25.0%
!!! TTCAAAGTGGTTTAAGTTTT+CGG - chr8_2:44025415-44025434 Msa1249370:CDS 25.0%
! CCAAATGAATATCATGTAAA+AGG + chr8_2:44025569-44025588 None:intergenic 25.0%
!! CCTTTTACATGATATTCATT+TGG - chr8_2:44025566-44025585 Msa1249370:CDS 25.0%
! TAAAAAGTGAAACACTTACA+GGG + chr8_2:44025630-44025649 None:intergenic 25.0%
! TTAACATACTACATCTTACA+TGG + chr8_2:44026171-44026190 None:intergenic 25.0%
! ATCCTACGAATAATATATCA+CGG + chr8_2:44026210-44026229 None:intergenic 25.0%
! ACAGATTAACACAACATTTA+CGG + chr8_2:44026238-44026257 None:intergenic 25.0%
! TTGTTGAATTCGGATTTAAT+TGG - chr8_2:44027052-44027071 Msa1249370:CDS 25.0%
! CAGGATTTATAATTTGAACA+AGG + chr8_2:44027414-44027433 None:intergenic 25.0%
! TTCAAATTATAAATCCTGCA+AGG - chr8_2:44027416-44027435 Msa1249370:CDS 25.0%
! TCAAATTATAAATCCTGCAA+GGG - chr8_2:44027417-44027436 Msa1249370:CDS 25.0%
! ATAAATTTCATTGATCCTCT+TGG + chr8_2:44027491-44027510 None:intergenic 25.0%
! AAGAGGATCAATGAAATTTA+TGG - chr8_2:44027490-44027509 Msa1249370:CDS 25.0%
! CTGCAAACAATATATTTGTA+TGG + chr8_2:44027640-44027659 None:intergenic 25.0%
! AAATATATTGTTTGCAGACA+GGG - chr8_2:44027643-44027662 Msa1249370:CDS 25.0%
! TTTAGTATAATGATCTTTGC+AGG + chr8_2:44027941-44027960 None:intergenic 25.0%
! GCAAAGATCATTATACTAAA+AGG - chr8_2:44027941-44027960 Msa1249370:intron 25.0%
!! TTTTGTATGCTGATACAATA+TGG + chr8_2:44028041-44028060 None:intergenic 25.0%
! ATACAAAAGAACTAGTAGAA+GGG - chr8_2:44028053-44028072 Msa1249370:intron 25.0%
! AATATTGTGTTCATTGTTAG+TGG - chr8_2:44028183-44028202 Msa1249370:intron 25.0%
!! TTTTCTATTTTCTTTTGGTG+GGG + chr8_2:44028322-44028341 None:intergenic 25.0%
!!! TGTATTTTTTTATTTGCAGG+TGG - chr8_2:44028356-44028375 Msa1249370:intron 25.0%
!! ATCATGAATTTTCTCTTTAC+AGG - chr8_2:44028718-44028737 Msa1249370:intron 25.0%
!! TCATGAATTTTCTCTTTACA+GGG - chr8_2:44028719-44028738 Msa1249370:intron 25.0%
TGGAAAGAACAAAATGAGAA+CGG + chr8_2:44024344-44024363 None:intergenic 30.0%
AAATCTTCAGTAGTGAAAAG+TGG + chr8_2:44024498-44024517 None:intergenic 30.0%
!!! GATTTGATGGGTTTTTTTTC+AGG - chr8_2:44025084-44025103 Msa1249370:CDS 30.0%
!!! GGTTTTTTTTCAGGAGAAAA+AGG - chr8_2:44025093-44025112 Msa1249370:CDS 30.0%
!!! TTTTTTTCAGGAGAAAAAGG+TGG - chr8_2:44025096-44025115 Msa1249370:CDS 30.0%
!!! TGGACCATTATGTGTTTTTT+TGG - chr8_2:44025157-44025176 Msa1249370:CDS 30.0%
! ATAAAGGGTTTCTTTTTCTG+TGG - chr8_2:44025214-44025233 Msa1249370:CDS 30.0%
AAAATGATGGCACATGAATT+TGG - chr8_2:44025263-44025282 Msa1249370:intron 30.0%
!!! TTTTTTCACATCCTTCTTGT+TGG - chr8_2:44025297-44025316 Msa1249370:intron 30.0%
! TTTTTCACATCCTTCTTGTT+GGG - chr8_2:44025298-44025317 Msa1249370:intron 30.0%
AAGTATAATTCCCAACAAGA+AGG + chr8_2:44025311-44025330 None:intergenic 30.0%
TGTCTGTAATAGTAGTTTAG+AGG - chr8_2:44025372-44025391 Msa1249370:CDS 30.0%
GTAAAAAGTGAAACACTTAC+AGG + chr8_2:44025631-44025650 None:intergenic 30.0%
! TTTACACGATTTTCATCTAG+TGG - chr8_2:44025646-44025665 Msa1249370:intron 30.0%
AATAAACAACGCAATTCAGA+TGG + chr8_2:44026013-44026032 None:intergenic 30.0%
!! TAGCTTGGTTTTCATATTGT+TGG + chr8_2:44026076-44026095 None:intergenic 30.0%
TCCTACGAATAATATATCAC+GGG + chr8_2:44026209-44026228 None:intergenic 30.0%
GAGATATTGATACTGCTAAA+TGG - chr8_2:44026519-44026538 Msa1249370:CDS 30.0%
AATATTTGCAGACAAAGTCA+TGG - chr8_2:44026853-44026872 Msa1249370:CDS 30.0%
AACCCAAACAAAATCATCAT+CGG + chr8_2:44026891-44026910 None:intergenic 30.0%
GATTTCATCGAGTTAAACTT+GGG - chr8_2:44026954-44026973 Msa1249370:CDS 30.0%
!! TAAATTTCAGATGATGGGAA+AGG + chr8_2:44026995-44027014 None:intergenic 30.0%
TCTCAAAGGATTGTTGAATT+CGG - chr8_2:44027042-44027061 Msa1249370:CDS 30.0%
CATATAGGACTTGATTACTT+TGG - chr8_2:44027157-44027176 Msa1249370:CDS 30.0%
