AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1194110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1194110 MtrunA17_Chr8g0364961 99.416 856 5 0 1 856 1 856 0.0 1766
Msa1194110 MtrunA17_Chr1g0209251 66.627 845 274 2 1 839 1 843 0.0 1191
Msa1194110 MtrunA17_Chr4g0041381 63.466 854 297 3 1 841 1 852 0.0 1150
Msa1194110 MtrunA17_Chr8g0391971 65.258 852 280 7 1 839 1 849 0.0 1149
Msa1194110 MtrunA17_Chr1g0161531 63.934 854 292 6 1 840 1 852 0.0 1131
Msa1194110 MtrunA17_Chr4g0073041 62.247 792 289 5 52 839 55 840 0.0 1036
Msa1194110 MtrunA17_Chr3g0117891 60.053 751 299 1 77 827 3 752 0.0 926
Msa1194110 MtrunA17_Chr3g0107401 54.348 598 243 3 56 653 2 569 0.0 625
Msa1194110 MtrunA17_Chr2g0314621 34.252 762 426 21 52 787 122 834 5.76e-134 423
Msa1194110 MtrunA17_Chr8g0359371 34.165 802 434 23 52 814 83 829 4.23e-132 417
Msa1194110 MtrunA17_Chr8g0380051 37.500 352 186 8 36 374 53 383 2.63e-67 231
Msa1194110 MtrunA17_Chr3g0107421 54.857 175 79 0 246 420 1 175 1.70e-57 194
Msa1194110 MtrunA17_Chr3g0116901 51.955 179 72 4 8 186 6 170 5.98e-52 179
Msa1194110 MtrunA17_Chr8g0380061 30.892 437 248 13 381 800 5 404 2.45e-50 185
Msa1194110 MtrunA17_Chr3g0107411 53.741 147 68 0 437 583 1 147 9.37e-48 167
Msa1194110 MtrunA17_Chr3g0107431 47.458 118 47 2 50 167 7 109 2.45e-28 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1194110 AT1G23870.1 74.510 867 209 3 1 855 1 867 0.0 1370
Msa1194110 AT1G70290.1 72.992 859 225 3 1 855 1 856 0.0 1338
Msa1194110 AT1G60140.6 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1194110 AT1G60140.1 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1194110 AT1G60140.2 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1194110 AT1G60140.5 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1194110 AT1G60140.4 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1194110 AT1G70290.2 68.685 859 224 4 1 855 1 818 0.0 1241
Msa1194110 AT1G60140.3 73.580 757 194 1 1 751 1 757 0.0 1195
Msa1194110 AT4G17770.1 64.852 845 289 2 1 838 1 844 0.0 1177
Msa1194110 AT4G17770.2 64.852 845 289 2 1 838 1 844 0.0 1177
Msa1194110 AT1G68020.2 64.019 856 291 4 1 839 1 856 0.0 1156
Msa1194110 AT1G68020.3 64.019 856 291 4 1 839 1 856 0.0 1156
Msa1194110 AT1G06410.3 63.077 845 296 4 1 837 1 837 0.0 1126
Msa1194110 AT1G06410.1 63.077 845 296 4 1 837 1 837 0.0 1126
Msa1194110 AT1G06410.2 63.077 845 296 4 1 837 1 837 0.0 1126
Msa1194110 AT2G18700.1 60.327 857 326 6 1 851 1 849 0.0 1080
Msa1194110 AT1G68020.1 63.476 679 231 4 1 662 1 679 0.0 915
Msa1194110 AT1G16980.1 35.688 807 458 24 48 834 7 772 7.25e-146 451
Msa1194110 AT4G27550.2 33.052 829 469 22 51 838 2 785 2.45e-133 417
Msa1194110 AT4G27550.1 32.931 829 477 22 52 838 3 794 1.29e-132 416
Msa1194110 AT1G78580.4 33.805 778 432 20 52 800 91 814 2.78e-132 419
Msa1194110 AT1G78580.1 33.805 778 432 20 52 800 91 814 2.78e-132 419
Msa1194110 AT1G78580.2 33.805 778 432 20 52 800 91 814 2.78e-132 419
Msa1194110 AT1G78580.3 33.805 778 432 20 52 800 91 814 2.78e-132 419
Msa1194110 AT1G16980.2 35.266 638 362 18 48 675 7 603 1.46e-118 374

Find 237 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGTGGATCAGATTCTTTC+TGG 0.076554 8_1:-41134146 Msa1194110:three_prime_UTR
ACAACTTCACCCTGCAAATT+TGG 0.106547 8_1:+41135924 None:intergenic
ACATGTATAGTTACATTATT+TGG 0.165580 8_1:-41133932 Msa1194110:three_prime_UTR
TGGGGAATTGGTCTGGGCTT+GGG 0.169334 8_1:-41135345 Msa1194110:CDS
CTGGGGAATTGGTCTGGGCT+TGG 0.187166 8_1:-41135346 Msa1194110:CDS
CAAGATGCAGACCCTGATTT+TGG 0.207528 8_1:-41134792 Msa1194110:CDS
AAGAGGATCAATGAAATTTA+TGG 0.210673 8_1:-41135822 Msa1194110:CDS
ACTATACATGTTTGAAATTT+CGG 0.241341 8_1:+41133944 None:intergenic
ACATCAATTGTTATATTTAC+TGG 0.255436 8_1:-41134040 Msa1194110:three_prime_UTR
CCAAGGGTTATGACTGTTCC+TGG 0.261011 8_1:-41136914 Msa1194110:CDS
GGGGAATTGGTCTGGGCTTG+GGG 0.266295 8_1:-41135344 Msa1194110:CDS
ATAAATCCTGCAAGGGGTTC+AGG 0.270561 8_1:-41135888 Msa1194110:CDS
TTACATACATAATTCTATTA+TGG 0.271576 8_1:-41133909 Msa1194110:three_prime_UTR
TTGAGAATTTCATCCCTTAC+TGG 0.274615 8_1:+41136287 None:intergenic
CTCTAAGCTAAAAGAGATTC+AGG 0.278734 8_1:-41136051 Msa1194110:CDS
CTTCTCTGAGTGGGGCCATC+AGG 0.282889 8_1:-41135557 Msa1194110:CDS
GATGCCATGCAAACCGATTC+AGG 0.283524 8_1:+41134120 None:intergenic
AAAGATAAGAAAGTTATTCT+TGG 0.285155 8_1:-41136020 Msa1194110:CDS
CTGGAATTGGGCAAGATGTT+TGG 0.285774 8_1:+41134292 None:intergenic
GAATCAGATGTTAGTTCTTC+TGG 0.292836 8_1:-41136869 Msa1194110:CDS
GCAAAGATCATTATACTAAA+AGG 0.294692 8_1:-41135371 Msa1194110:CDS
CAAGTGGTCCAGCAATTCTT+TGG 0.301605 8_1:+41134758 None:intergenic
ACCCTAGACAAAAGCTTATT+AGG 0.311946 8_1:+41133837 None:intergenic
ATAACCCTTGGAAGACTTCT+TGG 0.323153 8_1:+41136926 None:intergenic
TGAGAAGGTTCTCTTGAATA+TGG 0.324266 8_1:-41134546 Msa1194110:CDS
TACTCATGATGTGGCATATT+GGG 0.324520 8_1:-41135427 Msa1194110:CDS
TCCCATCATCTGAAATTTAC+CGG 0.324934 8_1:-41136316 Msa1194110:CDS
CAGCAATTCTTTGGCTTGGC+AGG 0.325831 8_1:+41134767 None:intergenic
CAACTTCACCCTGCAAATTT+GGG 0.326749 8_1:+41135925 None:intergenic
CACGAAATCTGGTGGATTAC+CGG 0.327222 8_1:+41134517 None:intergenic
TCCTTCCCTGAACCCCTTGC+AGG 0.330095 8_1:+41135882 None:intergenic
TTTAGTATAATGATCTTTGC+AGG 0.332751 8_1:+41135374 None:intergenic
GCTTGGCAGGAGCCAAAATC+AGG 0.332771 8_1:+41134780 None:intergenic
GTGTGGATCAGATTCTTTCT+GGG 0.339981 8_1:-41134145 Msa1194110:three_prime_UTR
ACTAAAAGGTGCTGGGGAAT+TGG 0.344491 8_1:-41135357 Msa1194110:CDS
TCTCAAAAGAAACCTGGAAT+TGG 0.347950 8_1:+41134279 None:intergenic
AAGGTGCTGGGGAATTGGTC+TGG 0.348234 8_1:-41135352 Msa1194110:CDS
TGGAATTGGGCAAGATGTTT+GGG 0.350397 8_1:+41134293 None:intergenic
CTTGTTGTGTCTGAGTTCAT+TGG 0.350593 8_1:-41135588 Msa1194110:CDS
GAGATATTGATACTGCTAAA+TGG 0.353153 8_1:-41136793 Msa1194110:CDS
CCAATGCACATCACGAAATC+TGG 0.354845 8_1:+41134506 None:intergenic
CGATTTCATCGAGTTAAACT+TGG 0.356832 8_1:-41136359 Msa1194110:CDS
GGGTTCAGGGAAGGATGTTC+AGG 0.357166 8_1:-41135874 Msa1194110:CDS
TTGTTGAATTCGGATTTAAT+TGG 0.359446 8_1:-41136260 Msa1194110:CDS
ATTTGTTTGCGGATCTTGAT+TGG 0.360978 8_1:-41134908 Msa1194110:CDS
TTAAGCACAGATATGACTTC+AGG 0.363121 8_1:+41135174 None:intergenic
GGGATTATTTCTGACCTTGA+TGG 0.367224 8_1:-41136893 Msa1194110:CDS
CTGCCAAGCCAAAGAATTGC+TGG 0.368870 8_1:-41134766 Msa1194110:CDS
TCTCAAAGGATTGTTGAATT+CGG 0.369451 8_1:-41136270 Msa1194110:CDS
CATACAAAAGAACTAGTAGA+AGG 0.371718 8_1:-41135260 Msa1194110:CDS
AATATCGTGTTCATTGTTAG+TGG 0.373245 8_1:-41135129 Msa1194110:CDS
TTCTTTCTGGGCTCCTGAAT+CGG 0.378445 8_1:-41134133 Msa1194110:three_prime_UTR
