Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290780 | XP_024629627.1 | 99.299 | 856 | 6 | 0 | 1 | 856 | 1 | 856 | 0.0 | 1764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290780 | sp|Q9LRA7|TPS9_ARATH | 74.510 | 867 | 209 | 3 | 1 | 855 | 1 | 867 | 0.0 | 1369 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290780 | A0A072U2F7 | 99.299 | 856 | 6 | 0 | 1 | 856 | 1 | 856 | 0.0 | 1764 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0039610 | Msa1290780 | 0.805597 | 1.236495e-49 | -8.615850e-47 |
| Msa0076640 | Msa1290780 | 0.827666 | 1.378886e-54 | -8.615850e-47 |
| Msa0087250 | Msa1290780 | 0.826330 | 2.878791e-54 | -8.615850e-47 |
| Msa0091470 | Msa1290780 | -0.800022 | 1.751203e-48 | -8.615850e-47 |
| Msa0683200 | Msa1290780 | -0.801670 | 8.071708e-49 | -8.615850e-47 |
| Msa0135330 | Msa1290780 | 0.827750 | 1.316350e-54 | -8.615850e-47 |
| Msa0179830 | Msa1290780 | 0.802751 | 4.834294e-49 | -8.615850e-47 |
| Msa0184750 | Msa1290780 | 0.819574 | 1.081555e-52 | -8.615850e-47 |
| Msa1249370 | Msa1290780 | 0.869800 | 2.360085e-66 | -8.615850e-47 |
| Msa1260240 | Msa1290780 | -0.814856 | 1.244891e-51 | -8.615850e-47 |
| Msa1260310 | Msa1290780 | -0.810945 | 8.953181e-51 | -8.615850e-47 |
| Msa1290780 | Msa1299920 | -0.806187 | 9.290240e-50 | -8.615850e-47 |
| Msa1290780 | Msa1309050 | 0.806358 | 8.549519e-50 | -8.615850e-47 |
| Msa1290780 | Msa1326290 | 0.957564 | 2.001719e-115 | -8.615850e-47 |
| Msa1290780 | Msa1342280 | 0.825285 | 5.096112e-54 | -8.615850e-47 |
| Msa1290780 | Msa1443220 | 0.823209 | 1.566867e-53 | -8.615850e-47 |
| Msa1290780 | Msa1453600 | 0.836875 | 7.240347e-57 | -8.615850e-47 |
| Msa1290780 | Msa1460530 | -0.804216 | 2.402688e-49 | -8.615850e-47 |
| Msa0368620 | Msa1290780 | 0.802938 | 4.424166e-49 | -8.615850e-47 |
| Msa0389710 | Msa1290780 | 0.803004 | 4.286599e-49 | -8.615850e-47 |
| Msa0415200 | Msa1290780 | -0.811524 | 6.706642e-51 | -8.615850e-47 |
| Msa0421690 | Msa1290780 | 0.805478 | 1.309418e-49 | -8.615850e-47 |
| Msa0468050 | Msa1290780 | 0.803051 | 4.191836e-49 | -8.615850e-47 |
| Msa0480260 | Msa1290780 | 0.804207 | 2.413575e-49 | -8.615850e-47 |
| Msa0481770 | Msa1290780 | 0.839186 | 1.841769e-57 | -8.615850e-47 |
| Msa1042130 | Msa1290780 | 0.828031 | 1.126725e-54 | -8.615850e-47 |
| Msa1124880 | Msa1290780 | 0.819906 | 9.078397e-53 | -8.615850e-47 |
| Msa1194110 | Msa1290780 | 0.943541 | 9.990186e-103 | -8.615850e-47 |
| Msa1213180 | Msa1290780 | -0.805463 | 1.318852e-49 | -8.615850e-47 |
| Msa0577640 | Msa1290780 | 0.838635 | 2.558156e-57 | -8.615850e-47 |
| Msa0577730 | Msa1290780 | 0.839512 | 1.515526e-57 | -8.615850e-47 |
| Msa0909720 | Msa1290780 | -0.809725 | 1.641534e-50 | -8.615850e-47 |
| Msa0947520 | Msa1290780 | 0.802552 | 5.313572e-49 | -8.615850e-47 |
| Msa0968960 | Msa1290780 | -0.804299 | 2.309552e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290780 | MtrunA17_Chr8g0364961 | 99.299 | 856 | 6 | 0 | 1 | 856 | 1 | 856 | 0.0 | 1764 |
| Msa1290780 | MtrunA17_Chr1g0209251 | 66.627 | 845 | 274 | 2 | 1 | 839 | 1 | 843 | 0.0 | 1191 |
| Msa1290780 | MtrunA17_Chr4g0041381 | 63.466 | 854 | 297 | 3 | 1 | 841 | 1 | 852 | 0.0 | 1149 |
| Msa1290780 | MtrunA17_Chr8g0391971 | 65.141 | 852 | 281 | 7 | 1 | 839 | 1 | 849 | 0.0 | 1147 |
| Msa1290780 | MtrunA17_Chr1g0161531 | 63.934 | 854 | 292 | 6 | 1 | 840 | 1 | 852 | 0.0 | 1130 |
| Msa1290780 | MtrunA17_Chr4g0073041 | 62.247 | 792 | 289 | 5 | 52 | 839 | 55 | 840 | 0.0 | 1036 |
| Msa1290780 | MtrunA17_Chr3g0117891 | 60.053 | 751 | 299 | 1 | 77 | 827 | 3 | 752 | 0.0 | 925 |
| Msa1290780 | MtrunA17_Chr3g0107401 | 54.348 | 598 | 243 | 3 | 56 | 653 | 2 | 569 | 0.0 | 625 |
| Msa1290780 | MtrunA17_Chr2g0314621 | 34.252 | 762 | 426 | 21 | 52 | 787 | 122 | 834 | 4.07e-134 | 424 |
