Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343200 | XP_003611736.1 | 96.314 | 407 | 9 | 3 | 1 | 404 | 1 | 404 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343200 | G7K6N7 | 96.314 | 407 | 9 | 3 | 1 | 404 | 1 | 404 | 0.0 | 769 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa0343200 | 0.807741 | 4.359754e-50 | -8.615850e-47 |
| Msa0008330 | Msa0343200 | 0.840024 | 1.115463e-57 | -8.615850e-47 |
| Msa0014790 | Msa0343200 | 0.809760 | 1.613856e-50 | -8.615850e-47 |
| Msa0014970 | Msa0343200 | 0.803215 | 3.876904e-49 | -8.615850e-47 |
| Msa0017420 | Msa0343200 | 0.806760 | 7.032531e-50 | -8.615850e-47 |
| Msa0021980 | Msa0343200 | 0.897918 | 8.816465e-77 | -8.615850e-47 |
| Msa0026120 | Msa0343200 | 0.815506 | 8.929747e-52 | -8.615850e-47 |
| Msa0026670 | Msa0343200 | 0.806761 | 7.031245e-50 | -8.615850e-47 |
| Msa0029020 | Msa0343200 | -0.807531 | 4.829032e-50 | -8.615850e-47 |
| Msa0036150 | Msa0343200 | 0.824060 | 9.901850e-54 | -8.615850e-47 |
| Msa0047230 | Msa0343200 | 0.821489 | 3.929065e-53 | -8.615850e-47 |
| Msa0050320 | Msa0343200 | 0.803295 | 3.732267e-49 | -8.615850e-47 |
| Msa0053480 | Msa0343200 | 0.897508 | 1.313652e-76 | -8.615850e-47 |
| Msa0053960 | Msa0343200 | 0.858234 | 9.475911e-63 | -8.615850e-47 |
| Msa0055650 | Msa0343200 | 0.802899 | 4.505794e-49 | -8.615850e-47 |
| Msa0059880 | Msa0343200 | -0.811129 | 8.169283e-51 | -8.615850e-47 |
| Msa0063850 | Msa0343200 | 0.812350 | 4.431605e-51 | -8.615850e-47 |
| Msa0064440 | Msa0343200 | 0.832288 | 1.029776e-55 | -8.615850e-47 |
| Msa0070090 | Msa0343200 | 0.871106 | 8.800125e-67 | -8.615850e-47 |
| Msa0076650 | Msa0343200 | -0.800001 | 1.768836e-48 | -8.615850e-47 |
| Msa0081840 | Msa0343200 | 0.806635 | 7.475199e-50 | -8.615850e-47 |
| Msa0083550 | Msa0343200 | 0.800424 | 1.450420e-48 | -8.615850e-47 |
| Msa0089410 | Msa0343200 | 0.826486 | 2.642248e-54 | -8.615850e-47 |
| Msa0090350 | Msa0343200 | 0.836835 | 7.413610e-57 | -8.615850e-47 |
| Msa0099090 | Msa0343200 | 0.820279 | 7.461025e-53 | -8.615850e-47 |
| Msa0116470 | Msa0343200 | 0.803012 | 4.269956e-49 | -8.615850e-47 |
| Msa0116510 | Msa0343200 | 0.805091 | 1.578098e-49 | -8.615850e-47 |
| Msa0117300 | Msa0343200 | 0.875430 | 3.101084e-68 | -8.615850e-47 |
| Msa0128070 | Msa0343200 | 0.801818 | 7.524258e-49 | -8.615850e-47 |
| Msa0130100 | Msa0343200 | 0.818897 | 1.541956e-52 | -8.615850e-47 |
| Msa0131090 | Msa0343200 | 0.833137 | 6.339168e-56 | -8.615850e-47 |
| Msa0136520 | Msa0343200 | 0.822291 | 2.562004e-53 | -8.615850e-47 |
| Msa0143280 | Msa0343200 | 0.812430 | 4.255847e-51 | -8.615850e-47 |
| Msa0143360 | Msa0343200 | 0.815746 | 7.894472e-52 | -8.615850e-47 |
| Msa0145180 | Msa0343200 | 0.810699 | 1.012384e-50 | -8.615850e-47 |
| Msa0148430 | Msa0343200 | 0.841011 | 6.154604e-58 | -8.615850e-47 |
| Msa0150910 | Msa0343200 | -0.803531 | 3.334762e-49 | -8.615850e-47 |
| Msa0151810 | Msa0343200 | 0.800219 | 1.596821e-48 | -8.615850e-47 |
| Msa0154720 | Msa0343200 | 0.803494 | 3.393854e-49 | -8.615850e-47 |
| Msa0155030 | Msa0343200 | 0.809234 | 2.092813e-50 | -8.615850e-47 |
| Msa0155500 | Msa0343200 | 0.826938 | 2.060932e-54 | -8.615850e-47 |
| Msa0160650 | Msa0343200 | 0.877549 | 5.746601e-69 | -8.615850e-47 |
| Msa0163530 | Msa0343200 | 0.821729 | 3.458917e-53 | -8.615850e-47 |
| Msa0164630 | Msa0343200 | 0.827652 | 1.390110e-54 | -8.615850e-47 |
| Msa0166580 | Msa0343200 | 0.820782 | 5.717540e-53 | -8.615850e-47 |
| Msa0181410 | Msa0343200 | 0.800000 | 1.769357e-48 | -8.615850e-47 |
| Msa0184030 | Msa0343200 | 0.857839 | 1.241669e-62 | -8.615850e-47 |
| Msa0198140 | Msa0343200 | 0.800906 | 1.156617e-48 | -8.615850e-47 |
| Msa0201910 | Msa0343200 | 0.815104 | 1.096805e-51 | -8.615850e-47 |
| Msa0206600 | Msa0343200 | 0.801374 | 9.282030e-49 | -8.615850e-47 |
| Msa0207220 | Msa0343200 | 0.817093 | 3.942498e-52 | -8.615850e-47 |
| Msa0207900 | Msa0343200 | 0.805272 | 1.446482e-49 | -8.615850e-47 |
| Msa0208400 | Msa0343200 | 0.813148 | 2.963874e-51 | -8.615850e-47 |
| Msa0208560 | Msa0343200 | 0.813572 | 2.392168e-51 | -8.615850e-47 |
| Msa0210870 | Msa0343200 | 0.807342 | 5.298224e-50 | -8.615850e-47 |
| Msa0213090 | Msa0343200 | 0.803915 | 2.775669e-49 | -8.615850e-47 |
| Msa0221940 | Msa0343200 | 0.834990 | 2.176633e-56 | -8.615850e-47 |
| Msa0225370 | Msa0343200 | 0.803065 | 4.164419e-49 | -8.615850e-47 |
| Msa0226580 | Msa0343200 | 0.818512 | 1.885824e-52 | -8.615850e-47 |
| Msa0244370 | Msa0343200 | 0.812529 | 4.050304e-51 | -8.615850e-47 |
| Msa0251140 | Msa0343200 | 0.844939 | 5.539470e-59 | -8.615850e-47 |
| Msa0264940 | Msa0343200 | -0.836187 | 1.083957e-56 | -8.615850e-47 |
| Msa0266380 | Msa0343200 | 0.802041 | 6.771809e-49 | -8.615850e-47 |
| Msa0282880 | Msa0343200 | 0.814235 | 1.708543e-51 | -8.615850e-47 |
| Msa0288270 | Msa0343200 | 0.829065 | 6.339190e-55 | -8.615850e-47 |
| Msa0288280 | Msa0343200 | 0.816703 | 4.822444e-52 | -8.615850e-47 |
| Msa0301300 | Msa0343200 | 0.804164 | 2.463627e-49 | -8.615850e-47 |
| Msa0302990 | Msa0343200 | -0.837701 | 4.450821e-57 | -8.615850e-47 |
| Msa0303860 | Msa0343200 | -0.803229 | 3.851802e-49 | -8.615850e-47 |
| Msa0304990 | Msa0343200 | 0.817653 | 2.948952e-52 | -8.615850e-47 |
| Msa0311330 | Msa0343200 | 0.808237 | 3.418772e-50 | -8.615850e-47 |
| Msa0311620 | Msa0343200 | 0.812942 | 3.288142e-51 | -8.615850e-47 |
| Msa0314980 | Msa0343200 | 0.800360 | 1.495012e-48 | -8.615850e-47 |
| Msa0321180 | Msa0343200 | 0.806987 | 6.298351e-50 | -8.615850e-47 |
| Msa0321200 | Msa0343200 | 0.805870 | 1.083064e-49 | -8.615850e-47 |
| Msa0324390 | Msa0343200 | 0.835152 | 1.982022e-56 | -8.615850e-47 |
| Msa0324430 | Msa0343200 | 0.845375 | 4.223155e-59 | -8.615850e-47 |
| Msa0328840 | Msa0343200 | 0.818181 | 2.240935e-52 | -8.615850e-47 |
| Msa0330400 | Msa0343200 | 0.800755 | 1.241658e-48 | -8.615850e-47 |
| Msa0334650 | Msa0343200 | 0.805702 | 1.174832e-49 | -8.615850e-47 |
| Msa0338610 | Msa0343200 | 0.824381 | 8.325823e-54 | -8.615850e-47 |
| Msa0340530 | Msa0343200 | 0.832469 | 9.289318e-56 | -8.615850e-47 |
| Msa0343200 | Msa0343460 | 0.817497 | 3.198376e-52 | -8.615850e-47 |
| Msa0343200 | Msa0359230 | 0.849932 | 2.353076e-60 | -8.615850e-47 |
| Msa0343200 | Msa0365360 | 0.855766 | 5.061909e-62 | -8.615850e-47 |
| Msa0343200 | Msa0368790 | 0.843037 | 1.792265e-58 | -8.615850e-47 |
| Msa0343200 | Msa0369360 | 0.805339 | 1.400184e-49 | -8.615850e-47 |
| Msa0343200 | Msa0372990 | 0.835281 | 1.838559e-56 | -8.615850e-47 |
| Msa0343200 | Msa0373110 | 0.837546 | 4.875495e-57 | -8.615850e-47 |
| Msa0343200 | Msa0379720 | 0.830920 | 2.238170e-55 | -8.615850e-47 |
| Msa0343200 | Msa0383550 | -0.802763 | 4.808308e-49 | -8.615850e-47 |
| Msa0343200 | Msa0387180 | -0.800726 | 1.258831e-48 | -8.615850e-47 |
| Msa0343200 | Msa0389050 | 0.817067 | 3.996055e-52 | -8.615850e-47 |
| Msa0343200 | Msa0411000 | 0.802545 | 5.332486e-49 | -8.615850e-47 |
| Msa0343200 | Msa0412660 | 0.835432 | 1.683751e-56 | -8.615850e-47 |
| Msa0343200 | Msa0416800 | 0.818379 | 2.021425e-52 | -8.615850e-47 |
| Msa0343200 | Msa0421390 | 0.846848 | 1.678046e-59 | -8.615850e-47 |
| Msa0343200 | Msa0429100 | 0.832190 | 1.088922e-55 | -8.615850e-47 |
| Msa0343200 | Msa0429130 | 0.832089 | 1.153348e-55 | -8.615850e-47 |
| Msa0343200 | Msa0431250 | 0.831857 | 1.316058e-55 | -8.615850e-47 |
| Msa0343200 | Msa0431390 | 0.842579 | 2.372011e-58 | -8.615850e-47 |
| Msa0343200 | Msa0431940 | 0.847609 | 1.037822e-59 | -8.615850e-47 |
| Msa0343200 | Msa0440110 | 0.804446 | 2.151853e-49 | -8.615850e-47 |
| Msa0343200 | Msa0441780 | -0.834195 | 3.448793e-56 | -8.615850e-47 |
| Msa0343200 | Msa0448400 | 0.811449 | 6.963876e-51 | -8.615850e-47 |