ATAAGCACTCTTCTCGAAAC+GGG 0.382221 8_1:+41135755 None:intergenic
TTTAGCTTAGAGGATGTAGA+AGG 0.386302 8_1:+41136062 None:intergenic
AGCATATGGGTAGCATATAA+TGG 0.386638 8_1:+41136540 None:intergenic
CAAACATCTTGCCCAATTCC+AGG 0.387739 8_1:-41134291 Msa1194110:CDS
GGGCCATCAGGGTCAATCCC+TGG 0.389275 8_1:-41135545 Msa1194110:CDS
ATAAATTTCATTGATCCTCT+TGG 0.390480 8_1:+41135824 None:intergenic
TAACCCTTGGAAGACTTCTT+GGG 0.392932 8_1:+41136927 None:intergenic
TATGAATTTAGCCCTCAGTA+TGG 0.393080 8_1:-41135499 Msa1194110:CDS
TAACGGCGACGGCGAGATTC+CGG 0.394430 8_1:+41138891 None:intergenic
GCAGCAGAACCCAAATTTGC+AGG 0.398626 8_1:-41135934 Msa1194110:CDS
GATGTTGTAAAGTTGCTTGA+TGG 0.401203 8_1:-41134341 Msa1194110:CDS
CTGCAAACAATATATTTGTA+TGG 0.405626 8_1:+41135675 None:intergenic
GAATCTAAGCGCGGACATAT+AGG 0.407020 8_1:-41136170 Msa1194110:CDS
CTTCTCAGCTACCAAACCTT+TGG 0.411552 8_1:+41134562 None:intergenic
GCCATCTTTCTTGATTATGA+TGG 0.412733 8_1:-41135237 Msa1194110:CDS
ATCATTATACTAAAAGGTGC+TGG 0.413565 8_1:-41135365 Msa1194110:CDS
GGCAGGCCAAACAGCATTGT+TGG 0.415116 8_1:-41134243 Msa1194110:three_prime_UTR
GTTGTTCACCTTCTCTGAGT+GGG 0.416077 8_1:-41135566 Msa1194110:CDS
GTCCGGTAAATTTCAGATGA+TGG 0.420016 8_1:+41136314 None:intergenic
TTCTATTACAATTAAAAGAC+GGG 0.420368 8_1:-41136745 Msa1194110:CDS
ATCACCATGATCTGAGCATA+TGG 0.421283 8_1:+41136526 None:intergenic
CTCAAAAGAAACCTGGAATT+GGG 0.424009 8_1:+41134280 None:intergenic
TGAAATTGCTCAGAGATTAC+TGG 0.424931 8_1:-41136654 Msa1194110:CDS
GTACTCATGATGTGGCATAT+TGG 0.429323 8_1:-41135428 Msa1194110:CDS
TTCTTAAGTGTAAAGGTGTA+TGG 0.435154 8_1:+41133730 None:intergenic
CAAGAGATTCTCTGAATGAA+TGG 0.436703 8_1:-41135101 Msa1194110:CDS
CAATATATTTGTATGGGACT+AGG 0.441769 8_1:+41135682 None:intergenic
CTGCTAAATGGTGTTTCAGT+TGG 0.444648 8_1:-41136781 Msa1194110:CDS
CAAATATATTGTTTGCAGAC+AGG 0.445837 8_1:-41135670 Msa1194110:CDS
CTTTGACCGAGTGCTTTGGC+AGG 0.445978 8_1:-41136501 Msa1194110:CDS
TTTACCGGACTTTGCCAGTA+AGG 0.446014 8_1:-41136301 Msa1194110:CDS
CAGACAGGGAACTGCAAAGC+TGG 0.446931 8_1:-41135655 Msa1194110:CDS
ATGTTAGTTCTTCTGGATGT+CGG 0.447873 8_1:-41136862 Msa1194110:CDS
CTGCAGGTCATGGGGTAGAA+AGG 0.448467 8_1:+41136610 None:intergenic
GAATCGGTTTGCATGGCATC+AGG 0.449527 8_1:-41134117 Msa1194110:three_prime_UTR
GGTGGAATAGCGACTCTGAA+TGG 0.451271 8_1:-41134941 Msa1194110:CDS
ATCGCTTTGACCGAGTGCTT+TGG 0.451315 8_1:-41136505 Msa1194110:CDS
TGCGGATCTTGATTGGAAAC+AGG 0.453319 8_1:-41134901 Msa1194110:CDS
CATATAGGACTTGATTACTT+TGG 0.456053 8_1:-41136155 Msa1194110:CDS
AACGAACCAACAATGCTGTT+TGG 0.456508 8_1:+41134237 None:intergenic
ACAGGGAGTAACCAAAGGTT+TGG 0.457006 8_1:-41134573 Msa1194110:intron
GTTTACATCATGCAAACTGC+TGG 0.460290 8_1:-41135079 Msa1194110:CDS
CCAGATTTCGTGATGTGCAT+TGG 0.463267 8_1:-41134506 Msa1194110:CDS
GGCAAACATGTTGCCGCTGC+AGG 0.463803 8_1:-41136822 Msa1194110:CDS
TGAAGTCAAGGAAAGTGCTT+TGG 0.467204 8_1:-41134826 Msa1194110:CDS
TAAATCCTGCAAGGGGTTCA+GGG 0.467451 8_1:-41135887 Msa1194110:CDS
CACAGATATGACTTCAGGGC+TGG 0.467927 8_1:+41135179 None:intergenic
TGTTAGTTCTTCTGGATGTC+GGG 0.472937 8_1:-41136861 Msa1194110:CDS
CAAAGGTTTGGTAGCTGAGA+AGG 0.472991 8_1:-41134561 Msa1194110:CDS
AGGTGCTGGGGAATTGGTCT+GGG 0.473831 8_1:-41135351 Msa1194110:CDS
CTGTGCTCTCAAAAGAAACC+TGG 0.476062 8_1:+41134273 None:intergenic
AGAGTTATTTCACTTTCTCA+TGG 0.477242 8_1:-41135318 Msa1194110:CDS
CTGCAGTAGAATGCTAGGTC+TGG 0.477809 8_1:-41136198 Msa1194110:CDS
GTTGCATCGTCAATGCTGTA+AGG 0.478965 8_1:-41135716 Msa1194110:CDS
AGTACAAGCAACGATCAATC+AGG 0.478979 8_1:+41133979 None:intergenic
TTCTCTGAGTGGGGCCATCA+GGG 0.481545 8_1:-41135556 Msa1194110:CDS
ATGAATTTAGCCCTCAGTAT+GGG 0.482655 8_1:-41135498 Msa1194110:CDS
CAAGGGTTATGACTGTTCCT+GGG 0.488044 8_1:-41136913 Msa1194110:CDS
CAAAGAATTGCTGGACCACT+TGG 0.490557 8_1:-41134757 Msa1194110:CDS
TCTTGCTGCAGTAGAATGCT+AGG 0.494534 8_1:-41136203 Msa1194110:CDS
AGCAACTGCATCTATATCCC+AGG 0.496254 8_1:+41135527 None:intergenic
GTTGAAGTTCTTAAGTGTAA+AGG 0.497670 8_1:+41133723 None:intergenic
GAGAGCACAGTTTCTTAGGC+AGG 0.499109 8_1:-41134260 Msa1194110:exon
TCCGGTAAATTTCAGATGAT+GGG 0.500703 8_1:+41136315 None:intergenic
TCAAATTATAAATCCTGCAA+GGG 0.500735 8_1:-41135895 Msa1194110:CDS
TCTGTATACGACTGCATGAC+AGG 0.500792 8_1:+41134870 None:intergenic
GGTCCAGCAATTCTTTGGCT+TGG 0.501011 8_1:+41134763 None:intergenic
GGCTCCTGAATCGGTTTGCA+TGG 0.501103 8_1:-41134124 Msa1194110:three_prime_UTR
ACCCAAACAAAATCATCATC+GGG 0.501271 8_1:+41136425 None:intergenic
TGCTAAATGGTGTTTCAGTT+GGG 0.502656 8_1:-41136780 Msa1194110:CDS
CATCCCTTACTGGCAAAGTC+CGG 0.504874 8_1:+41136297 None:intergenic
CTCTTGAATATGGTTAATGC+CGG 0.507275 8_1:-41134536 Msa1194110:CDS
GCCGTCGCCGTTACCGTCGC+CGG 0.507426 8_1:-41138881 Msa1194110:intron
ACAAAATCGCACTATTCGTC+AGG 0.512499 8_1:+41134170 None:intergenic
ATTCTATTACAATTAAAAGA+CGG 0.514519 8_1:-41136746 Msa1194110:CDS
AATAAGCACTCTTCTCGAAA+CGG 0.515130 8_1:+41135754 None:intergenic
CTACCCATATGCTCAGATCA+TGG 0.515637 8_1:-41136530 Msa1194110:CDS
AACCCAAACAAAATCATCAT+CGG 0.516929 8_1:+41136424 None:intergenic
TCGTGTTCATTGTTAGTGGA+AGG 0.517631 8_1:-41135125 Msa1194110:CDS
GAACCAGCAATTGTTAAAAG+AGG 0.517681 8_1:-41134717 Msa1194110:CDS
ACAGATATGACTTCAGGGCT+GGG 0.520588 8_1:+41135180 None:intergenic
GTGGAATAGCGACTCTGAAT+GGG 0.520863 8_1:-41134940 Msa1194110:CDS
AAATATATTGTTTGCAGACA+GGG 0.522683 8_1:-41135669 Msa1194110:CDS
ATGGTGTTTCAGTTGGGATG+AGG 0.523696 8_1:-41136774 Msa1194110:CDS
TAAGCACAGATATGACTTCA+GGG 0.524391 8_1:+41135175 None:intergenic
GGCCATCAGGGTCAATCCCT+GGG 0.525071 8_1:-41135544 Msa1194110:CDS
GAAGGTTGACGTGTGGTTCG+TGG 0.526824 8_1:-41134095 Msa1194110:three_prime_UTR
GTTCTTCTGGATGTCGGGAG+CGG 0.526826 8_1:-41136856 Msa1194110:CDS
TCATTATACTAAAAGGTGCT+GGG 0.528112 8_1:-41135364 Msa1194110:CDS
TGCTGATACAATATGGTCAA+TGG 0.528241 8_1:+41135281 None:intergenic
GGAAACAAGTCATTTGTTTG+CGG 0.528499 8_1:-41134919 Msa1194110:CDS
TTCAAATTATAAATCCTGCA+AGG 0.529329 8_1:-41135896 Msa1194110:CDS
CGACGGCGAGATTCCGGTGA+GGG 0.532400 8_1:+41138897 None:intergenic
ATCGTCAATGCTGTAAGGGA+TGG 0.532615 8_1:-41135711 Msa1194110:CDS
TGGATCTAATATTGAAGTCA+AGG 0.535654 8_1:-41134838 Msa1194110:CDS
CATTGTTGGTTCGTTATGCG+AGG 0.536774 8_1:-41134229 Msa1194110:three_prime_UTR
TGAGATAGATGCTAGTGAGC+AGG 0.537498 8_1:-41136678 Msa1194110:CDS
CCAGGAACAGTCATAACCCT+TGG 0.540553 8_1:+41136914 None:intergenic
CACTACGCGTTTCCCCTCAC+CGG 0.541446 8_1:-41138910 Msa1194110:five_prime_UTR
GCTTAACTTCAACAATATGC+TGG 0.541548 8_1:+41134694 None:intergenic
