AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1326290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1326290 MtrunA17_Chr8g0364961 99.416 856 5 0 1 856 1 856 0.0 1766
Msa1326290 MtrunA17_Chr1g0209251 66.627 845 274 2 1 839 1 843 0.0 1191
Msa1326290 MtrunA17_Chr4g0041381 63.466 854 297 3 1 841 1 852 0.0 1150
Msa1326290 MtrunA17_Chr8g0391971 65.258 852 280 7 1 839 1 849 0.0 1149
Msa1326290 MtrunA17_Chr1g0161531 63.934 854 292 6 1 840 1 852 0.0 1131
Msa1326290 MtrunA17_Chr4g0073041 62.247 792 289 5 52 839 55 840 0.0 1036
Msa1326290 MtrunA17_Chr3g0117891 60.053 751 299 1 77 827 3 752 0.0 926
Msa1326290 MtrunA17_Chr3g0107401 54.348 598 243 3 56 653 2 569 0.0 625
Msa1326290 MtrunA17_Chr2g0314621 34.252 762 426 21 52 787 122 834 5.76e-134 423
Msa1326290 MtrunA17_Chr8g0359371 34.165 802 434 23 52 814 83 829 4.23e-132 417
Msa1326290 MtrunA17_Chr8g0380051 37.500 352 186 8 36 374 53 383 2.63e-67 231
Msa1326290 MtrunA17_Chr3g0107421 54.857 175 79 0 246 420 1 175 1.70e-57 194
Msa1326290 MtrunA17_Chr3g0116901 51.955 179 72 4 8 186 6 170 5.98e-52 179
Msa1326290 MtrunA17_Chr8g0380061 30.892 437 248 13 381 800 5 404 2.45e-50 185
Msa1326290 MtrunA17_Chr3g0107411 53.741 147 68 0 437 583 1 147 9.37e-48 167
Msa1326290 MtrunA17_Chr3g0107431 47.458 118 47 2 50 167 7 109 2.45e-28 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1326290 AT1G23870.1 74.510 867 209 3 1 855 1 867 0.0 1370
Msa1326290 AT1G70290.1 72.992 859 225 3 1 855 1 856 0.0 1338
Msa1326290 AT1G60140.6 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1326290 AT1G60140.1 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1326290 AT1G60140.2 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1326290 AT1G60140.5 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1326290 AT1G60140.4 72.242 861 233 1 1 855 1 861 0.0 1331
Msa1326290 AT1G70290.2 68.685 859 224 4 1 855 1 818 0.0 1241
Msa1326290 AT1G60140.3 73.580 757 194 1 1 751 1 757 0.0 1195
Msa1326290 AT4G17770.1 64.852 845 289 2 1 838 1 844 0.0 1177
Msa1326290 AT4G17770.2 64.852 845 289 2 1 838 1 844 0.0 1177
Msa1326290 AT1G68020.2 64.019 856 291 4 1 839 1 856 0.0 1156
Msa1326290 AT1G68020.3 64.019 856 291 4 1 839 1 856 0.0 1156
Msa1326290 AT1G06410.3 63.077 845 296 4 1 837 1 837 0.0 1126
Msa1326290 AT1G06410.1 63.077 845 296 4 1 837 1 837 0.0 1126
Msa1326290 AT1G06410.2 63.077 845 296 4 1 837 1 837 0.0 1126
Msa1326290 AT2G18700.1 60.327 857 326 6 1 851 1 849 0.0 1080
Msa1326290 AT1G68020.1 63.476 679 231 4 1 662 1 679 0.0 915
Msa1326290 AT1G16980.1 35.688 807 458 24 48 834 7 772 7.25e-146 451
Msa1326290 AT4G27550.2 33.052 829 469 22 51 838 2 785 2.45e-133 417
Msa1326290 AT4G27550.1 32.931 829 477 22 52 838 3 794 1.29e-132 416
Msa1326290 AT1G78580.4 33.805 778 432 20 52 800 91 814 2.78e-132 419
Msa1326290 AT1G78580.1 33.805 778 432 20 52 800 91 814 2.78e-132 419
Msa1326290 AT1G78580.2 33.805 778 432 20 52 800 91 814 2.78e-132 419
Msa1326290 AT1G78580.3 33.805 778 432 20 52 800 91 814 2.78e-132 419
Msa1326290 AT1G16980.2 35.266 638 362 18 48 675 7 603 1.46e-118 374

Find 235 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGTGGATCAGATTCTTTC+TGG 0.076554 8_4:-40420625 Msa1326290:three_prime_UTR
ACAACTTCACCCTGCAAATT+TGG 0.106547 8_4:+40422412 None:intergenic
ACATGTATAGTTACATTATT+TGG 0.165580 8_4:-40420411 Msa1326290:three_prime_UTR
TGGGGAATTGGTCTGGGCTT+GGG 0.169334 8_4:-40421833 Msa1326290:CDS
CTGGGGAATTGGTCTGGGCT+TGG 0.187166 8_4:-40421834 Msa1326290:CDS
CAAGATGCAGACCCTGATTT+TGG 0.207528 8_4:-40421279 Msa1326290:CDS
AAGAGGATCAATGAAATTTA+TGG 0.210673 8_4:-40422310 Msa1326290:CDS
ACTATACATGTTTGAAATTT+CGG 0.241341 8_4:+40420423 None:intergenic
ACATCAATTGTTATATTTAC+TGG 0.255436 8_4:-40420519 Msa1326290:three_prime_UTR
CCAAGGGTTATGACTGTTCC+TGG 0.261011 8_4:-40423402 Msa1326290:CDS
GGGGAATTGGTCTGGGCTTG+GGG 0.266295 8_4:-40421832 Msa1326290:CDS
ATAAATCCTGCAAGGGGTTC+AGG 0.270561 8_4:-40422376 Msa1326290:CDS
TTACATACATAATTCTATTA+TGG 0.271576 8_4:-40420388 Msa1326290:three_prime_UTR
TTGAGAATTTCATCCCTTAC+TGG 0.274615 8_4:+40422775 None:intergenic
CTCTAAGCTAAAAGAGATTC+AGG 0.278734 8_4:-40422539 Msa1326290:CDS
CTTCTCTGAGTGGGGCCATC+AGG 0.282889 8_4:-40422045 Msa1326290:CDS
GATGCCATGCAAACCGATTC+AGG 0.283524 8_4:+40420599 None:intergenic
AAAGATAAGAAAGTTATTCT+TGG 0.285155 8_4:-40422508 Msa1326290:CDS
CTGGAATTGGGCAAGATGTT+TGG 0.285774 8_4:+40420779 None:intergenic
GAATCAGATGTTAGTTCTTC+TGG 0.292836 8_4:-40423357 Msa1326290:CDS
GCAAAGATCATTATACTAAA+AGG 0.294692 8_4:-40421859 Msa1326290:CDS
CAAGTGGTCCAGCAATTCTT+TGG 0.301605 8_4:+40421245 None:intergenic
ACCCTAGACAAAAGCTTATT+AGG 0.311946 8_4:+40420316 None:intergenic
ATAACCCTTGGAAGACTTCT+TGG 0.323153 8_4:+40423414 None:intergenic
TGAGAAGGTTCTCTTGAATA+TGG 0.324266 8_4:-40421033 Msa1326290:CDS
TACTCATGATGTGGCATATT+GGG 0.324520 8_4:-40421915 Msa1326290:CDS
TCCCATCATCTGAAATTTAC+CGG 0.324934 8_4:-40422804 Msa1326290:CDS
CAGCAATTCTTTGGCTTGGC+AGG 0.325831 8_4:+40421254 None:intergenic
CAACTTCACCCTGCAAATTT+GGG 0.326749 8_4:+40422413 None:intergenic
CACGAAATCTGGTGGATTAC+CGG 0.327222 8_4:+40421004 None:intergenic
TCCTTCCCTGAACCCCTTGC+AGG 0.330095 8_4:+40422370 None:intergenic
TTTAGTATAATGATCTTTGC+AGG 0.332751 8_4:+40421862 None:intergenic
GCTTGGCAGGAGCCAAAATC+AGG 0.332771 8_4:+40421267 None:intergenic
GTGTGGATCAGATTCTTTCT+GGG 0.339981 8_4:-40420624 Msa1326290:three_prime_UTR
ACTAAAAGGTGCTGGGGAAT+TGG 0.344491 8_4:-40421845 Msa1326290:CDS
TCTCAAAAGAAACCTGGAAT+TGG 0.347950 8_4:+40420766 None:intergenic
AAGGTGCTGGGGAATTGGTC+TGG 0.348234 8_4:-40421840 Msa1326290:CDS
TGGAATTGGGCAAGATGTTT+GGG 0.350397 8_4:+40420780 None:intergenic
CTTGTTGTGTCTGAGTTCAT+TGG 0.350593 8_4:-40422076 Msa1326290:CDS
GAGATATTGATACTGCTAAA+TGG 0.353153 8_4:-40423281 Msa1326290:CDS
CCAATGCACATCACGAAATC+TGG 0.354845 8_4:+40420993 None:intergenic
CGATTTCATCGAGTTAAACT+TGG 0.356832 8_4:-40422847 Msa1326290:CDS
GGGTTCAGGGAAGGATGTTC+AGG 0.357166 8_4:-40422362 Msa1326290:CDS
TTGTTGAATTCGGATTTAAT+TGG 0.359446 8_4:-40422748 Msa1326290:CDS
ATTTGTTTGCGGATCTTGAT+TGG 0.360978 8_4:-40421395 Msa1326290:CDS
TTAAGCACAGATATGACTTC+AGG 0.363121 8_4:+40421662 None:intergenic
GGGATTATTTCTGACCTTGA+TGG 0.367224 8_4:-40423381 Msa1326290:CDS
CTGCCAAGCCAAAGAATTGC+TGG 0.368870 8_4:-40421253 Msa1326290:CDS
TCTCAAAGGATTGTTGAATT+CGG 0.369451 8_4:-40422758 Msa1326290:CDS
CATACAAAAGAACTAGTAGA+AGG 0.371718 8_4:-40421748 Msa1326290:CDS
AATATCGTGTTCATTGTTAG+TGG 0.373245 8_4:-40421617 Msa1326290:CDS
TTCTTTCTGGGCTCCTGAAT+CGG 0.378445 8_4:-40420612 Msa1326290:three_prime_UTR