| Msa0343200 | Msa0451370 | 0.833655 | 4.708432e-56 | -8.615850e-47 |
| Msa0343200 | Msa0452010 | 0.805684 | 1.185444e-49 | -8.615850e-47 |
| Msa0343200 | Msa0457370 | 0.808089 | 3.675304e-50 | -8.615850e-47 |
| Msa0343200 | Msa0467480 | 0.828637 | 8.047855e-55 | -8.615850e-47 |
| Msa0343200 | Msa0468050 | -0.848763 | 4.982796e-60 | -8.615850e-47 |
| Msa0343200 | Msa0496460 | 0.828938 | 6.805479e-55 | -8.615850e-47 |
| Msa0343200 | Msa0496470 | 0.813029 | 3.147082e-51 | -8.615850e-47 |
| Msa0343200 | Msa0498920 | 0.834919 | 2.268779e-56 | -8.615850e-47 |
| Msa0343200 | Msa0516480 | 0.803051 | 4.191826e-49 | -8.615850e-47 |
| Msa0343200 | Msa0520810 | 0.835911 | 1.273560e-56 | -8.615850e-47 |
| Msa0343200 | Msa0525940 | 0.835223 | 1.901746e-56 | -8.615850e-47 |
| Msa0343200 | Msa0535020 | 0.859572 | 3.769312e-63 | -8.615850e-47 |
| Msa0343200 | Msa0535050 | 0.862869 | 3.731803e-64 | -8.615850e-47 |
| Msa0343200 | Msa0544930 | 0.826947 | 2.050330e-54 | -8.615850e-47 |
| Msa0343200 | Msa0548720 | 0.821171 | 4.653822e-53 | -8.615850e-47 |
| Msa0343200 | Msa0553570 | 0.816288 | 5.975654e-52 | -8.615850e-47 |
| Msa0343200 | Msa0554440 | 0.838958 | 2.110678e-57 | -8.615850e-47 |
| Msa0343200 | Msa0555510 | 0.850217 | 1.959057e-60 | -8.615850e-47 |
| Msa0343200 | Msa0560370 | 0.806218 | 9.153586e-50 | -8.615850e-47 |
| Msa0343200 | Msa0563140 | 0.804321 | 2.285011e-49 | -8.615850e-47 |
| Msa0343200 | Msa0563230 | 0.815756 | 7.853751e-52 | -8.615850e-47 |
| Msa0343200 | Msa0566010 | 0.807759 | 4.321062e-50 | -8.615850e-47 |
| Msa0343200 | Msa0575540 | 0.863866 | 1.833021e-64 | -8.615850e-47 |
| Msa0343200 | Msa0584590 | 0.841439 | 4.749315e-58 | -8.615850e-47 |
| Msa0343200 | Msa0585930 | 0.874786 | 5.145467e-68 | -8.615850e-47 |
| Msa0343200 | Msa0587060 | 0.822815 | 1.935483e-53 | -8.615850e-47 |
| Msa0343200 | Msa0591780 | 0.849622 | 2.872878e-60 | -8.615850e-47 |
| Msa0343200 | Msa0595240 | 0.824206 | 9.150323e-54 | -8.615850e-47 |
| Msa0343200 | Msa0597300 | 0.818047 | 2.402720e-52 | -8.615850e-47 |
| Msa0343200 | Msa0599250 | 0.803263 | 3.789631e-49 | -8.615850e-47 |
| Msa0343200 | Msa0604130 | 0.824249 | 8.939591e-54 | -8.615850e-47 |
| Msa0343200 | Msa0607620 | 0.845661 | 3.534490e-59 | -8.615850e-47 |
| Msa0343200 | Msa0608940 | 0.824160 | 9.380509e-54 | -8.615850e-47 |
| Msa0343200 | Msa0610850 | 0.815463 | 9.126276e-52 | -8.615850e-47 |
| Msa0343200 | Msa0618260 | 0.827307 | 1.681438e-54 | -8.615850e-47 |
| Msa0343200 | Msa0619670 | -0.800163 | 1.639779e-48 | -8.615850e-47 |
| Msa0343200 | Msa0623360 | 0.807898 | 4.036993e-50 | -8.615850e-47 |
| Msa0343200 | Msa0625440 | 0.802050 | 6.742963e-49 | -8.615850e-47 |
| Msa0343200 | Msa0626230 | 0.831653 | 1.477751e-55 | -8.615850e-47 |
| Msa0343200 | Msa0626890 | 0.826008 | 3.433578e-54 | -8.615850e-47 |
| Msa0343200 | Msa0632560 | 0.801627 | 8.236813e-49 | -8.615850e-47 |
| Msa0343200 | Msa0636750 | 0.835701 | 1.439618e-56 | -8.615850e-47 |
| Msa0343200 | Msa0636760 | 0.837590 | 4.750980e-57 | -8.615850e-47 |
| Msa0343200 | Msa0639880 | 0.811627 | 6.368641e-51 | -8.615850e-47 |
| Msa0343200 | Msa0641020 | 0.817648 | 2.957305e-52 | -8.615850e-47 |
| Msa0343200 | Msa0641030 | 0.818466 | 1.931660e-52 | -8.615850e-47 |
| Msa0343200 | Msa0645460 | 0.824856 | 6.433664e-54 | -8.615850e-47 |
| Msa0343200 | Msa0647860 | 0.807107 | 5.941662e-50 | -8.615850e-47 |
| Msa0343200 | Msa0648170 | 0.814358 | 1.605037e-51 | -8.615850e-47 |
| Msa0343200 | Msa0648200 | 0.850156 | 2.037887e-60 | -8.615850e-47 |
| Msa0343200 | Msa0648300 | 0.849022 | 4.221997e-60 | -8.615850e-47 |
| Msa0343200 | Msa0649530 | 0.848611 | 5.487427e-60 | -8.615850e-47 |
| Msa0343200 | Msa0651340 | 0.802588 | 5.225332e-49 | -8.615850e-47 |
| Msa0343200 | Msa0657820 | 0.816143 | 6.436882e-52 | -8.615850e-47 |
| Msa0343200 | Msa0657860 | 0.850506 | 1.624528e-60 | -8.615850e-47 |
| Msa0343200 | Msa0664110 | 0.887171 | 1.803397e-72 | -8.615850e-47 |
| Msa0343200 | Msa0664130 | 0.896500 | 3.474096e-76 | -8.615850e-47 |
| Msa0343200 | Msa0665010 | 0.812614 | 3.879621e-51 | -8.615850e-47 |
| Msa0343200 | Msa0675250 | 0.807028 | 6.174049e-50 | -8.615850e-47 |
| Msa0343200 | Msa0679560 | 0.806316 | 8.727861e-50 | -8.615850e-47 |
| Msa0343200 | Msa0684910 | 0.847612 | 1.036124e-59 | -8.615850e-47 |
| Msa0343200 | Msa0684920 | 0.830873 | 2.298521e-55 | -8.615850e-47 |
| Msa0343200 | Msa0685880 | 0.827735 | 1.327834e-54 | -8.615850e-47 |
| Msa0343200 | Msa0690580 | 0.816469 | 5.442854e-52 | -8.615850e-47 |
| Msa0343200 | Msa0691140 | 0.859968 | 2.865152e-63 | -8.615850e-47 |
| Msa0343200 | Msa0691180 | 0.802026 | 6.821141e-49 | -8.615850e-47 |
| Msa0343200 | Msa0691740 | 0.821638 | 3.630789e-53 | -8.615850e-47 |
| Msa0343200 | Msa0693560 | 0.805268 | 1.448680e-49 | -8.615850e-47 |
| Msa0343200 | Msa0697600 | 0.800747 | 1.246598e-48 | -8.615850e-47 |
| Msa0343200 | Msa0700250 | 0.811471 | 6.887529e-51 | -8.615850e-47 |
| Msa0343200 | Msa0714060 | 0.829800 | 4.203980e-55 | -8.615850e-47 |
| Msa0343200 | Msa0714200 | 0.830644 | 2.614474e-55 | -8.615850e-47 |
| Msa0343200 | Msa0714930 | 0.943649 | 8.223894e-103 | -8.615850e-47 |
| Msa0343200 | Msa0718920 | 0.813598 | 2.360677e-51 | -8.615850e-47 |
| Msa0343200 | Msa0722930 | 0.805197 | 1.499248e-49 | -8.615850e-47 |
| Msa0343200 | Msa0723140 | 0.825718 | 4.022716e-54 | -8.615850e-47 |
| Msa0343200 | Msa0727300 | 0.800949 | 1.133579e-48 | -8.615850e-47 |
| Msa0343200 | Msa0729780 | 0.813417 | 2.586623e-51 | -8.615850e-47 |
| Msa0343200 | Msa0738600 | 0.835634 | 1.496980e-56 | -8.615850e-47 |
| Msa0343200 | Msa0748980 | 0.840093 | 1.069961e-57 | -8.615850e-47 |
| Msa0343200 | Msa0753330 | 0.815581 | 8.593375e-52 | -8.615850e-47 |
| Msa0343200 | Msa0756440 | 0.810311 | 1.227933e-50 | -8.615850e-47 |
| Msa0343200 | Msa0756940 | 0.993221 | 2.960565e-198 | -8.615850e-47 |
| Msa0343200 | Msa0759380 | 0.805073 | 1.591821e-49 | -8.615850e-47 |
| Msa0343200 | Msa0775420 | 0.809332 | 1.993829e-50 | -8.615850e-47 |
| Msa0343200 | Msa0778030 | 0.804333 | 2.271871e-49 | -8.615850e-47 |
| Msa0343200 | Msa0795400 | 0.817941 | 2.539130e-52 | -8.615850e-47 |
| Msa0343200 | Msa0796460 | 0.803162 | 3.976272e-49 | -8.615850e-47 |
| Msa0343200 | Msa0797210 | 0.803667 | 3.124776e-49 | -8.615850e-47 |
| Msa0343200 | Msa0807980 | 0.810478 | 1.129702e-50 | -8.615850e-47 |
| Msa0343200 | Msa0815380 | 0.811284 | 7.560082e-51 | -8.615850e-47 |
| Msa0343200 | Msa0818950 | 0.840272 | 9.607941e-58 | -8.615850e-47 |
| Msa0343200 | Msa0819740 | 0.810030 | 1.411387e-50 | -8.615850e-47 |
| Msa0343200 | Msa0825520 | 0.829220 | 5.814045e-55 | -8.615850e-47 |
| Msa0343200 | Msa0835550 | 0.832900 | 7.260900e-56 | -8.615850e-47 |
| Msa0343200 | Msa0836510 | 0.994865 | 6.851957e-211 | -8.615850e-47 |
| Msa0343200 | Msa0843280 | 0.827848 | 1.247239e-54 | -8.615850e-47 |
| Msa0343200 | Msa0855520 | 0.802443 | 5.595975e-49 | -8.615850e-47 |
| Msa0343200 | Msa0864730 | 0.828858 | 7.115747e-55 | -8.615850e-47 |
| Msa0343200 | Msa0864750 | 0.828223 | 1.012838e-54 | -8.615850e-47 |
| Msa0343200 | Msa0868040 | 0.800385 | 1.477555e-48 | -8.615850e-47 |
| Msa0343200 | Msa0883390 | 0.822394 | 2.425574e-53 | -8.615850e-47 |
| Msa0343200 | Msa0883410 | 0.824811 | 6.593280e-54 | -8.615850e-47 |
| Msa0343200 | Msa0883660 | 0.821589 | 3.726404e-53 | -8.615850e-47 |
| Msa0343200 | Msa0883670 | 0.809542 | 1.797493e-50 | -8.615850e-47 |
| Msa0343200 | Msa0883700 | 0.813146 | 2.966560e-51 | -8.615850e-47 |
| Msa0343200 | Msa0887000 | 0.853995 | 1.652571e-61 | -8.615850e-47 |
| Msa0343200 | Msa0927890 | 0.807933 | 3.966890e-50 | -8.615850e-47 |
| Msa0343200 | Msa0930090 | 0.855247 | 7.172174e-62 | -8.615850e-47 |