CAATCTGAAATTTCTAGCTG+TGG 0.541729 8_1:-41135967 Msa1194110:CDS
GAACTTACCGGCGACGGTAA+CGG 0.543690 8_1:+41138874 None:intergenic
GCCATCATAATCAAGAAAGA+TGG 0.544414 8_1:+41135236 None:intergenic
TTGTTCACCTTCTCTGAGTG+GGG 0.546280 8_1:-41135565 Msa1194110:CDS
TATTGTTGAAGTTAAGCCAC+AGG 0.548984 8_1:-41134688 Msa1194110:intron
CAGATATGACTTCAGGGCTG+GGG 0.549497 8_1:+41135181 None:intergenic
CTGGGACTTGCAGCTGAACA+TGG 0.550416 8_1:-41135060 Msa1194110:CDS
AATCGTTTCCTCAAGAAAGT+AGG 0.550967 8_1:+41136377 None:intergenic
TAAGAAAGTTATTCTTGGTG+TGG 0.551636 8_1:-41136015 Msa1194110:CDS
TGAATTTAGCCCTCAGTATG+GGG 0.553092 8_1:-41135497 Msa1194110:CDS
TGCAAACAATATATTTGTAT+GGG 0.553617 8_1:+41135676 None:intergenic
GGAAGACTTCTTGGGGTGTG+AGG 0.553746 8_1:+41136935 None:intergenic
TGCAAAGCTGGATGAAGCTG+TGG 0.555064 8_1:-41135643 Msa1194110:CDS
ACTGGTGCTTCATTGAGCAT+CGG 0.556417 8_1:-41134022 Msa1194110:three_prime_UTR
TTACCGGACTTTGCCAGTAA+GGG 0.558832 8_1:-41136300 Msa1194110:CDS
CATAAGCCTGCCAAAGCACT+CGG 0.561670 8_1:+41136495 None:intergenic
AATCTATGTGGGTTCGCTCA+AGG 0.563455 8_1:-41136702 Msa1194110:CDS
TGATACTGAGGTAATCTATG+TGG 0.564061 8_1:-41136714 Msa1194110:CDS
TCACCATGATCTGAGCATAT+GGG 0.565672 8_1:+41136527 None:intergenic
ACCGGCGACGGTAACGGCGA+CGG 0.567252 8_1:+41138880 None:intergenic
GAGCGGTCAATGATAATGAC+TGG 0.567271 8_1:+41135783 None:intergenic
TCAAGGTCAGAAATAATCCC+AGG 0.567364 8_1:+41136896 None:intergenic
CGTGTTCATTGTTAGTGGAA+GGG 0.567716 8_1:-41135124 Msa1194110:CDS
TCCTGCAAGGGGTTCAGGGA+AGG 0.568476 8_1:-41135883 Msa1194110:CDS
GGTTGTTCACCTTCTCTGAG+TGG 0.569153 8_1:-41135567 Msa1194110:CDS
GATTTCATCGAGTTAAACTT+GGG 0.570858 8_1:-41136358 Msa1194110:CDS
CAGGATTTATAATTTGAACA+AGG 0.572858 8_1:+41135901 None:intergenic
AATATTTGCAGACAAAGTCA+TGG 0.573166 8_1:-41136459 Msa1194110:CDS
GATACTGAGGTAATCTATGT+GGG 0.575365 8_1:-41136713 Msa1194110:CDS
TATTCTTGGTGTGGACGACA+TGG 0.577773 8_1:-41136006 Msa1194110:CDS
AGATATGACTTCAGGGCTGG+GGG 0.578681 8_1:+41135182 None:intergenic
CATATCGATAGTGTTTCTCA+TGG 0.584215 8_1:+41135454 None:intergenic
TCTTTACAGGGAGTAACCAA+AGG 0.585367 8_1:-41134578 Msa1194110:intron
TTTGATTTGTTGAGGTAGCG+AGG 0.586241 8_1:+41134318 None:intergenic
CGGTAGGAATTCACATGGGT+AGG 0.588120 8_1:-41136106 Msa1194110:CDS
ATCCCAGGGATTGACCCTGA+TGG 0.588505 8_1:+41135542 None:intergenic
ATACAAAAGAACTAGTAGAA+GGG 0.590862 8_1:-41135259 Msa1194110:CDS
AACCCTTGGAAGACTTCTTG+GGG 0.592251 8_1:+41136928 None:intergenic
TCGTATACAGAAGCAACTGA+TGG 0.593251 8_1:-41134858 Msa1194110:CDS
ATTGTTGGTTCGTTATGCGA+GGG 0.595063 8_1:-41134228 Msa1194110:three_prime_UTR
ACACCCCAAGAAGTCTTCCA+AGG 0.595682 8_1:-41136931 Msa1194110:CDS
CTACCCATGTGAATTCCTAC+CGG 0.597503 8_1:+41136107 None:intergenic
CGGTTTGCATGGCATCAGGA+AGG 0.601497 8_1:-41134113 Msa1194110:three_prime_UTR
ATGATGGGAAAGGACTATGA+AGG 0.602097 8_1:+41136330 None:intergenic
AAGCTTATTTAATTGCCAAG+AGG 0.604527 8_1:-41135839 Msa1194110:CDS
CGGGAGCTGATGGTAACGAC+GGG 0.607532 8_1:+41134429 None:intergenic
TAAATTTCAGATGATGGGAA+AGG 0.607697 8_1:+41136320 None:intergenic
GTAAGGGATGAAATTCTCAA+AGG 0.608917 8_1:-41136284 Msa1194110:CDS
CAAATTATAAATCCTGCAAG+GGG 0.610053 8_1:-41135894 Msa1194110:CDS
TTTACATCATGCAAACTGCT+GGG 0.611466 8_1:-41135078 Msa1194110:CDS
TGGAAAGAACAAAATGAGAA+CGG 0.611607 8_1:+41138977 None:intergenic
ATGCACATCACGAAATCTGG+TGG 0.613992 8_1:+41134509 None:intergenic
CTGATGGCCCCACTCAGAGA+AGG 0.614227 8_1:+41135558 None:intergenic
TGATGTGCATTGGAGATGAT+AGG 0.616649 8_1:-41134496 Msa1194110:CDS
CATTATACTAAAAGGTGCTG+GGG 0.617606 8_1:-41135363 Msa1194110:CDS
CAGCAGAACCCAAATTTGCA+GGG 0.618312 8_1:-41135933 Msa1194110:CDS
TAACATCTGATTCACCATCA+AGG 0.622114 8_1:+41136879 None:intergenic
ATATGTTAGTACTCATGATG+TGG 0.622726 8_1:-41135436 Msa1194110:CDS
CAGGTCATGGGGTAGAAAGG+TGG 0.624978 8_1:+41136613 None:intergenic
ACTGGATGACTTTAATTGCG+TGG 0.625192 8_1:-41136636 Msa1194110:CDS
CTTGGCAGGAGCCAAAATCA+GGG 0.629827 8_1:+41134781 None:intergenic
TCGTCAATGCTGTAAGGGAT+GGG 0.634025 8_1:-41135710 Msa1194110:CDS
GAATTTAGCCCTCAGTATGG+GGG 0.635859 8_1:-41135496 Msa1194110:CDS
GGTAGGTAGGAAGCCTAGCA+AGG 0.637239 8_1:-41134390 Msa1194110:CDS
GGTAGCATATAATGGAAGAG+AGG 0.639482 8_1:+41136548 None:intergenic
AAGTAGGCAAAATCATCAAG+TGG 0.641749 8_1:+41136393 None:intergenic
CACCCCAAGAAGTCTTCCAA+GGG 0.641869 8_1:-41136930 Msa1194110:CDS
GCAACTGCATCTATATCCCA+GGG 0.642398 8_1:+41135528 None:intergenic
GACGGCGAGATTCCGGTGAG+GGG 0.645080 8_1:+41138898 None:intergenic
GAGTTTGAACTTACCGGCGA+CGG 0.649294 8_1:+41138868 None:intergenic
TCAAGGAAAGTGCTTTGGTG+TGG 0.650646 8_1:-41134821 Msa1194110:CDS
TAGCAAGAACACTTTCCAAG+TGG 0.651389 8_1:+41134742 None:intergenic
TCGGGAGCTGATGGTAACGA+CGG 0.659800 8_1:+41134428 None:intergenic
TTTGCCGGTAGGAATTCACA+TGG 0.662631 8_1:-41136111 Msa1194110:CDS
TTGCATCGTCAATGCTGTAA+GGG 0.663687 8_1:-41135715 Msa1194110:CDS
TAAGCACTCTTCTCGAAACG+GGG 0.682811 8_1:+41135756 None:intergenic
GCAAAGCTGGATGAAGCTGT+GGG 0.684464 8_1:-41135642 Msa1194110:CDS
ACAACAAGCATGCTTGTACG+AGG 0.685754 8_1:+41135603 None:intergenic
TCGGGAGCGGAAAATCATTG+TGG 0.689766 8_1:-41136843 Msa1194110:CDS
TCTCGAAACGGGGAACAGAG+CGG 0.692951 8_1:+41135766 None:intergenic
GGATCTTGATTGGAAACAGG+TGG 0.695331 8_1:-41134898 Msa1194110:CDS
GCATCAGGAAGGTTGACGTG+TGG 0.697540 8_1:-41134102 Msa1194110:three_prime_UTR
CTGGACTATGAATCTAAGCG+CGG 0.708845 8_1:-41136179 Msa1194110:CDS
GCGACGGCGAGATTCCGGTG+AGG 0.729729 8_1:+41138896 None:intergenic
TTGCCGGTAGGAATTCACAT+GGG 0.730503 8_1:-41136110 Msa1194110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTATTTTTGGTT+TGG - chr8_1:41134332-41134351 Msa1194110:CDS 10.0%
!!! GGAAAATTTTAATTTGATTT+TGG - chr8_1:41134384-41134403 Msa1194110:CDS 15.0%
!! TGTACATGTTATTATAAATT+TGG - chr8_1:41134587-41134606 Msa1194110:intron 15.0%
!! ATTATAAATTTGGAAAATGA+TGG - chr8_1:41134597-41134616 Msa1194110:intron 15.0%
!! TTAAACAAAGTAACTTTAAT+TGG + chr8_1:41135104-41135123 None:intergenic 15.0%
!!! AAAGTTACTTTGTTTAATTT+TGG - chr8_1:41135107-41135126 Msa1194110:CDS 15.0%
!! AAATGAATGAATTATTACAA+GGG - chr8_1:41135468-41135487 Msa1194110:CDS 15.0%
!!! TAGTATGTTAAATTTTTACA+TGG - chr8_1:41135539-41135558 Msa1194110:CDS 15.0%
!! ATTCTATTACAATTAAAAGA+CGG - chr8_1:41135925-41135944 Msa1194110:CDS 15.0%
!!! AAATTTTGATAAATATAGTG+CGG + chr8_1:41136542-41136561 None:intergenic 15.0%
!!! TATATTTATCAAAATTTTGC+CGG - chr8_1:41136545-41136564 Msa1194110:CDS 15.0%
!!! GTTTTATTAATATAAGATTG+TGG + chr8_1:41137470-41137489 None:intergenic 15.0%
!!! ATTTTTTTCTATTTTTTGGT+GGG + chr8_1:41137682-41137701 None:intergenic 15.0%