! TTTATCAAAATTTTGCCGGT+AGG - chr8_2:44027190-44027209 Msa1249370:CDS 30.0%
TAAGAAAGTTATTCTTGGTG+TGG - chr8_2:44027297-44027316 Msa1249370:CDS 30.0%
!! GACGACATGGATATTTTTAA+GGG - chr8_2:44027319-44027338 Msa1249370:CDS 30.0%
CAAATTATAAATCCTGCAAG+GGG - chr8_2:44027418-44027437 Msa1249370:CDS 30.0%
AAGCTTATTTAATTGCCAAG+AGG - chr8_2:44027473-44027492 Msa1249370:CDS 30.0%
CAATATATTTGTATGGGACT+AGG + chr8_2:44027633-44027652 None:intergenic 30.0%
CAAATATATTGTTTGCAGAC+AGG - chr8_2:44027642-44027661 Msa1249370:CDS 30.0%
ATATGTTAGTACTCATGATG+TGG - chr8_2:44027876-44027895 Msa1249370:intron 30.0%
! ATCATTATACTAAAAGGTGC+TGG - chr8_2:44027947-44027966 Msa1249370:intron 30.0%
!! TCATTATACTAAAAGGTGCT+GGG - chr8_2:44027948-44027967 Msa1249370:intron 30.0%
! AGAGTTATTTCACTTTCTCA+TGG - chr8_2:44027994-44028013 Msa1249370:intron 30.0%
! TTTCACTTTCTCATGGTTTT+AGG - chr8_2:44028001-44028020 Msa1249370:intron 30.0%
CATACAAAAGAACTAGTAGA+AGG - chr8_2:44028052-44028071 Msa1249370:intron 30.0%
!!! CTGAACATGGTTACTTTTTA+AGG - chr8_2:44028265-44028284 Msa1249370:intron 30.0%
TGGATCTAATATTGAAGTCA+AGG - chr8_2:44028477-44028496 Msa1249370:intron 30.0%
AATTTGAAAAACTCTACCTG+TGG + chr8_2:44028646-44028665 None:intergenic 30.0%
! AGAAAATATTTTGCCTTGCT+AGG + chr8_2:44028935-44028954 None:intergenic 30.0%
! TCCTGTGAATCAGAAATTTT+TGG - chr8_2:44029110-44029129 Msa1249370:intron 30.0%
! CCTGTGAATCAGAAATTTTT+GGG - chr8_2:44029111-44029130 Msa1249370:intron 30.0%
!!! GACAGTTTTTTTCTTGTACA+TGG - chr8_2:44029252-44029271 Msa1249370:intron 30.0%
!!! TTCGACTTTTGAAGTTCTAT+TGG - chr8_2:44029442-44029461 Msa1249370:intron 30.0%
!!! TCGACTTTTGAAGTTCTATT+GGG - chr8_2:44029443-44029462 Msa1249370:intron 30.0%
! TTCCTAATAAGCTTTTGTCT+AGG - chr8_2:44029478-44029497 Msa1249370:intron 30.0%
! TCCTAATAAGCTTTTGTCTA+GGG - chr8_2:44029479-44029498 Msa1249370:intron 30.0%
CAATTGAACTGAGATAGAAT+TGG - chr8_2:44029541-44029560 Msa1249370:five_prime_UTR 30.0%
! TTCTTAAGTGTAAAGGTGTA+AGG + chr8_2:44029588-44029607 None:intergenic 30.0%
GTTGAAGTTCTTAAGTGTAA+AGG + chr8_2:44029595-44029614 None:intergenic 30.0%
GTAAAAAATTCAAGTGAGTC+TGG - chr8_2:44029624-44029643 Msa1249370:five_prime_UTR 30.0%
AGGTATGAGTTTGAACTTAC+CGG + chr8_2:44024464-44024483 None:intergenic 35.0%
!!! TTTTGTTGGGGTTGATTTGA+TGG - chr8_2:44025071-44025090 Msa1249370:CDS 35.0%
!! TTTGTTGGGGTTGATTTGAT+GGG - chr8_2:44025072-44025091 Msa1249370:CDS 35.0%
GTTTGACAACTGTAATGTGT+TGG - chr8_2:44025339-44025358 Msa1249370:CDS 35.0%
! TACCATTTTGCTTGCATACA+TGG - chr8_2:44025478-44025497 Msa1249370:CDS 35.0%
! AGGGACACTTTGTATCATTT+TGG + chr8_2:44025611-44025630 None:intergenic 35.0%
! GCATGATTAAGTGTTGTTAG+TGG - chr8_2:44025693-44025712 Msa1249370:intron 35.0%
!! GTTGTTAGTGGTTCACTTTT+TGG - chr8_2:44025705-44025724 Msa1249370:CDS 35.0%
ACTTGGAATCAGCAAAAACA+AGG + chr8_2:44025743-44025762 None:intergenic 35.0%
TGCTGACAACTAGACAAAAT+TGG + chr8_2:44025836-44025855 None:intergenic 35.0%
TCCCGTGATATATTATTCGT+AGG - chr8_2:44026205-44026224 Msa1249370:CDS 35.0%
! GCTAATCTTTTAGACTTAGC+TGG - chr8_2:44026335-44026354 Msa1249370:CDS 35.0%
! AATCTTTTAGACTTAGCTGG+TGG - chr8_2:44026338-44026357 Msa1249370:CDS 35.0%
TAACATCTGATTCACCATCA+AGG + chr8_2:44026436-44026455 None:intergenic 35.0%
! GAATCAGATGTTAGTTCTTC+TGG - chr8_2:44026443-44026462 Msa1249370:CDS 35.0%
! ATGTTAGTTCTTCTGGATGT+CGG - chr8_2:44026450-44026469 Msa1249370:CDS 35.0%
TGCTAAATGGTGTTTCAGTT+GGG - chr8_2:44026532-44026551 Msa1249370:CDS 35.0%
TGATACTGAGGTAATCTATG+TGG - chr8_2:44026598-44026617 Msa1249370:CDS 35.0%
GATACTGAGGTAATCTATGT+GGG - chr8_2:44026599-44026618 Msa1249370:CDS 35.0%
TGAAATTGCTCAGAGATTAC+TGG - chr8_2:44026658-44026677 Msa1249370:CDS 35.0%
!! CAAGATAGAACTTTTTCTGC+AGG + chr8_2:44026721-44026740 None:intergenic 35.0%