| Msa0343200 | Msa0951720 | 0.812521 | 4.065244e-51 | -8.615850e-47 |
| Msa0343200 | Msa0967250 | 0.819556 | 1.091576e-52 | -8.615850e-47 |
| Msa0343200 | Msa0967260 | 0.814453 | 1.529282e-51 | -8.615850e-47 |
| Msa0343200 | Msa0973130 | 0.809087 | 2.250149e-50 | -8.615850e-47 |
| Msa0343200 | Msa0984820 | 0.823676 | 1.218670e-53 | -8.615850e-47 |
| Msa0343200 | Msa0984840 | 0.816318 | 5.883986e-52 | -8.615850e-47 |
| Msa0343200 | Msa0984850 | 0.820002 | 8.631456e-53 | -8.615850e-47 |
| Msa0343200 | Msa0985040 | 0.808299 | 3.316010e-50 | -8.615850e-47 |
| Msa0343200 | Msa0998940 | 0.817274 | 3.590947e-52 | -8.615850e-47 |
| Msa0343200 | Msa1008960 | 0.855656 | 5.450030e-62 | -8.615850e-47 |
| Msa0343200 | Msa1009020 | 0.808018 | 3.805204e-50 | -8.615850e-47 |
| Msa0343200 | Msa1018720 | 0.843380 | 1.452214e-58 | -8.615850e-47 |
| Msa0343200 | Msa1031220 | 0.845069 | 5.111564e-59 | -8.615850e-47 |
| Msa0343200 | Msa1031530 | 0.809589 | 1.756008e-50 | -8.615850e-47 |
| Msa0343200 | Msa1032350 | 0.804784 | 1.828931e-49 | -8.615850e-47 |
| Msa0343200 | Msa1033670 | 0.813454 | 2.538977e-51 | -8.615850e-47 |
| Msa0343200 | Msa1036360 | 0.838717 | 2.436225e-57 | -8.615850e-47 |
| Msa0343200 | Msa1038110 | 0.805855 | 1.091033e-49 | -8.615850e-47 |
| Msa0343200 | Msa1038610 | 0.808133 | 3.598102e-50 | -8.615850e-47 |
| Msa0343200 | Msa1038890 | 0.821317 | 4.305452e-53 | -8.615850e-47 |
| Msa0343200 | Msa1042380 | 0.812493 | 4.123111e-51 | -8.615850e-47 |
| Msa0343200 | Msa1044450 | 0.896663 | 2.971880e-76 | -8.615850e-47 |
| Msa0343200 | Msa1050320 | 0.861448 | 1.018840e-63 | -8.615850e-47 |
| Msa0343200 | Msa1067710 | 0.815181 | 1.054426e-51 | -8.615850e-47 |
| Msa0343200 | Msa1076630 | 0.802822 | 4.674427e-49 | -8.615850e-47 |
| Msa0343200 | Msa1076640 | 0.839437 | 1.585739e-57 | -8.615850e-47 |
| Msa0343200 | Msa1078810 | 0.852877 | 3.459764e-61 | -8.615850e-47 |
| Msa0343200 | Msa1080280 | 0.800431 | 1.445614e-48 | -8.615850e-47 |
| Msa0343200 | Msa1081530 | 0.803850 | 2.863066e-49 | -8.615850e-47 |
| Msa0343200 | Msa1103610 | 0.822772 | 1.981229e-53 | -8.615850e-47 |
| Msa0343200 | Msa1108780 | 0.857340 | 1.744441e-62 | -8.615850e-47 |
| Msa0343200 | Msa1113210 | 0.855089 | 7.971385e-62 | -8.615850e-47 |
| Msa0343200 | Msa1113280 | 0.832141 | 1.119719e-55 | -8.615850e-47 |
| Msa0343200 | Msa1117830 | 0.812572 | 3.963433e-51 | -8.615850e-47 |
| Msa0343200 | Msa1125040 | 0.814917 | 1.206913e-51 | -8.615850e-47 |
| Msa0343200 | Msa1125100 | 0.816349 | 5.790889e-52 | -8.615850e-47 |
| Msa0343200 | Msa1125150 | 0.810015 | 1.422054e-50 | -8.615850e-47 |
| Msa0343200 | Msa1125450 | 0.823287 | 1.502416e-53 | -8.615850e-47 |
| Msa0343200 | Msa1128780 | 0.810353 | 1.202462e-50 | -8.615850e-47 |
| Msa0343200 | Msa1147190 | 0.835100 | 2.042421e-56 | -8.615850e-47 |
| Msa0343200 | Msa1151970 | 0.818531 | 1.867653e-52 | -8.615850e-47 |
| Msa0343200 | Msa1161520 | 0.808241 | 3.410794e-50 | -8.615850e-47 |
| Msa0343200 | Msa1164570 | 0.815652 | 8.283841e-52 | -8.615850e-47 |
| Msa0343200 | Msa1166170 | 0.835370 | 1.745581e-56 | -8.615850e-47 |
| Msa0343200 | Msa1166270 | 0.834587 | 2.750106e-56 | -8.615850e-47 |
| Msa0343200 | Msa1169640 | 0.842929 | 1.914779e-58 | -8.615850e-47 |
| Msa0343200 | Msa1172070 | 0.821238 | 4.489245e-53 | -8.615850e-47 |
| Msa0343200 | Msa1182400 | 0.854284 | 1.363653e-61 | -8.615850e-47 |
| Msa0343200 | Msa1186010 | 0.808190 | 3.497387e-50 | -8.615850e-47 |
| Msa0343200 | Msa1190980 | 0.852412 | 4.695168e-61 | -8.615850e-47 |
| Msa0343200 | Msa1191390 | 0.817611 | 3.014847e-52 | -8.615850e-47 |
| Msa0343200 | Msa1194170 | -0.836324 | 1.000645e-56 | -8.615850e-47 |
| Msa0343200 | Msa1199750 | 0.838274 | 3.170409e-57 | -8.615850e-47 |
| Msa0343200 | Msa1201990 | 0.806150 | 9.459495e-50 | -8.615850e-47 |
| Msa0343200 | Msa1204390 | 0.862102 | 6.429030e-64 | -8.615850e-47 |
| Msa0343200 | Msa1208070 | 0.825050 | 5.789761e-54 | -8.615850e-47 |
| Msa0343200 | Msa1208250 | 0.822808 | 1.943483e-53 | -8.615850e-47 |
| Msa0343200 | Msa1211280 | 0.834114 | 3.613939e-56 | -8.615850e-47 |
| Msa0343200 | Msa1211370 | 0.838135 | 3.442322e-57 | -8.615850e-47 |
| Msa0343200 | Msa1212740 | 0.814468 | 1.516940e-51 | -8.615850e-47 |
| Msa0343200 | Msa1213460 | 0.812911 | 3.340856e-51 | -8.615850e-47 |
| Msa0343200 | Msa1216700 | 0.831781 | 1.373676e-55 | -8.615850e-47 |
| Msa0343200 | Msa1216900 | 0.820837 | 5.553099e-53 | -8.615850e-47 |
| Msa0343200 | Msa1228280 | 0.802236 | 6.174347e-49 | -8.615850e-47 |
| Msa0343200 | Msa1228330 | 0.801103 | 1.054631e-48 | -8.615850e-47 |
| Msa0343200 | Msa1230190 | 0.856726 | 2.647175e-62 | -8.615850e-47 |
| Msa0343200 | Msa1237260 | 0.827522 | 1.493172e-54 | -8.615850e-47 |
| Msa0343200 | Msa1244300 | 0.833908 | 4.069273e-56 | -8.615850e-47 |
| Msa0343200 | Msa1244650 | 0.817486 | 3.216859e-52 | -8.615850e-47 |
| Msa0343200 | Msa1249370 | -0.825308 | 5.030722e-54 | -8.615850e-47 |
| Msa0343200 | Msa1255520 | 0.801301 | 9.604174e-49 | -8.615850e-47 |
| Msa0343200 | Msa1260510 | 0.813856 | 2.070894e-51 | -8.615850e-47 |
| Msa0343200 | Msa1262740 | 0.808163 | 3.545355e-50 | -8.615850e-47 |
| Msa0343200 | Msa1263610 | 0.805566 | 1.255024e-49 | -8.615850e-47 |
| Msa0343200 | Msa1272770 | 0.840110 | 1.059087e-57 | -8.615850e-47 |
| Msa0343200 | Msa1278420 | 0.811180 | 7.964741e-51 | -8.615850e-47 |
| Msa0343200 | Msa1279310 | 0.807226 | 5.605886e-50 | -8.615850e-47 |
| Msa0343200 | Msa1279320 | 0.806343 | 8.615048e-50 | -8.615850e-47 |
| Msa0343200 | Msa1287160 | 0.832359 | 9.888384e-56 | -8.615850e-47 |
| Msa0343200 | Msa1287340 | 0.830701 | 2.532762e-55 | -8.615850e-47 |
| Msa0343200 | Msa1293580 | 0.848609 | 5.496322e-60 | -8.615850e-47 |
| Msa0343200 | Msa1294470 | 0.815340 | 9.720318e-52 | -8.615850e-47 |
| Msa0343200 | Msa1295010 | 0.815277 | 1.003957e-51 | -8.615850e-47 |
| Msa0343200 | Msa1296610 | 0.864435 | 1.218847e-64 | -8.615850e-47 |
| Msa0343200 | Msa1299280 | -0.806953 | 6.403568e-50 | -8.615850e-47 |
| Msa0343200 | Msa1299940 | 0.802216 | 6.232371e-49 | -8.615850e-47 |
| Msa0343200 | Msa1300360 | 0.811418 | 7.069941e-51 | -8.615850e-47 |
| Msa0343200 | Msa1304850 | 0.826775 | 2.254771e-54 | -8.615850e-47 |
| Msa0343200 | Msa1308460 | 0.817597 | 3.037197e-52 | -8.615850e-47 |
| Msa0343200 | Msa1317710 | 0.804665 | 1.936766e-49 | -8.615850e-47 |
| Msa0343200 | Msa1326900 | 0.807526 | 4.841321e-50 | -8.615850e-47 |
| Msa0343200 | Msa1328600 | 0.850256 | 1.910208e-60 | -8.615850e-47 |
| Msa0343200 | Msa1329020 | 0.857671 | 1.392722e-62 | -8.615850e-47 |
| Msa0343200 | Msa1329660 | 0.803896 | 2.800711e-49 | -8.615850e-47 |
| Msa0343200 | Msa1329820 | 0.829470 | 5.055711e-55 | -8.615850e-47 |
| Msa0343200 | Msa1329990 | 0.807073 | 6.039728e-50 | -8.615850e-47 |
| Msa0343200 | Msa1330900 | 0.801855 | 7.395434e-49 | -8.615850e-47 |
| Msa0343200 | Msa1339310 | 0.829439 | 5.143692e-55 | -8.615850e-47 |
| Msa0343200 | Msa1346920 | 0.868396 | 6.734796e-66 | -8.615850e-47 |
| Msa0343200 | Msa1352550 | 0.821725 | 3.466632e-53 | -8.615850e-47 |
| Msa0343200 | Msa1353760 | 0.838990 | 2.071095e-57 | -8.615850e-47 |
| Msa0343200 | Msa1356730 | 0.824269 | 8.845585e-54 | -8.615850e-47 |
| Msa0343200 | Msa1357380 | 0.827820 | 1.266451e-54 | -8.615850e-47 |
| Msa0343200 | Msa1363560 | 0.809816 | 1.569153e-50 | -8.615850e-47 |
| Msa0343200 | Msa1366700 | 0.803690 | 3.090189e-49 | -8.615850e-47 |
| Msa0343200 | Msa1368660 | 0.846456 | 2.147683e-59 | -8.615850e-47 |
| Msa0343200 | Msa1373950 | 0.803567 | 3.278165e-49 | -8.615850e-47 |
| Msa0343200 | Msa1381720 | 0.800349 | 1.502633e-48 | -8.615850e-47 |