| Msa1290780 | MtrunA17_Chr8g0359371 | 34.165 | 802 | 434 | 23 | 52 | 814 | 83 | 829 | 2.13e-132 | 418 |
| Msa1290780 | MtrunA17_Chr8g0380051 | 38.788 | 330 | 174 | 7 | 52 | 374 | 75 | 383 | 3.22e-67 | 231 |
| Msa1290780 | MtrunA17_Chr3g0107421 | 54.857 | 175 | 79 | 0 | 246 | 420 | 1 | 175 | 1.70e-57 | 194 |
| Msa1290780 | MtrunA17_Chr3g0116901 | 57.718 | 149 | 62 | 1 | 38 | 186 | 23 | 170 | 2.67e-52 | 180 |
| Msa1290780 | MtrunA17_Chr8g0380061 | 30.892 | 437 | 248 | 13 | 381 | 800 | 5 | 404 | 2.43e-50 | 185 |
| Msa1290780 | MtrunA17_Chr3g0107411 | 53.741 | 147 | 68 | 0 | 437 | 583 | 1 | 147 | 9.46e-48 | 167 |
| Msa1290780 | MtrunA17_Chr3g0107431 | 47.458 | 118 | 47 | 2 | 50 | 167 | 7 | 109 | 2.33e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1290780 | AT1G23870.1 | 74.510 | 867 | 209 | 3 | 1 | 855 | 1 | 867 | 0.0 | 1369 |
| Msa1290780 | AT1G70290.1 | 72.875 | 859 | 226 | 3 | 1 | 855 | 1 | 856 | 0.0 | 1337 |
| Msa1290780 | AT1G60140.6 | 72.125 | 861 | 234 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1330 |
| Msa1290780 | AT1G60140.1 | 72.125 | 861 | 234 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1330 |
| Msa1290780 | AT1G60140.2 | 72.125 | 861 | 234 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1330 |
| Msa1290780 | AT1G60140.5 | 72.125 | 861 | 234 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1330 |
| Msa1290780 | AT1G60140.4 | 72.125 | 861 | 234 | 1 | 1 | 855 | 1 | 861 | 0.0 | 1330 |
| Msa1290780 | AT1G70290.2 | 68.568 | 859 | 225 | 4 | 1 | 855 | 1 | 818 | 0.0 | 1239 |
| Msa1290780 | AT1G60140.3 | 73.448 | 757 | 195 | 1 | 1 | 751 | 1 | 757 | 0.0 | 1194 |
| Msa1290780 | AT4G17770.1 | 64.852 | 845 | 289 | 2 | 1 | 838 | 1 | 844 | 0.0 | 1177 |
| Msa1290780 | AT4G17770.2 | 64.852 | 845 | 289 | 2 | 1 | 838 | 1 | 844 | 0.0 | 1177 |
| Msa1290780 | AT1G68020.2 | 64.136 | 856 | 290 | 4 | 1 | 839 | 1 | 856 | 0.0 | 1159 |
| Msa1290780 | AT1G68020.3 | 64.136 | 856 | 290 | 4 | 1 | 839 | 1 | 856 | 0.0 | 1159 |
| Msa1290780 | AT1G06410.3 | 63.077 | 845 | 296 | 4 | 1 | 837 | 1 | 837 | 0.0 | 1125 |
| Msa1290780 | AT1G06410.1 | 63.077 | 845 | 296 | 4 | 1 | 837 | 1 | 837 | 0.0 | 1125 |
| Msa1290780 | AT1G06410.2 | 63.077 | 845 | 296 | 4 | 1 | 837 | 1 | 837 | 0.0 | 1125 |
| Msa1290780 | AT2G18700.1 | 60.327 | 857 | 326 | 6 | 1 | 851 | 1 | 849 | 0.0 | 1080 |
| Msa1290780 | AT1G68020.1 | 63.623 | 679 | 230 | 4 | 1 | 662 | 1 | 679 | 0.0 | 917 |
| Msa1290780 | AT1G16980.1 | 35.688 | 807 | 458 | 24 | 48 | 834 | 7 | 772 | 9.07e-146 | 451 |
| Msa1290780 | AT4G27550.2 | 33.052 | 829 | 469 | 22 | 51 | 838 | 2 | 785 | 2.45e-133 | 417 |
| Msa1290780 | AT4G27550.1 | 32.931 | 829 | 477 | 22 | 52 | 838 | 3 | 794 | 1.04e-132 | 416 |
| Msa1290780 | AT1G78580.4 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.84e-132 | 419 |
| Msa1290780 | AT1G78580.1 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.84e-132 | 419 |
| Msa1290780 | AT1G78580.2 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.84e-132 | 419 |
| Msa1290780 | AT1G78580.3 | 33.805 | 778 | 432 | 20 | 52 | 800 | 91 | 814 | 2.84e-132 | 419 |
| Msa1290780 | AT1G16980.2 | 35.266 | 638 | 362 | 18 | 48 | 675 | 7 | 603 | 1.58e-118 | 374 |
Find 235 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGTGGATCAGATTCTTTC+TGG | 0.076554 | 8_3:-45750961 | Msa1290780:three_prime_UTR |
| ACAACTTCACCCTGCAAATT+TGG | 0.106547 | 8_3:+45752748 | None:intergenic |
| ACATGTATAGTTACATTATT+TGG | 0.165580 | 8_3:-45750747 | Msa1290780:three_prime_UTR |
| TGGGGAATTGGTCTGGGCTT+GGG | 0.169334 | 8_3:-45752169 | Msa1290780:CDS |
| CTGGGGAATTGGTCTGGGCT+TGG | 0.187166 | 8_3:-45752170 | Msa1290780:CDS |