CTGCAGAAAAAGTTCTATCT+TGG - chr8_2:44026719-44026738 Msa1249370:CDS 35.0%
AGCATATGGGTAGCATATAA+TGG + chr8_2:44026775-44026794 None:intergenic 35.0%
! ATCCCGATGATGATTTTGTT+TGG - chr8_2:44026885-44026904 Msa1249370:CDS 35.0%
!! TCCCGATGATGATTTTGTTT+GGG - chr8_2:44026886-44026905 Msa1249370:CDS 35.0%
ACCCAAACAAAATCATCATC+GGG + chr8_2:44026890-44026909 None:intergenic 35.0%
AAGTAGGCAAAATCATCAAG+TGG + chr8_2:44026922-44026941 None:intergenic 35.0%
! TGATTTTGCCTACTTTCTTG+AGG - chr8_2:44026927-44026946 Msa1249370:CDS 35.0%
AATCGTTTCCTCAAGAAAGT+AGG + chr8_2:44026938-44026957 None:intergenic 35.0%
CGATTTCATCGAGTTAAACT+TGG - chr8_2:44026953-44026972 Msa1249370:CDS 35.0%
! TCCCATCATCTGAAATTTAC+CGG - chr8_2:44026996-44027015 Msa1249370:CDS 35.0%
TCCGGTAAATTTCAGATGAT+GGG + chr8_2:44027000-44027019 None:intergenic 35.0%
TTGAGAATTTCATCCCTTAC+TGG + chr8_2:44027028-44027047 None:intergenic 35.0%
GTAAGGGATGAAATTCTCAA+AGG - chr8_2:44027028-44027047 Msa1249370:CDS 35.0%
! TTTAGCTTAGAGGATGTAGA+AGG + chr8_2:44027253-44027272 None:intergenic 35.0%
!!! CTGAATCTCTTTTAGCTTAG+AGG + chr8_2:44027263-44027282 None:intergenic 35.0%
CTCTAAGCTAAAAGAGATTC+AGG - chr8_2:44027261-44027280 Msa1249370:CDS 35.0%
!! GGACGACATGGATATTTTTA+AGG - chr8_2:44027318-44027337 Msa1249370:CDS 35.0%
!! CAATCTGAAATTTCTAGCTG+TGG - chr8_2:44027345-44027364 Msa1249370:CDS 35.0%
AATAAGCACTCTTCTCGAAA+CGG + chr8_2:44027561-44027580 None:intergenic 35.0%
CATATCGATAGTGTTTCTCA+TGG + chr8_2:44027861-44027880 None:intergenic 35.0%
TACTCATGATGTGGCATATT+GGG - chr8_2:44027885-44027904 Msa1249370:intron 35.0%
!! CATTATACTAAAAGGTGCTG+GGG - chr8_2:44027949-44027968 Msa1249370:intron 35.0%
TGCTGATACAATATGGTCAA+TGG + chr8_2:44028034-44028053 None:intergenic 35.0%
GCCATCTTTCTTGATTATGA+TGG - chr8_2:44028075-44028094 Msa1249370:intron 35.0%
GCCATCATAATCAAGAAAGA+TGG + chr8_2:44028079-44028098 None:intergenic 35.0%
TAAGCACAGATATGACTTCA+GGG + chr8_2:44028140-44028159 None:intergenic 35.0%
TTAAGCACAGATATGACTTC+AGG + chr8_2:44028141-44028160 None:intergenic 35.0%
TTGTGTTCATTGTTAGTGGA+AGG - chr8_2:44028187-44028206 Msa1249370:intron 35.0%
TGTGTTCATTGTTAGTGGAA+GGG - chr8_2:44028188-44028207 Msa1249370:intron 35.0%
CAAGAGATTCTCTGAATGAA+TGG - chr8_2:44028211-44028230 Msa1249370:intron 35.0%
TTTACATCATGCAAACTGCT+GGG - chr8_2:44028234-44028253 Msa1249370:intron 35.0%
GGAAACAAGTCATTTGTTTG+CGG - chr8_2:44028396-44028415 Msa1249370:intron 35.0%
ATTTGTTTGCGGATCTTGAT+TGG - chr8_2:44028407-44028426 Msa1249370:intron 35.0%
GAACCAGCAATTGTTAAAAG+AGG - chr8_2:44028598-44028617 Msa1249370:intron 35.0%
GCTTAACTTCAACAATATGC+TGG + chr8_2:44028624-44028643 None:intergenic 35.0%
TATTGTTGAAGTTAAGCCAC+AGG - chr8_2:44028627-44028646 Msa1249370:intron 35.0%
! CTTACTAGTTTCACTGTTAG+AGG + chr8_2:44028684-44028703 None:intergenic 35.0%
TGAGAAGGTTCTCTTGAATA+TGG - chr8_2:44028763-44028782 Msa1249370:intron 35.0%
CTCTTGAATATGGTTAATGC+CGG - chr8_2:44028773-44028792 Msa1249370:intron 35.0%
GATGTTGTAAAGTTGCTTGA+TGG - chr8_2:44028968-44028987 Msa1249370:intron 35.0%
!!! TTTGGGCTTTTGATTTGTTG+AGG + chr8_2:44029002-44029021 None:intergenic 35.0%
CTCAAAAGAAACCTGGAATT+GGG + chr8_2:44029032-44029051 None:intergenic 35.0%
TCTCAAAAGAAACCTGGAAT+TGG + chr8_2:44029033-44029052 None:intergenic 35.0%
!! TTTTGAGAGCACAGTTTCTT+AGG - chr8_2:44029045-44029064 Msa1249370:intron 35.0%
CCCAAAAATTTCTGATTCAC+AGG + chr8_2:44029114-44029133 None:intergenic 35.0%
!!! CGACTTTTGAAGTTCTATTG+GGG - chr8_2:44029444-44029463 Msa1249370:intron 35.0%
ACCCTAGACAAAAGCTTATT+AGG + chr8_2:44029483-44029502 None:intergenic 35.0%
TTTCAGGAGAAAAAGGTGGT+AGG - chr8_2:44025100-44025119 Msa1249370:CDS 40.0%
TTCAGGAGAAAAAGGTGGTA+GGG - chr8_2:44025101-44025120 Msa1249370:CDS 40.0%