!!! TATTTTTTTCTATTTTTTGG+TGG + chr8_1:41137683-41137702 None:intergenic 15.0%
!!! TAATGTATTTTTTTATTTGC+AGG - chr8_1:41137709-41137728 Msa1194110:intron 15.0%
!! TTACATACATAATTCTATTA+TGG - chr8_1:41138762-41138781 Msa1194110:intron 15.0%
!! CAACAATTGAATTGAAAAAA+CGG + chr8_1:41133894-41133913 None:intergenic 20.0%
!!! ATATTATTTTTCATCGTGTT+TGG - chr8_1:41134162-41134181 Msa1194110:three_prime_UTR 20.0%
!! GTAAATAAAATTATTGGGTT+TGG + chr8_1:41134199-41134218 None:intergenic 20.0%
!! ACTTTGTGAAAAAAAAATTG+TGG - chr8_1:41134305-41134324 Msa1194110:CDS 20.0%
!! AGGTTAAGATAATTGAAATA+GGG - chr8_1:41134363-41134382 Msa1194110:CDS 20.0%
!! AAAAAATTACATCTTACAAG+TGG + chr8_1:41134852-41134871 None:intergenic 20.0%
!!! TTTTTGTTTTCATGTTTACA+TGG - chr8_1:41134887-41134906 Msa1194110:CDS 20.0%
!! TAAAAAGTAAAACACTTACA+GGG + chr8_1:41134975-41134994 None:intergenic 20.0%
!! TCAAGCATTTATTTCATTAT+AGG + chr8_1:41135136-41135155 None:intergenic 20.0%
!! GTAATAATTCATTCATTTCA+GGG + chr8_1:41135466-41135485 None:intergenic 20.0%
!! TGTAATAATTCATTCATTTC+AGG + chr8_1:41135467-41135486 None:intergenic 20.0%
!! GAAATGAATGAATTATTACA+AGG - chr8_1:41135467-41135486 Msa1194110:CDS 20.0%
!! TTCTATTACAATTAAAAGAC+GGG - chr8_1:41135926-41135945 Msa1194110:CDS 20.0%
!! AAAGATAAGAAAGTTATTCT+TGG - chr8_1:41136651-41136670 Msa1194110:CDS 20.0%
!! TGCAAACAATATATTTGTAT+GGG + chr8_1:41136998-41137017 None:intergenic 20.0%
!!! TTTTTTTCTATTTTTTGGTG+GGG + chr8_1:41137681-41137700 None:intergenic 20.0%
!! ACATCAATTGTTATATTTAC+TGG - chr8_1:41138631-41138650 Msa1194110:intron 20.0%
!!! ACTATACATGTTTGAAATTT+CGG + chr8_1:41138730-41138749 None:intergenic 20.0%
!! ACATGTATAGTTACATTATT+TGG - chr8_1:41138739-41138758 Msa1194110:intron 20.0%
!! TACTCATTTTCTAAACTCTT+TGG - chr8_1:41133918-41133937 Msa1194110:three_prime_UTR 25.0%
! ATAGTAAACGATGAACAATT+TGG + chr8_1:41134040-41134059 None:intergenic 25.0%
! TTCACAAAGTGTAAACTTAT+AGG + chr8_1:41134295-41134314 None:intergenic 25.0%
!!! TTTTTGGTTTGGATAATAAC+AGG - chr8_1:41134343-41134362 Msa1194110:CDS 25.0%
! CAGGTTAAGATAATTGAAAT+AGG - chr8_1:41134362-41134381 Msa1194110:CDS 25.0%
!! TGGTTTAGATAAGTTTTTGT+TGG - chr8_1:41134404-41134423 Msa1194110:CDS 25.0%
!! GGTTTAGATAAGTTTTTGTT+GGG - chr8_1:41134405-41134424 Msa1194110:CDS 25.0%
!! GTTTAGATAAGTTTTTGTTG+GGG - chr8_1:41134406-41134425 Msa1194110:CDS 25.0%
!!! GGTTTTTTTTCAGAAGAAAA+AGG - chr8_1:41134440-41134459 Msa1194110:CDS 25.0%
!!! TTTTTTTCAGAAGAAAAAGG+TGG - chr8_1:41134443-41134462 Msa1194110:CDS 25.0%
! GTATAATTGATGAATGTACT+TGG - chr8_1:41134470-41134489 Msa1194110:CDS 25.0%
!! TGTACTTGGATTGAAATTTT+TGG - chr8_1:41134484-41134503 Msa1194110:CDS 25.0%
! ACATCCAAAAAAACACATAA+TGG + chr8_1:41134511-41134530 None:intergenic 25.0%
!!! ATTATGTGTTTTTTTGGATG+TGG - chr8_1:41134510-41134529 Msa1194110:CDS 25.0%
!!! ATAAAGTGTTTCTTTTTCTG+TGG - chr8_1:41134561-41134580 Msa1194110:CDS 25.0%
! ATTATCTATCATGTTCAAAG+TGG - chr8_1:41134749-41134768 Msa1194110:CDS 25.0%
!!! TTCAAAGTGGTTTAAGTTTT+CGG - chr8_1:41134762-41134781 Msa1194110:CDS 25.0%
! CCAAATGAATATCATGTAAA+AGG + chr8_1:41134916-41134935 None:intergenic 25.0%
!! CCTTTTACATGATATTCATT+TGG - chr8_1:41134913-41134932 Msa1194110:CDS 25.0%
! GTAAAAAGTAAAACACTTAC+AGG + chr8_1:41134976-41134995 None:intergenic 25.0%
!!! TTTTTTCCACTAGATGAAAA+TGG + chr8_1:41135000-41135019 None:intergenic 25.0%
! TTAACATACTACATCTTACA+TGG + chr8_1:41135530-41135549 None:intergenic 25.0%
! ATCCTACGAATAATATATCA+CGG + chr8_1:41135569-41135588 None:intergenic 25.0%
! ACAGATTAACACAACATTTA+CGG + chr8_1:41135597-41135616 None:intergenic 25.0%
! TTGTTGAATTCGGATTTAAT+TGG - chr8_1:41136411-41136430 Msa1194110:CDS 25.0%
! CAGGATTTATAATTTGAACA+AGG + chr8_1:41136773-41136792 None:intergenic 25.0%
! TTCAAATTATAAATCCTGCA+AGG - chr8_1:41136775-41136794 Msa1194110:CDS 25.0%
! TCAAATTATAAATCCTGCAA+GGG - chr8_1:41136776-41136795 Msa1194110:CDS 25.0%
! ATAAATTTCATTGATCCTCT+TGG + chr8_1:41136850-41136869 None:intergenic 25.0%
! AAGAGGATCAATGAAATTTA+TGG - chr8_1:41136849-41136868 Msa1194110:CDS 25.0%
! CTGCAAACAATATATTTGTA+TGG + chr8_1:41136999-41137018 None:intergenic 25.0%
! AAATATATTGTTTGCAGACA+GGG - chr8_1:41137002-41137021 Msa1194110:exon 25.0%
! TTTAGTATAATGATCTTTGC+AGG + chr8_1:41137300-41137319 None:intergenic 25.0%
! GCAAAGATCATTATACTAAA+AGG - chr8_1:41137300-41137319 Msa1194110:intron 25.0%
!! TTTTGTATGCTGATACAATA+TGG + chr8_1:41137400-41137419 None:intergenic 25.0%
! ATACAAAAGAACTAGTAGAA+GGG - chr8_1:41137412-41137431 Msa1194110:intron 25.0%
!! AACAATGAACACGATATTTT+TGG + chr8_1:41137540-41137559 None:intergenic 25.0%
!!! TGTATTTTTTTATTTGCAGG+TGG - chr8_1:41137712-41137731 Msa1194110:intron 25.0%
!! TCATGAATTTTCTCTTTACA+GGG - chr8_1:41138081-41138100 Msa1194110:intron 25.0%
! TAAAAAAATTCAAGTGAGTC+TGG - chr8_1:41138981-41139000 Msa1194110:five_prime_UTR 25.0%
TGGAAAGAACAAAATGAGAA+CGG + chr8_1:41133697-41133716 None:intergenic 30.0%
AAATCTTCAGTAGTGAAAAG+TGG + chr8_1:41133846-41133865 None:intergenic 30.0%
!!! TGGACCATTATGTGTTTTTT+TGG - chr8_1:41134504-41134523 Msa1194110:CDS 30.0%
AAAATGATGGCACATGAATT+TGG - chr8_1:41134610-41134629 Msa1194110:intron 30.0%
TGTCTGTAATAGTAGTTTAG+AGG - chr8_1:41134719-41134738 Msa1194110:CDS 30.0%
! TTTACACCATTTTCATCTAG+TGG - chr8_1:41134991-41135010 Msa1194110:intron 30.0%
! ACATGATTAAGTGTTGTTAG+TGG - chr8_1:41135037-41135056 Msa1194110:intron 30.0%
AATTGGAATCAGCAAAAACA+AGG + chr8_1:41135087-41135106 None:intergenic 30.0%
AATAAACAACGCAATTCAGA+TGG + chr8_1:41135373-41135392 None:intergenic 30.0%
!!! CTAGCTTGTTTTCATATTGT+AGG + chr8_1:41135436-41135455 None:intergenic 30.0%
TCCTACGAATAATATATCAC+GGG + chr8_1:41135568-41135587 None:intergenic 30.0%
GAGATATTGATACTGCTAAA+TGG - chr8_1:41135878-41135897 Msa1194110:CDS 30.0%
AATATTTGCAGACAAAGTCA+TGG - chr8_1:41136212-41136231 Msa1194110:CDS 30.0%
AACCCAAACAAAATCATCAT+CGG + chr8_1:41136250-41136269 None:intergenic 30.0%
GATTTCATCGAGTTAAACTT+GGG - chr8_1:41136313-41136332 Msa1194110:CDS 30.0%
!! TAAATTTCAGATGATGGGAA+AGG + chr8_1:41136354-41136373 None:intergenic 30.0%
TCTCAAAGGATTGTTGAATT+CGG - chr8_1:41136401-41136420 Msa1194110:CDS 30.0%
CATATAGGACTTGATTACTT+TGG - chr8_1:41136516-41136535 Msa1194110:CDS 30.0%
! TTTATCAAAATTTTGCCGGT+AGG - chr8_1:41136549-41136568 Msa1194110:CDS 30.0%
TAAGAAAGTTATTCTTGGTG+TGG - chr8_1:41136656-41136675 Msa1194110:CDS 30.0%
!! GACGACATGGATATTTTTAA+GGG - chr8_1:41136678-41136697 Msa1194110:CDS 30.0%
CAAATTATAAATCCTGCAAG+GGG - chr8_1:41136777-41136796 Msa1194110:CDS 30.0%