| Msa0343200 | Msa1384620 | 0.831876 | 1.301536e-55 | -8.615850e-47 |
| Msa0343200 | Msa1386250 | 0.812731 | 3.658467e-51 | -8.615850e-47 |
| Msa0343200 | Msa1388270 | 0.835635 | 1.496429e-56 | -8.615850e-47 |
| Msa0343200 | Msa1391600 | 0.842916 | 1.930805e-58 | -8.615850e-47 |
| Msa0343200 | Msa1395640 | 0.814697 | 1.350300e-51 | -8.615850e-47 |
| Msa0343200 | Msa1395700 | 0.804112 | 2.526101e-49 | -8.615850e-47 |
| Msa0343200 | Msa1397540 | 0.836740 | 7.838846e-57 | -8.615850e-47 |
| Msa0343200 | Msa1397550 | 0.825898 | 3.646750e-54 | -8.615850e-47 |
| Msa0343200 | Msa1410180 | 0.831511 | 1.601440e-55 | -8.615850e-47 |
| Msa0343200 | Msa1413880 | 0.832353 | 9.919954e-56 | -8.615850e-47 |
| Msa0343200 | Msa1431240 | 0.807424 | 5.088313e-50 | -8.615850e-47 |
| Msa0343200 | Msa1432250 | 0.859164 | 4.998701e-63 | -8.615850e-47 |
| Msa0343200 | Msa1433380 | 0.853240 | 2.723462e-61 | -8.615850e-47 |
| Msa0343200 | Msa1439160 | 0.823578 | 1.284447e-53 | -8.615850e-47 |
| Msa0343200 | Msa1440160 | 0.821099 | 4.833355e-53 | -8.615850e-47 |
| Msa0343200 | Msa1443440 | 0.826240 | 3.024055e-54 | -8.615850e-47 |
| Msa0343200 | Msa1445250 | 0.829672 | 4.515945e-55 | -8.615850e-47 |
| Msa0343200 | Msa1445700 | 0.834273 | 3.296908e-56 | -8.615850e-47 |
| Msa0343200 | Msa1446220 | 0.819332 | 1.227717e-52 | -8.615850e-47 |
| Msa0343200 | Msa1450850 | 0.856819 | 2.485145e-62 | -8.615850e-47 |
| Msa0343200 | Msa1451780 | 0.830333 | 3.115828e-55 | -8.615850e-47 |
| Msa0343200 | Msa1456410 | 0.827346 | 1.645947e-54 | -8.615850e-47 |
| Msa0343200 | Msa1457070 | 0.866034 | 3.828189e-65 | -8.615850e-47 |
| Msa0343200 | Msa1457180 | 0.826850 | 2.163629e-54 | -8.615850e-47 |
| Msa0343200 | Msa1459630 | 0.851299 | 9.717607e-61 | -8.615850e-47 |
| Msa0343200 | Msa1460310 | -0.837626 | 4.650586e-57 | -8.615850e-47 |
| Msa0343200 | Msa1460530 | 0.831356 | 1.748400e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343200 | MtrunA17_Chr5g0402201 | 96.314 | 407 | 9 | 3 | 1 | 404 | 1 | 404 | 0.0 | 769 |
| Msa0343200 | MtrunA17_Chr8g0375091 | 54.028 | 422 | 154 | 14 | 9 | 402 | 27 | 436 | 7.25e-136 | 395 |
| Msa0343200 | MtrunA17_Chr1g0153281 | 40.194 | 413 | 199 | 15 | 14 | 403 | 232 | 619 | 1.36e-61 | 209 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343200 | AT1G45207.3 | 37.799 | 418 | 206 | 13 | 1 | 403 | 170 | 548 | 1.00e-61 | 208 |
| Msa0343200 | AT1G45207.2 | 37.352 | 423 | 206 | 14 | 1 | 403 | 171 | 554 | 2.05e-59 | 202 |
| Msa0343200 | AT4G36970.1 | 39.163 | 406 | 174 | 20 | 1 | 366 | 1 | 373 | 2.86e-44 | 159 |
| Msa0343200 | AT1G30320.1 | 25.926 | 351 | 221 | 12 | 64 | 399 | 175 | 501 | 2.07e-11 | 65.9 |
Find 102 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCTTCATCCCCAATTT+TGG | 0.168705 | 3_1:-1213845 | Msa0343200:CDS |
| ATTGGGGATGAAGAAGATTT+TGG | 0.174293 | 3_1:+1213850 | None:intergenic |
| CCATATATCACACATGTTTA+AGG | 0.174717 | 3_1:-1214911 | Msa0343200:five_prime_UTR |
| TTTGGATTCATGGCCAAAAT+TGG | 0.186250 | 3_1:+1213832 | None:intergenic |
| CAGTCTCTGGAGAGCTCATT+TGG | 0.224216 | 3_1:+1213893 | None:intergenic |
| GAAGGACAATACCTTCTAAA+TGG | 0.237584 | 3_1:-1214596 | Msa0343200:CDS |
| CTGATATTGCTGCTTGTTGT+TGG | 0.268841 | 3_1:+1214660 | None:intergenic |
| TGTAGTCCAGTTTCTTCTTC+AGG | 0.280909 | 3_1:-1214552 | Msa0343200:CDS |
| TCTCTGAGTTCCACCCCTTT+TGG | 0.282160 | 3_1:+1214697 | None:intergenic |
| CCTTAAACATGTGTGATATA+TGG | 0.302786 | 3_1:+1214911 | None:intergenic |
| TCTCTGTAGTTTGGTTCCTT+TGG | 0.307911 | 3_1:+1214735 | None:intergenic |
| TTAGAAAGTTGGGAGATAAA+AGG | 0.308842 | 3_1:+1212789 | None:intergenic |
| TTCACTCATTGCTATACTAT+TGG | 0.320190 | 3_1:-1215035 | Msa0343200:five_prime_UTR |
| ATCTAAATTTCTTATCATAT+TGG | 0.340386 | 3_1:-1214865 | Msa0343200:five_prime_UTR |
| TTAAGGAACAAAATCAGTTT+TGG | 0.343547 | 3_1:-1214894 | Msa0343200:five_prime_UTR |
| TGAAAATACTTTCCAAGTCT+TGG | 0.346095 | 3_1:+1213124 | None:intergenic |
| GGTACAGAAGCCCAAGCTTC+AGG | 0.348971 | 3_1:-1213682 | Msa0343200:CDS |
| GCCAACACACCAGTTGTAAA+AGG | 0.362730 | 3_1:+1214393 | None:intergenic |
| GTTGTTCCTTGTGGCACAAT+TGG | 0.366877 | 3_1:+1214489 | None:intergenic |
| TATCCACATGACAATTTGTA+TGG | 0.371024 | 3_1:-1214342 | Msa0343200:CDS |
| AACTTCATACCATGGGAATT+AGG | 0.371290 | 3_1:+1214207 | None:intergenic |
| TCACCAAATATGGCAAAATA+TGG | 0.373430 | 3_1:-1213100 | Msa0343200:CDS |
| TTGGATTCATGGCCAAAATT+GGG | 0.373749 | 3_1:+1213833 | None:intergenic |
| GTGGAAAATACAAGTAGAAT+AGG | 0.375128 | 3_1:+1215118 | None:intergenic |
| TTCAATTCATAGGCCCTACT+TGG | 0.382267 | 3_1:-1212963 | Msa0343200:three_prime_UTR |
| AAATGCAATGTTCACTATCT+AGG | 0.385709 | 3_1:+1212913 | None:intergenic |
| AACCTTAACACCAGTTCAAC+AGG | 0.395348 | 3_1:-1213159 | Msa0343200:CDS |
| CTCCTGTTGAACTGGTGTTA+AGG | 0.398242 | 3_1:+1213157 | None:intergenic |
| AGTCTCTGGAGAGCTCATTT+GGG | 0.405064 | 3_1:+1213894 | None:intergenic |
| CTGTGTCGAACGCGCCTTCG+TGG | 0.408576 | 3_1:-1214257 | Msa0343200:CDS |
| ACATAGCCTGAAGAAGAAAC+TGG | 0.409259 | 3_1:+1214546 | None:intergenic |
| TATTGTCCTTCCACTGTTGA+AGG | 0.414027 | 3_1:+1214608 | None:intergenic |
| AAGTGTTTGACAGATGAAAT+TGG | 0.415236 | 3_1:-1213258 | Msa0343200:intron |
| AGTTTGGTTCCTTTGGACTT+AGG | 0.416458 | 3_1:+1214742 | None:intergenic |
| ACATGCTGCTCCTGTTGAAC+TGG | 0.418177 | 3_1:+1213149 | None:intergenic |
| TGTTGAAGAGAAACAATATC+TGG | 0.419812 | 3_1:+1214369 | None:intergenic |
| TTATCTAACATACTTGGAAC+TGG | 0.427894 | 3_1:+1213627 | None:intergenic |
| AGCAGCATGTTTCCAAGACT+TGG | 0.435400 | 3_1:-1213136 | Msa0343200:CDS |
| TCTGCATCATCCCATTTAGA+AGG | 0.438875 | 3_1:+1214585 | None:intergenic |
| ATTGTCATATTTCAATTCAT+AGG | 0.439553 | 3_1:-1212973 | Msa0343200:three_prime_UTR |
| AGAAGCCCAAGCTTCAGGTT+TGG | 0.453435 | 3_1:-1213677 | Msa0343200:CDS |
| AGTTATGTGTGGACAAGTAT+AGG | 0.455548 | 3_1:+1214992 | None:intergenic |
| TGTTGCTTGTATCAAAAGTC+AGG | 0.456167 | 3_1:-1212828 | Msa0343200:three_prime_UTR |
| GATTCCACTGCGAAATGGTC+TGG | 0.462347 | 3_1:-1214442 | Msa0343200:CDS |
| CAATATCCAAACCTGAAGCT+TGG | 0.467995 | 3_1:+1213671 | None:intergenic |
| CCTACGATTCCACTGCGAAA+TGG | 0.470886 | 3_1:-1214447 | Msa0343200:CDS |
| TGGAAAATACAAGTAGAATA+GGG | 0.473619 | 3_1:+1215119 | None:intergenic |
| ACCATTGAAAGAGCTTAGCT+TGG | 0.475821 | 3_1:+1213723 | None:intergenic |
| AAAGAAGAAATCGTCATCAA+TGG | 0.476995 | 3_1:-1213234 | Msa0343200:CDS |
| TAGCTTGGATGCATAACTCT+TGG | 0.477663 | 3_1:+1213738 | None:intergenic |
| AATATCCAAACCTGAAGCTT+GGG | 0.478511 | 3_1:+1213672 | None:intergenic |
| GTTAGAGATCAAAGATGTGC+AGG | 0.480685 | 3_1:-1213791 | Msa0343200:CDS |
| AAGGACAATACCTTCTAAAT+GGG | 0.483996 | 3_1:-1214595 | Msa0343200:CDS |
| TGGCTTGCAAAGCAGCTGCT+TGG | 0.488792 | 3_1:+1213074 | None:intergenic |
| AGTTCAGTGGTTAATGAGAA+TGG | 0.504775 | 3_1:-1214294 | Msa0343200:CDS |
| GGTTTAATTAATCTTTGTCA+AGG | 0.506522 | 3_1:+1214932 | None:intergenic |
| GGGTGAAACGCCAGCTACAT+AGG | 0.507328 | 3_1:+1214629 | None:intergenic |
| GATAAGAACAATTTGCATTG+AGG | 0.516713 | 3_1:+1215073 | None:intergenic |
| GTCAAGCTAATGTTATTAAG+TGG | 0.521945 | 3_1:-1213762 | Msa0343200:CDS |
| CTCTCCAGAGACTGAAAATG+AGG | 0.524292 | 3_1:-1213884 | Msa0343200:CDS |
| GGCGTTTCACCCTTCAACAG+TGG | 0.525088 | 3_1:-1214618 | Msa0343200:CDS |
| ATGAAGCTAAAATCATTGCA+TGG | 0.527368 | 3_1:-1213498 | Msa0343200:CDS |
| GTTTAATTAATCTTTGTCAA+GGG | 0.528274 | 3_1:+1214933 | None:intergenic |
| GGTAAAGAGTTGAAGAAAAG+TGG | 0.529522 | 3_1:-1213703 | Msa0343200:CDS |
| TGGATTCATGGCCAAAATTG+GGG | 0.539740 | 3_1:+1213834 | None:intergenic |
| AGAAGACAAGCCTATGTAGC+TGG | 0.554075 | 3_1:-1214639 | Msa0343200:CDS |
| CCATGGGAATTAGGCGAAGA+CGG | 0.554746 | 3_1:+1214216 | None:intergenic |