ATAAGCACTCTTCTCGAAAC+GGG 0.382221 8_4:+40422243 None:intergenic
TTTAGCTTAGAGGATGTAGA+AGG 0.386302 8_4:+40422550 None:intergenic
AGCATATGGGTAGCATATAA+TGG 0.386638 8_4:+40423028 None:intergenic
CAAACATCTTGCCCAATTCC+AGG 0.387739 8_4:-40420778 Msa1326290:CDS
GGGCCATCAGGGTCAATCCC+TGG 0.389275 8_4:-40422033 Msa1326290:CDS
ATAAATTTCATTGATCCTCT+TGG 0.390480 8_4:+40422312 None:intergenic
TAACCCTTGGAAGACTTCTT+GGG 0.392932 8_4:+40423415 None:intergenic
TATGAATTTAGCCCTCAGTA+TGG 0.393080 8_4:-40421987 Msa1326290:CDS
TAACGGCGACGGCGAGATTC+CGG 0.394430 8_4:+40425365 None:intergenic
GCAGCAGAACCCAAATTTGC+AGG 0.398626 8_4:-40422422 Msa1326290:CDS
GATGTTGTAAAGTTGCTTGA+TGG 0.401203 8_4:-40420828 Msa1326290:CDS
CTGCAAACAATATATTTGTA+TGG 0.405626 8_4:+40422163 None:intergenic
GAATCTAAGCGCGGACATAT+AGG 0.407020 8_4:-40422658 Msa1326290:CDS
CTTCTCAGCTACCAAACCTT+TGG 0.411552 8_4:+40421049 None:intergenic
GCCATCTTTCTTGATTATGA+TGG 0.412733 8_4:-40421725 Msa1326290:CDS
ATCATTATACTAAAAGGTGC+TGG 0.413565 8_4:-40421853 Msa1326290:CDS
GGCAGGCCAAACAGCATTGT+TGG 0.415116 8_4:-40420730 Msa1326290:three_prime_UTR
GTTGTTCACCTTCTCTGAGT+GGG 0.416077 8_4:-40422054 Msa1326290:CDS
GTCCGGTAAATTTCAGATGA+TGG 0.420016 8_4:+40422802 None:intergenic
TTCTATTACAATTAAAAGAC+GGG 0.420368 8_4:-40423233 Msa1326290:CDS
ATCACCATGATCTGAGCATA+TGG 0.421283 8_4:+40423014 None:intergenic
CTCAAAAGAAACCTGGAATT+GGG 0.424009 8_4:+40420767 None:intergenic
TGAAATTGCTCAGAGATTAC+TGG 0.424931 8_4:-40423142 Msa1326290:CDS
GTACTCATGATGTGGCATAT+TGG 0.429323 8_4:-40421916 Msa1326290:CDS
TTCTTAAGTGTAAAGGTGTA+TGG 0.435154 8_4:+40420209 None:intergenic
CAAGAGATTCTCTGAATGAA+TGG 0.436703 8_4:-40421589 Msa1326290:CDS
CAATATATTTGTATGGGACT+AGG 0.441769 8_4:+40422170 None:intergenic
CTGCTAAATGGTGTTTCAGT+TGG 0.444648 8_4:-40423269 Msa1326290:CDS
CAAATATATTGTTTGCAGAC+AGG 0.445837 8_4:-40422158 Msa1326290:CDS
CTTTGACCGAGTGCTTTGGC+AGG 0.445978 8_4:-40422989 Msa1326290:CDS
TTTACCGGACTTTGCCAGTA+AGG 0.446014 8_4:-40422789 Msa1326290:CDS
CAGACAGGGAACTGCAAAGC+TGG 0.446931 8_4:-40422143 Msa1326290:CDS
ATGTTAGTTCTTCTGGATGT+CGG 0.447873 8_4:-40423350 Msa1326290:CDS
CTGCAGGTCATGGGGTAGAA+AGG 0.448467 8_4:+40423098 None:intergenic
GAATCGGTTTGCATGGCATC+AGG 0.449527 8_4:-40420596 Msa1326290:three_prime_UTR
GGTGGAATAGCGACTCTGAA+TGG 0.451271 8_4:-40421428 Msa1326290:CDS
ATCGCTTTGACCGAGTGCTT+TGG 0.451315 8_4:-40422993 Msa1326290:CDS
TGCGGATCTTGATTGGAAAC+AGG 0.453319 8_4:-40421388 Msa1326290:CDS
CATATAGGACTTGATTACTT+TGG 0.456053 8_4:-40422643 Msa1326290:CDS
AACGAACCAACAATGCTGTT+TGG 0.456508 8_4:+40420724 None:intergenic
ACAGGGAGTAACCAAAGGTT+TGG 0.457006 8_4:-40421060 Msa1326290:intron
GTTTACATCATGCAAACTGC+TGG 0.460290 8_4:-40421567 Msa1326290:CDS
ACAAAATCGCACTATTTGTC+AGG 0.461378 8_4:+40420649 None:intergenic
CCAGATTTCGTGATGTGCAT+TGG 0.463267 8_4:-40420993 Msa1326290:CDS
GGCAAACATGTTGCCGCTGC+AGG 0.463803 8_4:-40423310 Msa1326290:CDS
TGAAGTCAAGGAAAGTGCTT+TGG 0.467204 8_4:-40421313 Msa1326290:CDS
TAAATCCTGCAAGGGGTTCA+GGG 0.467451 8_4:-40422375 Msa1326290:CDS
CACAGATATGACTTCAGGGC+TGG 0.467927 8_4:+40421667 None:intergenic
TGTTAGTTCTTCTGGATGTC+GGG 0.472937 8_4:-40423349 Msa1326290:CDS
CAAAGGTTTGGTAGCTGAGA+AGG 0.472991 8_4:-40421048 Msa1326290:CDS
AGGTGCTGGGGAATTGGTCT+GGG 0.473831 8_4:-40421839 Msa1326290:CDS
CTGTGCTCTCAAAAGAAACC+TGG 0.476062 8_4:+40420760 None:intergenic
AGAGTTATTTCACTTTCTCA+TGG 0.477242 8_4:-40421806 Msa1326290:CDS
CTGCAGTAGAATGCTAGGTC+TGG 0.477809 8_4:-40422686 Msa1326290:CDS
GTTGCATCGTCAATGCTGTA+AGG 0.478965 8_4:-40422204 Msa1326290:CDS
AGTACAAGCAACGATCAATC+AGG 0.478979 8_4:+40420458 None:intergenic
TTCTCTGAGTGGGGCCATCA+GGG 0.481545 8_4:-40422044 Msa1326290:CDS
ATGAATTTAGCCCTCAGTAT+GGG 0.482655 8_4:-40421986 Msa1326290:CDS
CAAGGGTTATGACTGTTCCT+GGG 0.488044 8_4:-40423401 Msa1326290:CDS
CAAAGAATTGCTGGACCACT+TGG 0.490557 8_4:-40421244 Msa1326290:CDS
TCTTGCTGCAGTAGAATGCT+AGG 0.494534 8_4:-40422691 Msa1326290:CDS
AGCAACTGCATCTATATCCC+AGG 0.496254 8_4:+40422015 None:intergenic
GTTGAAGTTCTTAAGTGTAA+AGG 0.497670 8_4:+40420202 None:intergenic
GAGAGCACAGTTTCTTAGGC+AGG 0.499109 8_4:-40420747 Msa1326290:exon
TCCGGTAAATTTCAGATGAT+GGG 0.500703 8_4:+40422803 None:intergenic
TCAAATTATAAATCCTGCAA+GGG 0.500735 8_4:-40422383 Msa1326290:CDS
TCTGTATACGACTGCATGAC+AGG 0.500792 8_4:+40421357 None:intergenic
GGTCCAGCAATTCTTTGGCT+TGG 0.501011 8_4:+40421250 None:intergenic
GGCTCCTGAATCGGTTTGCA+TGG 0.501103 8_4:-40420603 Msa1326290:three_prime_UTR
ACCCAAACAAAATCATCATC+GGG 0.501271 8_4:+40422913 None:intergenic
TGCTAAATGGTGTTTCAGTT+GGG 0.502656 8_4:-40423268 Msa1326290:CDS
CATCCCTTACTGGCAAAGTC+CGG 0.504874 8_4:+40422785 None:intergenic
CTCTTGAATATGGTTAATGC+CGG 0.507275 8_4:-40421023 Msa1326290:CDS
GCCGTCGCCGTTACCGTCGC+CGG 0.507426 8_4:-40425355 Msa1326290:intron
ATTCTATTACAATTAAAAGA+CGG 0.514519 8_4:-40423234 Msa1326290:CDS
AATAAGCACTCTTCTCGAAA+CGG 0.515130 8_4:+40422242 None:intergenic
CTACCCATATGCTCAGATCA+TGG 0.515637 8_4:-40423018 Msa1326290:CDS
AACCCAAACAAAATCATCAT+CGG 0.516929 8_4:+40422912 None:intergenic
TCGTGTTCATTGTTAGTGGA+AGG 0.517631 8_4:-40421613 Msa1326290:CDS
GAACCAGCAATTGTTAAAAG+AGG 0.517681 8_4:-40421204 Msa1326290:CDS
ACAGATATGACTTCAGGGCT+GGG 0.520588 8_4:+40421668 None:intergenic
GTGGAATAGCGACTCTGAAT+GGG 0.520863 8_4:-40421427 Msa1326290:CDS
AAATATATTGTTTGCAGACA+GGG 0.522683 8_4:-40422157 Msa1326290:CDS
ATGGTGTTTCAGTTGGGATG+AGG 0.523696 8_4:-40423262 Msa1326290:CDS
TAAGCACAGATATGACTTCA+GGG 0.524391 8_4:+40421663 None:intergenic
GGCCATCAGGGTCAATCCCT+GGG 0.525071 8_4:-40422032 Msa1326290:CDS
GAAGGTTGACGTGTGGTTCG+AGG 0.526649 8_4:-40420574 Msa1326290:three_prime_UTR
GTTCTTCTGGATGTCGGGAG+CGG 0.526826 8_4:-40423344 Msa1326290:CDS
TCATTATACTAAAAGGTGCT+GGG 0.528112 8_4:-40421852 Msa1326290:CDS
TGCTGATACAATATGGTCAA+TGG 0.528241 8_4:+40421769 None:intergenic
GGAAACAAGTCATTTGTTTG+CGG 0.528499 8_4:-40421406 Msa1326290:CDS
TTCAAATTATAAATCCTGCA+AGG 0.529329 8_4:-40422384 Msa1326290:CDS
ATCGTCAATGCTGTAAGGGA+TGG 0.532615 8_4:-40422199 Msa1326290:CDS
TGGATCTAATATTGAAGTCA+AGG 0.535654 8_4:-40421325 Msa1326290:CDS
CATTGTTGGTTCGTTATGCG+AGG 0.536774 8_4:-40420716 Msa1326290:three_prime_UTR
TGAGATAGATGCTAGTGAGC+AGG 0.537498 8_4:-40423166 Msa1326290:CDS
CCAGGAACAGTCATAACCCT+TGG 0.540553 8_4:+40423402 None:intergenic
GCTTAACTTCAACAATATGC+TGG 0.541548 8_4:+40421181 None:intergenic
CAATCTGAAATTTCTAGCTG+TGG 0.541729 8_4:-40422455 Msa1326290:CDS
GAACTTACCGGCGACGGTAA+CGG 0.543690 8_4:+40425348 None:intergenic
GCCATCATAATCAAGAAAGA+TGG 0.544414 8_4:+40421724 None:intergenic