AAGCTTATTTAATTGCCAAG+AGG - chr8_1:41136832-41136851 Msa1194110:CDS 30.0%
CAATATATTTGTATGGGACT+AGG + chr8_1:41136992-41137011 None:intergenic 30.0%
CAAATATATTGTTTGCAGAC+AGG - chr8_1:41137001-41137020 Msa1194110:exon 30.0%
ATATGTTAGTACTCATGATG+TGG - chr8_1:41137235-41137254 Msa1194110:intron 30.0%
! ATCATTATACTAAAAGGTGC+TGG - chr8_1:41137306-41137325 Msa1194110:intron 30.0%
!! TCATTATACTAAAAGGTGCT+GGG - chr8_1:41137307-41137326 Msa1194110:intron 30.0%
! AGAGTTATTTCACTTTCTCA+TGG - chr8_1:41137353-41137372 Msa1194110:intron 30.0%
! TTTCACTTTCTCATGGTTTT+AGG - chr8_1:41137360-41137379 Msa1194110:intron 30.0%
CATACAAAAGAACTAGTAGA+AGG - chr8_1:41137411-41137430 Msa1194110:intron 30.0%
AATATCGTGTTCATTGTTAG+TGG - chr8_1:41137542-41137561 Msa1194110:intron 30.0%
!!! CTGAACATGGTTACTTTTTA+AGG - chr8_1:41137624-41137643 Msa1194110:intron 30.0%
TGGATCTAATATTGAAGTCA+AGG - chr8_1:41137833-41137852 Msa1194110:intron 30.0%
AATTTGAAAAACTCTACCTG+TGG + chr8_1:41138002-41138021 None:intergenic 30.0%
! GTCATGAATTTTCTCTTTAC+AGG - chr8_1:41138080-41138099 Msa1194110:intron 30.0%
! AGAAAATATTTTGCCTTGCT+AGG + chr8_1:41138297-41138316 None:intergenic 30.0%
! TCCTGTGAATCAGAAATTTT+TGG - chr8_1:41138472-41138491 Msa1194110:intron 30.0%
! CCTGTGAATCAGAAATTTTT+GGG - chr8_1:41138473-41138492 Msa1194110:intron 30.0%
!!! GACAGTTTTTTTCTTGTACA+TGG - chr8_1:41138606-41138625 Msa1194110:intron 30.0%
!!! TTCGACTTTTGAAGTTCTAT+TGG - chr8_1:41138796-41138815 Msa1194110:intron 30.0%
!!! TCGACTTTTGAAGTTCTATT+GGG - chr8_1:41138797-41138816 Msa1194110:intron 30.0%
! TTCCTAATAAGCTTTTGTCT+AGG - chr8_1:41138832-41138851 Msa1194110:intron 30.0%
! TCCTAATAAGCTTTTGTCTA+GGG - chr8_1:41138833-41138852 Msa1194110:intron 30.0%
! TTCTTAAGTGTAAAGGTGTA+TGG + chr8_1:41138944-41138963 None:intergenic 30.0%
GTTGAAGTTCTTAAGTGTAA+AGG + chr8_1:41138951-41138970 None:intergenic 30.0%
AGGTATGAGTTTGAACTTAC+CGG + chr8_1:41133812-41133831 None:intergenic 35.0%
!!! TTTTGTTGGGGTTGATTTGA+TGG - chr8_1:41134418-41134437 Msa1194110:CDS 35.0%
!! TTTGTTGGGGTTGATTTGAT+GGG - chr8_1:41134419-41134438 Msa1194110:CDS 35.0%
TTTCAGAAGAAAAAGGTGGT+AGG - chr8_1:41134447-41134466 Msa1194110:CDS 35.0%
TTCAGAAGAAAAAGGTGGTA+GGG - chr8_1:41134448-41134467 Msa1194110:CDS 35.0%
!!! TTTTTTCACATCCTTCTTGC+TGG - chr8_1:41134644-41134663 Msa1194110:intron 35.0%
! TTTTTCACATCCTTCTTGCT+GGG - chr8_1:41134645-41134664 Msa1194110:intron 35.0%
AAGTATAATTCCCAGCAAGA+AGG + chr8_1:41134658-41134677 None:intergenic 35.0%
GTTTGACAACTGTAATGTGT+TGG - chr8_1:41134686-41134705 Msa1194110:intron 35.0%
! TACCATTTTGCTTGCATACA+TGG - chr8_1:41134825-41134844 Msa1194110:CDS 35.0%
! ACAGGGACTTTGTATCATTT+TGG + chr8_1:41134958-41134977 None:intergenic 35.0%
!! GTTGTTAGTGGTTCACTTTT+TGG - chr8_1:41135049-41135068 Msa1194110:CDS 35.0%
TGCTGACAACTAGACAAAAT+TGG + chr8_1:41135180-41135199 None:intergenic 35.0%
TCCCGTGATATATTATTCGT+AGG - chr8_1:41135564-41135583 Msa1194110:CDS 35.0%
! GCTAATCTTTTAGACTTAGC+TGG - chr8_1:41135694-41135713 Msa1194110:CDS 35.0%
! AATCTTTTAGACTTAGCTGG+TGG - chr8_1:41135697-41135716 Msa1194110:CDS 35.0%
TAACATCTGATTCACCATCA+AGG + chr8_1:41135795-41135814 None:intergenic 35.0%
! GAATCAGATGTTAGTTCTTC+TGG - chr8_1:41135802-41135821 Msa1194110:CDS 35.0%
! ATGTTAGTTCTTCTGGATGT+CGG - chr8_1:41135809-41135828 Msa1194110:CDS 35.0%
TGCTAAATGGTGTTTCAGTT+GGG - chr8_1:41135891-41135910 Msa1194110:CDS 35.0%
TGATACTGAGGTAATCTATG+TGG - chr8_1:41135957-41135976 Msa1194110:CDS 35.0%
GATACTGAGGTAATCTATGT+GGG - chr8_1:41135958-41135977 Msa1194110:CDS 35.0%
TGAAATTGCTCAGAGATTAC+TGG - chr8_1:41136017-41136036 Msa1194110:CDS 35.0%
!! CAAGATAGAACTTTTTCTGC+AGG + chr8_1:41136080-41136099 None:intergenic 35.0%
CTGCAGAAAAAGTTCTATCT+TGG - chr8_1:41136078-41136097 Msa1194110:CDS 35.0%
AGCATATGGGTAGCATATAA+TGG + chr8_1:41136134-41136153 None:intergenic 35.0%
! ATCCCGATGATGATTTTGTT+TGG - chr8_1:41136244-41136263 Msa1194110:CDS 35.0%
!! TCCCGATGATGATTTTGTTT+GGG - chr8_1:41136245-41136264 Msa1194110:CDS 35.0%
ACCCAAACAAAATCATCATC+GGG + chr8_1:41136249-41136268 None:intergenic 35.0%
AAGTAGGCAAAATCATCAAG+TGG + chr8_1:41136281-41136300 None:intergenic 35.0%
! TGATTTTGCCTACTTTCTTG+AGG - chr8_1:41136286-41136305 Msa1194110:CDS 35.0%
AATCGTTTCCTCAAGAAAGT+AGG + chr8_1:41136297-41136316 None:intergenic 35.0%
CGATTTCATCGAGTTAAACT+TGG - chr8_1:41136312-41136331 Msa1194110:CDS 35.0%
! TCCCATCATCTGAAATTTAC+CGG - chr8_1:41136355-41136374 Msa1194110:CDS 35.0%
TCCGGTAAATTTCAGATGAT+GGG + chr8_1:41136359-41136378 None:intergenic 35.0%
TTGAGAATTTCATCCCTTAC+TGG + chr8_1:41136387-41136406 None:intergenic 35.0%
GTAAGGGATGAAATTCTCAA+AGG - chr8_1:41136387-41136406 Msa1194110:CDS 35.0%
! TTTAGCTTAGAGGATGTAGA+AGG + chr8_1:41136612-41136631 None:intergenic 35.0%
!!! CTGAATCTCTTTTAGCTTAG+AGG + chr8_1:41136622-41136641 None:intergenic 35.0%
CTCTAAGCTAAAAGAGATTC+AGG - chr8_1:41136620-41136639 Msa1194110:CDS 35.0%
!! GGACGACATGGATATTTTTA+AGG - chr8_1:41136677-41136696 Msa1194110:CDS 35.0%
!! CAATCTGAAATTTCTAGCTG+TGG - chr8_1:41136704-41136723 Msa1194110:CDS 35.0%
AATAAGCACTCTTCTCGAAA+CGG + chr8_1:41136920-41136939 None:intergenic 35.0%
CATATCGATAGTGTTTCTCA+TGG + chr8_1:41137220-41137239 None:intergenic 35.0%
TACTCATGATGTGGCATATT+GGG - chr8_1:41137244-41137263 Msa1194110:intron 35.0%
!! CATTATACTAAAAGGTGCTG+GGG - chr8_1:41137308-41137327 Msa1194110:intron 35.0%
TGCTGATACAATATGGTCAA+TGG + chr8_1:41137393-41137412 None:intergenic 35.0%
GCCATCTTTCTTGATTATGA+TGG - chr8_1:41137434-41137453 Msa1194110:intron 35.0%
GCCATCATAATCAAGAAAGA+TGG + chr8_1:41137438-41137457 None:intergenic 35.0%
TAAGCACAGATATGACTTCA+GGG + chr8_1:41137499-41137518 None:intergenic 35.0%
TTAAGCACAGATATGACTTC+AGG + chr8_1:41137500-41137519 None:intergenic 35.0%
CAAGAGATTCTCTGAATGAA+TGG - chr8_1:41137570-41137589 Msa1194110:intron 35.0%
TTTACATCATGCAAACTGCT+GGG - chr8_1:41137593-41137612 Msa1194110:intron 35.0%
GGAAACAAGTCATTTGTTTG+CGG - chr8_1:41137752-41137771 Msa1194110:intron 35.0%
ATTTGTTTGCGGATCTTGAT+TGG - chr8_1:41137763-41137782 Msa1194110:intron 35.0%
GAACCAGCAATTGTTAAAAG+AGG - chr8_1:41137954-41137973 Msa1194110:intron 35.0%
GCTTAACTTCAACAATATGC+TGG + chr8_1:41137980-41137999 None:intergenic 35.0%
TATTGTTGAAGTTAAGCCAC+AGG - chr8_1:41137983-41138002 Msa1194110:intron 35.0%
! CTTACTAGTTTCACTGTTAG+AGG + chr8_1:41138040-41138059 None:intergenic 35.0%
TGAGAAGGTTCTCTTGAATA+TGG - chr8_1:41138125-41138144 Msa1194110:intron 35.0%
CTCTTGAATATGGTTAATGC+CGG - chr8_1:41138135-41138154 Msa1194110:intron 35.0%
GATGTTGTAAAGTTGCTTGA+TGG - chr8_1:41138330-41138349 Msa1194110:intron 35.0%