| CAAGATGCAGACCCTGATTT+TGG | 0.207528 | 8_3:-45751615 | Msa1290780:CDS |
| AAGAGGATCAATGAAATTTA+TGG | 0.210673 | 8_3:-45752646 | Msa1290780:CDS |
| ACTATACATGTTTGAAATTT+CGG | 0.241341 | 8_3:+45750759 | None:intergenic |
| ACATCAATTGTTATATTTAC+TGG | 0.255436 | 8_3:-45750855 | Msa1290780:three_prime_UTR |
| CCAAGGGTTATGACTGTTCC+TGG | 0.261011 | 8_3:-45753738 | Msa1290780:CDS |
| GGGGAATTGGTCTGGGCTTG+GGG | 0.266295 | 8_3:-45752168 | Msa1290780:CDS |
| ATAAATCCTGCAAGGGGTTC+AGG | 0.270561 | 8_3:-45752712 | Msa1290780:CDS |
| TTACATACATAATTCTATTA+TGG | 0.271576 | 8_3:-45750724 | Msa1290780:three_prime_UTR |
| TTGAGAATTTCATCCCTTAC+TGG | 0.274615 | 8_3:+45753111 | None:intergenic |
| CTCTAAGCTAAAAGAGATTC+AGG | 0.278734 | 8_3:-45752875 | Msa1290780:CDS |
| CTTCTCTGAGTGGGGCCATC+AGG | 0.282889 | 8_3:-45752381 | Msa1290780:CDS |
| GATGCCATGCAAACCGATTC+AGG | 0.283524 | 8_3:+45750935 | None:intergenic |
| AAAGATAAGAAAGTTATTCT+TGG | 0.285155 | 8_3:-45752844 | Msa1290780:CDS |
| CTGGAATTGGGCAAGATGTT+TGG | 0.285774 | 8_3:+45751115 | None:intergenic |
| GAATCAGATGTTAGTTCTTC+TGG | 0.292836 | 8_3:-45753693 | Msa1290780:CDS |
| GCAAAGATCATTATACTAAA+AGG | 0.294692 | 8_3:-45752195 | Msa1290780:CDS |
| CAAGTGGTCCAGCAATTCTT+TGG | 0.301605 | 8_3:+45751581 | None:intergenic |
| ACCCTAGACAAAAGCTTATT+AGG | 0.311946 | 8_3:+45750652 | None:intergenic |
| GGGATTATTTCTAACCTTGA+TGG | 0.317888 | 8_3:-45753717 | Msa1290780:CDS |
| ATAACCCTTGGAAGACTTCT+TGG | 0.323153 | 8_3:+45753750 | None:intergenic |
| TGAGAAGGTTCTCTTGAATA+TGG | 0.324266 | 8_3:-45751369 | Msa1290780:CDS |
| TACTCATGATGTGGCATATT+GGG | 0.324520 | 8_3:-45752251 | Msa1290780:CDS |
| TCCCATCATCTGAAATTTAC+CGG | 0.324934 | 8_3:-45753140 | Msa1290780:CDS |
| CAGCAATTCTTTGGCTTGGC+AGG | 0.325831 | 8_3:+45751590 | None:intergenic |
| CAACTTCACCCTGCAAATTT+GGG | 0.326749 | 8_3:+45752749 | None:intergenic |
| CACGAAATCTGGTGGATTAC+CGG | 0.327222 | 8_3:+45751340 | None:intergenic |
| TCCTTCCCTGAACCCCTTGC+AGG | 0.330095 | 8_3:+45752706 | None:intergenic |
| TTTAGTATAATGATCTTTGC+AGG | 0.332751 | 8_3:+45752198 | None:intergenic |
| GCTTGGCAGGAGCCAAAATC+AGG | 0.332771 | 8_3:+45751603 | None:intergenic |
| GTGTGGATCAGATTCTTTCT+GGG | 0.339981 | 8_3:-45750960 | Msa1290780:three_prime_UTR |
| ACTAAAAGGTGCTGGGGAAT+TGG | 0.344491 | 8_3:-45752181 | Msa1290780:CDS |
| TCTCAAAAGAAACCTGGAAT+TGG | 0.347950 | 8_3:+45751102 | None:intergenic |
| AAGGTGCTGGGGAATTGGTC+TGG | 0.348234 | 8_3:-45752176 | Msa1290780:CDS |
| TGGAATTGGGCAAGATGTTT+GGG | 0.350397 | 8_3:+45751116 | None:intergenic |
| CTTGTTGTGTCTGAGTTCAT+TGG | 0.350593 | 8_3:-45752412 | Msa1290780:CDS |
| GAGATATTGATACTGCTAAA+TGG | 0.353153 | 8_3:-45753617 | Msa1290780:CDS |
| CCAATGCACATCACGAAATC+TGG | 0.354845 | 8_3:+45751329 | None:intergenic |
| CGATTTCATCGAGTTAAACT+TGG | 0.356832 | 8_3:-45753183 | Msa1290780:CDS |
| GGGTTCAGGGAAGGATGTTC+AGG | 0.357166 | 8_3:-45752698 | Msa1290780:CDS |
| TTGTTGAATTCGGATTTAAT+TGG | 0.359446 | 8_3:-45753084 | Msa1290780:CDS |
| ATTTGTTTGCGGATCTTGAT+TGG | 0.360978 | 8_3:-45751731 | Msa1290780:CDS |
| TTAAGCACAGATATGACTTC+AGG | 0.363121 | 8_3:+45751998 | None:intergenic |
| CTGCCAAGCCAAAGAATTGC+TGG | 0.368870 | 8_3:-45751589 | Msa1290780:CDS |
| TCTCAAAGGATTGTTGAATT+CGG | 0.369451 | 8_3:-45753094 | Msa1290780:CDS |
| CATACAAAAGAACTAGTAGA+AGG | 0.371718 | 8_3:-45752084 | Msa1290780:CDS |
| AATATCGTGTTCATTGTTAG+TGG | 0.373245 | 8_3:-45751953 | Msa1290780:CDS |
| TTCTTTCTGGGCTCCTGAAT+CGG | 0.378445 | 8_3:-45750948 | Msa1290780:three_prime_UTR |
| ATAAGCACTCTTCTCGAAAC+GGG | 0.382221 | 8_3:+45752579 | None:intergenic |
| TTTAGCTTAGAGGATGTAGA+AGG | 0.386302 | 8_3:+45752886 | None:intergenic |
| AGCATATGGGTAGCATATAA+TGG | 0.386638 | 8_3:+45753364 | None:intergenic |