TTGTTCACCTTCTCTGAGTG+GGG 0.546280 8_4:-40422053 Msa1326290:CDS
TATTGTTGAAGTTAAGCCAC+AGG 0.548984 8_4:-40421175 Msa1326290:intron
CAGATATGACTTCAGGGCTG+GGG 0.549497 8_4:+40421669 None:intergenic
CTGGGACTTGCAGCTGAACA+TGG 0.550416 8_4:-40421548 Msa1326290:CDS
AATCGTTTCCTCAAGAAAGT+AGG 0.550967 8_4:+40422865 None:intergenic
TAAGAAAGTTATTCTTGGTG+TGG 0.551636 8_4:-40422503 Msa1326290:CDS
TGAATTTAGCCCTCAGTATG+GGG 0.553092 8_4:-40421985 Msa1326290:CDS
TGCAAACAATATATTTGTAT+GGG 0.553617 8_4:+40422164 None:intergenic
GGAAGACTTCTTGGGGTGTG+AGG 0.553746 8_4:+40423423 None:intergenic
TGCAAAGCTGGATGAAGCTG+TGG 0.555064 8_4:-40422131 Msa1326290:CDS
ACTGGTGCTTCATTGAGCAT+CGG 0.556417 8_4:-40420501 Msa1326290:three_prime_UTR
CACTACGCGTTTCACCTCAC+CGG 0.557659 8_4:-40425384 Msa1326290:five_prime_UTR
TTACCGGACTTTGCCAGTAA+GGG 0.558832 8_4:-40422788 Msa1326290:CDS
CATAAGCCTGCCAAAGCACT+CGG 0.561670 8_4:+40422983 None:intergenic
AATCTATGTGGGTTCGCTCA+AGG 0.563455 8_4:-40423190 Msa1326290:CDS
TGATACTGAGGTAATCTATG+TGG 0.564061 8_4:-40423202 Msa1326290:CDS
TCACCATGATCTGAGCATAT+GGG 0.565672 8_4:+40423015 None:intergenic
ACCGGCGACGGTAACGGCGA+CGG 0.567252 8_4:+40425354 None:intergenic
GAGCGGTCAATGATAATGAC+TGG 0.567271 8_4:+40422271 None:intergenic
TCAAGGTCAGAAATAATCCC+AGG 0.567364 8_4:+40423384 None:intergenic
CGTGTTCATTGTTAGTGGAA+GGG 0.567716 8_4:-40421612 Msa1326290:CDS
TCCTGCAAGGGGTTCAGGGA+AGG 0.568476 8_4:-40422371 Msa1326290:CDS
GGTTGTTCACCTTCTCTGAG+TGG 0.569153 8_4:-40422055 Msa1326290:CDS
GATTTCATCGAGTTAAACTT+GGG 0.570858 8_4:-40422846 Msa1326290:CDS
CAGGATTTATAATTTGAACA+AGG 0.572858 8_4:+40422389 None:intergenic
AATATTTGCAGACAAAGTCA+TGG 0.573166 8_4:-40422947 Msa1326290:CDS
GATACTGAGGTAATCTATGT+GGG 0.575365 8_4:-40423201 Msa1326290:CDS
TATTCTTGGTGTGGACGACA+TGG 0.577773 8_4:-40422494 Msa1326290:CDS
AGATATGACTTCAGGGCTGG+GGG 0.578681 8_4:+40421670 None:intergenic
CATATCGATAGTGTTTCTCA+TGG 0.584215 8_4:+40421942 None:intergenic
TCTTTACAGGGAGTAACCAA+AGG 0.585367 8_4:-40421065 Msa1326290:intron
TTTGATTTGTTGAGGTAGCG+AGG 0.586241 8_4:+40420805 None:intergenic
CGGTAGGAATTCACATGGGT+AGG 0.588120 8_4:-40422594 Msa1326290:CDS
ATCCCAGGGATTGACCCTGA+TGG 0.588505 8_4:+40422030 None:intergenic
ATACAAAAGAACTAGTAGAA+GGG 0.590862 8_4:-40421747 Msa1326290:CDS
AACCCTTGGAAGACTTCTTG+GGG 0.592251 8_4:+40423416 None:intergenic
TCGTATACAGAAGCAACTGA+TGG 0.593251 8_4:-40421345 Msa1326290:CDS
ATTGTTGGTTCGTTATGCGA+GGG 0.595063 8_4:-40420715 Msa1326290:three_prime_UTR
ACACCCCAAGAAGTCTTCCA+AGG 0.595682 8_4:-40423419 Msa1326290:CDS
CTACCCATGTGAATTCCTAC+CGG 0.597503 8_4:+40422595 None:intergenic
CGGTTTGCATGGCATCAGGA+AGG 0.601497 8_4:-40420592 Msa1326290:three_prime_UTR
ATGATGGGAAAGGACTATGA+AGG 0.602097 8_4:+40422818 None:intergenic
AAGCTTATTTAATTGCCAAG+AGG 0.604527 8_4:-40422327 Msa1326290:CDS
CGGGAGCTGATGGTAACGAC+GGG 0.607532 8_4:+40420916 None:intergenic
TAAATTTCAGATGATGGGAA+AGG 0.607697 8_4:+40422808 None:intergenic
GTAAGGGATGAAATTCTCAA+AGG 0.608917 8_4:-40422772 Msa1326290:CDS
CAAATTATAAATCCTGCAAG+GGG 0.610053 8_4:-40422382 Msa1326290:CDS
TTTACATCATGCAAACTGCT+GGG 0.611466 8_4:-40421566 Msa1326290:CDS
TGGAAAGAACAAAATGAGAA+CGG 0.611607 8_4:+40425456 None:intergenic
ATGCACATCACGAAATCTGG+TGG 0.613992 8_4:+40420996 None:intergenic
CTGATGGCCCCACTCAGAGA+AGG 0.614227 8_4:+40422046 None:intergenic
TGATGTGCATTGGAGATGAT+AGG 0.616649 8_4:-40420983 Msa1326290:CDS
CATTATACTAAAAGGTGCTG+GGG 0.617606 8_4:-40421851 Msa1326290:CDS
CAGCAGAACCCAAATTTGCA+GGG 0.618312 8_4:-40422421 Msa1326290:CDS
TAACATCTGATTCACCATCA+AGG 0.622114 8_4:+40423367 None:intergenic
ATATGTTAGTACTCATGATG+TGG 0.622726 8_4:-40421924 Msa1326290:CDS
CAGGTCATGGGGTAGAAAGG+TGG 0.624978 8_4:+40423101 None:intergenic
ACTGGATGACTTTAATTGCG+TGG 0.625192 8_4:-40423124 Msa1326290:CDS
CTTGGCAGGAGCCAAAATCA+GGG 0.629827 8_4:+40421268 None:intergenic
TCGTCAATGCTGTAAGGGAT+GGG 0.634025 8_4:-40422198 Msa1326290:CDS
GAATTTAGCCCTCAGTATGG+GGG 0.635859 8_4:-40421984 Msa1326290:CDS
GGTAGGTAGGAAGCCTAGCA+AGG 0.637239 8_4:-40420877 Msa1326290:CDS
GGTAGCATATAATGGAAGAG+AGG 0.639482 8_4:+40423036 None:intergenic
AAGTAGGCAAAATCATCAAG+TGG 0.641749 8_4:+40422881 None:intergenic
CACCCCAAGAAGTCTTCCAA+GGG 0.641869 8_4:-40423418 Msa1326290:CDS
GCAACTGCATCTATATCCCA+GGG 0.642398 8_4:+40422016 None:intergenic
GAGTTTGAACTTACCGGCGA+CGG 0.649294 8_4:+40425342 None:intergenic
TCAAGGAAAGTGCTTTGGTG+TGG 0.650646 8_4:-40421308 Msa1326290:CDS
TAGCAAGAACACTTTCCAAG+TGG 0.651389 8_4:+40421229 None:intergenic
TCGGGAGCTGATGGTAACGA+CGG 0.659800 8_4:+40420915 None:intergenic
TTTGCCGGTAGGAATTCACA+TGG 0.662631 8_4:-40422599 Msa1326290:CDS
TTGCATCGTCAATGCTGTAA+GGG 0.663687 8_4:-40422203 Msa1326290:CDS
TAAGCACTCTTCTCGAAACG+GGG 0.682811 8_4:+40422244 None:intergenic
GCAAAGCTGGATGAAGCTGT+GGG 0.684464 8_4:-40422130 Msa1326290:CDS
ACAACAAGCATGCTTGTACG+AGG 0.685754 8_4:+40422091 None:intergenic
TCGGGAGCGGAAAATCATTG+TGG 0.689766 8_4:-40423331 Msa1326290:CDS
TCTCGAAACGGGGAACAGAG+CGG 0.692951 8_4:+40422254 None:intergenic
GGATCTTGATTGGAAACAGG+TGG 0.695331 8_4:-40421385 Msa1326290:CDS
GCATCAGGAAGGTTGACGTG+TGG 0.697540 8_4:-40420581 Msa1326290:three_prime_UTR
CTGGACTATGAATCTAAGCG+CGG 0.708845 8_4:-40422667 Msa1326290:CDS
TTGCCGGTAGGAATTCACAT+GGG 0.730503 8_4:-40422598 Msa1326290:CDS
GCGACGGCGAGATTCCGGTG+AGG 0.774027 8_4:+40425370 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GGAATATTTTTTTTTATTTT+TGG - chr8_4:40420810-40420829 Msa1326290:CDS 10.0%
!!! ATTTTTTTTTATTTTTGGTT+TGG - chr8_4:40420815-40420834 Msa1326290:CDS 10.0%
!!! TATATTTTTTTCTATTCTTT+TGG + chr8_4:40424156-40424175 None:intergenic 10.0%
!!! GGAAAATTTTAATTTGATTT+TGG - chr8_4:40420867-40420886 Msa1326290:CDS 15.0%
!! ATTTGTTTGTATTTGAATAA+AGG - chr8_4:40421029-40421048 Msa1326290:CDS 15.0%
!! TTTGTTTGTATTTGAATAAA+GGG - chr8_4:40421030-40421049 Msa1326290:CDS 15.0%
!! TGTACATGTTATTATAAATT+TGG - chr8_4:40421071-40421090 Msa1326290:intron 15.0%
!! ATTATAAATTTGGAAAATGA+TGG - chr8_4:40421081-40421100 Msa1326290:intron 15.0%
!!! AAAGTTACTTTGTTTAATTT+TGG - chr8_4:40421593-40421612 Msa1326290:CDS 15.0%
!! AAATGAATGAATTATTACAA+GGG - chr8_4:40421938-40421957 Msa1326290:CDS 15.0%
!!! TAGTATGTTAAATTTTTACA+TGG - chr8_4:40422009-40422028 Msa1326290:CDS 15.0%
!! ATTCTATTACAATTAAAAGA+CGG - chr8_4:40422395-40422414 Msa1326290:CDS 15.0%
!!! AAATTTTGATAAATATAGTG+CGG + chr8_4:40423012-40423031 None:intergenic 15.0%
!!! TATATTTATCAAAATTTTGC+CGG - chr8_4:40423015-40423034 Msa1326290:CDS 15.0%
!!! GTTTTATTAATATAAGATTG+TGG + chr8_4:40423940-40423959 None:intergenic 15.0%