!!! TTTGGGCTTTTGATTTGTTG+AGG + chr8_1:41138364-41138383 None:intergenic 35.0%
CTCAAAAGAAACCTGGAATT+GGG + chr8_1:41138394-41138413 None:intergenic 35.0%
TCTCAAAAGAAACCTGGAAT+TGG + chr8_1:41138395-41138414 None:intergenic 35.0%
!! TTTTGAGAGCACAGTTTCTT+AGG - chr8_1:41138407-41138426 Msa1194110:intron 35.0%
CCCAAAAATTTCTGATTCAC+AGG + chr8_1:41138476-41138495 None:intergenic 35.0%
!!! CGACTTTTGAAGTTCTATTG+GGG - chr8_1:41138798-41138817 Msa1194110:intron 35.0%
ACCCTAGACAAAAGCTTATT+AGG + chr8_1:41138837-41138856 None:intergenic 35.0%
GACCATGTATGCAAGCAAAA+TGG + chr8_1:41134830-41134849 None:intergenic 40.0%
!! AATACTAACTCTAAGACGCG+TGG + chr8_1:41135252-41135271 None:intergenic 40.0%
GTGACGACATGAATAAGTGA+CGG + chr8_1:41135288-41135307 None:intergenic 40.0%
TTTCATCTATCATCACGTCC+TGG - chr8_1:41135326-41135345 Msa1194110:CDS 40.0%
GGTATGAGCAAATACATGCA+TGG + chr8_1:41135509-41135528 None:intergenic 40.0%
TAACCCTTGGAAGACTTCTT+GGG + chr8_1:41135747-41135766 None:intergenic 40.0%
ATAACCCTTGGAAGACTTCT+TGG + chr8_1:41135748-41135767 None:intergenic 40.0%
TCAAGGTCAGAAATAATCCC+AGG + chr8_1:41135778-41135797 None:intergenic 40.0%
!! GGGATTATTTCTGACCTTGA+TGG - chr8_1:41135778-41135797 Msa1194110:CDS 40.0%
! TGTTAGTTCTTCTGGATGTC+GGG - chr8_1:41135810-41135829 Msa1194110:CDS 40.0%
! ATATCTCTTTTAGCCTGCAG+CGG + chr8_1:41135865-41135884 None:intergenic 40.0%
CTGCTAAATGGTGTTTCAGT+TGG - chr8_1:41135890-41135909 Msa1194110:CDS 40.0%
ACTGGATGACTTTAATTGCG+TGG - chr8_1:41136035-41136054 Msa1194110:CDS 40.0%
!! AACTTTTTCTGCAGGTCATG+GGG + chr8_1:41136072-41136091 None:intergenic 40.0%
!! GAACTTTTTCTGCAGGTCAT+GGG + chr8_1:41136073-41136092 None:intergenic 40.0%
!! AGAACTTTTTCTGCAGGTCA+TGG + chr8_1:41136074-41136093 None:intergenic 40.0%
! GGTAGCATATAATGGAAGAG+AGG + chr8_1:41136126-41136145 None:intergenic 40.0%
TCACCATGATCTGAGCATAT+GGG + chr8_1:41136147-41136166 None:intergenic 40.0%
ATCACCATGATCTGAGCATA+TGG + chr8_1:41136148-41136167 None:intergenic 40.0%
! ATGATGGGAAAGGACTATGA+AGG + chr8_1:41136344-41136363 None:intergenic 40.0%
GTCCGGTAAATTTCAGATGA+TGG + chr8_1:41136360-41136379 None:intergenic 40.0%
CAACTTCACCCTGCAAATTT+GGG + chr8_1:41136749-41136768 None:intergenic 40.0%
ACAACTTCACCCTGCAAATT+TGG + chr8_1:41136750-41136769 None:intergenic 40.0%
ATAAGCACTCTTCTCGAAAC+GGG + chr8_1:41136919-41136938 None:intergenic 40.0%
TTGCATCGTCAATGCTGTAA+GGG - chr8_1:41136956-41136975 Msa1194110:CDS 40.0%
! CTTGTTGTGTCTGAGTTCAT+TGG - chr8_1:41137083-41137102 Msa1194110:intron 40.0%
GTACTCATGATGTGGCATAT+TGG - chr8_1:41137243-41137262 Msa1194110:intron 40.0%
!! ACGCAGTTTTATGCAGGATT+TGG - chr8_1:41137268-41137287 Msa1194110:intron 40.0%
TCGTGTTCATTGTTAGTGGA+AGG - chr8_1:41137546-41137565 Msa1194110:intron 40.0%
CGTGTTCATTGTTAGTGGAA+GGG - chr8_1:41137547-41137566 Msa1194110:intron 40.0%
GTTTACATCATGCAAACTGC+TGG - chr8_1:41137592-41137611 Msa1194110:intron 40.0%
TCGTATACAGAAGCAACTGA+TGG - chr8_1:41137813-41137832 Msa1194110:intron 40.0%
!! TGAAGTCAAGGAAAGTGCTT+TGG - chr8_1:41137845-41137864 Msa1194110:intron 40.0%
TAGCAAGAACACTTTCCAAG+TGG + chr8_1:41137932-41137951 None:intergenic 40.0%
! TGGCCTCTTTTAACAATTGC+TGG + chr8_1:41137960-41137979 None:intergenic 40.0%
TCTTTACAGGGAGTAACCAA+AGG - chr8_1:41138093-41138112 Msa1194110:intron 40.0%
TGATGTGCATTGGAGATGAT+AGG - chr8_1:41138175-41138194 Msa1194110:intron 40.0%
TACCGTGCAAGCAAAAATCT+CGG + chr8_1:41138265-41138284 None:intergenic 40.0%
!! TTTGATTTGTTGAGGTAGCG+AGG + chr8_1:41138356-41138375 None:intergenic 40.0%
TGGAATTGGGCAAGATGTTT+GGG + chr8_1:41138381-41138400 None:intergenic 40.0%
AACGAACCAACAATGCTGTT+TGG + chr8_1:41138437-41138456 None:intergenic 40.0%
!! ATTGTTGGTTCGTTATGCGA+GGG - chr8_1:41138443-41138462 Msa1194110:intron 40.0%
ACAAAATCGCACTATTCGTC+AGG + chr8_1:41138504-41138523 None:intergenic 40.0%
! GACGAATAGTGCGATTTTGT+TGG - chr8_1:41138504-41138523 Msa1194110:intron 40.0%
! ATAGTGCGATTTTGTTGGTG+TGG - chr8_1:41138509-41138528 Msa1194110:intron 40.0%
GTGTGGATCAGATTCTTTCT+GGG - chr8_1:41138526-41138545 Msa1194110:intron 40.0%
AGTACAAGCAACGATCAATC+AGG + chr8_1:41138695-41138714 None:intergenic 40.0%
!! GTGCAGCAAGATCTACTTTT+TGG + chr8_1:41138864-41138883 None:intergenic 40.0%
GAGAGAGAGAGAGAGAAGAA+TGG + chr8_1:41133717-41133736 None:intergenic 45.0%
GAAAAGTGGTGAGTGAAGAG+AGG + chr8_1:41133832-41133851 None:intergenic 45.0%
ACTGTCGAACAAATAGCACC+AGG + chr8_1:41135347-41135366 None:intergenic 45.0%
AACCCTTGGAAGACTTCTTG+GGG + chr8_1:41135746-41135765 None:intergenic 45.0%
CAAGGGTTATGACTGTTCCT+GGG - chr8_1:41135758-41135777 Msa1194110:CDS 45.0%
ATGGTGTTTCAGTTGGGATG+AGG - chr8_1:41135897-41135916 Msa1194110:CDS 45.0%
! CGGGTTTTCTTCTGATACTG+AGG - chr8_1:41135945-41135964 Msa1194110:CDS 45.0%
AATCTATGTGGGTTCGCTCA+AGG - chr8_1:41135969-41135988 Msa1194110:CDS 45.0%
TGAGATAGATGCTAGTGAGC+AGG - chr8_1:41135993-41136012 Msa1194110:CDS 45.0%
! GTTTTTGTAAGCAGCAGCTC+TGG - chr8_1:41136100-41136119 Msa1194110:CDS 45.0%
CTACCCATATGCTCAGATCA+TGG - chr8_1:41136141-41136160 Msa1194110:CDS 45.0%
TTTACCGGACTTTGCCAGTA+AGG - chr8_1:41136370-41136389 Msa1194110:CDS 45.0%
TTACCGGACTTTGCCAGTAA+GGG - chr8_1:41136371-41136390 Msa1194110:CDS 45.0%
TCTTGCTGCAGTAGAATGCT+AGG - chr8_1:41136468-41136487 Msa1194110:CDS 45.0%
CTGGACTATGAATCTAAGCG+CGG - chr8_1:41136492-41136511 Msa1194110:CDS 45.0%
GAATCTAAGCGCGGACATAT+AGG - chr8_1:41136501-41136520 Msa1194110:CDS 45.0%
TTTGCCGGTAGGAATTCACA+TGG - chr8_1:41136560-41136579 Msa1194110:CDS 45.0%
TTGCCGGTAGGAATTCACAT+GGG - chr8_1:41136561-41136580 Msa1194110:CDS 45.0%
CTACCCATGTGAATTCCTAC+CGG + chr8_1:41136567-41136586 None:intergenic 45.0%
! TATTCTTGGTGTGGACGACA+TGG - chr8_1:41136665-41136684 Msa1194110:CDS 45.0%
CAGCAGAACCCAAATTTGCA+GGG - chr8_1:41136738-41136757 Msa1194110:CDS 45.0%
ATAAATCCTGCAAGGGGTTC+AGG - chr8_1:41136783-41136802 Msa1194110:CDS 45.0%
TAAATCCTGCAAGGGGTTCA+GGG - chr8_1:41136784-41136803 Msa1194110:CDS 45.0%
! GAGCGGTCAATGATAATGAC+TGG + chr8_1:41136891-41136910 None:intergenic 45.0%
TAAGCACTCTTCTCGAAACG+GGG + chr8_1:41136918-41136937 None:intergenic 45.0%
GTTGCATCGTCAATGCTGTA+AGG - chr8_1:41136955-41136974 Msa1194110:CDS 45.0%
ATCGTCAATGCTGTAAGGGA+TGG - chr8_1:41136960-41136979 Msa1194110:CDS 45.0%
TCGTCAATGCTGTAAGGGAT+GGG - chr8_1:41136961-41136980 Msa1194110:CDS 45.0%
ACAACAAGCATGCTTGTACG+AGG + chr8_1:41137071-41137090 None:intergenic 45.0%
GTTGTTCACCTTCTCTGAGT+GGG - chr8_1:41137105-41137124 Msa1194110:intron 45.0%
TTGTTCACCTTCTCTGAGTG+GGG - chr8_1:41137106-41137125 Msa1194110:intron 45.0%