| CAAACATCTTGCCCAATTCC+AGG | 0.387739 | 8_3:-45751114 | Msa1290780:CDS |
| GGGCCATCAGGGTCAATCCC+TGG | 0.389275 | 8_3:-45752369 | Msa1290780:CDS |
| ATAAATTTCATTGATCCTCT+TGG | 0.390480 | 8_3:+45752648 | None:intergenic |
| TAACCCTTGGAAGACTTCTT+GGG | 0.392932 | 8_3:+45753751 | None:intergenic |
| TATGAATTTAGCCCTCAGTA+TGG | 0.393080 | 8_3:-45752323 | Msa1290780:CDS |
| GCAGCAGAACCCAAATTTGC+AGG | 0.398626 | 8_3:-45752758 | Msa1290780:CDS |
| GATGTTGTAAAGTTGCTTGA+TGG | 0.401203 | 8_3:-45751164 | Msa1290780:CDS |
| CTGCAAACAATATATTTGTA+TGG | 0.405626 | 8_3:+45752499 | None:intergenic |
| GAATCTAAGCGCGGACATAT+AGG | 0.407020 | 8_3:-45752994 | Msa1290780:CDS |
| TAACGGCGACGGCGAAGTTC+CGG | 0.408001 | 8_3:+45755702 | None:intergenic |
| CTTCTCAGCTACCAAACCTT+TGG | 0.411552 | 8_3:+45751385 | None:intergenic |
| GCCATCTTTCTTGATTATGA+TGG | 0.412733 | 8_3:-45752061 | Msa1290780:CDS |
| ATCATTATACTAAAAGGTGC+TGG | 0.413565 | 8_3:-45752189 | Msa1290780:CDS |
| GGCAGGCCAAACAGCATTGT+TGG | 0.415116 | 8_3:-45751066 | Msa1290780:three_prime_UTR |
| GTTGTTCACCTTCTCTGAGT+GGG | 0.416077 | 8_3:-45752390 | Msa1290780:CDS |
| GTCCGGTAAATTTCAGATGA+TGG | 0.420016 | 8_3:+45753138 | None:intergenic |
| TTCTATTACAATTAAAAGAC+GGG | 0.420368 | 8_3:-45753569 | Msa1290780:CDS |
| ATCACCATGATCTGAGCATA+TGG | 0.421283 | 8_3:+45753350 | None:intergenic |
| CTCAAAAGAAACCTGGAATT+GGG | 0.424009 | 8_3:+45751103 | None:intergenic |
| TGAAATTGCTCAGAGATTAC+TGG | 0.424931 | 8_3:-45753478 | Msa1290780:CDS |
| GTACTCATGATGTGGCATAT+TGG | 0.429323 | 8_3:-45752252 | Msa1290780:CDS |
| TTCTTAAGTGTAAAGGTGTA+TGG | 0.435154 | 8_3:+45750545 | None:intergenic |
| CAAGAGATTCTCTGAATGAA+TGG | 0.436703 | 8_3:-45751925 | Msa1290780:CDS |
| CAATATATTTGTATGGGACT+AGG | 0.441769 | 8_3:+45752506 | None:intergenic |
| CTGCTAAATGGTGTTTCAGT+TGG | 0.444648 | 8_3:-45753605 | Msa1290780:CDS |
| CAAATATATTGTTTGCAGAC+AGG | 0.445837 | 8_3:-45752494 | Msa1290780:CDS |
| CTTTGACCGAGTGCTTTGGC+AGG | 0.445978 | 8_3:-45753325 | Msa1290780:CDS |
| TTTACCGGACTTTGCCAGTA+AGG | 0.446014 | 8_3:-45753125 | Msa1290780:CDS |
| CAGACAGGGAACTGCAAAGC+TGG | 0.446931 | 8_3:-45752479 | Msa1290780:CDS |
| ATGTTAGTTCTTCTGGATGT+CGG | 0.447873 | 8_3:-45753686 | Msa1290780:CDS |
| CTGCAGGTCATGGGGTAGAA+AGG | 0.448467 | 8_3:+45753434 | None:intergenic |
| GAATCGGTTTGCATGGCATC+AGG | 0.449527 | 8_3:-45750932 | Msa1290780:three_prime_UTR |
| GGTGGAATAGCGACTCTGAA+TGG | 0.451271 | 8_3:-45751764 | Msa1290780:CDS |
| ATCGCTTTGACCGAGTGCTT+TGG | 0.451315 | 8_3:-45753329 | Msa1290780:CDS |
| TGCGGATCTTGATTGGAAAC+AGG | 0.453319 | 8_3:-45751724 | Msa1290780:CDS |
| CATATAGGACTTGATTACTT+TGG | 0.456053 | 8_3:-45752979 | Msa1290780:CDS |
| AACGAACCAACAATGCTGTT+TGG | 0.456508 | 8_3:+45751060 | None:intergenic |
| ACAGGGAGTAACCAAAGGTT+TGG | 0.457006 | 8_3:-45751396 | Msa1290780:intron |
| GTTTACATCATGCAAACTGC+TGG | 0.460290 | 8_3:-45751903 | Msa1290780:CDS |
| CCAGATTTCGTGATGTGCAT+TGG | 0.463267 | 8_3:-45751329 | Msa1290780:CDS |
| GGCAAACATGTTGCCGCTGC+AGG | 0.463803 | 8_3:-45753646 | Msa1290780:CDS |
| TGAAGTCAAGGAAAGTGCTT+TGG | 0.467204 | 8_3:-45751649 | Msa1290780:CDS |
| TAAATCCTGCAAGGGGTTCA+GGG | 0.467451 | 8_3:-45752711 | Msa1290780:CDS |
| CACAGATATGACTTCAGGGC+TGG | 0.467927 | 8_3:+45752003 | None:intergenic |
| TGTTAGTTCTTCTGGATGTC+GGG | 0.472937 | 8_3:-45753685 | Msa1290780:CDS |
| CAAAGGTTTGGTAGCTGAGA+AGG | 0.472991 | 8_3:-45751384 | Msa1290780:CDS |
| AGGTGCTGGGGAATTGGTCT+GGG | 0.473831 | 8_3:-45752175 | Msa1290780:CDS |
| CTGTGCTCTCAAAAGAAACC+TGG | 0.476062 | 8_3:+45751096 | None:intergenic |
| AGAGTTATTTCACTTTCTCA+TGG | 0.477242 | 8_3:-45752142 | Msa1290780:CDS |
| CTGCAGTAGAATGCTAGGTC+TGG | 0.477809 | 8_3:-45753022 | Msa1290780:CDS |