| AAGAACAATTTGCATTGAGG+TGG | 0.556675 | 3_1:+1215076 | None:intergenic |
| TTTACAGATGAGAAATGTGA+TGG | 0.559064 | 3_1:-1213961 | Msa0343200:intron |
| GCAGAAGGCTATTCCAAGTA+GGG | 0.562327 | 3_1:+1212950 | None:intergenic |
| ATACAAGCAACACGTGTGAA+AGG | 0.564835 | 3_1:+1212839 | None:intergenic |
| TCTGGTACCTCTCAGAAACT+AGG | 0.565236 | 3_1:-1214771 | Msa0343200:CDS |
| TCCAAGCTAAGCTCTTTCAA+TGG | 0.565430 | 3_1:-1213724 | Msa0343200:CDS |
| GTATAAATGTAAAGTGCAGA+AGG | 0.566880 | 3_1:+1212935 | None:intergenic |
| AATGGGATGATGCAGAGAGA+TGG | 0.567472 | 3_1:-1214578 | Msa0343200:CDS |
| GTCACATAGTGTTTCTCAAG+AGG | 0.574885 | 3_1:-1214840 | Msa0343200:five_prime_UTR |
| ATTGTCCTTCCACTGTTGAA+GGG | 0.580321 | 3_1:+1214609 | None:intergenic |
| CCGTCTTCGCCTAATTCCCA+TGG | 0.580829 | 3_1:-1214216 | Msa0343200:intron |
| TCACATAGTGTTTCTCAAGA+GGG | 0.581172 | 3_1:-1214839 | Msa0343200:five_prime_UTR |
| TTTCACCCTTCAACAGTGGA+AGG | 0.582839 | 3_1:-1214614 | Msa0343200:CDS |
| ATGAGATTGATCACGGAACA+TGG | 0.590432 | 3_1:+1213054 | None:intergenic |
| AACAATGAGCGCGGTGAATG+TGG | 0.592370 | 3_1:+1215099 | None:intergenic |
| TGAAGCTAAAATCATTGCAT+GGG | 0.598593 | 3_1:-1213497 | Msa0343200:CDS |
| TGCAGAAGGCTATTCCAAGT+AGG | 0.600471 | 3_1:+1212949 | None:intergenic |
| CCATTTCGCAGTGGAATCGT+AGG | 0.604007 | 3_1:+1214447 | None:intergenic |
| GAGTAGTAAGTTGTTCCTTG+TGG | 0.607210 | 3_1:+1214480 | None:intergenic |
| AGCTGCAATTAGAAAACTTG+AGG | 0.609648 | 3_1:-1213449 | Msa0343200:intron |
| CATTGATGATAATAGTTCAG+TGG | 0.616824 | 3_1:-1214307 | Msa0343200:CDS |
| AAAAGAACAAAAGTTATGTG+TGG | 0.617990 | 3_1:+1214981 | None:intergenic |
| AAAACATTGAAAACCAAAAG+GGG | 0.619520 | 3_1:-1214710 | Msa0343200:CDS |
| TGTGTATATGAGATTGATCA+CGG | 0.635634 | 3_1:+1213047 | None:intergenic |
| ACATTGAAAACCAAAAGGGG+TGG | 0.639810 | 3_1:-1214707 | Msa0343200:CDS |
| AGGTTCATTCCTAAGTCCAA+AGG | 0.641804 | 3_1:-1214751 | Msa0343200:CDS |
| GGACCATACAAATTGTCATG+TGG | 0.647753 | 3_1:+1214339 | None:intergenic |
| ACCACCAGACCATTTCGCAG+TGG | 0.650043 | 3_1:+1214438 | None:intergenic |
| TCCACTGCGAAATGGTCTGG+TGG | 0.659097 | 3_1:-1214439 | Msa0343200:CDS |
| AGTGGTCCAATTGTGCCACA+AGG | 0.667585 | 3_1:-1214495 | Msa0343200:CDS |
| GAATGAACCTAGTTTCTGAG+AGG | 0.673385 | 3_1:+1214764 | None:intergenic |
| TTATCATCAATGTCATAACG+TGG | 0.704902 | 3_1:+1214318 | None:intergenic |
| TTACAGATGAGAAATGTGAT+GGG | 0.707865 | 3_1:-1213960 | Msa0343200:intron |
| GAGAGAAGTTCTGACCACGA+AGG | 0.753003 | 3_1:+1214243 | None:intergenic |
| TTGAGGTGGAACAATGAGCG+CGG | 0.764126 | 3_1:+1215090 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTAAATTTCTTATCATAT+TGG | - | chr3_1:1213083-1213102 | Msa0343200:CDS | 15.0% |
| !! | ATCTAAATTTCTTATCATAT+TGG | - | chr3_1:1213083-1213102 | Msa0343200:CDS | 15.0% |
| !!! | TTTGTTCTTTTATATATCGA+TGG | - | chr3_1:1212979-1212998 | Msa0343200:three_prime_UTR | 20.0% |
| !! | GTTTAATTAATCTTTGTCAA+GGG | + | chr3_1:1213018-1213037 | None:intergenic | 20.0% |
| !! | GTTAATATGAAAAAGAATTC+TGG | - | chr3_1:1213159-1213178 | Msa0343200:CDS | 20.0% |
| !! | AAAAAACATTGAAAACCAAA+AGG | - | chr3_1:1213236-1213255 | Msa0343200:CDS | 20.0% |
| !! | AAAAACATTGAAAACCAAAA+GGG | - | chr3_1:1213237-1213256 | Msa0343200:CDS | 20.0% |
| !! | ACAAAAATACTAAACGTTTA+GGG | + | chr3_1:1213968-1213987 | None:intergenic | 20.0% |
| !! | AACAAAAATACTAAACGTTT+AGG | + | chr3_1:1213969-1213988 | None:intergenic | 20.0% |
| !! | TAAATACATAAACACAACAA+TGG | + | chr3_1:1214391-1214410 | None:intergenic | 20.0% |
| !! | AAAAAAACTACAATGAACAT+GGG | + | chr3_1:1214928-1214947 | None:intergenic | 20.0% |
| !! | AAAAAAAACTACAATGAACA+TGG | + | chr3_1:1214929-1214948 | None:intergenic | 20.0% |
| !!! | TGTTCATTGTAGTTTTTTTT+AGG | - | chr3_1:1214929-1214948 | Msa0343200:five_prime_UTR | 20.0% |
| !!! | AGTTTTTTTTAGGTTTTTTC+AGG | - | chr3_1:1214939-1214958 | Msa0343200:five_prime_UTR | 20.0% |
| !! | ATTGTCATATTTCAATTCAT+AGG | - | chr3_1:1214975-1214994 | Msa0343200:five_prime_UTR | 20.0% |
| !!! | TTTGTTCTTTTATATATCGA+TGG | - | chr3_1:1212979-1212998 | Msa0343200:three_prime_UTR | 20.0% |
| !! | GTTTAATTAATCTTTGTCAA+GGG | + | chr3_1:1213018-1213037 | None:intergenic | 20.0% |
| !! | GTTAATATGAAAAAGAATTC+TGG | - | chr3_1:1213159-1213178 | Msa0343200:CDS | 20.0% |
| !! | AAAAAACATTGAAAACCAAA+AGG | - | chr3_1:1213236-1213255 | Msa0343200:CDS | 20.0% |
| !! | AAAAACATTGAAAACCAAAA+GGG | - | chr3_1:1213237-1213256 | Msa0343200:CDS | 20.0% |
| !! | ACAAAAATACTAAACGTTTA+GGG | + | chr3_1:1213968-1213987 | None:intergenic | 20.0% |
| !! | AACAAAAATACTAAACGTTT+AGG | + | chr3_1:1213969-1213988 | None:intergenic | 20.0% |
| !! | TAAATACATAAACACAACAA+TGG | + | chr3_1:1214391-1214410 | None:intergenic | 20.0% |
| !! | AAAAAAACTACAATGAACAT+GGG | + | chr3_1:1214928-1214947 | None:intergenic | 20.0% |
| !! | AAAAAAAACTACAATGAACA+TGG | + | chr3_1:1214929-1214948 | None:intergenic | 20.0% |
| !!! | TGTTCATTGTAGTTTTTTTT+AGG | - | chr3_1:1214929-1214948 | Msa0343200:five_prime_UTR | 20.0% |
| !!! | AGTTTTTTTTAGGTTTTTTC+AGG | - | chr3_1:1214939-1214958 | Msa0343200:five_prime_UTR | 20.0% |
| !! | ATTGTCATATTTCAATTCAT+AGG | - | chr3_1:1214975-1214994 | Msa0343200:five_prime_UTR | 20.0% |
| ! | TGGAAAATACAAGTAGAATA+GGG | + | chr3_1:1212832-1212851 | None:intergenic | 25.0% |
| ! | AAAAGAACAAAAGTTATGTG+TGG | + | chr3_1:1212970-1212989 | None:intergenic | 25.0% |
| ! | GGTTTAATTAATCTTTGTCA+AGG | + | chr3_1:1213019-1213038 | None:intergenic | 25.0% |
| !! | TTAAGGAACAAAATCAGTTT+TGG | - | chr3_1:1213054-1213073 | Msa0343200:exon | 25.0% |
| !!! | ATGTTTTTTTCTCTGTAGTT+TGG | + | chr3_1:1213225-1213244 | None:intergenic | 25.0% |
| ! | AAAACATTGAAAACCAAAAG+GGG | - | chr3_1:1213238-1213257 | Msa0343200:CDS | 25.0% |
| ! | GTCAATGAATTAACTTTCAT+TGG | - | chr3_1:1213833-1213852 | Msa0343200:CDS | 25.0% |
| ! | CAAAAATACTAAACGTTTAG+GGG | + | chr3_1:1213967-1213986 | None:intergenic | 25.0% |
| !! | CCTTTATCAATTTTTGACAT+AGG | + | chr3_1:1214032-1214051 | None:intergenic | 25.0% |
| ! | CCTATGTCAAAAATTGATAA+AGG | - | chr3_1:1214029-1214048 | Msa0343200:intron | 25.0% |
| ! | CATCTATTATCTAACATACT+TGG | + | chr3_1:1214330-1214349 | None:intergenic | 25.0% |
| !! | GTATTTTCATTCACCAAATA+TGG | - | chr3_1:1214838-1214857 | Msa0343200:five_prime_UTR | 25.0% |
| ! | AAAAAACTACAATGAACATG+GGG | + | chr3_1:1214927-1214946 | None:intergenic | 25.0% |
| !!! | TTTTTTCAGGTAAACACAAT+AGG | - | chr3_1:1214952-1214971 | Msa0343200:five_prime_UTR | 25.0% |
| ! | TGGAAAATACAAGTAGAATA+GGG | + | chr3_1:1212832-1212851 | None:intergenic | 25.0% |
| ! | AAAAGAACAAAAGTTATGTG+TGG | + | chr3_1:1212970-1212989 | None:intergenic | 25.0% |
| ! | GGTTTAATTAATCTTTGTCA+AGG | + | chr3_1:1213019-1213038 | None:intergenic | 25.0% |
| !! | TTAAGGAACAAAATCAGTTT+TGG | - | chr3_1:1213054-1213073 | Msa0343200:exon | 25.0% |
| !!! | ATGTTTTTTTCTCTGTAGTT+TGG | + | chr3_1:1213225-1213244 | None:intergenic | 25.0% |
| ! | AAAACATTGAAAACCAAAAG+GGG | - | chr3_1:1213238-1213257 | Msa0343200:CDS | 25.0% |
| ! | GTCAATGAATTAACTTTCAT+TGG | - | chr3_1:1213833-1213852 | Msa0343200:CDS | 25.0% |
| ! | CAAAAATACTAAACGTTTAG+GGG | + | chr3_1:1213967-1213986 | None:intergenic | 25.0% |
| !! | CCTTTATCAATTTTTGACAT+AGG | + | chr3_1:1214032-1214051 | None:intergenic | 25.0% |
| ! | CCTATGTCAAAAATTGATAA+AGG | - | chr3_1:1214029-1214048 | Msa0343200:intron | 25.0% |
| ! | CATCTATTATCTAACATACT+TGG | + | chr3_1:1214330-1214349 | None:intergenic | 25.0% |
| !! | GTATTTTCATTCACCAAATA+TGG | - | chr3_1:1214838-1214857 | Msa0343200:five_prime_UTR | 25.0% |
| ! | AAAAAACTACAATGAACATG+GGG | + | chr3_1:1214927-1214946 | None:intergenic | 25.0% |