GCAACTGCATCTATATCCCA+GGG + chr8_1:41137146-41137165 None:intergenic 45.0%
AGCAACTGCATCTATATCCC+AGG + chr8_1:41137147-41137166 None:intergenic 45.0%
!! ACTAAAAGGTGCTGGGGAAT+TGG - chr8_1:41137314-41137333 Msa1194110:intron 45.0%
ACAGATATGACTTCAGGGCT+GGG + chr8_1:41137494-41137513 None:intergenic 45.0%
GACTGAGGAGGAAGAAACAA+AGG + chr8_1:41137657-41137676 None:intergenic 45.0%
!!! ATTTTTTGGTGGGGTGACTG+AGG + chr8_1:41137672-41137691 None:intergenic 45.0%
GTGGAATAGCGACTCTGAAT+GGG - chr8_1:41137731-41137750 Msa1194110:intron 45.0%
TGCGGATCTTGATTGGAAAC+AGG - chr8_1:41137770-41137789 Msa1194110:intron 45.0%
GGATCTTGATTGGAAACAGG+TGG - chr8_1:41137773-41137792 Msa1194110:intron 45.0%
TCTGTATACGACTGCATGAC+AGG + chr8_1:41137804-41137823 None:intergenic 45.0%
!! TCAAGGAAAGTGCTTTGGTG+TGG - chr8_1:41137850-41137869 Msa1194110:intron 45.0%
! CAAGATGCAGACCCTGATTT+TGG - chr8_1:41137879-41137898 Msa1194110:intron 45.0%
CAAGTGGTCCAGCAATTCTT+TGG + chr8_1:41137916-41137935 None:intergenic 45.0%
CAAAGAATTGCTGGACCACT+TGG - chr8_1:41137914-41137933 Msa1194110:intron 45.0%
ACAGGGAGTAACCAAAGGTT+TGG - chr8_1:41138098-41138117 Msa1194110:intron 45.0%
CTTCTCAGCTACCAAACCTT+TGG + chr8_1:41138112-41138131 None:intergenic 45.0%
! CAAAGGTTTGGTAGCTGAGA+AGG - chr8_1:41138110-41138129 Msa1194110:intron 45.0%
!! CACGAAATCTGGTGGATTAC+CGG + chr8_1:41138157-41138176 None:intergenic 45.0%
ATGCACATCACGAAATCTGG+TGG + chr8_1:41138165-41138184 None:intergenic 45.0%
CCAATGCACATCACGAAATC+TGG + chr8_1:41138168-41138187 None:intergenic 45.0%
CCAGATTTCGTGATGTGCAT+TGG - chr8_1:41138165-41138184 Msa1194110:intron 45.0%
! TCCCGAGATTTTTGCTTGCA+CGG - chr8_1:41138260-41138279 Msa1194110:intron 45.0%
ACCGTGCAAGCAAAAATCTC+GGG + chr8_1:41138264-41138283 None:intergenic 45.0%
! GAGATTTTTGCTTGCACGGT+AGG - chr8_1:41138264-41138283 Msa1194110:intron 45.0%
! TTTTTGCTTGCACGGTAGGT+AGG - chr8_1:41138268-41138287 Msa1194110:intron 45.0%
CTGGAATTGGGCAAGATGTT+TGG + chr8_1:41138382-41138401 None:intergenic 45.0%
CAAACATCTTGCCCAATTCC+AGG - chr8_1:41138380-41138399 Msa1194110:intron 45.0%
CTGTGCTCTCAAAAGAAACC+TGG + chr8_1:41138401-41138420 None:intergenic 45.0%
!! CATTGTTGGTTCGTTATGCG+AGG - chr8_1:41138442-41138461 Msa1194110:intron 45.0%
GGTGTGGATCAGATTCTTTC+TGG - chr8_1:41138525-41138544 Msa1194110:intron 45.0%
TTCTTTCTGGGCTCCTGAAT+CGG - chr8_1:41138538-41138557 Msa1194110:intron 45.0%
ACTGGTGCTTCATTGAGCAT+CGG - chr8_1:41138649-41138668 Msa1194110:intron 45.0%
!! ATATAGTAAATAAAATTATT+GGG + chr8_1:41134204-41134223 None:intergenic 5.0%
!! AATATAGTAAATAAAATTAT+TGG + chr8_1:41134205-41134224 None:intergenic 5.0%
!!! GAATATTTTTTTTTTATTTT+TGG - chr8_1:41134327-41134346 Msa1194110:CDS 5.0%
!!! TTATATTTTTTTCTATTTTT+TGG + chr8_1:41137686-41137705 None:intergenic 5.0%
GAGTTTGAACTTACCGGCGA+CGG + chr8_1:41133806-41133825 None:intergenic 50.0%
TAAGTGACGGCAGGTCAACT+AGG + chr8_1:41135275-41135294 None:intergenic 50.0%
CGACATGAATAAGTGACGGC+AGG + chr8_1:41135284-41135303 None:intergenic 50.0%
ACACCCCAAGAAGTCTTCCA+AGG - chr8_1:41135740-41135759 Msa1194110:CDS 50.0%
CACCCCAAGAAGTCTTCCAA+GGG - chr8_1:41135741-41135760 Msa1194110:CDS 50.0%
CCAGGAACAGTCATAACCCT+TGG + chr8_1:41135760-41135779 None:intergenic 50.0%
CCAAGGGTTATGACTGTTCC+TGG - chr8_1:41135757-41135776 Msa1194110:CDS 50.0%
TCGGGAGCGGAAAATCATTG+TGG - chr8_1:41135828-41135847 Msa1194110:CDS 50.0%
ATCGCTTTGACCGAGTGCTT+TGG - chr8_1:41136166-41136185 Msa1194110:CDS 50.0%
! CATAAGCCTGCCAAAGCACT+CGG + chr8_1:41136179-41136198 None:intergenic 50.0%
CATCCCTTACTGGCAAAGTC+CGG + chr8_1:41136377-41136396 None:intergenic 50.0%
CTGCAGTAGAATGCTAGGTC+TGG - chr8_1:41136473-41136492 Msa1194110:CDS 50.0%
CGGTAGGAATTCACATGGGT+AGG - chr8_1:41136565-41136584 Msa1194110:CDS 50.0%
GCAGCAGAACCCAAATTTGC+AGG - chr8_1:41136737-41136756 Msa1194110:CDS 50.0%
TGCAAAGCTGGATGAAGCTG+TGG - chr8_1:41137028-41137047 Msa1194110:five_prime_UTR 50.0%
GCAAAGCTGGATGAAGCTGT+GGG - chr8_1:41137029-41137048 Msa1194110:five_prime_UTR 50.0%
GGTTGTTCACCTTCTCTGAG+TGG - chr8_1:41137104-41137123 Msa1194110:intron 50.0%
!! TTGGGCACGCAGTTTTATGC+AGG - chr8_1:41137262-41137281 Msa1194110:intron 50.0%
AGATATGACTTCAGGGCTGG+GGG + chr8_1:41137492-41137511 None:intergenic 50.0%
CAGATATGACTTCAGGGCTG+GGG + chr8_1:41137493-41137512 None:intergenic 50.0%
CACAGATATGACTTCAGGGC+TGG + chr8_1:41137495-41137514 None:intergenic 50.0%
GGTGGAATAGCGACTCTGAA+TGG - chr8_1:41137730-41137749 Msa1194110:intron 50.0%
CTTGGCAGGAGCCAAAATCA+GGG + chr8_1:41137893-41137912 None:intergenic 50.0%
!! CAGCAATTCTTTGGCTTGGC+AGG + chr8_1:41137907-41137926 None:intergenic 50.0%
CTGCCAAGCCAAAGAATTGC+TGG - chr8_1:41137905-41137924 Msa1194110:intron 50.0%
GGTCCAGCAATTCTTTGGCT+TGG + chr8_1:41137911-41137930 None:intergenic 50.0%
GCAAAAATCTCGGGAGCTGA+TGG + chr8_1:41138255-41138274 None:intergenic 50.0%
! GAGAGCACAGTTTCTTAGGC+AGG - chr8_1:41138411-41138430 Msa1194110:intron 50.0%
! GATGCCATGCAAACCGATTC+AGG + chr8_1:41138554-41138573 None:intergenic 50.0%
!! GAATCGGTTTGCATGGCATC+AGG - chr8_1:41138554-41138573 Msa1194110:intron 50.0%
GAACTTACCGGCGACGGTAA+CGG + chr8_1:41133800-41133819 None:intergenic 55.0%
GGAAGACTTCTTGGGGTGTG+AGG + chr8_1:41135739-41135758 None:intergenic 55.0%
GTTCTTCTGGATGTCGGGAG+CGG - chr8_1:41135815-41135834 Msa1194110:CDS 55.0%
CAGGTCATGGGGTAGAAAGG+TGG + chr8_1:41136061-41136080 None:intergenic 55.0%
CTGCAGGTCATGGGGTAGAA+AGG + chr8_1:41136064-41136083 None:intergenic 55.0%
CTTTGACCGAGTGCTTTGGC+AGG - chr8_1:41136170-41136189 Msa1194110:CDS 55.0%
GGGTTCAGGGAAGGATGTTC+AGG - chr8_1:41136797-41136816 Msa1194110:CDS 55.0%
TCTCGAAACGGGGAACAGAG+CGG + chr8_1:41136908-41136927 None:intergenic 55.0%
CAGACAGGGAACTGCAAAGC+TGG - chr8_1:41137016-41137035 Msa1194110:exon 55.0%
TTCTCTGAGTGGGGCCATCA+GGG - chr8_1:41137115-41137134 Msa1194110:intron 55.0%
ATCCCAGGGATTGACCCTGA+TGG + chr8_1:41137132-41137151 None:intergenic 55.0%
!! AAGGTGCTGGGGAATTGGTC+TGG - chr8_1:41137319-41137338 Msa1194110:intron 55.0%
!! AGGTGCTGGGGAATTGGTCT+GGG - chr8_1:41137320-41137339 Msa1194110:intron 55.0%
! TGGGGAATTGGTCTGGGCTT+GGG - chr8_1:41137326-41137345 Msa1194110:intron 55.0%
CTGGGACTTGCAGCTGAACA+TGG - chr8_1:41137611-41137630 Msa1194110:intron 55.0%
! TTTTGGTGGGGTGACTGAGG+AGG + chr8_1:41137669-41137688 None:intergenic 55.0%
GCTTGGCAGGAGCCAAAATC+AGG + chr8_1:41137894-41137913 None:intergenic 55.0%
! TCGGGAGCTGATGGTAACGA+CGG + chr8_1:41138246-41138265 None:intergenic 55.0%
GGTAGGTAGGAAGCCTAGCA+AGG - chr8_1:41138281-41138300 Msa1194110:intron 55.0%