| GTTGCATCGTCAATGCTGTA+AGG | 0.478965 | 8_3:-45752540 | Msa1290780:CDS |
| AGTACAAGCAACGATCAATC+AGG | 0.478979 | 8_3:+45750794 | None:intergenic |
| TTCTCTGAGTGGGGCCATCA+GGG | 0.481545 | 8_3:-45752380 | Msa1290780:CDS |
| ATGAATTTAGCCCTCAGTAT+GGG | 0.482655 | 8_3:-45752322 | Msa1290780:CDS |
| CAAGGGTTATGACTGTTCCT+GGG | 0.488044 | 8_3:-45753737 | Msa1290780:CDS |
| CAAAGAATTGCTGGACCACT+TGG | 0.490557 | 8_3:-45751580 | Msa1290780:CDS |
| TCTTGCTGCAGTAGAATGCT+AGG | 0.494534 | 8_3:-45753027 | Msa1290780:CDS |
| AGCAACTGCATCTATATCCC+AGG | 0.496254 | 8_3:+45752351 | None:intergenic |
| GTTGAAGTTCTTAAGTGTAA+AGG | 0.497670 | 8_3:+45750538 | None:intergenic |
| GAGAGCACAGTTTCTTAGGC+AGG | 0.499109 | 8_3:-45751083 | Msa1290780:exon |
| TCCGGTAAATTTCAGATGAT+GGG | 0.500703 | 8_3:+45753139 | None:intergenic |
| TCAAATTATAAATCCTGCAA+GGG | 0.500735 | 8_3:-45752719 | Msa1290780:CDS |
| TCTGTATACGACTGCATGAC+AGG | 0.500792 | 8_3:+45751693 | None:intergenic |
| GGTCCAGCAATTCTTTGGCT+TGG | 0.501011 | 8_3:+45751586 | None:intergenic |
| GGCTCCTGAATCGGTTTGCA+TGG | 0.501103 | 8_3:-45750939 | Msa1290780:three_prime_UTR |
| ACCCAAACAAAATCATCATC+GGG | 0.501271 | 8_3:+45753249 | None:intergenic |
| TGCTAAATGGTGTTTCAGTT+GGG | 0.502656 | 8_3:-45753604 | Msa1290780:CDS |
| CATCCCTTACTGGCAAAGTC+CGG | 0.504874 | 8_3:+45753121 | None:intergenic |
| CTCTTGAATATGGTTAATGC+CGG | 0.507275 | 8_3:-45751359 | Msa1290780:CDS |
| GCCGTCGCCGTTACCGTCGC+CGG | 0.507426 | 8_3:-45755692 | Msa1290780:intron |
| ACAAAATCGCACTATTCGTC+AGG | 0.512499 | 8_3:+45750985 | None:intergenic |
| ATTCTATTACAATTAAAAGA+CGG | 0.514519 | 8_3:-45753570 | Msa1290780:CDS |
| AATAAGCACTCTTCTCGAAA+CGG | 0.515130 | 8_3:+45752578 | None:intergenic |
| CTACCCATATGCTCAGATCA+TGG | 0.515637 | 8_3:-45753354 | Msa1290780:CDS |
| AACCCAAACAAAATCATCAT+CGG | 0.516929 | 8_3:+45753248 | None:intergenic |
| TCGTGTTCATTGTTAGTGGA+AGG | 0.517631 | 8_3:-45751949 | Msa1290780:CDS |
| GAACCAGCAATTGTTAAAAG+AGG | 0.517681 | 8_3:-45751540 | Msa1290780:CDS |
| ACAGATATGACTTCAGGGCT+GGG | 0.520588 | 8_3:+45752004 | None:intergenic |
| GTGGAATAGCGACTCTGAAT+GGG | 0.520863 | 8_3:-45751763 | Msa1290780:CDS |
| AAATATATTGTTTGCAGACA+GGG | 0.522683 | 8_3:-45752493 | Msa1290780:CDS |
| ATGGTGTTTCAGTTGGGATG+AGG | 0.523696 | 8_3:-45753598 | Msa1290780:CDS |
| TAAGCACAGATATGACTTCA+GGG | 0.524391 | 8_3:+45751999 | None:intergenic |
| GGCCATCAGGGTCAATCCCT+GGG | 0.525071 | 8_3:-45752368 | Msa1290780:CDS |
| GAAGGTTGACGTGTGGTTCG+AGG | 0.526649 | 8_3:-45750910 | Msa1290780:three_prime_UTR |
| GTTCTTCTGGATGTCGGGAG+CGG | 0.526826 | 8_3:-45753680 | Msa1290780:CDS |
| TCATTATACTAAAAGGTGCT+GGG | 0.528112 | 8_3:-45752188 | Msa1290780:CDS |
| TGCTGATACAATATGGTCAA+TGG | 0.528241 | 8_3:+45752105 | None:intergenic |
| GGAAACAAGTCATTTGTTTG+CGG | 0.528499 | 8_3:-45751742 | Msa1290780:CDS |
| TTCAAATTATAAATCCTGCA+AGG | 0.529329 | 8_3:-45752720 | Msa1290780:CDS |
| ATCGTCAATGCTGTAAGGGA+TGG | 0.532615 | 8_3:-45752535 | Msa1290780:CDS |
| TGGATCTAATATTGAAGTCA+AGG | 0.535654 | 8_3:-45751661 | Msa1290780:CDS |
| CATTGTTGGTTCGTTATGCG+AGG | 0.536774 | 8_3:-45751052 | Msa1290780:three_prime_UTR |
| TGAGATAGATGCTAGTGAGC+AGG | 0.537498 | 8_3:-45753502 | Msa1290780:CDS |
| CCAGGAACAGTCATAACCCT+TGG | 0.540553 | 8_3:+45753738 | None:intergenic |
| GCTTAACTTCAACAATATGC+TGG | 0.541548 | 8_3:+45751517 | None:intergenic |
| CAATCTGAAATTTCTAGCTG+TGG | 0.541729 | 8_3:-45752791 | Msa1290780:CDS |
| GAACTTACCGGCGACGGTAA+CGG | 0.543690 | 8_3:+45755685 | None:intergenic |
| GCCATCATAATCAAGAAAGA+TGG | 0.544414 | 8_3:+45752060 | None:intergenic |
| TTGTTCACCTTCTCTGAGTG+GGG | 0.546280 | 8_3:-45752389 | Msa1290780:CDS |
| TATTGTTGAAGTTAAGCCAC+AGG | 0.548984 | 8_3:-45751511 | Msa1290780:intron |