!!! TAATGTATTTTTTTATTTGC+AGG - chr8_4:40424180-40424199 Msa1326290:intron 15.0%
!! TTACATACATAATTCTATTA+TGG - chr8_4:40425241-40425260 Msa1326290:intron 15.0%
!! CAACAATTGAATTGAAAAAA+CGG + chr8_4:40420378-40420397 None:intergenic 20.0%
!!! ATATTATTTTTCATCGTGTT+TGG - chr8_4:40420646-40420665 Msa1326290:three_prime_UTR 20.0%
!! GTAAATAAAATTATTGGGTT+TGG + chr8_4:40420683-40420702 None:intergenic 20.0%
!! CTTTGTGAAAAAAAAAATTG+TGG - chr8_4:40420789-40420808 Msa1326290:CDS 20.0%
!! AGGTTAAGATAATTGAAATA+GGG - chr8_4:40420846-40420865 Msa1326290:CDS 20.0%
!!! GTTTTTTTTTCAGAAGAAAA+AGG - chr8_4:40420924-40420943 Msa1326290:CDS 20.0%
!! AAAAAATTACATCTTACAAG+TGG + chr8_4:40421335-40421354 None:intergenic 20.0%
!!! TTTTTGTTTTCATGTTTACA+TGG - chr8_4:40421370-40421389 Msa1326290:CDS 20.0%
!! TTAAACAAAGTAACTTTACT+TGG + chr8_4:40421590-40421609 None:intergenic 20.0%
!! TCAAGCATTTATTTCATTAT+AGG + chr8_4:40421622-40421641 None:intergenic 20.0%
!! GTAATAATTCATTCATTTCA+GGG + chr8_4:40421936-40421955 None:intergenic 20.0%
!! TGTAATAATTCATTCATTTC+AGG + chr8_4:40421937-40421956 None:intergenic 20.0%
!! GAAATGAATGAATTATTACA+AGG - chr8_4:40421937-40421956 Msa1326290:CDS 20.0%
!! TTCTATTACAATTAAAAGAC+GGG - chr8_4:40422396-40422415 Msa1326290:CDS 20.0%
!! AAAGATAAGAAAGTTATTCT+TGG - chr8_4:40423121-40423140 Msa1326290:CDS 20.0%
!! TGCAAACAATATATTTGTAT+GGG + chr8_4:40423468-40423487 None:intergenic 20.0%
!!! TTTTTTTCTATTCTTTTGGT+GGG + chr8_4:40424152-40424171 None:intergenic 20.0%
!!! ATTTTTTTCTATTCTTTTGG+TGG + chr8_4:40424153-40424172 None:intergenic 20.0%
!! ACATCAATTGTTATATTTAC+TGG - chr8_4:40425110-40425129 Msa1326290:intron 20.0%
!!! ACTATACATGTTTGAAATTT+CGG + chr8_4:40425209-40425228 None:intergenic 20.0%
!! ACATGTATAGTTACATTATT+TGG - chr8_4:40425218-40425237 Msa1326290:intron 20.0%
!! TACTCATTTTCTAAACTCTT+TGG - chr8_4:40420402-40420421 Msa1326290:three_prime_UTR 25.0%
! ATAGTAAACGATGAACAATT+TGG + chr8_4:40420523-40420542 None:intergenic 25.0%
! TTCACAAAGTGTAAACTTAT+AGG + chr8_4:40420778-40420797 None:intergenic 25.0%
!!! TTTTTGGTTTGGATAATAAC+AGG - chr8_4:40420826-40420845 Msa1326290:CDS 25.0%
! CAGGTTAAGATAATTGAAAT+AGG - chr8_4:40420845-40420864 Msa1326290:CDS 25.0%
!! TGGTTTAGATAAGTTTTTGT+TGG - chr8_4:40420887-40420906 Msa1326290:CDS 25.0%
!! GGTTTAGATAAGTTTTTGTT+GGG - chr8_4:40420888-40420907 Msa1326290:CDS 25.0%
!! GTTTAGATAAGTTTTTGTTG+GGG - chr8_4:40420889-40420908 Msa1326290:CDS 25.0%
!!! TTTTTTTCAGAAGAAAAAGG+TGG - chr8_4:40420927-40420946 Msa1326290:CDS 25.0%
! GTATAATTGATGAATGTACT+TGG - chr8_4:40420954-40420973 Msa1326290:CDS 25.0%
!! TGTACTTGGATTGAAATTTT+TGG - chr8_4:40420968-40420987 Msa1326290:CDS 25.0%
! ACATCCAAAAAAACACATAA+TGG + chr8_4:40420995-40421014 None:intergenic 25.0%
!!! ATTATGTGTTTTTTTGGATG+TGG - chr8_4:40420994-40421013 Msa1326290:CDS 25.0%
! ATTATCTATCATGTTCAAAG+TGG - chr8_4:40421232-40421251 Msa1326290:CDS 25.0%
!!! TTCAAAGTGGTTTAAGTTTT+CGG - chr8_4:40421245-40421264 Msa1326290:CDS 25.0%
! CCAAATGAATATCATGTAAA+AGG + chr8_4:40421399-40421418 None:intergenic 25.0%
!! CCTTTTACATGATATTCATT+TGG - chr8_4:40421396-40421415 Msa1326290:CDS 25.0%
! TAAAAAGTGAAACACTTACA+GGG + chr8_4:40421460-40421479 None:intergenic 25.0%
! TTAACATACTACATCTTACA+TGG + chr8_4:40422000-40422019 None:intergenic 25.0%
! ATCCTACGAATAATATATCA+CGG + chr8_4:40422039-40422058 None:intergenic 25.0%
! ACAGATTAACACAACATTTA+CGG + chr8_4:40422067-40422086 None:intergenic 25.0%
! TTGTTGAATTCGGATTTAAT+TGG - chr8_4:40422881-40422900 Msa1326290:CDS 25.0%
! CAGGATTTATAATTTGAACA+AGG + chr8_4:40423243-40423262 None:intergenic 25.0%
! TTCAAATTATAAATCCTGCA+AGG - chr8_4:40423245-40423264 Msa1326290:CDS 25.0%
! TCAAATTATAAATCCTGCAA+GGG - chr8_4:40423246-40423265 Msa1326290:CDS 25.0%
! ATAAATTTCATTGATCCTCT+TGG + chr8_4:40423320-40423339 None:intergenic 25.0%
! AAGAGGATCAATGAAATTTA+TGG - chr8_4:40423319-40423338 Msa1326290:CDS 25.0%
! CTGCAAACAATATATTTGTA+TGG + chr8_4:40423469-40423488 None:intergenic 25.0%
! AAATATATTGTTTGCAGACA+GGG - chr8_4:40423472-40423491 Msa1326290:CDS 25.0%
! TTTAGTATAATGATCTTTGC+AGG + chr8_4:40423770-40423789 None:intergenic 25.0%
! GCAAAGATCATTATACTAAA+AGG - chr8_4:40423770-40423789 Msa1326290:intron 25.0%
!! TTTTGTATGCTGATACAATA+TGG + chr8_4:40423870-40423889 None:intergenic 25.0%
! ATACAAAAGAACTAGTAGAA+GGG - chr8_4:40423882-40423901 Msa1326290:intron 25.0%
!! AACAATGAACACGATATTTT+TGG + chr8_4:40424010-40424029 None:intergenic 25.0%
!!! TTTTTTCTATTCTTTTGGTG+GGG + chr8_4:40424151-40424170 None:intergenic 25.0%
!!! TGTATTTTTTTATTTGCAGG+TGG - chr8_4:40424183-40424202 Msa1326290:intron 25.0%
!! TCATGAATTTTCTCTTTACA+GGG - chr8_4:40424552-40424571 Msa1326290:intron 25.0%
! TAAAAAAATTCAAGTGAGTC+TGG - chr8_4:40425460-40425479 Msa1326290:five_prime_UTR 25.0%
TGGAAAGAACAAAATGAGAA+CGG + chr8_4:40420176-40420195 None:intergenic 30.0%
AAATCTTCAGTAGTGAAAAG+TGG + chr8_4:40420330-40420349 None:intergenic 30.0%
!!! TGGACCATTATGTGTTTTTT+TGG - chr8_4:40420988-40421007 Msa1326290:CDS 30.0%
! ATAAAGGGTTTCTTTTTCTG+TGG - chr8_4:40421045-40421064 Msa1326290:CDS 30.0%
AAAATGATGGCACATGAATT+TGG - chr8_4:40421094-40421113 Msa1326290:intron 30.0%
TGTCTGTAATAGTAGTTTAG+AGG - chr8_4:40421202-40421221 Msa1326290:CDS 30.0%
GTAAAAAGTGAAACACTTAC+AGG + chr8_4:40421461-40421480 None:intergenic 30.0%
! TTTACACGATTTTCATCTAG+TGG - chr8_4:40421476-40421495 Msa1326290:intron 30.0%
AATAAACAACGCAATTCAGA+TGG + chr8_4:40421843-40421862 None:intergenic 30.0%
TCCTACGAATAATATATCAC+GGG + chr8_4:40422038-40422057 None:intergenic 30.0%
GAGATATTGATACTGCTAAA+TGG - chr8_4:40422348-40422367 Msa1326290:CDS 30.0%
AATATTTGCAGACAAAGTCA+TGG - chr8_4:40422682-40422701 Msa1326290:CDS 30.0%
AACCCAAACAAAATCATCAT+CGG + chr8_4:40422720-40422739 None:intergenic 30.0%
GATTTCATCGAGTTAAACTT+GGG - chr8_4:40422783-40422802 Msa1326290:CDS 30.0%
!! TAAATTTCAGATGATGGGAA+AGG + chr8_4:40422824-40422843 None:intergenic 30.0%
TCTCAAAGGATTGTTGAATT+CGG - chr8_4:40422871-40422890 Msa1326290:CDS 30.0%
CATATAGGACTTGATTACTT+TGG - chr8_4:40422986-40423005 Msa1326290:CDS 30.0%
! TTTATCAAAATTTTGCCGGT+AGG - chr8_4:40423019-40423038 Msa1326290:CDS 30.0%
TAAGAAAGTTATTCTTGGTG+TGG - chr8_4:40423126-40423145 Msa1326290:CDS 30.0%
!! GACGACATGGATATTTTTAA+GGG - chr8_4:40423148-40423167 Msa1326290:CDS 30.0%
CAAATTATAAATCCTGCAAG+GGG - chr8_4:40423247-40423266 Msa1326290:CDS 30.0%
AAGCTTATTTAATTGCCAAG+AGG - chr8_4:40423302-40423321 Msa1326290:CDS 30.0%
CAATATATTTGTATGGGACT+AGG + chr8_4:40423462-40423481 None:intergenic 30.0%