| !!! | TTTTTTCAGGTAAACACAAT+AGG | - | chr3_1:1214952-1214971 | Msa0343200:five_prime_UTR | 25.0% |
| GTGGAAAATACAAGTAGAAT+AGG | + | chr3_1:1212833-1212852 | None:intergenic | 30.0% | |
| GATAAGAACAATTTGCATTG+AGG | + | chr3_1:1212878-1212897 | None:intergenic | 30.0% | |
| TTCACTCATTGCTATACTAT+TGG | - | chr3_1:1212913-1212932 | Msa0343200:three_prime_UTR | 30.0% | |
| CCTTAAACATGTGTGATATA+TGG | + | chr3_1:1213040-1213059 | None:intergenic | 30.0% | |
| CCATATATCACACATGTTTA+AGG | - | chr3_1:1213037-1213056 | Msa0343200:three_prime_UTR | 30.0% | |
| AAGGACAATACCTTCTAAAT+GGG | - | chr3_1:1213353-1213372 | Msa0343200:intron | 30.0% | |
| AGAAATCCCAAATCAAAAAG+TGG | - | chr3_1:1213435-1213454 | Msa0343200:intron | 30.0% | |
| !!! | ATTGGACCACTTTTTGATTT+GGG | + | chr3_1:1213444-1213463 | None:intergenic | 30.0% |
| !!! | AATTGGACCACTTTTTGATT+TGG | + | chr3_1:1213445-1213464 | None:intergenic | 30.0% |
| TGTTGAAGAGAAACAATATC+TGG | + | chr3_1:1213582-1213601 | None:intergenic | 30.0% | |
| TATCCACATGACAATTTGTA+TGG | - | chr3_1:1213606-1213625 | Msa0343200:intron | 30.0% | |
| TTATCATCAATGTCATAACG+TGG | + | chr3_1:1213633-1213652 | None:intergenic | 30.0% | |
| ! | CATTGATGATAATAGTTCAG+TGG | - | chr3_1:1213641-1213660 | Msa0343200:CDS | 30.0% |
| TTTACAGATGAGAAATGTGA+TGG | - | chr3_1:1213987-1214006 | Msa0343200:intron | 30.0% | |
| TTACAGATGAGAAATGTGAT+GGG | - | chr3_1:1213988-1214007 | Msa0343200:intron | 30.0% | |
| !! | AAGAAGATTTTGGAGATGAA+TGG | + | chr3_1:1214091-1214110 | None:intergenic | 30.0% |
| ! | TTTTCTGAATGGCAACTTTT+TGG | + | chr3_1:1214137-1214156 | None:intergenic | 30.0% |
| ! | TGATCTCTAACTTTTCTGAA+TGG | + | chr3_1:1214148-1214167 | None:intergenic | 30.0% |
| GTCAAGCTAATGTTATTAAG+TGG | - | chr3_1:1214186-1214205 | Msa0343200:intron | 30.0% | |
| TTATCTAACATACTTGGAAC+TGG | + | chr3_1:1214324-1214343 | None:intergenic | 30.0% | |
| TTTCATTGAGTCAACAAAAG+AGG | - | chr3_1:1214359-1214378 | Msa0343200:CDS | 30.0% | |
| TTCATTGAGTCAACAAAAGA+GGG | - | chr3_1:1214360-1214379 | Msa0343200:CDS | 30.0% | |
| !!! | ATGAACTTTCATTTTGAAGC+AGG | - | chr3_1:1214414-1214433 | Msa0343200:CDS | 30.0% |
| ATGAAGCTAAAATCATTGCA+TGG | - | chr3_1:1214450-1214469 | Msa0343200:CDS | 30.0% | |
| TGAAGCTAAAATCATTGCAT+GGG | - | chr3_1:1214451-1214470 | Msa0343200:CDS | 30.0% | |
| !! | TAATGAAATTGAGTTGGGTT+AGG | + | chr3_1:1214564-1214583 | None:intergenic | 30.0% |
| TAACCCAACTCAATTTCATT+AGG | - | chr3_1:1214563-1214582 | Msa0343200:CDS | 30.0% | |
| GTTCCTAATGAAATTGAGTT+GGG | + | chr3_1:1214569-1214588 | None:intergenic | 30.0% | |
| TGTTCCTAATGAAATTGAGT+TGG | + | chr3_1:1214570-1214589 | None:intergenic | 30.0% | |
| AAGTGTTTGACAGATGAAAT+TGG | - | chr3_1:1214690-1214709 | Msa0343200:CDS | 30.0% | |
| AAAGAAGAAATCGTCATCAA+TGG | - | chr3_1:1214714-1214733 | Msa0343200:CDS | 30.0% | |
| TGAAAATACTTTCCAAGTCT+TGG | + | chr3_1:1214827-1214846 | None:intergenic | 30.0% | |
| TCACCAAATATGGCAAAATA+TGG | - | chr3_1:1214848-1214867 | Msa0343200:five_prime_UTR | 30.0% | |
| ! | AGACCATATTTTGCCATATT+TGG | + | chr3_1:1214854-1214873 | None:intergenic | 30.0% |
| TGTGTATATGAGATTGATCA+CGG | + | chr3_1:1214904-1214923 | None:intergenic | 30.0% | |
| GTATAAATGTAAAGTGCAGA+AGG | + | chr3_1:1215016-1215035 | None:intergenic | 30.0% | |
| AAATGCAATGTTCACTATCT+AGG | + | chr3_1:1215038-1215057 | None:intergenic | 30.0% | |
| GTGGAAAATACAAGTAGAAT+AGG | + | chr3_1:1212833-1212852 | None:intergenic | 30.0% | |
| GATAAGAACAATTTGCATTG+AGG | + | chr3_1:1212878-1212897 | None:intergenic | 30.0% | |
| TTCACTCATTGCTATACTAT+TGG | - | chr3_1:1212913-1212932 | Msa0343200:three_prime_UTR | 30.0% | |
| CCTTAAACATGTGTGATATA+TGG | + | chr3_1:1213040-1213059 | None:intergenic | 30.0% | |
| CCATATATCACACATGTTTA+AGG | - | chr3_1:1213037-1213056 | Msa0343200:three_prime_UTR | 30.0% | |
| AAGGACAATACCTTCTAAAT+GGG | - | chr3_1:1213353-1213372 | Msa0343200:intron | 30.0% | |
| AGAAATCCCAAATCAAAAAG+TGG | - | chr3_1:1213435-1213454 | Msa0343200:intron | 30.0% | |
| !!! | ATTGGACCACTTTTTGATTT+GGG | + | chr3_1:1213444-1213463 | None:intergenic | 30.0% |
| !!! | AATTGGACCACTTTTTGATT+TGG | + | chr3_1:1213445-1213464 | None:intergenic | 30.0% |
| TGTTGAAGAGAAACAATATC+TGG | + | chr3_1:1213582-1213601 | None:intergenic | 30.0% | |
| TATCCACATGACAATTTGTA+TGG | - | chr3_1:1213606-1213625 | Msa0343200:intron | 30.0% | |
| TTATCATCAATGTCATAACG+TGG | + | chr3_1:1213633-1213652 | None:intergenic | 30.0% | |
| ! | CATTGATGATAATAGTTCAG+TGG | - | chr3_1:1213641-1213660 | Msa0343200:CDS | 30.0% |
| TTTACAGATGAGAAATGTGA+TGG | - | chr3_1:1213987-1214006 | Msa0343200:intron | 30.0% | |
| TTACAGATGAGAAATGTGAT+GGG | - | chr3_1:1213988-1214007 | Msa0343200:intron | 30.0% | |
| !! | AAGAAGATTTTGGAGATGAA+TGG | + | chr3_1:1214091-1214110 | None:intergenic | 30.0% |
| ! | TTTTCTGAATGGCAACTTTT+TGG | + | chr3_1:1214137-1214156 | None:intergenic | 30.0% |
| ! | TGATCTCTAACTTTTCTGAA+TGG | + | chr3_1:1214148-1214167 | None:intergenic | 30.0% |
| GTCAAGCTAATGTTATTAAG+TGG | - | chr3_1:1214186-1214205 | Msa0343200:intron | 30.0% | |
| TTATCTAACATACTTGGAAC+TGG | + | chr3_1:1214324-1214343 | None:intergenic | 30.0% | |
| TTTCATTGAGTCAACAAAAG+AGG | - | chr3_1:1214359-1214378 | Msa0343200:CDS | 30.0% | |
| TTCATTGAGTCAACAAAAGA+GGG | - | chr3_1:1214360-1214379 | Msa0343200:CDS | 30.0% | |
| !!! | ATGAACTTTCATTTTGAAGC+AGG | - | chr3_1:1214414-1214433 | Msa0343200:CDS | 30.0% |
| ATGAAGCTAAAATCATTGCA+TGG | - | chr3_1:1214450-1214469 | Msa0343200:CDS | 30.0% | |
| TGAAGCTAAAATCATTGCAT+GGG | - | chr3_1:1214451-1214470 | Msa0343200:CDS | 30.0% | |
| !! | TAATGAAATTGAGTTGGGTT+AGG | + | chr3_1:1214564-1214583 | None:intergenic | 30.0% |
| TAACCCAACTCAATTTCATT+AGG | - | chr3_1:1214563-1214582 | Msa0343200:CDS | 30.0% | |
| GTTCCTAATGAAATTGAGTT+GGG | + | chr3_1:1214569-1214588 | None:intergenic | 30.0% | |
| TGTTCCTAATGAAATTGAGT+TGG | + | chr3_1:1214570-1214589 | None:intergenic | 30.0% | |
| AAGTGTTTGACAGATGAAAT+TGG | - | chr3_1:1214690-1214709 | Msa0343200:CDS | 30.0% | |
| AAAGAAGAAATCGTCATCAA+TGG | - | chr3_1:1214714-1214733 | Msa0343200:CDS | 30.0% | |
| TGAAAATACTTTCCAAGTCT+TGG | + | chr3_1:1214827-1214846 | None:intergenic | 30.0% | |
| TCACCAAATATGGCAAAATA+TGG | - | chr3_1:1214848-1214867 | Msa0343200:five_prime_UTR | 30.0% | |
| ! | AGACCATATTTTGCCATATT+TGG | + | chr3_1:1214854-1214873 | None:intergenic | 30.0% |
| TGTGTATATGAGATTGATCA+CGG | + | chr3_1:1214904-1214923 | None:intergenic | 30.0% | |
| GTATAAATGTAAAGTGCAGA+AGG | + | chr3_1:1215016-1215035 | None:intergenic | 30.0% | |
| AAATGCAATGTTCACTATCT+AGG | + | chr3_1:1215038-1215057 | None:intergenic | 30.0% | |
| AAGAACAATTTGCATTGAGG+TGG | + | chr3_1:1212875-1212894 | None:intergenic | 35.0% | |
| AGTTATGTGTGGACAAGTAT+AGG | + | chr3_1:1212959-1212978 | None:intergenic | 35.0% | |
| TCACATAGTGTTTCTCAAGA+GGG | - | chr3_1:1213109-1213128 | Msa0343200:CDS | 35.0% | |
| GAAGGACAATACCTTCTAAA+TGG | - | chr3_1:1213352-1213371 | Msa0343200:intron | 35.0% | |
| TGGAATCGTAGGTGAAAAAT+TGG | + | chr3_1:1213493-1213512 | None:intergenic | 35.0% | |
| ! | ATGAGTTCTCCTTTTACAAC+TGG | - | chr3_1:1213546-1213565 | Msa0343200:intron | 35.0% |
| AGTTCAGTGGTTAATGAGAA+TGG | - | chr3_1:1213654-1213673 | Msa0343200:CDS | 35.0% | |
| AACTTCATACCATGGGAATT+AGG | + | chr3_1:1213744-1213763 | None:intergenic | 35.0% | |
| AGACTAGAACTTCATACCAT+GGG | + | chr3_1:1213751-1213770 | None:intergenic | 35.0% | |
| AAGACTAGAACTTCATACCA+TGG | + | chr3_1:1213752-1213771 | None:intergenic | 35.0% | |
| ! | ATTGGGGATGAAGAAGATTT+TGG | + | chr3_1:1214101-1214120 | None:intergenic | 35.0% |
| ! | ATCTTCTTCATCCCCAATTT+TGG | - | chr3_1:1214103-1214122 | Msa0343200:intron | 35.0% |