| CAGATATGACTTCAGGGCTG+GGG | 0.549497 | 8_3:+45752005 | None:intergenic |
| CTGGGACTTGCAGCTGAACA+TGG | 0.550416 | 8_3:-45751884 | Msa1290780:CDS |
| AATCGTTTCCTCAAGAAAGT+AGG | 0.550967 | 8_3:+45753201 | None:intergenic |
| TAAGAAAGTTATTCTTGGTG+TGG | 0.551636 | 8_3:-45752839 | Msa1290780:CDS |
| TGAATTTAGCCCTCAGTATG+GGG | 0.553092 | 8_3:-45752321 | Msa1290780:CDS |
| TGCAAACAATATATTTGTAT+GGG | 0.553617 | 8_3:+45752500 | None:intergenic |
| GGAAGACTTCTTGGGGTGTG+AGG | 0.553746 | 8_3:+45753759 | None:intergenic |
| TGCAAAGCTGGATGAAGCTG+TGG | 0.555064 | 8_3:-45752467 | Msa1290780:CDS |
| ACTGGTGCTTCATTGAGCAT+CGG | 0.556417 | 8_3:-45750837 | Msa1290780:three_prime_UTR |
| CACTACGCGTTTCACCTCAC+CGG | 0.557659 | 8_3:-45755721 | Msa1290780:five_prime_UTR |
| TTACCGGACTTTGCCAGTAA+GGG | 0.558832 | 8_3:-45753124 | Msa1290780:CDS |
| CATAAGCCTGCCAAAGCACT+CGG | 0.561670 | 8_3:+45753319 | None:intergenic |
| AATCTATGTGGGTTCGCTCA+AGG | 0.563455 | 8_3:-45753526 | Msa1290780:CDS |
| TGATACTGAGGTAATCTATG+TGG | 0.564061 | 8_3:-45753538 | Msa1290780:CDS |
| TCACCATGATCTGAGCATAT+GGG | 0.565672 | 8_3:+45753351 | None:intergenic |
| ACCGGCGACGGTAACGGCGA+CGG | 0.567252 | 8_3:+45755691 | None:intergenic |
| GAGCGGTCAATGATAATGAC+TGG | 0.567271 | 8_3:+45752607 | None:intergenic |
| CGTGTTCATTGTTAGTGGAA+GGG | 0.567716 | 8_3:-45751948 | Msa1290780:CDS |
| TCCTGCAAGGGGTTCAGGGA+AGG | 0.568476 | 8_3:-45752707 | Msa1290780:CDS |
| GGTTGTTCACCTTCTCTGAG+TGG | 0.569153 | 8_3:-45752391 | Msa1290780:CDS |
| GATTTCATCGAGTTAAACTT+GGG | 0.570858 | 8_3:-45753182 | Msa1290780:CDS |
| CAGGATTTATAATTTGAACA+AGG | 0.572858 | 8_3:+45752725 | None:intergenic |
| AATATTTGCAGACAAAGTCA+TGG | 0.573166 | 8_3:-45753283 | Msa1290780:CDS |
| GATACTGAGGTAATCTATGT+GGG | 0.575365 | 8_3:-45753537 | Msa1290780:CDS |
| TATTCTTGGTGTGGACGACA+TGG | 0.577773 | 8_3:-45752830 | Msa1290780:CDS |
| AGATATGACTTCAGGGCTGG+GGG | 0.578681 | 8_3:+45752006 | None:intergenic |
| CATATCGATAGTGTTTCTCA+TGG | 0.584215 | 8_3:+45752278 | None:intergenic |
| TCTTTACAGGGAGTAACCAA+AGG | 0.585367 | 8_3:-45751401 | Msa1290780:intron |
| TTTGATTTGTTGAGGTAGCG+AGG | 0.586241 | 8_3:+45751141 | None:intergenic |
| CGGTAGGAATTCACATGGGT+AGG | 0.588120 | 8_3:-45752930 | Msa1290780:CDS |
| ATCCCAGGGATTGACCCTGA+TGG | 0.588505 | 8_3:+45752366 | None:intergenic |
| ATACAAAAGAACTAGTAGAA+GGG | 0.590862 | 8_3:-45752083 | Msa1290780:CDS |
| AACCCTTGGAAGACTTCTTG+GGG | 0.592251 | 8_3:+45753752 | None:intergenic |
| TCGTATACAGAAGCAACTGA+TGG | 0.593251 | 8_3:-45751681 | Msa1290780:CDS |
| TCAAGGTTAGAAATAATCCC+AGG | 0.593548 | 8_3:+45753720 | None:intergenic |
| ATTGTTGGTTCGTTATGCGA+GGG | 0.595063 | 8_3:-45751051 | Msa1290780:three_prime_UTR |
| ACACCCCAAGAAGTCTTCCA+AGG | 0.595682 | 8_3:-45753755 | Msa1290780:CDS |
| CTACCCATGTGAATTCCTAC+CGG | 0.597503 | 8_3:+45752931 | None:intergenic |
| CGGTTTGCATGGCATCAGGA+AGG | 0.601497 | 8_3:-45750928 | Msa1290780:three_prime_UTR |
| ATGATGGGAAAGGACTATGA+AGG | 0.602097 | 8_3:+45753154 | None:intergenic |
| AAGCTTATTTAATTGCCAAG+AGG | 0.604527 | 8_3:-45752663 | Msa1290780:CDS |
| CGGGAGCTGATGGTAACGAC+GGG | 0.607532 | 8_3:+45751252 | None:intergenic |
| TAAATTTCAGATGATGGGAA+AGG | 0.607697 | 8_3:+45753144 | None:intergenic |
| GTAAGGGATGAAATTCTCAA+AGG | 0.608917 | 8_3:-45753108 | Msa1290780:CDS |
| CAAATTATAAATCCTGCAAG+GGG | 0.610053 | 8_3:-45752718 | Msa1290780:CDS |
| TTTACATCATGCAAACTGCT+GGG | 0.611466 | 8_3:-45751902 | Msa1290780:CDS |
| TGGAAAGAACAAAATGAGAA+CGG | 0.611607 | 8_3:+45755801 | None:intergenic |
| ATGCACATCACGAAATCTGG+TGG | 0.613992 | 8_3:+45751332 | None:intergenic |
| CTGATGGCCCCACTCAGAGA+AGG | 0.614227 | 8_3:+45752382 | None:intergenic |
| TGATGTGCATTGGAGATGAT+AGG | 0.616649 | 8_3:-45751319 | Msa1290780:CDS |