CAAATATATTGTTTGCAGAC+AGG - chr8_4:40423471-40423490 Msa1326290:CDS 30.0%
ATATGTTAGTACTCATGATG+TGG - chr8_4:40423705-40423724 Msa1326290:intron 30.0%
! ATCATTATACTAAAAGGTGC+TGG - chr8_4:40423776-40423795 Msa1326290:intron 30.0%
!! TCATTATACTAAAAGGTGCT+GGG - chr8_4:40423777-40423796 Msa1326290:intron 30.0%
! AGAGTTATTTCACTTTCTCA+TGG - chr8_4:40423823-40423842 Msa1326290:intron 30.0%
! TTTCACTTTCTCATGGTTTT+AGG - chr8_4:40423830-40423849 Msa1326290:intron 30.0%
CATACAAAAGAACTAGTAGA+AGG - chr8_4:40423881-40423900 Msa1326290:intron 30.0%
AATATCGTGTTCATTGTTAG+TGG - chr8_4:40424012-40424031 Msa1326290:intron 30.0%
!!! CTGAACATGGTTACTTTTTA+AGG - chr8_4:40424094-40424113 Msa1326290:intron 30.0%
TGGATCTAATATTGAAGTCA+AGG - chr8_4:40424304-40424323 Msa1326290:intron 30.0%
AATTTGAAAAACTCTACCTG+TGG + chr8_4:40424473-40424492 None:intergenic 30.0%
! GTCATGAATTTTCTCTTTAC+AGG - chr8_4:40424551-40424570 Msa1326290:intron 30.0%
! AGAAAATATTTTGCCTTGCT+AGG + chr8_4:40424768-40424787 None:intergenic 30.0%
! TCCTGTGAATCAGAAATTTT+TGG - chr8_4:40424943-40424962 Msa1326290:intron 30.0%
! CCTGTGAATCAGAAATTTTT+GGG - chr8_4:40424944-40424963 Msa1326290:intron 30.0%
!!! GACAGTTTTTTTCTTGTACA+TGG - chr8_4:40425085-40425104 Msa1326290:intron 30.0%
!!! TTCGACTTTTGAAGTTCTAT+TGG - chr8_4:40425275-40425294 Msa1326290:intron 30.0%
!!! TCGACTTTTGAAGTTCTATT+GGG - chr8_4:40425276-40425295 Msa1326290:intron 30.0%
! TTCCTAATAAGCTTTTGTCT+AGG - chr8_4:40425311-40425330 Msa1326290:intron 30.0%
! TCCTAATAAGCTTTTGTCTA+GGG - chr8_4:40425312-40425331 Msa1326290:intron 30.0%
! TTCTTAAGTGTAAAGGTGTA+TGG + chr8_4:40425423-40425442 None:intergenic 30.0%
GTTGAAGTTCTTAAGTGTAA+AGG + chr8_4:40425430-40425449 None:intergenic 30.0%
AGGTATGAGTTTGAACTTAC+CGG + chr8_4:40420296-40420315 None:intergenic 35.0%
!!! TTTTGTTGGGGTTGATTTGA+TGG - chr8_4:40420901-40420920 Msa1326290:CDS 35.0%
!! TTTGTTGGGGTTGATTTGAT+GGG - chr8_4:40420902-40420921 Msa1326290:CDS 35.0%
TTTCAGAAGAAAAAGGTGGT+AGG - chr8_4:40420931-40420950 Msa1326290:CDS 35.0%
TTCAGAAGAAAAAGGTGGTA+GGG - chr8_4:40420932-40420951 Msa1326290:CDS 35.0%
!!! TTTTTTCACATCCTTCTTGC+TGG - chr8_4:40421128-40421147 Msa1326290:intron 35.0%
! TTTTTCACATCCTTCTTGCT+GGG - chr8_4:40421129-40421148 Msa1326290:intron 35.0%
GTTTGACAACTGTAATGTGT+TGG - chr8_4:40421169-40421188 Msa1326290:intron 35.0%
! TACCATTTTGCTTGCATACA+TGG - chr8_4:40421308-40421327 Msa1326290:CDS 35.0%
! AGGGACACTTTGTATCATTT+TGG + chr8_4:40421441-40421460 None:intergenic 35.0%
! GCATGATTAAGTGTTGTTAG+TGG - chr8_4:40421523-40421542 Msa1326290:intron 35.0%
!! GTTGTTAGTGGTTCACTTTT+TGG - chr8_4:40421535-40421554 Msa1326290:intron 35.0%
ACTTGGAATCAGCAAAAACA+AGG + chr8_4:40421573-40421592 None:intergenic 35.0%
TGCTGACAACTAGACAAAAT+TGG + chr8_4:40421666-40421685 None:intergenic 35.0%
!!! CTAGCTGGTTTTCATATTGT+AGG + chr8_4:40421906-40421925 None:intergenic 35.0%
TCCCGTGATATATTATTCGT+AGG - chr8_4:40422034-40422053 Msa1326290:CDS 35.0%
! GCTAATCTTTTAGACTTAGC+TGG - chr8_4:40422164-40422183 Msa1326290:CDS 35.0%
! AATCTTTTAGACTTAGCTGG+TGG - chr8_4:40422167-40422186 Msa1326290:CDS 35.0%
TAACATCTGATTCACCATCA+AGG + chr8_4:40422265-40422284 None:intergenic 35.0%
! GAATCAGATGTTAGTTCTTC+TGG - chr8_4:40422272-40422291 Msa1326290:CDS 35.0%
! ATGTTAGTTCTTCTGGATGT+CGG - chr8_4:40422279-40422298 Msa1326290:CDS 35.0%
TGCTAAATGGTGTTTCAGTT+GGG - chr8_4:40422361-40422380 Msa1326290:CDS 35.0%
TGATACTGAGGTAATCTATG+TGG - chr8_4:40422427-40422446 Msa1326290:CDS 35.0%
GATACTGAGGTAATCTATGT+GGG - chr8_4:40422428-40422447 Msa1326290:CDS 35.0%
TGAAATTGCTCAGAGATTAC+TGG - chr8_4:40422487-40422506 Msa1326290:CDS 35.0%
!! CAAGATAGAACTTTTTCTGC+AGG + chr8_4:40422550-40422569 None:intergenic 35.0%
CTGCAGAAAAAGTTCTATCT+TGG - chr8_4:40422548-40422567 Msa1326290:CDS 35.0%
AGCATATGGGTAGCATATAA+TGG + chr8_4:40422604-40422623 None:intergenic 35.0%
! ATCCCGATGATGATTTTGTT+TGG - chr8_4:40422714-40422733 Msa1326290:CDS 35.0%
!! TCCCGATGATGATTTTGTTT+GGG - chr8_4:40422715-40422734 Msa1326290:CDS 35.0%
ACCCAAACAAAATCATCATC+GGG + chr8_4:40422719-40422738 None:intergenic 35.0%
AAGTAGGCAAAATCATCAAG+TGG + chr8_4:40422751-40422770 None:intergenic 35.0%
! TGATTTTGCCTACTTTCTTG+AGG - chr8_4:40422756-40422775 Msa1326290:CDS 35.0%
AATCGTTTCCTCAAGAAAGT+AGG + chr8_4:40422767-40422786 None:intergenic 35.0%
CGATTTCATCGAGTTAAACT+TGG - chr8_4:40422782-40422801 Msa1326290:CDS 35.0%
! TCCCATCATCTGAAATTTAC+CGG - chr8_4:40422825-40422844 Msa1326290:CDS 35.0%
TCCGGTAAATTTCAGATGAT+GGG + chr8_4:40422829-40422848 None:intergenic 35.0%
TTGAGAATTTCATCCCTTAC+TGG + chr8_4:40422857-40422876 None:intergenic 35.0%
GTAAGGGATGAAATTCTCAA+AGG - chr8_4:40422857-40422876 Msa1326290:CDS 35.0%
! TTTAGCTTAGAGGATGTAGA+AGG + chr8_4:40423082-40423101 None:intergenic 35.0%
!!! CTGAATCTCTTTTAGCTTAG+AGG + chr8_4:40423092-40423111 None:intergenic 35.0%
CTCTAAGCTAAAAGAGATTC+AGG - chr8_4:40423090-40423109 Msa1326290:CDS 35.0%
!! GGACGACATGGATATTTTTA+AGG - chr8_4:40423147-40423166 Msa1326290:CDS 35.0%
!! CAATCTGAAATTTCTAGCTG+TGG - chr8_4:40423174-40423193 Msa1326290:CDS 35.0%
AATAAGCACTCTTCTCGAAA+CGG + chr8_4:40423390-40423409 None:intergenic 35.0%
TATGAATTTAGCCCTCAGTA+TGG - chr8_4:40423642-40423661 Msa1326290:intron 35.0%
ATGAATTTAGCCCTCAGTAT+GGG - chr8_4:40423643-40423662 Msa1326290:intron 35.0%
CATATCGATAGTGTTTCTCA+TGG + chr8_4:40423690-40423709 None:intergenic 35.0%
TACTCATGATGTGGCATATT+GGG - chr8_4:40423714-40423733 Msa1326290:intron 35.0%
!! CATTATACTAAAAGGTGCTG+GGG - chr8_4:40423778-40423797 Msa1326290:intron 35.0%
TGCTGATACAATATGGTCAA+TGG + chr8_4:40423863-40423882 None:intergenic 35.0%
GCCATCTTTCTTGATTATGA+TGG - chr8_4:40423904-40423923 Msa1326290:intron 35.0%
GCCATCATAATCAAGAAAGA+TGG + chr8_4:40423908-40423927 None:intergenic 35.0%
TAAGCACAGATATGACTTCA+GGG + chr8_4:40423969-40423988 None:intergenic 35.0%
TTAAGCACAGATATGACTTC+AGG + chr8_4:40423970-40423989 None:intergenic 35.0%
CAAGAGATTCTCTGAATGAA+TGG - chr8_4:40424040-40424059 Msa1326290:intron 35.0%
TTTACATCATGCAAACTGCT+GGG - chr8_4:40424063-40424082 Msa1326290:intron 35.0%
GGAAACAAGTCATTTGTTTG+CGG - chr8_4:40424223-40424242 Msa1326290:intron 35.0%
ATTTGTTTGCGGATCTTGAT+TGG - chr8_4:40424234-40424253 Msa1326290:intron 35.0%
GAACCAGCAATTGTTAAAAG+AGG - chr8_4:40424425-40424444 Msa1326290:intron 35.0%
GCTTAACTTCAACAATATGC+TGG + chr8_4:40424451-40424470 None:intergenic 35.0%
TATTGTTGAAGTTAAGCCAC+AGG - chr8_4:40424454-40424473 Msa1326290:intron 35.0%
! CTTACTAGTTTCACTGTTAG+AGG + chr8_4:40424511-40424530 None:intergenic 35.0%