GGCAGGCCAAACAGCATTGT+TGG - chr8_1:41138428-41138447 Msa1194110:intron 55.0%
!! GGCTCCTGAATCGGTTTGCA+TGG - chr8_1:41138547-41138566 Msa1194110:intron 55.0%
CGGTTTGCATGGCATCAGGA+AGG - chr8_1:41138558-41138577 Msa1194110:intron 55.0%
GCATCAGGAAGGTTGACGTG+TGG - chr8_1:41138569-41138588 Msa1194110:intron 55.0%
GAAGGTTGACGTGTGGTTCG+TGG - chr8_1:41138576-41138595 Msa1194110:intron 55.0%
CACTACGCGTTTCCCCTCAC+CGG - chr8_1:41133761-41133780 Msa1194110:three_prime_UTR 60.0%
TAACGGCGACGGCGAGATTC+CGG + chr8_1:41133783-41133802 None:intergenic 60.0%
GGCAAACATGTTGCCGCTGC+AGG - chr8_1:41135849-41135868 Msa1194110:CDS 60.0%
TCCTGCAAGGGGTTCAGGGA+AGG - chr8_1:41136788-41136807 Msa1194110:CDS 60.0%
TCCTTCCCTGAACCCCTTGC+AGG + chr8_1:41136792-41136811 None:intergenic 60.0%
CTGATGGCCCCACTCAGAGA+AGG + chr8_1:41137116-41137135 None:intergenic 60.0%
CTTCTCTGAGTGGGGCCATC+AGG - chr8_1:41137114-41137133 Msa1194110:intron 60.0%
GGCCATCAGGGTCAATCCCT+GGG - chr8_1:41137127-41137146 Msa1194110:intron 60.0%
! CTGGGGAATTGGTCTGGGCT+TGG - chr8_1:41137325-41137344 Msa1194110:intron 60.0%
! GGGGAATTGGTCTGGGCTTG+GGG - chr8_1:41137327-41137346 Msa1194110:intron 60.0%
! CGGGAGCTGATGGTAACGAC+GGG + chr8_1:41138245-41138264 None:intergenic 60.0%
GACGGCGAGATTCCGGTGAG+GGG + chr8_1:41133776-41133795 None:intergenic 65.0%
CGACGGCGAGATTCCGGTGA+GGG + chr8_1:41133777-41133796 None:intergenic 65.0%
GGGCCATCAGGGTCAATCCC+TGG - chr8_1:41137126-41137145 Msa1194110:intron 65.0%
GCGACGGCGAGATTCCGGTG+AGG + chr8_1:41133778-41133797 None:intergenic 70.0%
! ACCGGCGACGGTAACGGCGA+CGG + chr8_1:41133794-41133813 None:intergenic 70.0%
GCCGTCGCCGTTACCGTCGC+CGG - chr8_1:41133790-41133809 Msa1194110:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 41133689 41139004 41133689 ID=Msa1194110;Name=Msa1194110
chr8_1 mRNA 41133689 41139004 41133689 ID=Msa1194110-mRNA-1;Parent=Msa1194110;Name=Msa1194110-mRNA-1;_AED=0.00;_eAED=0.00;_QI=158|1|1|1|0.66|0.5|4|576|856
chr8_1 exon 41133689 41134591 41133689 ID=Msa1194110-mRNA-1:exon:13257;Parent=Msa1194110-mRNA-1
chr8_1 exon 41134689 41134962 41134689 ID=Msa1194110-mRNA-1:exon:13256;Parent=Msa1194110-mRNA-1
chr8_1 exon 41135048 41137052 41135048 ID=Msa1194110-mRNA-1:exon:13255;Parent=Msa1194110-mRNA-1
chr8_1 exon 41138882 41139004 41138882 ID=Msa1194110-mRNA-1:exon:13254;Parent=Msa1194110-mRNA-1
chr8_1 five_prime_UTR 41138882 41139004 41138882 ID=Msa1194110-mRNA-1:five_prime_utr;Parent=Msa1194110-mRNA-1
chr8_1 five_prime_UTR 41137018 41137052 41137018 ID=Msa1194110-mRNA-1:five_prime_utr;Parent=Msa1194110-mRNA-1
chr8_1 CDS 41135048 41137017 41135048 ID=Msa1194110-mRNA-1:cds;Parent=Msa1194110-mRNA-1
chr8_1 CDS 41134689 41134962 41134689 ID=Msa1194110-mRNA-1:cds;Parent=Msa1194110-mRNA-1
chr8_1 CDS 41134265 41134591 41134265 ID=Msa1194110-mRNA-1:cds;Parent=Msa1194110-mRNA-1
chr8_1 three_prime_UTR 41133689 41134264 41133689 ID=Msa1194110-mRNA-1:three_prime_utr;Parent=Msa1194110-mRNA-1
Gene Sequence

>Msa1194110

ATGACATCAAGATCGTATGCTAATCTTTTAGACTTAGCTGGTGGAGACTTGCTTGATATTCCTCACACCCCAAGAAGTCTTCCAAGGGTTATGACTGTTCCTGGGATTATTTCTGACCTTGATGGTGAATCAGATGTTAGTTCTTCTGGATGTCGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCGCTGCAGGCTAAAAGAGATATTGATACTGCTAAATGGTGTTTCAGTTGGGATGAGGATTCAATTCTATTACAATTAAAAGACGGGTTTTCTTCTGATACTGAGGTAATCTATGTGGGTTCGCTCAAGGTTGAGATAGATGCTAGTGAGCAGGATGAAATTGCTCAGAGATTACTGGATGACTTTAATTGCGTGGCCACCTTTCTACCCCATGACCTGCAGAAAAAGTTCTATCTTGGTTTTTGTAAGCAGCAGCTCTGGCCTCTCTTCCATTATATGCTACCCATATGCTCAGATCATGGTGATCGCTTTGACCGAGTGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAAGTCATGGAAGTGATTGATCCCGATGATGATTTTGTTTGGGTTCATGACTACCACTTGATGATTTTGCCTACTTTCTTGAGGAAACGATTTCATCGAGTTAAACTTGGGTTTTTCCTTCATAGTCCTTTCCCATCATCTGAAATTTACCGGACTTTGCCAGTAAGGGATGAAATTCTCAAAGGATTGTTGAATTCGGATTTAATTGGTTTTCATACATTCGATTACGCACGTCACTTTCTTTCTTGCTGCAGTAGAATGCTAGGTCTGGACTATGAATCTAAGCGCGGACATATAGGACTTGATTACTTTGGCCGCACTATATTTATCAAAATTTTGCCGGTAGGAATTCACATGGGTAGGCTTGACTCTGTATTAAATCTTCCTTCTACATCCTCTAAGCTAAAAGAGATTCAGGAAGAGTTTAAAGATAAGAAAGTTATTCTTGGTGTGGACGACATGGATATTTTTAAGGGTATCAATCTGAAATTTCTAGCTGTGGAACAGCTGCTGCAGCAGAACCCAAATTTGCAGGGTGAAGTTGTCCTTGTTCAAATTATAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAAAGAAGCTTATTTAATTGCCAAGAGGATCAATGAAATTTATGGTTCAAAACATTATCAGCCAGTCATTATCATTGACCGCTCTGTTCCCCGTTTCGAGAAGAGTGCTTATTATGCTCTAGCTGAATGTTGCATCGTCAATGCTGTAAGGGATGGGATGAACCTAGTCCCATACAAATATATTGTTTGCAGACAGGGAACTGCAAAGCTGGATGAAGCTGTGGGTAGACAAAGTGATTCTCCTCGTACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCACCTTCTCTGAGTGGGGCCATCAGGGTCAATCCCTGGGATATAGATGCAGTTGCTGATGCTATGAATTTAGCCCTCAGTATGGGGGTTTCTGAGAAGAAGTTGCGCCATGAGAAACACTATCGATATGTTAGTACTCATGATGTGGCATATTGGGCACGCAGTTTTATGCAGGATTTGGAGAGAGCCTGCAAAGATCATTATACTAAAAGGTGCTGGGGAATTGGTCTGGGCTTGGGGTTCAGAGTTATTTCACTTTCTCATGGTTTTAGGAAGCTGTCCATTGACCATATTGTATCAGCATACAAAAGAACTAGTAGAAGGGCCATCTTTCTTGATTATGATGGCACTCTTGTACCACAATCTTATATTAATAAAACCCCCAGCCCTGAAGTCATATCTGTGCTTAATTCTCTGTGTAATGATACCAAAAATATCGTGTTCATTGTTAGTGGAAGGGCAAGAGATTCTCTGAATGAATGGTTTACATCATGCAAACTGCTGGGACTTGCAGCTGAACATGGTTACTTTTTAAGGTGGAATAGCGACTCTGAATGGGAAACAAGTCATTTGTTTGCGGATCTTGATTGGAAACAGGTGGTGCTGCCTGTCATGCAGTCGTATACAGAAGCAACTGATGGATCTAATATTGAAGTCAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGCTCCTGCCAAGCCAAAGAATTGCTGGACCACTTGGAAAGTGTTCTTGCTAATGAACCAGCAATTGTTAAAAGAGGCCAGCATATTGTTGAAGTTAAGCCACAGGGAGTAACCAAAGGTTTGGTAGCTGAGAAGGTTCTCTTGAATATGGTTAATGCCGGTAATCCACCAGATTTCGTGATGTGCATTGGAGATGATAGGTCTGATGAAGACATGTTTGAAAGCATTTTGAGTACAGTCTCGTGCCCGTCGTTACCATCAGCTCCCGAGATTTTTGCTTGCACGGTAGGTAGGAAGCCTAGCAAGGCAAAATATTTTCTTGATGACACTGCTGATGTTGTAAAGTTGCTTGATGGCCTCGCTACCTCAACAAATCAAAAGCCCAAACATCTTGCCCAATTCCAGGTTTCTTTTGAGAGCACAGTTTCTTAG
Protein sequence

>Msa1194110

MTSRSYANLLDLAGGDLLDIPHTPRSLPRVMTVPGIISDLDGESDVSSSGCRERKIIVANMLPLQAKRDIDTAKWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKVEIDASEQDEIAQRLLDDFNCVATFLPHDLQKKFYLGFCKQQLWPLFHYMLPICSDHGDRFDRVLWQAYVSANKIFADKVMEVIDPDDDFVWVHDYHLMILPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLDSVLNLPSTSSKLKEIQEEFKDKKVILGVDDMDIFKGINLKFLAVEQLLQQNPNLQGEVVLVQIINPARGSGKDVQEAKKEAYLIAKRINEIYGSKHYQPVIIIDRSVPRFEKSAYYALAECCIVNAVRDGMNLVPYKYIVCRQGTAKLDEAVGRQSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMNLALSMGVSEKKLRHEKHYRYVSTHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVISLSHGFRKLSIDHIVSAYKRTSRRAIFLDYDGTLVPQSYINKTPSPEVISVLNSLCNDTKNIVFIVSGRARDSLNEWFTSCKLLGLAAEHGYFLRWNSDSEWETSHLFADLDWKQVVLPVMQSYTEATDGSNIEVKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAIVKRGQHIVEVKPQGVTKGLVAEKVLLNMVNAGNPPDFVMCIGDDRSDEDMFESILSTVSCPSLPSAPEIFACTVGRKPSKAKYFLDDTADVVKLLDGLATSTNQKPKHLAQFQVSFESTVS*