| CATTATACTAAAAGGTGCTG+GGG | 0.617606 | 8_3:-45752187 | Msa1290780:CDS |
| CAGCAGAACCCAAATTTGCA+GGG | 0.618312 | 8_3:-45752757 | Msa1290780:CDS |
| TAACATCTGATTCACCATCA+AGG | 0.622114 | 8_3:+45753703 | None:intergenic |
| ATATGTTAGTACTCATGATG+TGG | 0.622726 | 8_3:-45752260 | Msa1290780:CDS |
| CAGGTCATGGGGTAGAAAGG+TGG | 0.624978 | 8_3:+45753437 | None:intergenic |
| ACTGGATGACTTTAATTGCG+TGG | 0.625192 | 8_3:-45753460 | Msa1290780:CDS |
| CTTGGCAGGAGCCAAAATCA+GGG | 0.629827 | 8_3:+45751604 | None:intergenic |
| TCGTCAATGCTGTAAGGGAT+GGG | 0.634025 | 8_3:-45752534 | Msa1290780:CDS |
| GAATTTAGCCCTCAGTATGG+GGG | 0.635859 | 8_3:-45752320 | Msa1290780:CDS |
| GGTAGGTAGGAAGCCTAGCA+AGG | 0.637239 | 8_3:-45751213 | Msa1290780:CDS |
| GGTAGCATATAATGGAAGAG+AGG | 0.639482 | 8_3:+45753372 | None:intergenic |
| AAGTAGGCAAAATCATCAAG+TGG | 0.641749 | 8_3:+45753217 | None:intergenic |
| CACCCCAAGAAGTCTTCCAA+GGG | 0.641869 | 8_3:-45753754 | Msa1290780:CDS |
| GCAACTGCATCTATATCCCA+GGG | 0.642398 | 8_3:+45752352 | None:intergenic |
| GAGTTTGAACTTACCGGCGA+CGG | 0.649294 | 8_3:+45755679 | None:intergenic |
| TCAAGGAAAGTGCTTTGGTG+TGG | 0.650646 | 8_3:-45751644 | Msa1290780:CDS |
| TAGCAAGAACACTTTCCAAG+TGG | 0.651389 | 8_3:+45751565 | None:intergenic |
| TCGGGAGCTGATGGTAACGA+CGG | 0.659800 | 8_3:+45751251 | None:intergenic |
| TTTGCCGGTAGGAATTCACA+TGG | 0.662631 | 8_3:-45752935 | Msa1290780:CDS |
| TTGCATCGTCAATGCTGTAA+GGG | 0.663687 | 8_3:-45752539 | Msa1290780:CDS |
| TAAGCACTCTTCTCGAAACG+GGG | 0.682811 | 8_3:+45752580 | None:intergenic |
| GCAAAGCTGGATGAAGCTGT+GGG | 0.684464 | 8_3:-45752466 | Msa1290780:CDS |
| ACAACAAGCATGCTTGTACG+AGG | 0.685754 | 8_3:+45752427 | None:intergenic |
| TCGGGAGCGGAAAATCATTG+TGG | 0.689766 | 8_3:-45753667 | Msa1290780:CDS |
| TCTCGAAACGGGGAACAGAG+CGG | 0.692951 | 8_3:+45752590 | None:intergenic |
| GGATCTTGATTGGAAACAGG+TGG | 0.695331 | 8_3:-45751721 | Msa1290780:CDS |
| GCATCAGGAAGGTTGACGTG+TGG | 0.697540 | 8_3:-45750917 | Msa1290780:three_prime_UTR |
| CTGGACTATGAATCTAAGCG+CGG | 0.708845 | 8_3:-45753003 | Msa1290780:CDS |
| GCGACGGCGAAGTTCCGGTG+AGG | 0.728823 | 8_3:+45755707 | None:intergenic |
| TTGCCGGTAGGAATTCACAT+GGG | 0.730503 | 8_3:-45752934 | Msa1290780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GGAATATTTTTTTTTATTTT+TGG | - | chr8_3:45751156-45751175 | Msa1290780:CDS | 10.0% |
| !!! | ATTTTTTTTTATTTTTGGTT+TGG | - | chr8_3:45751161-45751180 | Msa1290780:CDS | 10.0% |
| !!! | TATATTTTTTTCTATTCTTT+TGG | + | chr8_3:45754501-45754520 | None:intergenic | 10.0% |
| !!! | GGAAAATTTTAATTTGATTT+TGG | - | chr8_3:45751213-45751232 | Msa1290780:CDS | 15.0% |
| !! | ATTTGTTTGTATTTGAATAA+AGG | - | chr8_3:45751374-45751393 | Msa1290780:CDS | 15.0% |
| !! | TTTGTTTGTATTTGAATAAA+GGG | - | chr8_3:45751375-45751394 | Msa1290780:CDS | 15.0% |
| !! | TGTACATGTTATTATAAATT+TGG | - | chr8_3:45751416-45751435 | Msa1290780:intron | 15.0% |
| !! | ATTATAAATTTGGAAAATGA+TGG | - | chr8_3:45751426-45751445 | Msa1290780:intron | 15.0% |
| !!! | AAAGTTACTTTGTTTAATTT+TGG | - | chr8_3:45751937-45751956 | Msa1290780:CDS | 15.0% |
| !! | AAATGAATGAATTATTACAA+GGG | - | chr8_3:45752283-45752302 | Msa1290780:CDS | 15.0% |
| !!! | TAGTATGTTAAATTTTTACA+TGG | - | chr8_3:45752354-45752373 | Msa1290780:CDS | 15.0% |
| !! | ATTCTATTACAATTAAAAGA+CGG | - | chr8_3:45752740-45752759 | Msa1290780:CDS | 15.0% |
| !!! | AAATTTTGATAAATATAGTG+CGG | + | chr8_3:45753357-45753376 | None:intergenic | 15.0% |
| !!! | TATATTTATCAAAATTTTGC+CGG | - | chr8_3:45753360-45753379 | Msa1290780:CDS | 15.0% |
| !!! | GTTTTATTAATATAAGATTG+TGG | + | chr8_3:45754285-45754304 | None:intergenic | 15.0% |
| !!! | TAATGTATTTTTTTATTTGC+AGG | - | chr8_3:45754525-45754544 | Msa1290780:intron | 15.0% |