| TTGGATTCATGGCCAAAATT+GGG | + | chr3_1:1214118-1214137 | None:intergenic | 35.0% | |
| TTTGGATTCATGGCCAAAAT+TGG | + | chr3_1:1214119-1214138 | None:intergenic | 35.0% | |
| ! | ATGGCAACTTTTTGGATTCA+TGG | + | chr3_1:1214129-1214148 | None:intergenic | 35.0% |
| GGTAAAGAGTTGAAGAAAAG+TGG | - | chr3_1:1214245-1214264 | Msa0343200:CDS | 35.0% | |
| AATATCCAAACCTGAAGCTT+GGG | + | chr3_1:1214279-1214298 | None:intergenic | 35.0% | |
| AGCTGCAATTAGAAAACTTG+AGG | - | chr3_1:1214499-1214518 | Msa0343200:CDS | 35.0% | |
| CTGAACTGAACATTCTTACA+TGG | - | chr3_1:1214530-1214549 | Msa0343200:CDS | 35.0% | |
| TGTCAAACACTTGCATAATC+AGG | + | chr3_1:1214682-1214701 | None:intergenic | 35.0% | |
| ! | TGTATTTTGCATCGTACATG+AGG | - | chr3_1:1215074-1215093 | Msa0343200:five_prime_UTR | 35.0% |
| ! | TGTTGCTTGTATCAAAAGTC+AGG | - | chr3_1:1215120-1215139 | Msa0343200:five_prime_UTR | 35.0% |
| AAGAACAATTTGCATTGAGG+TGG | + | chr3_1:1212875-1212894 | None:intergenic | 35.0% | |
| AGTTATGTGTGGACAAGTAT+AGG | + | chr3_1:1212959-1212978 | None:intergenic | 35.0% | |
| TCACATAGTGTTTCTCAAGA+GGG | - | chr3_1:1213109-1213128 | Msa0343200:CDS | 35.0% | |
| GAAGGACAATACCTTCTAAA+TGG | - | chr3_1:1213352-1213371 | Msa0343200:intron | 35.0% | |
| TGGAATCGTAGGTGAAAAAT+TGG | + | chr3_1:1213493-1213512 | None:intergenic | 35.0% | |
| ! | ATGAGTTCTCCTTTTACAAC+TGG | - | chr3_1:1213546-1213565 | Msa0343200:intron | 35.0% |
| AGTTCAGTGGTTAATGAGAA+TGG | - | chr3_1:1213654-1213673 | Msa0343200:CDS | 35.0% | |
| AACTTCATACCATGGGAATT+AGG | + | chr3_1:1213744-1213763 | None:intergenic | 35.0% | |
| AGACTAGAACTTCATACCAT+GGG | + | chr3_1:1213751-1213770 | None:intergenic | 35.0% | |
| AAGACTAGAACTTCATACCA+TGG | + | chr3_1:1213752-1213771 | None:intergenic | 35.0% | |
| ! | ATTGGGGATGAAGAAGATTT+TGG | + | chr3_1:1214101-1214120 | None:intergenic | 35.0% |
| ! | ATCTTCTTCATCCCCAATTT+TGG | - | chr3_1:1214103-1214122 | Msa0343200:intron | 35.0% |
| TTGGATTCATGGCCAAAATT+GGG | + | chr3_1:1214118-1214137 | None:intergenic | 35.0% | |
| TTTGGATTCATGGCCAAAAT+TGG | + | chr3_1:1214119-1214138 | None:intergenic | 35.0% | |
| ! | ATGGCAACTTTTTGGATTCA+TGG | + | chr3_1:1214129-1214148 | None:intergenic | 35.0% |
| GGTAAAGAGTTGAAGAAAAG+TGG | - | chr3_1:1214245-1214264 | Msa0343200:CDS | 35.0% | |
| AATATCCAAACCTGAAGCTT+GGG | + | chr3_1:1214279-1214298 | None:intergenic | 35.0% | |
| AGCTGCAATTAGAAAACTTG+AGG | - | chr3_1:1214499-1214518 | Msa0343200:CDS | 35.0% | |
| CTGAACTGAACATTCTTACA+TGG | - | chr3_1:1214530-1214549 | Msa0343200:CDS | 35.0% | |
| TGTCAAACACTTGCATAATC+AGG | + | chr3_1:1214682-1214701 | None:intergenic | 35.0% | |
| ! | TGTATTTTGCATCGTACATG+AGG | - | chr3_1:1215074-1215093 | Msa0343200:five_prime_UTR | 35.0% |
| ! | TGTTGCTTGTATCAAAAGTC+AGG | - | chr3_1:1215120-1215139 | Msa0343200:five_prime_UTR | 35.0% |
| GTCACATAGTGTTTCTCAAG+AGG | - | chr3_1:1213108-1213127 | Msa0343200:CDS | 40.0% | |
| GAATGAACCTAGTTTCTGAG+AGG | + | chr3_1:1213187-1213206 | None:intergenic | 40.0% | |
| AGGTTCATTCCTAAGTCCAA+AGG | - | chr3_1:1213197-1213216 | Msa0343200:CDS | 40.0% | |
| ! | AGTTTGGTTCCTTTGGACTT+AGG | + | chr3_1:1213209-1213228 | None:intergenic | 40.0% |
| ! | TCTCTGTAGTTTGGTTCCTT+TGG | + | chr3_1:1213216-1213235 | None:intergenic | 40.0% |
| ACATTGAAAACCAAAAGGGG+TGG | - | chr3_1:1213241-1213260 | Msa0343200:CDS | 40.0% | |
| !! | CTGATATTGCTGCTTGTTGT+TGG | + | chr3_1:1213291-1213310 | None:intergenic | 40.0% |
| ATTGTCCTTCCACTGTTGAA+GGG | + | chr3_1:1213342-1213361 | None:intergenic | 40.0% | |
| TATTGTCCTTCCACTGTTGA+AGG | + | chr3_1:1213343-1213362 | None:intergenic | 40.0% | |
| TCTGCATCATCCCATTTAGA+AGG | + | chr3_1:1213366-1213385 | None:intergenic | 40.0% | |
| TGTAGTCCAGTTTCTTCTTC+AGG | - | chr3_1:1213396-1213415 | Msa0343200:intron | 40.0% | |
| ACATAGCCTGAAGAAGAAAC+TGG | + | chr3_1:1213405-1213424 | None:intergenic | 40.0% | |
| GAGTAGTAAGTTGTTCCTTG+TGG | + | chr3_1:1213471-1213490 | None:intergenic | 40.0% | |
| ! | TCCTTTTACAACTGGTGTGT+TGG | - | chr3_1:1213554-1213573 | Msa0343200:intron | 40.0% |
| GGACCATACAAATTGTCATG+TGG | + | chr3_1:1213612-1213631 | None:intergenic | 40.0% | |
| ! | GAAGTTCTAGTCTTCTCAGT+TGG | - | chr3_1:1213758-1213777 | Msa0343200:CDS | 40.0% |
| TACTAAACGTTTAGGGGACT+TGG | + | chr3_1:1213961-1213980 | None:intergenic | 40.0% | |
| TGGATTCATGGCCAAAATTG+GGG | + | chr3_1:1214117-1214136 | None:intergenic | 40.0% | |
| GTTAGAGATCAAAGATGTGC+AGG | - | chr3_1:1214157-1214176 | Msa0343200:intron | 40.0% | |
| TAGCTTGGATGCATAACTCT+TGG | + | chr3_1:1214213-1214232 | None:intergenic | 40.0% | |
| TCCAAGCTAAGCTCTTTCAA+TGG | - | chr3_1:1214224-1214243 | Msa0343200:CDS | 40.0% | |
| ACCATTGAAAGAGCTTAGCT+TGG | + | chr3_1:1214228-1214247 | None:intergenic | 40.0% | |
| CAATATCCAAACCTGAAGCT+TGG | + | chr3_1:1214280-1214299 | None:intergenic | 40.0% | |
| GGAGAGTTTGCAAAAAGCAA+AGG | - | chr3_1:1214472-1214491 | Msa0343200:CDS | 40.0% | |
| AACCTTAACACCAGTTCAAC+AGG | - | chr3_1:1214789-1214808 | Msa0343200:exon | 40.0% | |
| ATGAGATTGATCACGGAACA+TGG | + | chr3_1:1214897-1214916 | None:intergenic | 40.0% | |
| TTCAATTCATAGGCCCTACT+TGG | - | chr3_1:1214985-1215004 | Msa0343200:five_prime_UTR | 40.0% | |
| ATACAAGCAACACGTGTGAA+AGG | + | chr3_1:1215112-1215131 | None:intergenic | 40.0% | |
| GTCACATAGTGTTTCTCAAG+AGG | - | chr3_1:1213108-1213127 | Msa0343200:CDS | 40.0% | |
| GAATGAACCTAGTTTCTGAG+AGG | + | chr3_1:1213187-1213206 | None:intergenic | 40.0% | |
| AGGTTCATTCCTAAGTCCAA+AGG | - | chr3_1:1213197-1213216 | Msa0343200:CDS | 40.0% | |
| ! | AGTTTGGTTCCTTTGGACTT+AGG | + | chr3_1:1213209-1213228 | None:intergenic | 40.0% |
| ! | TCTCTGTAGTTTGGTTCCTT+TGG | + | chr3_1:1213216-1213235 | None:intergenic | 40.0% |
| ACATTGAAAACCAAAAGGGG+TGG | - | chr3_1:1213241-1213260 | Msa0343200:CDS | 40.0% | |
| !! | CTGATATTGCTGCTTGTTGT+TGG | + | chr3_1:1213291-1213310 | None:intergenic | 40.0% |
| ATTGTCCTTCCACTGTTGAA+GGG | + | chr3_1:1213342-1213361 | None:intergenic | 40.0% | |
| TATTGTCCTTCCACTGTTGA+AGG | + | chr3_1:1213343-1213362 | None:intergenic | 40.0% | |
| TCTGCATCATCCCATTTAGA+AGG | + | chr3_1:1213366-1213385 | None:intergenic | 40.0% | |
| TGTAGTCCAGTTTCTTCTTC+AGG | - | chr3_1:1213396-1213415 | Msa0343200:intron | 40.0% | |
| ACATAGCCTGAAGAAGAAAC+TGG | + | chr3_1:1213405-1213424 | None:intergenic | 40.0% | |
| GAGTAGTAAGTTGTTCCTTG+TGG | + | chr3_1:1213471-1213490 | None:intergenic | 40.0% | |
| ! | TCCTTTTACAACTGGTGTGT+TGG | - | chr3_1:1213554-1213573 | Msa0343200:intron | 40.0% |
| GGACCATACAAATTGTCATG+TGG | + | chr3_1:1213612-1213631 | None:intergenic | 40.0% | |
| ! | GAAGTTCTAGTCTTCTCAGT+TGG | - | chr3_1:1213758-1213777 | Msa0343200:CDS | 40.0% |
| TACTAAACGTTTAGGGGACT+TGG | + | chr3_1:1213961-1213980 | None:intergenic | 40.0% | |
| TGGATTCATGGCCAAAATTG+GGG | + | chr3_1:1214117-1214136 | None:intergenic | 40.0% | |
| GTTAGAGATCAAAGATGTGC+AGG | - | chr3_1:1214157-1214176 | Msa0343200:intron | 40.0% | |
| TAGCTTGGATGCATAACTCT+TGG | + | chr3_1:1214213-1214232 | None:intergenic | 40.0% | |
| TCCAAGCTAAGCTCTTTCAA+TGG | - | chr3_1:1214224-1214243 | Msa0343200:CDS | 40.0% | |
| ACCATTGAAAGAGCTTAGCT+TGG | + | chr3_1:1214228-1214247 | None:intergenic | 40.0% | |
| CAATATCCAAACCTGAAGCT+TGG | + | chr3_1:1214280-1214299 | None:intergenic | 40.0% | |
| GGAGAGTTTGCAAAAAGCAA+AGG | - | chr3_1:1214472-1214491 | Msa0343200:CDS | 40.0% | |
| AACCTTAACACCAGTTCAAC+AGG | - | chr3_1:1214789-1214808 | Msa0343200:exon | 40.0% | |
| ATGAGATTGATCACGGAACA+TGG | + | chr3_1:1214897-1214916 | None:intergenic | 40.0% | |
| TTCAATTCATAGGCCCTACT+TGG | - | chr3_1:1214985-1215004 | Msa0343200:five_prime_UTR | 40.0% | |
| ATACAAGCAACACGTGTGAA+AGG | + | chr3_1:1215112-1215131 | None:intergenic | 40.0% | |