GACCATGTATGCAAGCAAAA+TGG + chr8_2:44025483-44025502 None:intergenic 40.0%
!! AATACTAACTCTAAGACGCG+TGG + chr8_2:44025908-44025927 None:intergenic 40.0%
TGATATGAAGAAGTGACGAC+AGG + chr8_2:44025940-44025959 None:intergenic 40.0%
TTTCATCTATCATCACGTCC+TGG - chr8_2:44025966-44025985 Msa1249370:CDS 40.0%
TTCAGGGATATTCACTAGCT+TGG + chr8_2:44026091-44026110 None:intergenic 40.0%
GGTATGAGCAAATACATGCA+TGG + chr8_2:44026150-44026169 None:intergenic 40.0%
TAACCCTTGGAAGACTTCTT+GGG + chr8_2:44026388-44026407 None:intergenic 40.0%
ATAACCCTTGGAAGACTTCT+TGG + chr8_2:44026389-44026408 None:intergenic 40.0%
TCAAGGTCAGAAATAATCCC+AGG + chr8_2:44026419-44026438 None:intergenic 40.0%
!! GGGATTATTTCTGACCTTGA+TGG - chr8_2:44026419-44026438 Msa1249370:CDS 40.0%
! TGTTAGTTCTTCTGGATGTC+GGG - chr8_2:44026451-44026470 Msa1249370:CDS 40.0%
! ATATCTCTTTTAGCCTGCAG+CGG + chr8_2:44026506-44026525 None:intergenic 40.0%
CTGCTAAATGGTGTTTCAGT+TGG - chr8_2:44026531-44026550 Msa1249370:CDS 40.0%
! TGGGTTTTCTTCTGATACTG+AGG - chr8_2:44026586-44026605 Msa1249370:CDS 40.0%
AGCATCTATCTCAACCTTGA+GGG + chr8_2:44026627-44026646 None:intergenic 40.0%
TAGCATCTATCTCAACCTTG+AGG + chr8_2:44026628-44026647 None:intergenic 40.0%
ACTGGATGACTTTAATTGCG+TGG - chr8_2:44026676-44026695 Msa1249370:CDS 40.0%
!! AACTTTTTCTGCAGGTCATG+GGG + chr8_2:44026713-44026732 None:intergenic 40.0%
!! GAACTTTTTCTGCAGGTCAT+GGG + chr8_2:44026714-44026733 None:intergenic 40.0%
!! AGAACTTTTTCTGCAGGTCA+TGG + chr8_2:44026715-44026734 None:intergenic 40.0%
! GGTAGCATATAATGGAAGAG+AGG + chr8_2:44026767-44026786 None:intergenic 40.0%
TCACCATGATCTGAGCATAT+GGG + chr8_2:44026788-44026807 None:intergenic 40.0%
ATCACCATGATCTGAGCATA+TGG + chr8_2:44026789-44026808 None:intergenic 40.0%
! ATGATGGGAAAGGACTATGA+AGG + chr8_2:44026985-44027004 None:intergenic 40.0%
GTCCGGTAAATTTCAGATGA+TGG + chr8_2:44027001-44027020 None:intergenic 40.0%
CAACTTCACCCTGCAAATTT+GGG + chr8_2:44027390-44027409 None:intergenic 40.0%
ACAACTTCACCCTGCAAATT+TGG + chr8_2:44027391-44027410 None:intergenic 40.0%
ATAAGCACTCTTCTCGAAAC+GGG + chr8_2:44027560-44027579 None:intergenic 40.0%
TTGCATCGTCAATGCTGTAA+GGG - chr8_2:44027597-44027616 Msa1249370:CDS 40.0%
! CTTGTTGTGTCTGAGTTCAT+TGG - chr8_2:44027724-44027743 Msa1249370:intron 40.0%
GTACTCATGATGTGGCATAT+TGG - chr8_2:44027884-44027903 Msa1249370:intron 40.0%
!! ACGCAGTTTTATGCAGGATT+TGG - chr8_2:44027909-44027928 Msa1249370:intron 40.0%
GTTTACATCATGCAAACTGC+TGG - chr8_2:44028233-44028252 Msa1249370:intron 40.0%
TCGTATACAGAAGCAACTGA+TGG - chr8_2:44028457-44028476 Msa1249370:intron 40.0%
!! TGAAGTCAAGGAAAGTGCTT+TGG - chr8_2:44028489-44028508 Msa1249370:intron 40.0%
TAGCAAGAACACTTTCCAAG+TGG + chr8_2:44028576-44028595 None:intergenic 40.0%
! TGGCCTCTTTTAACAATTGC+TGG + chr8_2:44028604-44028623 None:intergenic 40.0%
TCTTTACAGGGAGTAACCAA+AGG - chr8_2:44028731-44028750 Msa1249370:intron 40.0%
TGATGTGCATTGGAGATGAT+AGG - chr8_2:44028813-44028832 Msa1249370:intron 40.0%
TACCGTGCAAGCAAAAATCT+CGG + chr8_2:44028903-44028922 None:intergenic 40.0%
!! TTTGATTTGTTGAGGTAGCG+AGG + chr8_2:44028994-44029013 None:intergenic 40.0%
TGGAATTGGGCAAGATGTTT+GGG + chr8_2:44029019-44029038 None:intergenic 40.0%
AACGAACCAACAATGCTGTT+TGG + chr8_2:44029075-44029094 None:intergenic 40.0%
!! ATTGTTGGTTCGTTATGCGA+GGG - chr8_2:44029081-44029100 Msa1249370:intron 40.0%
GTGTGGATCAGATTCTTTCT+GGG - chr8_2:44029172-44029191 Msa1249370:intron 40.0%
AGTACAAGCAACGATCAATC+AGG + chr8_2:44029341-44029360 None:intergenic 40.0%
GAGAGAGAGAGAGAGAAGAA+TGG + chr8_2:44024364-44024383 None:intergenic 45.0%
GAAAAGTGGTGAGTGAAGAG+AGG + chr8_2:44024484-44024503 None:intergenic 45.0%
ACTGTCGAACAAATAGCACC+AGG + chr8_2:44025987-44026006 None:intergenic 45.0%