TGAGAAGGTTCTCTTGAATA+TGG - chr8_4:40424596-40424615 Msa1326290:intron 35.0%
CTCTTGAATATGGTTAATGC+CGG - chr8_4:40424606-40424625 Msa1326290:intron 35.0%
GATGTTGTAAAGTTGCTTGA+TGG - chr8_4:40424801-40424820 Msa1326290:intron 35.0%
!!! TTTGGGCTTTTGATTTGTTG+AGG + chr8_4:40424835-40424854 None:intergenic 35.0%
CTCAAAAGAAACCTGGAATT+GGG + chr8_4:40424865-40424884 None:intergenic 35.0%
TCTCAAAAGAAACCTGGAAT+TGG + chr8_4:40424866-40424885 None:intergenic 35.0%
!! TTTTGAGAGCACAGTTTCTT+AGG - chr8_4:40424878-40424897 Msa1326290:intron 35.0%
CCCAAAAATTTCTGATTCAC+AGG + chr8_4:40424947-40424966 None:intergenic 35.0%
ACAAAATCGCACTATTTGTC+AGG + chr8_4:40424983-40425002 None:intergenic 35.0%
! GACAAATAGTGCGATTTTGT+TGG - chr8_4:40424983-40425002 Msa1326290:intron 35.0%
!!! CGACTTTTGAAGTTCTATTG+GGG - chr8_4:40425277-40425296 Msa1326290:intron 35.0%
ACCCTAGACAAAAGCTTATT+AGG + chr8_4:40425316-40425335 None:intergenic 35.0%
CAGTATAATTCCCAGCAAGA+AGG + chr8_4:40421142-40421161 None:intergenic 40.0%
GACCATGTATGCAAGCAAAA+TGG + chr8_4:40421313-40421332 None:intergenic 40.0%
!! AATACTAACTCTAAGACGCG+TGG + chr8_4:40421738-40421757 None:intergenic 40.0%
TGATATGAAGAAGTGACGAC+AGG + chr8_4:40421770-40421789 None:intergenic 40.0%
TTTCATCTATCATCACGTCC+TGG - chr8_4:40421796-40421815 Msa1326290:CDS 40.0%
TTTCAGGGATATTCACTAGC+TGG + chr8_4:40421921-40421940 None:intergenic 40.0%
GGTATGAGCAAATACATGCA+TGG + chr8_4:40421979-40421998 None:intergenic 40.0%
TAACCCTTGGAAGACTTCTT+GGG + chr8_4:40422217-40422236 None:intergenic 40.0%
ATAACCCTTGGAAGACTTCT+TGG + chr8_4:40422218-40422237 None:intergenic 40.0%
TCAAGGTCAGAAATAATCCC+AGG + chr8_4:40422248-40422267 None:intergenic 40.0%
!! GGGATTATTTCTGACCTTGA+TGG - chr8_4:40422248-40422267 Msa1326290:CDS 40.0%
! TGTTAGTTCTTCTGGATGTC+GGG - chr8_4:40422280-40422299 Msa1326290:CDS 40.0%
! ATATCTCTTTTAGCCTGCAG+CGG + chr8_4:40422335-40422354 None:intergenic 40.0%
CTGCTAAATGGTGTTTCAGT+TGG - chr8_4:40422360-40422379 Msa1326290:CDS 40.0%
ACTGGATGACTTTAATTGCG+TGG - chr8_4:40422505-40422524 Msa1326290:CDS 40.0%
!! AACTTTTTCTGCAGGTCATG+GGG + chr8_4:40422542-40422561 None:intergenic 40.0%
!! GAACTTTTTCTGCAGGTCAT+GGG + chr8_4:40422543-40422562 None:intergenic 40.0%
!! AGAACTTTTTCTGCAGGTCA+TGG + chr8_4:40422544-40422563 None:intergenic 40.0%
! GGTAGCATATAATGGAAGAG+AGG + chr8_4:40422596-40422615 None:intergenic 40.0%
TCACCATGATCTGAGCATAT+GGG + chr8_4:40422617-40422636 None:intergenic 40.0%
ATCACCATGATCTGAGCATA+TGG + chr8_4:40422618-40422637 None:intergenic 40.0%
! ATGATGGGAAAGGACTATGA+AGG + chr8_4:40422814-40422833 None:intergenic 40.0%
GTCCGGTAAATTTCAGATGA+TGG + chr8_4:40422830-40422849 None:intergenic 40.0%
CAACTTCACCCTGCAAATTT+GGG + chr8_4:40423219-40423238 None:intergenic 40.0%
ACAACTTCACCCTGCAAATT+TGG + chr8_4:40423220-40423239 None:intergenic 40.0%
ATAAGCACTCTTCTCGAAAC+GGG + chr8_4:40423389-40423408 None:intergenic 40.0%
TTGCATCGTCAATGCTGTAA+GGG - chr8_4:40423426-40423445 Msa1326290:CDS 40.0%
! CTTGTTGTGTCTGAGTTCAT+TGG - chr8_4:40423553-40423572 Msa1326290:intron 40.0%
TGAATTTAGCCCTCAGTATG+GGG - chr8_4:40423644-40423663 Msa1326290:intron 40.0%
GTACTCATGATGTGGCATAT+TGG - chr8_4:40423713-40423732 Msa1326290:intron 40.0%
!! ACGCAGTTTTATGCAGGATT+TGG - chr8_4:40423738-40423757 Msa1326290:intron 40.0%
TCGTGTTCATTGTTAGTGGA+AGG - chr8_4:40424016-40424035 Msa1326290:intron 40.0%
CGTGTTCATTGTTAGTGGAA+GGG - chr8_4:40424017-40424036 Msa1326290:intron 40.0%
GTTTACATCATGCAAACTGC+TGG - chr8_4:40424062-40424081 Msa1326290:intron 40.0%
TCGTATACAGAAGCAACTGA+TGG - chr8_4:40424284-40424303 Msa1326290:intron 40.0%
!! TGAAGTCAAGGAAAGTGCTT+TGG - chr8_4:40424316-40424335 Msa1326290:intron 40.0%
TAGCAAGAACACTTTCCAAG+TGG + chr8_4:40424403-40424422 None:intergenic 40.0%
! TGGCCTCTTTTAACAATTGC+TGG + chr8_4:40424431-40424450 None:intergenic 40.0%
TCTTTACAGGGAGTAACCAA+AGG - chr8_4:40424564-40424583 Msa1326290:intron 40.0%
TGATGTGCATTGGAGATGAT+AGG - chr8_4:40424646-40424665 Msa1326290:intron 40.0%
TACCGTGCAAGCAAAAATCT+CGG + chr8_4:40424736-40424755 None:intergenic 40.0%
!! TTTGATTTGTTGAGGTAGCG+AGG + chr8_4:40424827-40424846 None:intergenic 40.0%
TGGAATTGGGCAAGATGTTT+GGG + chr8_4:40424852-40424871 None:intergenic 40.0%
AACGAACCAACAATGCTGTT+TGG + chr8_4:40424908-40424927 None:intergenic 40.0%
!! ATTGTTGGTTCGTTATGCGA+GGG - chr8_4:40424914-40424933 Msa1326290:intron 40.0%
! ATAGTGCGATTTTGTTGGTG+TGG - chr8_4:40424988-40425007 Msa1326290:intron 40.0%
GTGTGGATCAGATTCTTTCT+GGG - chr8_4:40425005-40425024 Msa1326290:intron 40.0%
AGTACAAGCAACGATCAATC+AGG + chr8_4:40425174-40425193 None:intergenic 40.0%
!! GTGCAGCAAGATCTACTTTT+TGG + chr8_4:40425343-40425362 None:intergenic 40.0%
GAGAGAGAGAGAGAGAAGAA+TGG + chr8_4:40420196-40420215 None:intergenic 45.0%
GAAAAGTGGTGAGTGAAGAG+AGG + chr8_4:40420316-40420335 None:intergenic 45.0%
ACTGTCGAACAAATAGCACC+AGG + chr8_4:40421817-40421836 None:intergenic 45.0%
AACCCTTGGAAGACTTCTTG+GGG + chr8_4:40422216-40422235 None:intergenic 45.0%
CAAGGGTTATGACTGTTCCT+GGG - chr8_4:40422228-40422247 Msa1326290:CDS 45.0%
ATGGTGTTTCAGTTGGGATG+AGG - chr8_4:40422367-40422386 Msa1326290:CDS 45.0%
! CGGGTTTTCTTCTGATACTG+AGG - chr8_4:40422415-40422434 Msa1326290:CDS 45.0%
AATCTATGTGGGTTCGCTCA+AGG - chr8_4:40422439-40422458 Msa1326290:CDS 45.0%
TGAGATAGATGCTAGTGAGC+AGG - chr8_4:40422463-40422482 Msa1326290:CDS 45.0%
! GTTTTTGTAAGCAGCAGCTC+TGG - chr8_4:40422570-40422589 Msa1326290:CDS 45.0%
CTACCCATATGCTCAGATCA+TGG - chr8_4:40422611-40422630 Msa1326290:CDS 45.0%
TTTACCGGACTTTGCCAGTA+AGG - chr8_4:40422840-40422859 Msa1326290:CDS 45.0%
TTACCGGACTTTGCCAGTAA+GGG - chr8_4:40422841-40422860 Msa1326290:CDS 45.0%
TCTTGCTGCAGTAGAATGCT+AGG - chr8_4:40422938-40422957 Msa1326290:CDS 45.0%
CTGGACTATGAATCTAAGCG+CGG - chr8_4:40422962-40422981 Msa1326290:CDS 45.0%
GAATCTAAGCGCGGACATAT+AGG - chr8_4:40422971-40422990 Msa1326290:CDS 45.0%
TTTGCCGGTAGGAATTCACA+TGG - chr8_4:40423030-40423049 Msa1326290:CDS 45.0%
TTGCCGGTAGGAATTCACAT+GGG - chr8_4:40423031-40423050 Msa1326290:CDS 45.0%
CTACCCATGTGAATTCCTAC+CGG + chr8_4:40423037-40423056 None:intergenic 45.0%
! TATTCTTGGTGTGGACGACA+TGG - chr8_4:40423135-40423154 Msa1326290:CDS 45.0%
CAGCAGAACCCAAATTTGCA+GGG - chr8_4:40423208-40423227 Msa1326290:CDS 45.0%
ATAAATCCTGCAAGGGGTTC+AGG - chr8_4:40423253-40423272 Msa1326290:CDS 45.0%
TAAATCCTGCAAGGGGTTCA+GGG - chr8_4:40423254-40423273 Msa1326290:CDS 45.0%
! GAGCGGTCAATGATAATGAC+TGG + chr8_4:40423361-40423380 None:intergenic 45.0%
TAAGCACTCTTCTCGAAACG+GGG + chr8_4:40423388-40423407 None:intergenic 45.0%
GTTGCATCGTCAATGCTGTA+AGG - chr8_4:40423425-40423444 Msa1326290:CDS 45.0%