| TCTGGTACCTCTCAGAAACT+AGG | - | chr3_1:1213177-1213196 | Msa0343200:CDS | 45.0% | |
| AGAAGACAAGCCTATGTAGC+TGG | - | chr3_1:1213309-1213328 | Msa0343200:intron | 45.0% | |
| TTTCACCCTTCAACAGTGGA+AGG | - | chr3_1:1213334-1213353 | Msa0343200:intron | 45.0% | |
| AATGGGATGATGCAGAGAGA+TGG | - | chr3_1:1213370-1213389 | Msa0343200:intron | 45.0% | |
| GTTGTTCCTTGTGGCACAAT+TGG | + | chr3_1:1213462-1213481 | None:intergenic | 45.0% | |
| GCCAACACACCAGTTGTAAA+AGG | + | chr3_1:1213558-1213577 | None:intergenic | 45.0% | |
| TTGAACATCGAAGTCTGCTC+TGG | - | chr3_1:1213915-1213934 | Msa0343200:CDS | 45.0% | |
| ! | AGTCTCTGGAGAGCTCATTT+GGG | + | chr3_1:1214057-1214076 | None:intergenic | 45.0% |
| CTCTCCAGAGACTGAAAATG+AGG | - | chr3_1:1214064-1214083 | Msa0343200:intron | 45.0% | |
| ! | TGGTCCTCATTTTCAGTCTC+TGG | + | chr3_1:1214071-1214090 | None:intergenic | 45.0% |
| CATTAGACCGACAAATGCAG+AGG | - | chr3_1:1214639-1214658 | Msa0343200:CDS | 45.0% | |
| AAAGACGCCTCTGCATTTGT+CGG | + | chr3_1:1214649-1214668 | None:intergenic | 45.0% | |
| ! | CTCCTGTTGAACTGGTGTTA+AGG | + | chr3_1:1214794-1214813 | None:intergenic | 45.0% |
| AGCAGCATGTTTCCAAGACT+TGG | - | chr3_1:1214812-1214831 | Msa0343200:five_prime_UTR | 45.0% | |
| GCAGAAGGCTATTCCAAGTA+GGG | + | chr3_1:1215001-1215020 | None:intergenic | 45.0% | |
| TGCAGAAGGCTATTCCAAGT+AGG | + | chr3_1:1215002-1215021 | None:intergenic | 45.0% | |
| TCTGGTACCTCTCAGAAACT+AGG | - | chr3_1:1213177-1213196 | Msa0343200:CDS | 45.0% | |
| AGAAGACAAGCCTATGTAGC+TGG | - | chr3_1:1213309-1213328 | Msa0343200:intron | 45.0% | |
| TTTCACCCTTCAACAGTGGA+AGG | - | chr3_1:1213334-1213353 | Msa0343200:intron | 45.0% | |
| AATGGGATGATGCAGAGAGA+TGG | - | chr3_1:1213370-1213389 | Msa0343200:intron | 45.0% | |
| GTTGTTCCTTGTGGCACAAT+TGG | + | chr3_1:1213462-1213481 | None:intergenic | 45.0% | |
| GCCAACACACCAGTTGTAAA+AGG | + | chr3_1:1213558-1213577 | None:intergenic | 45.0% | |
| TTGAACATCGAAGTCTGCTC+TGG | - | chr3_1:1213915-1213934 | Msa0343200:CDS | 45.0% | |
| ! | AGTCTCTGGAGAGCTCATTT+GGG | + | chr3_1:1214057-1214076 | None:intergenic | 45.0% |
| CTCTCCAGAGACTGAAAATG+AGG | - | chr3_1:1214064-1214083 | Msa0343200:intron | 45.0% | |
| ! | TGGTCCTCATTTTCAGTCTC+TGG | + | chr3_1:1214071-1214090 | None:intergenic | 45.0% |
| CATTAGACCGACAAATGCAG+AGG | - | chr3_1:1214639-1214658 | Msa0343200:CDS | 45.0% | |
| AAAGACGCCTCTGCATTTGT+CGG | + | chr3_1:1214649-1214668 | None:intergenic | 45.0% | |
| ! | CTCCTGTTGAACTGGTGTTA+AGG | + | chr3_1:1214794-1214813 | None:intergenic | 45.0% |
| AGCAGCATGTTTCCAAGACT+TGG | - | chr3_1:1214812-1214831 | Msa0343200:five_prime_UTR | 45.0% | |
| GCAGAAGGCTATTCCAAGTA+GGG | + | chr3_1:1215001-1215020 | None:intergenic | 45.0% | |
| TGCAGAAGGCTATTCCAAGT+AGG | + | chr3_1:1215002-1215021 | None:intergenic | 45.0% | |
| AACAATGAGCGCGGTGAATG+TGG | + | chr3_1:1212852-1212871 | None:intergenic | 50.0% | |
| TTGAGGTGGAACAATGAGCG+CGG | + | chr3_1:1212861-1212880 | None:intergenic | 50.0% | |
| ! | TCTCTGAGTTCCACCCCTTT+TGG | + | chr3_1:1213254-1213273 | None:intergenic | 50.0% |
| AGTGGTCCAATTGTGCCACA+AGG | - | chr3_1:1213453-1213472 | Msa0343200:CDS | 50.0% | |
| CCATTTCGCAGTGGAATCGT+AGG | + | chr3_1:1213504-1213523 | None:intergenic | 50.0% | |
| CCTACGATTCCACTGCGAAA+TGG | - | chr3_1:1213501-1213520 | Msa0343200:CDS | 50.0% | |
| GATTCCACTGCGAAATGGTC+TGG | - | chr3_1:1213506-1213525 | Msa0343200:CDS | 50.0% | |
| ! | GAGAGAAGTTCTGACCACGA+AGG | + | chr3_1:1213708-1213727 | None:intergenic | 50.0% |
| CCATGGGAATTAGGCGAAGA+CGG | + | chr3_1:1213735-1213754 | None:intergenic | 50.0% | |
| ! | CAGTCTCTGGAGAGCTCATT+TGG | + | chr3_1:1214058-1214077 | None:intergenic | 50.0% |
| ! | AGAAGCCCAAGCTTCAGGTT+TGG | - | chr3_1:1214271-1214290 | Msa0343200:CDS | 50.0% |
| ACATGCTGCTCCTGTTGAAC+TGG | + | chr3_1:1214802-1214821 | None:intergenic | 50.0% | |
| AACAATGAGCGCGGTGAATG+TGG | + | chr3_1:1212852-1212871 | None:intergenic | 50.0% | |
| TTGAGGTGGAACAATGAGCG+CGG | + | chr3_1:1212861-1212880 | None:intergenic | 50.0% | |
| ! | TCTCTGAGTTCCACCCCTTT+TGG | + | chr3_1:1213254-1213273 | None:intergenic | 50.0% |
| AGTGGTCCAATTGTGCCACA+AGG | - | chr3_1:1213453-1213472 | Msa0343200:CDS | 50.0% | |
| CCATTTCGCAGTGGAATCGT+AGG | + | chr3_1:1213504-1213523 | None:intergenic | 50.0% | |
| CCTACGATTCCACTGCGAAA+TGG | - | chr3_1:1213501-1213520 | Msa0343200:CDS | 50.0% | |
| GATTCCACTGCGAAATGGTC+TGG | - | chr3_1:1213506-1213525 | Msa0343200:CDS | 50.0% | |
| ! | GAGAGAAGTTCTGACCACGA+AGG | + | chr3_1:1213708-1213727 | None:intergenic | 50.0% |
| CCATGGGAATTAGGCGAAGA+CGG | + | chr3_1:1213735-1213754 | None:intergenic | 50.0% | |
| ! | CAGTCTCTGGAGAGCTCATT+TGG | + | chr3_1:1214058-1214077 | None:intergenic | 50.0% |
| ! | AGAAGCCCAAGCTTCAGGTT+TGG | - | chr3_1:1214271-1214290 | Msa0343200:CDS | 50.0% |
| ACATGCTGCTCCTGTTGAAC+TGG | + | chr3_1:1214802-1214821 | None:intergenic | 50.0% | |
| GGGTGAAACGCCAGCTACAT+AGG | + | chr3_1:1213322-1213341 | None:intergenic | 55.0% | |
| GGCGTTTCACCCTTCAACAG+TGG | - | chr3_1:1213330-1213349 | Msa0343200:intron | 55.0% | |
| TCCACTGCGAAATGGTCTGG+TGG | - | chr3_1:1213509-1213528 | Msa0343200:CDS | 55.0% | |
| ACCACCAGACCATTTCGCAG+TGG | + | chr3_1:1213513-1213532 | None:intergenic | 55.0% | |
| CCGTCTTCGCCTAATTCCCA+TGG | - | chr3_1:1213732-1213751 | Msa0343200:CDS | 55.0% | |
| GGTACAGAAGCCCAAGCTTC+AGG | - | chr3_1:1214266-1214285 | Msa0343200:CDS | 55.0% | |
| ! | TGGCTTGCAAAGCAGCTGCT+TGG | + | chr3_1:1214877-1214896 | None:intergenic | 55.0% |
| GGGTGAAACGCCAGCTACAT+AGG | + | chr3_1:1213322-1213341 | None:intergenic | 55.0% | |
| GGCGTTTCACCCTTCAACAG+TGG | - | chr3_1:1213330-1213349 | Msa0343200:intron | 55.0% | |
| TCCACTGCGAAATGGTCTGG+TGG | - | chr3_1:1213509-1213528 | Msa0343200:CDS | 55.0% | |
| ACCACCAGACCATTTCGCAG+TGG | + | chr3_1:1213513-1213532 | None:intergenic | 55.0% | |
| CCGTCTTCGCCTAATTCCCA+TGG | - | chr3_1:1213732-1213751 | Msa0343200:CDS | 55.0% | |
| GGTACAGAAGCCCAAGCTTC+AGG | - | chr3_1:1214266-1214285 | Msa0343200:CDS | 55.0% | |
| ! | TGGCTTGCAAAGCAGCTGCT+TGG | + | chr3_1:1214877-1214896 | None:intergenic | 55.0% |
| CTGTGTCGAACGCGCCTTCG+TGG | - | chr3_1:1213691-1213710 | Msa0343200:CDS | 65.0% | |
| CTGTGTCGAACGCGCCTTCG+TGG | - | chr3_1:1213691-1213710 | Msa0343200:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 1212802 | 1215168 | 1212802 | ID=Msa0343200;Name=Msa0343200 |
| chr3_1 | mRNA | 1212802 | 1215168 | 1212802 | ID=Msa0343200-mRNA-1;Parent=Msa0343200;Name=Msa0343200-mRNA-1;_AED=0.15;_eAED=0.15;_QI=363|1|1|1|1|1|4|262|404 |
| chr3_1 | exon | 1212802 | 1213267 | 1212802 | ID=Msa0343200-mRNA-1:exon:457;Parent=Msa0343200-mRNA-1 |
| chr3_1 | exon | 1213450 | 1213534 | 1213450 | ID=Msa0343200-mRNA-1:exon:456;Parent=Msa0343200-mRNA-1 |
| chr3_1 | exon | 1213640 | 1213976 | 1213640 | ID=Msa0343200-mRNA-1:exon:455;Parent=Msa0343200-mRNA-1 |
| chr3_1 | exon | 1214217 | 1215168 | 1214217 | ID=Msa0343200-mRNA-1:exon:454;Parent=Msa0343200-mRNA-1 |
| chr3_1 | five_prime_UTR | 1214806 | 1215168 | 1214806 | ID=Msa0343200-mRNA-1:five_prime_utr;Parent=Msa0343200-mRNA-1 |
| chr3_1 | CDS | 1214217 | 1214805 | 1214217 | ID=Msa0343200-mRNA-1:cds;Parent=Msa0343200-mRNA-1 |
| chr3_1 | CDS | 1213640 | 1213976 | 1213640 | ID=Msa0343200-mRNA-1:cds;Parent=Msa0343200-mRNA-1 |
| chr3_1 | CDS | 1213450 | 1213534 | 1213450 | ID=Msa0343200-mRNA-1:cds;Parent=Msa0343200-mRNA-1 |
| chr3_1 | CDS | 1213064 | 1213267 | 1213064 | ID=Msa0343200-mRNA-1:cds;Parent=Msa0343200-mRNA-1 |
| chr3_1 | three_prime_UTR | 1212802 | 1213063 | 1212802 | ID=Msa0343200-mRNA-1:three_prime_utr;Parent=Msa0343200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