AACCCTTGGAAGACTTCTTG+GGG + chr8_2:44026387-44026406 None:intergenic 45.0%
CAAGGGTTATGACTGTTCCT+GGG - chr8_2:44026399-44026418 Msa1249370:CDS 45.0%
ATGGTGTTTCAGTTGGGATG+AGG - chr8_2:44026538-44026557 Msa1249370:CDS 45.0%
AATCTATGTGGGTTCCCTCA+AGG - chr8_2:44026610-44026629 Msa1249370:CDS 45.0%
TGAGATAGATGCTAGTGAGC+AGG - chr8_2:44026634-44026653 Msa1249370:CDS 45.0%
! GTTTTTGTAAGCAGCAGCTC+TGG - chr8_2:44026741-44026760 Msa1249370:CDS 45.0%
CTACCCATATGCTCAGATCA+TGG - chr8_2:44026782-44026801 Msa1249370:CDS 45.0%
TTTACCGGACTTTGCCAGTA+AGG - chr8_2:44027011-44027030 Msa1249370:CDS 45.0%
TTACCGGACTTTGCCAGTAA+GGG - chr8_2:44027012-44027031 Msa1249370:CDS 45.0%
TCTTGCTGCAGTAGAATGCT+AGG - chr8_2:44027109-44027128 Msa1249370:CDS 45.0%
CTGGACTATGAATCTAAGCG+CGG - chr8_2:44027133-44027152 Msa1249370:CDS 45.0%
GAATCTAAGCGCGGACATAT+AGG - chr8_2:44027142-44027161 Msa1249370:CDS 45.0%
TTTGCCGGTAGGAATTCACA+TGG - chr8_2:44027201-44027220 Msa1249370:CDS 45.0%
TTGCCGGTAGGAATTCACAT+GGG - chr8_2:44027202-44027221 Msa1249370:CDS 45.0%
CTACCCATGTGAATTCCTAC+CGG + chr8_2:44027208-44027227 None:intergenic 45.0%
! TATTCTTGGTGTGGACGACA+TGG - chr8_2:44027306-44027325 Msa1249370:CDS 45.0%
CAGCAGAACCCAAATTTGCA+GGG - chr8_2:44027379-44027398 Msa1249370:CDS 45.0%
ATAAATCCTGCAAGGGGTTC+AGG - chr8_2:44027424-44027443 Msa1249370:CDS 45.0%
TAAATCCTGCAAGGGGTTCA+GGG - chr8_2:44027425-44027444 Msa1249370:CDS 45.0%
! GAGCGGTCAATGATAATGAC+TGG + chr8_2:44027532-44027551 None:intergenic 45.0%
TAAGCACTCTTCTCGAAACG+GGG + chr8_2:44027559-44027578 None:intergenic 45.0%
GTTGCATCGTCAATGCTGTA+AGG - chr8_2:44027596-44027615 Msa1249370:CDS 45.0%
ATCGTCAATGCTGTAAGGGA+TGG - chr8_2:44027601-44027620 Msa1249370:CDS 45.0%
TCGTCAATGCTGTAAGGGAT+GGG - chr8_2:44027602-44027621 Msa1249370:CDS 45.0%
ACAACAAGCATGCTTGTACG+AGG + chr8_2:44027712-44027731 None:intergenic 45.0%
GTTGTTCACCTTCTCTGAGT+GGG - chr8_2:44027746-44027765 Msa1249370:intron 45.0%
TTGTTCACCTTCTCTGAGTG+GGG - chr8_2:44027747-44027766 Msa1249370:intron 45.0%
GCAACTGCATCTATATCCCA+GGG + chr8_2:44027787-44027806 None:intergenic 45.0%
AGCAACTGCATCTATATCCC+AGG + chr8_2:44027788-44027807 None:intergenic 45.0%
!! ACTAAAAGGTGCTGGGGAAT+TGG - chr8_2:44027955-44027974 Msa1249370:intron 45.0%
ACAGATATGACTTCAGGGCT+GGG + chr8_2:44028135-44028154 None:intergenic 45.0%
GACTGAGGAGGAAGAAACAA+AGG + chr8_2:44028298-44028317 None:intergenic 45.0%
GTGGAATAGCGACTCTGAAT+GGG - chr8_2:44028375-44028394 Msa1249370:intron 45.0%
TGCGGATCTTGATTGGAAAC+AGG - chr8_2:44028414-44028433 Msa1249370:intron 45.0%
GGATCTTGATTGGAAACAGG+TGG - chr8_2:44028417-44028436 Msa1249370:intron 45.0%
TCTGTATACGACTGCATGAC+AGG + chr8_2:44028448-44028467 None:intergenic 45.0%
!! TCAAGGAAAGTGCTTTGGTG+TGG - chr8_2:44028494-44028513 Msa1249370:intron 45.0%
! CAAGATGCAGACCCTGATTT+TGG - chr8_2:44028523-44028542 Msa1249370:intron 45.0%
CAAGTGGTCCAGCAATTCTT+TGG + chr8_2:44028560-44028579 None:intergenic 45.0%
CAAAGAATTGCTGGACCACT+TGG - chr8_2:44028558-44028577 Msa1249370:intron 45.0%
ACAGGGAGTAACCAAAGGTT+TGG - chr8_2:44028736-44028755 Msa1249370:intron 45.0%
CTTCTCAGCTACCAAACCTT+TGG + chr8_2:44028750-44028769 None:intergenic 45.0%
! CAAAGGTTTGGTAGCTGAGA+AGG - chr8_2:44028748-44028767 Msa1249370:intron 45.0%
!! CACGAAATCTGGTGGATTAC+CGG + chr8_2:44028795-44028814 None:intergenic 45.0%
ATGCACATCACGAAATCTGG+TGG + chr8_2:44028803-44028822 None:intergenic 45.0%
CCAATGCACATCACGAAATC+TGG + chr8_2:44028806-44028825 None:intergenic 45.0%
CCAGATTTCGTGATGTGCAT+TGG - chr8_2:44028803-44028822 Msa1249370:intron 45.0%
! TCCCGAGATTTTTGCTTGCA+CGG - chr8_2:44028898-44028917 Msa1249370:intron 45.0%
ACCGTGCAAGCAAAAATCTC+GGG + chr8_2:44028902-44028921 None:intergenic 45.0%