ATCGTCAATGCTGTAAGGGA+TGG - chr8_4:40423430-40423449 Msa1326290:CDS 45.0%
TCGTCAATGCTGTAAGGGAT+GGG - chr8_4:40423431-40423450 Msa1326290:CDS 45.0%
ACAACAAGCATGCTTGTACG+AGG + chr8_4:40423541-40423560 None:intergenic 45.0%
GTTGTTCACCTTCTCTGAGT+GGG - chr8_4:40423575-40423594 Msa1326290:intron 45.0%
TTGTTCACCTTCTCTGAGTG+GGG - chr8_4:40423576-40423595 Msa1326290:intron 45.0%
GCAACTGCATCTATATCCCA+GGG + chr8_4:40423616-40423635 None:intergenic 45.0%
AGCAACTGCATCTATATCCC+AGG + chr8_4:40423617-40423636 None:intergenic 45.0%
!! ACTAAAAGGTGCTGGGGAAT+TGG - chr8_4:40423784-40423803 Msa1326290:intron 45.0%
ACAGATATGACTTCAGGGCT+GGG + chr8_4:40423964-40423983 None:intergenic 45.0%
GACTGAGGAGGAAGAAACAA+AGG + chr8_4:40424127-40424146 None:intergenic 45.0%
GTGGAATAGCGACTCTGAAT+GGG - chr8_4:40424202-40424221 Msa1326290:intron 45.0%
TGCGGATCTTGATTGGAAAC+AGG - chr8_4:40424241-40424260 Msa1326290:intron 45.0%
GGATCTTGATTGGAAACAGG+TGG - chr8_4:40424244-40424263 Msa1326290:intron 45.0%
TCTGTATACGACTGCATGAC+AGG + chr8_4:40424275-40424294 None:intergenic 45.0%
!! TCAAGGAAAGTGCTTTGGTG+TGG - chr8_4:40424321-40424340 Msa1326290:intron 45.0%
! CAAGATGCAGACCCTGATTT+TGG - chr8_4:40424350-40424369 Msa1326290:intron 45.0%
CAAGTGGTCCAGCAATTCTT+TGG + chr8_4:40424387-40424406 None:intergenic 45.0%
CAAAGAATTGCTGGACCACT+TGG - chr8_4:40424385-40424404 Msa1326290:intron 45.0%
ACAGGGAGTAACCAAAGGTT+TGG - chr8_4:40424569-40424588 Msa1326290:intron 45.0%
CTTCTCAGCTACCAAACCTT+TGG + chr8_4:40424583-40424602 None:intergenic 45.0%
! CAAAGGTTTGGTAGCTGAGA+AGG - chr8_4:40424581-40424600 Msa1326290:intron 45.0%
!! CACGAAATCTGGTGGATTAC+CGG + chr8_4:40424628-40424647 None:intergenic 45.0%
ATGCACATCACGAAATCTGG+TGG + chr8_4:40424636-40424655 None:intergenic 45.0%
CCAATGCACATCACGAAATC+TGG + chr8_4:40424639-40424658 None:intergenic 45.0%
CCAGATTTCGTGATGTGCAT+TGG - chr8_4:40424636-40424655 Msa1326290:intron 45.0%
! TCCCGAGATTTTTGCTTGCA+CGG - chr8_4:40424731-40424750 Msa1326290:intron 45.0%
ACCGTGCAAGCAAAAATCTC+GGG + chr8_4:40424735-40424754 None:intergenic 45.0%
! GAGATTTTTGCTTGCACGGT+AGG - chr8_4:40424735-40424754 Msa1326290:intron 45.0%
! TTTTTGCTTGCACGGTAGGT+AGG - chr8_4:40424739-40424758 Msa1326290:intron 45.0%
CTGGAATTGGGCAAGATGTT+TGG + chr8_4:40424853-40424872 None:intergenic 45.0%
CAAACATCTTGCCCAATTCC+AGG - chr8_4:40424851-40424870 Msa1326290:intron 45.0%
CTGTGCTCTCAAAAGAAACC+TGG + chr8_4:40424872-40424891 None:intergenic 45.0%
!! CATTGTTGGTTCGTTATGCG+AGG - chr8_4:40424913-40424932 Msa1326290:intron 45.0%
GGTGTGGATCAGATTCTTTC+TGG - chr8_4:40425004-40425023 Msa1326290:intron 45.0%
TTCTTTCTGGGCTCCTGAAT+CGG - chr8_4:40425017-40425036 Msa1326290:intron 45.0%
ACTGGTGCTTCATTGAGCAT+CGG - chr8_4:40425128-40425147 Msa1326290:intron 45.0%
!! ATATAGTAAATAAAATTATT+GGG + chr8_4:40420688-40420707 None:intergenic 5.0%
!! AATATAGTAAATAAAATTAT+TGG + chr8_4:40420689-40420708 None:intergenic 5.0%
GAGTTTGAACTTACCGGCGA+CGG + chr8_4:40420290-40420309 None:intergenic 50.0%
GAAGTGACGACAGGTCAACT+AGG + chr8_4:40421761-40421780 None:intergenic 50.0%
ACACCCCAAGAAGTCTTCCA+AGG - chr8_4:40422210-40422229 Msa1326290:CDS 50.0%
CACCCCAAGAAGTCTTCCAA+GGG - chr8_4:40422211-40422230 Msa1326290:CDS 50.0%
CCAGGAACAGTCATAACCCT+TGG + chr8_4:40422230-40422249 None:intergenic 50.0%
CCAAGGGTTATGACTGTTCC+TGG - chr8_4:40422227-40422246 Msa1326290:CDS 50.0%
TCGGGAGCGGAAAATCATTG+TGG - chr8_4:40422298-40422317 Msa1326290:CDS 50.0%
ATCGCTTTGACCGAGTGCTT+TGG - chr8_4:40422636-40422655 Msa1326290:CDS 50.0%
! CATAAGCCTGCCAAAGCACT+CGG + chr8_4:40422649-40422668 None:intergenic 50.0%
CATCCCTTACTGGCAAAGTC+CGG + chr8_4:40422847-40422866 None:intergenic 50.0%
CTGCAGTAGAATGCTAGGTC+TGG - chr8_4:40422943-40422962 Msa1326290:CDS 50.0%
CGGTAGGAATTCACATGGGT+AGG - chr8_4:40423035-40423054 Msa1326290:CDS 50.0%
GCAGCAGAACCCAAATTTGC+AGG - chr8_4:40423207-40423226 Msa1326290:CDS 50.0%
TGCAAAGCTGGATGAAGCTG+TGG - chr8_4:40423498-40423517 Msa1326290:exon 50.0%
GCAAAGCTGGATGAAGCTGT+GGG - chr8_4:40423499-40423518 Msa1326290:exon 50.0%
GGTTGTTCACCTTCTCTGAG+TGG - chr8_4:40423574-40423593 Msa1326290:intron 50.0%
!! TTGGGCACGCAGTTTTATGC+AGG - chr8_4:40423732-40423751 Msa1326290:intron 50.0%
AGATATGACTTCAGGGCTGG+GGG + chr8_4:40423962-40423981 None:intergenic 50.0%
CAGATATGACTTCAGGGCTG+GGG + chr8_4:40423963-40423982 None:intergenic 50.0%
CACAGATATGACTTCAGGGC+TGG + chr8_4:40423965-40423984 None:intergenic 50.0%
! TTCTTTTGGTGGGGTGACTG+AGG + chr8_4:40424142-40424161 None:intergenic 50.0%
GGTGGAATAGCGACTCTGAA+TGG - chr8_4:40424201-40424220 Msa1326290:intron 50.0%
CTTGGCAGGAGCCAAAATCA+GGG + chr8_4:40424364-40424383 None:intergenic 50.0%
!! CAGCAATTCTTTGGCTTGGC+AGG + chr8_4:40424378-40424397 None:intergenic 50.0%
CTGCCAAGCCAAAGAATTGC+TGG - chr8_4:40424376-40424395 Msa1326290:intron 50.0%
GGTCCAGCAATTCTTTGGCT+TGG + chr8_4:40424382-40424401 None:intergenic 50.0%
GCAAAAATCTCGGGAGCTGA+TGG + chr8_4:40424726-40424745 None:intergenic 50.0%
! GAGAGCACAGTTTCTTAGGC+AGG - chr8_4:40424882-40424901 Msa1326290:intron 50.0%
! GATGCCATGCAAACCGATTC+AGG + chr8_4:40425033-40425052 None:intergenic 50.0%
!! GAATCGGTTTGCATGGCATC+AGG - chr8_4:40425033-40425052 Msa1326290:intron 50.0%
CACTACGCGTTTCACCTCAC+CGG - chr8_4:40420245-40420264 Msa1326290:three_prime_UTR 55.0%
GAACTTACCGGCGACGGTAA+CGG + chr8_4:40420284-40420303 None:intergenic 55.0%
GGAAGACTTCTTGGGGTGTG+AGG + chr8_4:40422209-40422228 None:intergenic 55.0%
GTTCTTCTGGATGTCGGGAG+CGG - chr8_4:40422285-40422304 Msa1326290:CDS 55.0%
CAGGTCATGGGGTAGAAAGG+TGG + chr8_4:40422531-40422550 None:intergenic 55.0%
CTGCAGGTCATGGGGTAGAA+AGG + chr8_4:40422534-40422553 None:intergenic 55.0%
CTTTGACCGAGTGCTTTGGC+AGG - chr8_4:40422640-40422659 Msa1326290:CDS 55.0%
GGGTTCAGGGAAGGATGTTC+AGG - chr8_4:40423267-40423286 Msa1326290:CDS 55.0%
TCTCGAAACGGGGAACAGAG+CGG + chr8_4:40423378-40423397 None:intergenic 55.0%
CAGACAGGGAACTGCAAAGC+TGG - chr8_4:40423486-40423505 Msa1326290:CDS 55.0%
TTCTCTGAGTGGGGCCATCA+GGG - chr8_4:40423585-40423604 Msa1326290:intron 55.0%
ATCCCAGGGATTGACCCTGA+TGG + chr8_4:40423602-40423621 None:intergenic 55.0%
!! AAGGTGCTGGGGAATTGGTC+TGG - chr8_4:40423789-40423808 Msa1326290:intron 55.0%
!! AGGTGCTGGGGAATTGGTCT+GGG - chr8_4:40423790-40423809 Msa1326290:intron 55.0%
! TGGGGAATTGGTCTGGGCTT+GGG - chr8_4:40423796-40423815 Msa1326290:intron 55.0%
CTGGGACTTGCAGCTGAACA+TGG - chr8_4:40424081-40424100 Msa1326290:intron 55.0%
! TTTTGGTGGGGTGACTGAGG+AGG + chr8_4:40424139-40424158 None:intergenic 55.0%