! GAGATTTTTGCTTGCACGGT+AGG - chr8_2:44028902-44028921 Msa1249370:intron 45.0%
! TTTTTGCTTGCACGGTAGGT+AGG - chr8_2:44028906-44028925 Msa1249370:intron 45.0%
CTGGAATTGGGCAAGATGTT+TGG + chr8_2:44029020-44029039 None:intergenic 45.0%
CAAACATCTTGCCCAATTCC+AGG - chr8_2:44029018-44029037 Msa1249370:intron 45.0%
CTGTGCTCTCAAAAGAAACC+TGG + chr8_2:44029039-44029058 None:intergenic 45.0%
!! CATTGTTGGTTCGTTATGCG+AGG - chr8_2:44029080-44029099 Msa1249370:intron 45.0%
ACAAAGTCGCACTATTCGTC+AGG + chr8_2:44029150-44029169 None:intergenic 45.0%
GACGAATAGTGCGACTTTGT+TGG - chr8_2:44029150-44029169 Msa1249370:intron 45.0%
ATAGTGCGACTTTGTTGGTG+TGG - chr8_2:44029155-44029174 Msa1249370:intron 45.0%
GGTGTGGATCAGATTCTTTC+TGG - chr8_2:44029171-44029190 Msa1249370:intron 45.0%
TTCTTTCTGGGCTCCTGAAT+CGG - chr8_2:44029184-44029203 Msa1249370:intron 45.0%
ACTGGTGCTTCATTGAGCAT+CGG - chr8_2:44029295-44029314 Msa1249370:intron 45.0%
!! ATATAGTAAATAAAATTATT+GGG + chr8_2:44024857-44024876 None:intergenic 5.0%
!! AATATAGTAAATAAAATTAT+TGG + chr8_2:44024858-44024877 None:intergenic 5.0%
GAGTTTGAACTTACCGGCGA+CGG + chr8_2:44024458-44024477 None:intergenic 50.0%
GAAGTGACGACAGGTCAACT+AGG + chr8_2:44025931-44025950 None:intergenic 50.0%
ACACCCCAAGAAGTCTTCCA+AGG - chr8_2:44026381-44026400 Msa1249370:CDS 50.0%
CACCCCAAGAAGTCTTCCAA+GGG - chr8_2:44026382-44026401 Msa1249370:CDS 50.0%
CCAGGAACAGTCATAACCCT+TGG + chr8_2:44026401-44026420 None:intergenic 50.0%
CCAAGGGTTATGACTGTTCC+TGG - chr8_2:44026398-44026417 Msa1249370:CDS 50.0%
TCGGGAGCGGAAAATCATTG+TGG - chr8_2:44026469-44026488 Msa1249370:CDS 50.0%
ATCGCTTTGACCGAGTGCTT+TGG - chr8_2:44026807-44026826 Msa1249370:CDS 50.0%
! CATAAGCCTGCCAAAGCACT+CGG + chr8_2:44026820-44026839 None:intergenic 50.0%
CATCCCTTACTGGCAAAGTC+CGG + chr8_2:44027018-44027037 None:intergenic 50.0%
CTGCAGTAGAATGCTAGGTC+TGG - chr8_2:44027114-44027133 Msa1249370:CDS 50.0%
CGGTAGGAATTCACATGGGT+AGG - chr8_2:44027206-44027225 Msa1249370:CDS 50.0%
GCAGCAGAACCCAAATTTGC+AGG - chr8_2:44027378-44027397 Msa1249370:CDS 50.0%
TGCAAAGCTGGATGAAGCTG+TGG - chr8_2:44027669-44027688 Msa1249370:five_prime_UTR 50.0%
GCAAAGCTGGATGAAGCTGT+GGG - chr8_2:44027670-44027689 Msa1249370:five_prime_UTR 50.0%
GGTTGTTCACCTTCTCTGAG+TGG - chr8_2:44027745-44027764 Msa1249370:intron 50.0%
!! TTGGGCACGCAGTTTTATGC+AGG - chr8_2:44027903-44027922 Msa1249370:intron 50.0%
AGATATGACTTCAGGGCTGG+GGG + chr8_2:44028133-44028152 None:intergenic 50.0%
CAGATATGACTTCAGGGCTG+GGG + chr8_2:44028134-44028153 None:intergenic 50.0%
CACAGATATGACTTCAGGGC+TGG + chr8_2:44028136-44028155 None:intergenic 50.0%
! TTCTTTTGGTGGGGTGACTG+AGG + chr8_2:44028313-44028332 None:intergenic 50.0%
GGTGGAATAGCGACTCTGAA+TGG - chr8_2:44028374-44028393 Msa1249370:intron 50.0%
CTTGGCAGGAGCCAAAATCA+GGG + chr8_2:44028537-44028556 None:intergenic 50.0%
!! CAGCAATTCTTTGGCTTGGC+AGG + chr8_2:44028551-44028570 None:intergenic 50.0%
CTGCCAAGCCAAAGAATTGC+TGG - chr8_2:44028549-44028568 Msa1249370:intron 50.0%
GGTCCAGCAATTCTTTGGCT+TGG + chr8_2:44028555-44028574 None:intergenic 50.0%
GCAAAAATCTCGGGAGCTGA+TGG + chr8_2:44028893-44028912 None:intergenic 50.0%
! GAGAGCACAGTTTCTTAGGC+AGG - chr8_2:44029049-44029068 Msa1249370:intron 50.0%
! GATGCCATGCAAACCGATTC+AGG + chr8_2:44029200-44029219 None:intergenic 50.0%
!! GAATCGGTTTGCATGGCATC+AGG - chr8_2:44029200-44029219 Msa1249370:intron 50.0%
CACTACGCGTTTCACCTCAC+CGG - chr8_2:44024413-44024432 Msa1249370:three_prime_UTR 55.0%
GAACTTACCGGCGACGGTAA+CGG + chr8_2:44024452-44024471 None:intergenic 55.0%
GGAAGACTTCTTGGGGTGTG+AGG + chr8_2:44026380-44026399 None:intergenic 55.0%
GTTCTTCTGGATGTCGGGAG+CGG - chr8_2:44026456-44026475 Msa1249370:CDS 55.0%
CAGGTCATGGGGTAGAAAGG+TGG + chr8_2:44026702-44026721 None:intergenic 55.0%