GCTTGGCAGGAGCCAAAATC+AGG + chr8_4:40424365-40424384 None:intergenic 55.0%
! TCGGGAGCTGATGGTAACGA+CGG + chr8_4:40424717-40424736 None:intergenic 55.0%
GGTAGGTAGGAAGCCTAGCA+AGG - chr8_4:40424752-40424771 Msa1326290:intron 55.0%
GGCAGGCCAAACAGCATTGT+TGG - chr8_4:40424899-40424918 Msa1326290:intron 55.0%
!! GGCTCCTGAATCGGTTTGCA+TGG - chr8_4:40425026-40425045 Msa1326290:intron 55.0%
CGGTTTGCATGGCATCAGGA+AGG - chr8_4:40425037-40425056 Msa1326290:intron 55.0%
GCATCAGGAAGGTTGACGTG+TGG - chr8_4:40425048-40425067 Msa1326290:intron 55.0%
GAAGGTTGACGTGTGGTTCG+AGG - chr8_4:40425055-40425074 Msa1326290:intron 55.0%
TAACGGCGACGGCGAGATTC+CGG + chr8_4:40420267-40420286 None:intergenic 60.0%
GGCAAACATGTTGCCGCTGC+AGG - chr8_4:40422319-40422338 Msa1326290:CDS 60.0%
TCCTGCAAGGGGTTCAGGGA+AGG - chr8_4:40423258-40423277 Msa1326290:CDS 60.0%
TCCTTCCCTGAACCCCTTGC+AGG + chr8_4:40423262-40423281 None:intergenic 60.0%
CTGATGGCCCCACTCAGAGA+AGG + chr8_4:40423586-40423605 None:intergenic 60.0%
CTTCTCTGAGTGGGGCCATC+AGG - chr8_4:40423584-40423603 Msa1326290:intron 60.0%
GGCCATCAGGGTCAATCCCT+GGG - chr8_4:40423597-40423616 Msa1326290:intron 60.0%
! CTGGGGAATTGGTCTGGGCT+TGG - chr8_4:40423795-40423814 Msa1326290:intron 60.0%
! GGGGAATTGGTCTGGGCTTG+GGG - chr8_4:40423797-40423816 Msa1326290:intron 60.0%
! CGGGAGCTGATGGTAACGAC+GGG + chr8_4:40424716-40424735 None:intergenic 60.0%
GGGCCATCAGGGTCAATCCC+TGG - chr8_4:40423596-40423615 Msa1326290:intron 65.0%
GCGACGGCGAGATTCCGGTG+AGG + chr8_4:40420262-40420281 None:intergenic 70.0%
! ACCGGCGACGGTAACGGCGA+CGG + chr8_4:40420278-40420297 None:intergenic 70.0%
GCCGTCGCCGTTACCGTCGC+CGG - chr8_4:40420274-40420293 Msa1326290:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 40420168 40425483 40420168 ID=Msa1326290;Name=Msa1326290
chr8_4 mRNA 40420168 40425483 40420168 ID=Msa1326290-mRNA-1;Parent=Msa1326290;Name=Msa1326290-mRNA-1;_AED=0.01;_eAED=0.01;_QI=163|1|1|1|0.66|0.5|4|584|856
chr8_4 exon 40420168 40421078 40420168 ID=Msa1326290-mRNA-1:exon:12000;Parent=Msa1326290-mRNA-1
chr8_4 exon 40421176 40421449 40421176 ID=Msa1326290-mRNA-1:exon:11999;Parent=Msa1326290-mRNA-1
chr8_4 exon 40421536 40423540 40421536 ID=Msa1326290-mRNA-1:exon:11998;Parent=Msa1326290-mRNA-1
chr8_4 exon 40425356 40425483 40425356 ID=Msa1326290-mRNA-1:exon:11997;Parent=Msa1326290-mRNA-1
chr8_4 five_prime_UTR 40425356 40425483 40425356 ID=Msa1326290-mRNA-1:five_prime_utr;Parent=Msa1326290-mRNA-1
chr8_4 five_prime_UTR 40423506 40423540 40423506 ID=Msa1326290-mRNA-1:five_prime_utr;Parent=Msa1326290-mRNA-1
chr8_4 CDS 40421536 40423505 40421536 ID=Msa1326290-mRNA-1:cds;Parent=Msa1326290-mRNA-1
chr8_4 CDS 40421176 40421449 40421176 ID=Msa1326290-mRNA-1:cds;Parent=Msa1326290-mRNA-1
chr8_4 CDS 40420752 40421078 40420752 ID=Msa1326290-mRNA-1:cds;Parent=Msa1326290-mRNA-1
chr8_4 three_prime_UTR 40420168 40420751 40420168 ID=Msa1326290-mRNA-1:three_prime_utr;Parent=Msa1326290-mRNA-1
Gene Sequence

>Msa1326290

ATGACATCAAGATCGTATGCTAATCTTTTAGACTTAGCTGGTGGAGACTTGCTTGATATTCCTCACACCCCAAGAAGTCTTCCAAGGGTTATGACTGTTCCTGGGATTATTTCTGACCTTGATGGTGAATCAGATGTTAGTTCTTCTGGATGTCGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCGCTGCAGGCTAAAAGAGATATTGATACTGCTAAATGGTGTTTCAGTTGGGATGAGGATTCAATTCTATTACAATTAAAAGACGGGTTTTCTTCTGATACTGAGGTAATCTATGTGGGTTCGCTCAAGGTTGAGATAGATGCTAGTGAGCAGGATGAAATTGCTCAGAGATTACTGGATGACTTTAATTGCGTGGCCACCTTTCTACCCCATGACCTGCAGAAAAAGTTCTATCTTGGTTTTTGTAAGCAGCAGCTCTGGCCTCTCTTCCATTATATGCTACCCATATGCTCAGATCATGGTGATCGCTTTGACCGAGTGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAAGTCATGGAAGTGATTGATCCCGATGATGATTTTGTTTGGGTTCATGACTACCACTTGATGATTTTGCCTACTTTCTTGAGGAAACGATTTCATCGAGTTAAACTTGGGTTTTTCCTTCATAGTCCTTTCCCATCATCTGAAATTTACCGGACTTTGCCAGTAAGGGATGAAATTCTCAAAGGATTGTTGAATTCGGATTTAATTGGTTTTCATACATTCGATTACGCACGTCACTTTCTTTCTTGCTGCAGTAGAATGCTAGGTCTGGACTATGAATCTAAGCGCGGACATATAGGACTTGATTACTTTGGCCGCACTATATTTATCAAAATTTTGCCGGTAGGAATTCACATGGGTAGGCTTGACTCTGTATTAAATCTTCCTTCTACATCCTCTAAGCTAAAAGAGATTCAGGAAGAGTTTAAAGATAAGAAAGTTATTCTTGGTGTGGACGACATGGATATTTTTAAGGGTATCAATCTGAAATTTCTAGCTGTGGAACAGCTGCTGCAGCAGAACCCAAATTTGCAGGGTGAAGTTGTCCTTGTTCAAATTATAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAAAGAAGCTTATTTAATTGCCAAGAGGATCAATGAAATTTATGGTTCAAAACATTATCAGCCAGTCATTATCATTGACCGCTCTGTTCCCCGTTTCGAGAAGAGTGCTTATTATGCTCTAGCTGAATGTTGCATCGTCAATGCTGTAAGGGATGGGATGAACCTAGTCCCATACAAATATATTGTTTGCAGACAGGGAACTGCAAAGCTGGATGAAGCTGTGGGTAGACAAAGTGATTCTCCTCGTACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCACCTTCTCTGAGTGGGGCCATCAGGGTCAATCCCTGGGATATAGATGCAGTTGCTGATGCTATGAATTTAGCCCTCAGTATGGGGGTTTCTGAGAAGAAGTTGCGCCATGAGAAACACTATCGATATGTTAGTACTCATGATGTGGCATATTGGGCACGCAGTTTTATGCAGGATTTGGAGAGAGCCTGCAAAGATCATTATACTAAAAGGTGCTGGGGAATTGGTCTGGGCTTGGGGTTCAGAGTTATTTCACTTTCTCATGGTTTTAGGAAGCTGTCCATTGACCATATTGTATCAGCATACAAAAGAACTAGTAGAAGGGCCATCTTTCTTGATTATGATGGCACTCTTGTACCACAATCTTATATTAATAAAACCCCCAGCCCTGAAGTCATATCTGTGCTTAATTCTCTGTGTAATGATACCAAAAATATCGTGTTCATTGTTAGTGGAAGGGCAAGAGATTCTCTGAATGAATGGTTTACATCATGCAAACTGCTGGGACTTGCAGCTGAACATGGTTACTTTTTAAGGTGGAATAGCGACTCTGAATGGGAAACAAGTCATTTGTTTGCGGATCTTGATTGGAAACAGGTGGTGCTGCCTGTCATGCAGTCGTATACAGAAGCAACTGATGGATCTAATATTGAAGTCAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGCTCCTGCCAAGCCAAAGAATTGCTGGACCACTTGGAAAGTGTTCTTGCTAATGAACCAGCAATTGTTAAAAGAGGCCAGCATATTGTTGAAGTTAAGCCACAGGGAGTAACCAAAGGTTTGGTAGCTGAGAAGGTTCTCTTGAATATGGTTAATGCCGGTAATCCACCAGATTTCGTGATGTGCATTGGAGATGATAGGTCTGATGAAGACATGTTTGAAAGCATTTTGAGTACAGTCTCGTGCCCGTCGTTACCATCAGCTCCCGAGATTTTTGCTTGCACGGTAGGTAGGAAGCCTAGCAAGGCAAAATATTTTCTTGATGACACTGCTGATGTTGTAAAGTTGCTTGATGGCCTCGCTACCTCAACAAATCAAAAGCCCAAACATCTTGCCCAATTCCAGGTTTCTTTTGAGAGCACAGTTTCTTAG
Protein sequence

>Msa1326290

MTSRSYANLLDLAGGDLLDIPHTPRSLPRVMTVPGIISDLDGESDVSSSGCRERKIIVANMLPLQAKRDIDTAKWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKVEIDASEQDEIAQRLLDDFNCVATFLPHDLQKKFYLGFCKQQLWPLFHYMLPICSDHGDRFDRVLWQAYVSANKIFADKVMEVIDPDDDFVWVHDYHLMILPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLDSVLNLPSTSSKLKEIQEEFKDKKVILGVDDMDIFKGINLKFLAVEQLLQQNPNLQGEVVLVQIINPARGSGKDVQEAKKEAYLIAKRINEIYGSKHYQPVIIIDRSVPRFEKSAYYALAECCIVNAVRDGMNLVPYKYIVCRQGTAKLDEAVGRQSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMNLALSMGVSEKKLRHEKHYRYVSTHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVISLSHGFRKLSIDHIVSAYKRTSRRAIFLDYDGTLVPQSYINKTPSPEVISVLNSLCNDTKNIVFIVSGRARDSLNEWFTSCKLLGLAAEHGYFLRWNSDSEWETSHLFADLDWKQVVLPVMQSYTEATDGSNIEVKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAIVKRGQHIVEVKPQGVTKGLVAEKVLLNMVNAGNPPDFVMCIGDDRSDEDMFESILSTVSCPSLPSAPEIFACTVGRKPSKAKYFLDDTADVVKLLDGLATSTNQKPKHLAQFQVSFESTVS*