CTGCAGGTCATGGGGTAGAA+AGG + chr8_2:44026705-44026724 None:intergenic 55.0%
CTTTGACCGAGTGCTTTGGC+AGG - chr8_2:44026811-44026830 Msa1249370:CDS 55.0%
GGGTTCAGGGAAGGATGTTC+AGG - chr8_2:44027438-44027457 Msa1249370:CDS 55.0%
TCTCGAAACGGGGAACAGAG+CGG + chr8_2:44027549-44027568 None:intergenic 55.0%
CAGACAGGGAACTGCAAAGC+TGG - chr8_2:44027657-44027676 Msa1249370:exon 55.0%
TTCTCTGAGTGGGGCCATCA+GGG - chr8_2:44027756-44027775 Msa1249370:intron 55.0%
ATCCCAGGGATTGACCCTGA+TGG + chr8_2:44027773-44027792 None:intergenic 55.0%
!! AAGGTGCTGGGGAATTGGTC+TGG - chr8_2:44027960-44027979 Msa1249370:intron 55.0%
!! AGGTGCTGGGGAATTGGTCT+GGG - chr8_2:44027961-44027980 Msa1249370:intron 55.0%
! TGGGGAATTGGTCTGGGCTT+GGG - chr8_2:44027967-44027986 Msa1249370:intron 55.0%
CTGGGACTTGCAGCTGAACA+TGG - chr8_2:44028252-44028271 Msa1249370:intron 55.0%
! TTTTGGTGGGGTGACTGAGG+AGG + chr8_2:44028310-44028329 None:intergenic 55.0%
GCTTGGCAGGAGCCAAAATC+AGG + chr8_2:44028538-44028557 None:intergenic 55.0%
! TCGGGAGCTGATGGTAACGA+CGG + chr8_2:44028884-44028903 None:intergenic 55.0%
GGTAGGTAGGAAGCCTAGCA+AGG - chr8_2:44028919-44028938 Msa1249370:intron 55.0%
GGCAGGCCAAACAGCATTGT+TGG - chr8_2:44029066-44029085 Msa1249370:intron 55.0%
!! GGCTCCTGAATCGGTTTGCA+TGG - chr8_2:44029193-44029212 Msa1249370:intron 55.0%
CGGTTTGCATGGCATCAGGA+AGG - chr8_2:44029204-44029223 Msa1249370:intron 55.0%
GCATCAGGAAGGTTGACGTG+TGG - chr8_2:44029215-44029234 Msa1249370:intron 55.0%
GAAGGTTGACGTGTGGTTCG+TGG - chr8_2:44029222-44029241 Msa1249370:intron 55.0%
TAACGGCGACGGCGAGATTC+CGG + chr8_2:44024435-44024454 None:intergenic 60.0%
GGCAAACATGTTGCCGCTGC+AGG - chr8_2:44026490-44026509 Msa1249370:CDS 60.0%
TCCTGCAAGGGGTTCAGGGA+AGG - chr8_2:44027429-44027448 Msa1249370:CDS 60.0%
TCCTTCCCTGAACCCCTTGC+AGG + chr8_2:44027433-44027452 None:intergenic 60.0%
CTGATGGCCCCACTCAGAGA+AGG + chr8_2:44027757-44027776 None:intergenic 60.0%
CTTCTCTGAGTGGGGCCATC+AGG - chr8_2:44027755-44027774 Msa1249370:intron 60.0%
GGCCATCAGGGTCAATCCCT+GGG - chr8_2:44027768-44027787 Msa1249370:intron 60.0%
! CTGGGGAATTGGTCTGGGCT+TGG - chr8_2:44027966-44027985 Msa1249370:intron 60.0%
! GGGGAATTGGTCTGGGCTTG+GGG - chr8_2:44027968-44027987 Msa1249370:intron 60.0%
! CGGGAGCTGATGGTAACGAC+GGG + chr8_2:44028883-44028902 None:intergenic 60.0%
GGGCCATCAGGGTCAATCCC+TGG - chr8_2:44027767-44027786 Msa1249370:intron 65.0%
GCGACGGCGAGATTCCGGTG+AGG + chr8_2:44024430-44024449 None:intergenic 70.0%
! ACCGGCGACGGTAACGGCGA+CGG + chr8_2:44024446-44024465 None:intergenic 70.0%
GCCGTCGCCGTTACCGTCGC+CGG - chr8_2:44024442-44024461 Msa1249370:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 44024336 44029647 44024336 ID=Msa1249370;Name=Msa1249370
chr8_2 mRNA 44024336 44029647 44024336 ID=Msa1249370-mRNA-1;Parent=Msa1249370;Name=Msa1249370-mRNA-1;_AED=0.00;_eAED=0.00;_QI=163|1|1|1|0.66|0.5|4|581|856
chr8_2 exon 44024336 44025243 44024336 ID=Msa1249370-mRNA-1:exon:13391;Parent=Msa1249370-mRNA-1
chr8_2 exon 44025335 44025608 44025335 ID=Msa1249370-mRNA-1:exon:13390;Parent=Msa1249370-mRNA-1
chr8_2 exon 44025697 44027701 44025697 ID=Msa1249370-mRNA-1:exon:13389;Parent=Msa1249370-mRNA-1
chr8_2 exon 44029520 44029647 44029520 ID=Msa1249370-mRNA-1:exon:13388;Parent=Msa1249370-mRNA-1
chr8_2 five_prime_UTR 44029520 44029647 44029520 ID=Msa1249370-mRNA-1:five_prime_utr;Parent=Msa1249370-mRNA-1
chr8_2 five_prime_UTR 44027667 44027701 44027667 ID=Msa1249370-mRNA-1:five_prime_utr;Parent=Msa1249370-mRNA-1
chr8_2 CDS 44025697 44027666 44025697 ID=Msa1249370-mRNA-1:cds;Parent=Msa1249370-mRNA-1
chr8_2 CDS 44025335 44025608 44025335 ID=Msa1249370-mRNA-1:cds;Parent=Msa1249370-mRNA-1
chr8_2 CDS 44024917 44025243 44024917 ID=Msa1249370-mRNA-1:cds;Parent=Msa1249370-mRNA-1
chr8_2 three_prime_UTR 44024336 44024916 44024336 ID=Msa1249370-mRNA-1:three_prime_utr;Parent=Msa1249370-mRNA-1
Gene Sequence

>Msa1249370

ATGACATCAAGATCGTATGCTAATCTTTTAGACTTAGCTGGTGGAGACTTGCTTGATATTCCTCACACCCCAAGAAGTCTTCCAAGGGTTATGACTGTTCCTGGGATTATTTCTGACCTTGATGGTGAATCAGATGTTAGTTCTTCTGGATGTCGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCGCTGCAGGCTAAAAGAGATATTGATACTGCTAAATGGTGTTTCAGTTGGGATGAGGATTCAATTCTATTACAATTAAAAGATGGGTTTTCTTCTGATACTGAGGTAATCTATGTGGGTTCCCTCAAGGTTGAGATAGATGCTAGTGAGCAGGATGAAATTGCTCAGAGATTACTGGATGACTTTAATTGCGTGGCCACCTTTCTACCCCATGACCTGCAGAAAAAGTTCTATCTTGGTTTTTGTAAGCAGCAGCTCTGGCCTCTCTTCCATTATATGCTACCCATATGCTCAGATCATGGTGATCGCTTTGACCGAGTGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAAGTCATGGAAGTGATTGATCCCGATGATGATTTTGTTTGGGTTCATGACTACCACTTGATGATTTTGCCTACTTTCTTGAGGAAACGATTTCATCGAGTTAAACTTGGGTTTTTCCTTCATAGTCCTTTCCCATCATCTGAAATTTACCGGACTTTGCCAGTAAGGGATGAAATTCTCAAAGGATTGTTGAATTCGGATTTAATTGGTTTTCATACATTCGATTACGCACGTCACTTTCTTTCTTGCTGCAGTAGAATGCTAGGTCTGGACTATGAATCTAAGCGCGGACATATAGGACTTGATTACTTTGGCCGCACTATATTTATCAAAATTTTGCCGGTAGGAATTCACATGGGTAGGCTTGACTCTGTATTAAATCTTCCTTCTACATCCTCTAAGCTAAAAGAGATTCAGGAAGAGTTTAAAGATAAGAAAGTTATTCTTGGTGTGGACGACATGGATATTTTTAAGGGTATCAATCTGAAATTTCTAGCTGTGGAACAGCTGCTGCAGCAGAACCCAAATTTGCAGGGTGAAGTTGTCCTTGTTCAAATTATAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAAAGAAGCTTATTTAATTGCCAAGAGGATCAATGAAATTTATGGTTCAAAACATTATCAGCCAGTCATTATCATTGACCGCTCTGTTCCCCGTTTCGAGAAGAGTGCTTATTATGCTCTAGCTGAATGTTGCATCGTCAATGCTGTAAGGGATGGGATGAACCTAGTCCCATACAAATATATTGTTTGCAGACAGGGAACTGCAAAGCTGGATGAAGCTGTGGGTAGACAAAGTGATTCTCCTCGTACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCACCTTCTCTGAGTGGGGCCATCAGGGTCAATCCCTGGGATATAGATGCAGTTGCTGATGCTATGAATTTAGCCCTCAGTATGGGGGTTTCTGAGAAGAAGTTGCGCCATGAGAAACACTATCGATATGTTAGTACTCATGATGTGGCATATTGGGCACGCAGTTTTATGCAGGATTTGGAGAGAGCCTGCAAAGATCATTATACTAAAAGGTGCTGGGGAATTGGTCTGGGCTTGGGGTTCAGAGTTATTTCACTTTCTCATGGTTTTAGGAAGCTGTCCATTGACCATATTGTATCAGCATACAAAAGAACTAGTAGAAGGGCCATCTTTCTTGATTATGATGGCACTCTTGTACCACAATCTTATATTAATAAAACCCCCAGCCCTGAAGTCATATCTGTGCTTAATTCTCTTTGTAATGATACCAAAAATATTGTGTTCATTGTTAGTGGAAGGGCAAGAGATTCTCTGAATGAATGGTTTACATCATGCAAACTGCTGGGACTTGCAGCTGAACATGGTTACTTTTTAAGGTGGAATAGCGACTCTGAATGGGAAACAAGTCATTTGTTTGCGGATCTTGATTGGAAACAGGTGGTGCTGCCTGTCATGCAGTCGTATACAGAAGCAACTGATGGATCTAATATTGAAGTCAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGCTCCTGCCAAGCCAAAGAATTGCTGGACCACTTGGAAAGTGTTCTTGCTAATGAACCAGCAATTGTTAAAAGAGGCCAGCATATTGTTGAAGTTAAGCCACAGGGAGTAACCAAAGGTTTGGTAGCTGAGAAGGTTCTCTTGAATATGGTTAATGCCGGTAATCCACCAGATTTCGTGATGTGCATTGGAGATGATAGGTCTGATGAAGACATGTTTGAAAGCATTTTGAGTACAGTCTCGTGCCCGTCGTTACCATCAGCTCCCGAGATTTTTGCTTGCACGGTAGGTAGGAAGCCTAGCAAGGCAAAATATTTTCTTGATGACACTGCTGATGTTGTAAAGTTGCTTGATGGCCTCGCTACCTCAACAAATCAAAAGCCCAAACATCTTGCCCAATTCCAGGTTTCTTTTGAGAGCACAGTTTCTTAG
Protein sequence

>Msa1249370

MTSRSYANLLDLAGGDLLDIPHTPRSLPRVMTVPGIISDLDGESDVSSSGCRERKIIVANMLPLQAKRDIDTAKWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKVEIDASEQDEIAQRLLDDFNCVATFLPHDLQKKFYLGFCKQQLWPLFHYMLPICSDHGDRFDRVLWQAYVSANKIFADKVMEVIDPDDDFVWVHDYHLMILPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLDSVLNLPSTSSKLKEIQEEFKDKKVILGVDDMDIFKGINLKFLAVEQLLQQNPNLQGEVVLVQIINPARGSGKDVQEAKKEAYLIAKRINEIYGSKHYQPVIIIDRSVPRFEKSAYYALAECCIVNAVRDGMNLVPYKYIVCRQGTAKLDEAVGRQSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMNLALSMGVSEKKLRHEKHYRYVSTHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVISLSHGFRKLSIDHIVSAYKRTSRRAIFLDYDGTLVPQSYINKTPSPEVISVLNSLCNDTKNIVFIVSGRARDSLNEWFTSCKLLGLAAEHGYFLRWNSDSEWETSHLFADLDWKQVVLPVMQSYTEATDGSNIEVKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAIVKRGQHIVEVKPQGVTKGLVAEKVLLNMVNAGNPPDFVMCIGDDRSDEDMFESILSTVSCPSLPSAPEIFACTVGRKPSKAKYFLDDTADVVKLLDGLATSTNQKPKHLAQFQVSFESTVS*