| !! | TTACATACATAATTCTATTA+TGG | - | chr8_3:45755586-45755605 | Msa1290780:intron | 15.0% |
| !! | CAACAATTGAATTGAAAAAA+CGG | + | chr8_3:45750722-45750741 | None:intergenic | 20.0% |
| !!! | ATTTTATTTTTCATCGTGTT+TGG | - | chr8_3:45750991-45751010 | Msa1290780:three_prime_UTR | 20.0% |
| !! | GTAAATAAAATTATTGGGTT+TGG | + | chr8_3:45751028-45751047 | None:intergenic | 20.0% |
| !! | CTTTGTGAAAAAAAAAATTG+TGG | - | chr8_3:45751135-45751154 | Msa1290780:CDS | 20.0% |
| !! | AGGTTAAGATAATTGAAATA+GGG | - | chr8_3:45751192-45751211 | Msa1290780:CDS | 20.0% |
| !! | AAAAAATTACATCTTACAAG+TGG | + | chr8_3:45751680-45751699 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTTCATGTTTACA+TGG | - | chr8_3:45751714-45751733 | Msa1290780:CDS | 20.0% |
| !! | TTAAACAAAGTAACTTTACT+TGG | + | chr8_3:45751934-45751953 | None:intergenic | 20.0% |
| !! | TCAAGCATTTATTTCATTAT+AGG | + | chr8_3:45751966-45751985 | None:intergenic | 20.0% |
| !! | GTAATAATTCATTCATTTCA+GGG | + | chr8_3:45752281-45752300 | None:intergenic | 20.0% |
| !! | TGTAATAATTCATTCATTTC+AGG | + | chr8_3:45752282-45752301 | None:intergenic | 20.0% |
| !! | GAAATGAATGAATTATTACA+AGG | - | chr8_3:45752282-45752301 | Msa1290780:CDS | 20.0% |
| !! | TTCTATTACAATTAAAAGAC+GGG | - | chr8_3:45752741-45752760 | Msa1290780:CDS | 20.0% |
| !! | AAAGATAAGAAAGTTATTCT+TGG | - | chr8_3:45753466-45753485 | Msa1290780:CDS | 20.0% |
| !! | TGCAAACAATATATTTGTAT+GGG | + | chr8_3:45753813-45753832 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTATTCTTTTGGT+GGG | + | chr8_3:45754497-45754516 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCTATTCTTTTGG+TGG | + | chr8_3:45754498-45754517 | None:intergenic | 20.0% |
| !! | ACATCAATTGTTATATTTAC+TGG | - | chr8_3:45755455-45755474 | Msa1290780:intron | 20.0% |
| !!! | ACTATACATGTTTGAAATTT+CGG | + | chr8_3:45755554-45755573 | None:intergenic | 20.0% |
| !! | ACATGTATAGTTACATTATT+TGG | - | chr8_3:45755563-45755582 | Msa1290780:intron | 20.0% |
| !! | TACTCATTTTCTAAACTCTT+TGG | - | chr8_3:45750746-45750765 | Msa1290780:three_prime_UTR | 25.0% |
| ! | ATAGTAAACGATGAACAATT+TGG | + | chr8_3:45750868-45750887 | None:intergenic | 25.0% |
| ! | TTCACAAAGTGTAAACTTAT+AGG | + | chr8_3:45751124-45751143 | None:intergenic | 25.0% |
| !!! | TTTTTGGTTTGGATAATAAC+AGG | - | chr8_3:45751172-45751191 | Msa1290780:CDS | 25.0% |
| ! | CAGGTTAAGATAATTGAAAT+AGG | - | chr8_3:45751191-45751210 | Msa1290780:CDS | 25.0% |
| !! | TGGTTTAGATAAGTTTTTGT+TGG | - | chr8_3:45751233-45751252 | Msa1290780:CDS | 25.0% |
| !! | GGTTTAGATAAGTTTTTGTT+GGG | - | chr8_3:45751234-45751253 | Msa1290780:CDS | 25.0% |
| !! | GTTTAGATAAGTTTTTGTTG+GGG | - | chr8_3:45751235-45751254 | Msa1290780:CDS | 25.0% |
| !!! | GGTTTTTTTTCAGAAGAAAA+AGG | - | chr8_3:45751269-45751288 | Msa1290780:CDS | 25.0% |
| !!! | TTTTTTTCAGAAGAAAAAGG+TGG | - | chr8_3:45751272-45751291 | Msa1290780:CDS | 25.0% |
| ! | GTATAATTGATGAATGTACT+TGG | - | chr8_3:45751299-45751318 | Msa1290780:CDS | 25.0% |
| !! | TGTACTTGGATTGAAATTTT+TGG | - | chr8_3:45751313-45751332 | Msa1290780:CDS | 25.0% |
| ! | ACATCCAAAAAAACACATAA+TGG | + | chr8_3:45751340-45751359 | None:intergenic | 25.0% |
| !!! | ATTATGTGTTTTTTTGGATG+TGG | - | chr8_3:45751339-45751358 | Msa1290780:CDS | 25.0% |
| ! | ATTATCTATCATGTTCAAAG+TGG | - | chr8_3:45751577-45751596 | Msa1290780:CDS | 25.0% |
| !!! | TTCAAAGTGGTTTAAGTTTT+CGG | - | chr8_3:45751590-45751609 | Msa1290780:CDS | 25.0% |
| ! | CCAAATGAATATCATGTAAA+AGG | + | chr8_3:45751743-45751762 | None:intergenic | 25.0% |
| !! | CCTTTTACATGATATTCATT+TGG | - | chr8_3:45751740-45751759 | Msa1290780:CDS | 25.0% |
| ! | TAAAAAGTGAAACACTTACA+GGG | + | chr8_3:45751804-45751823 | None:intergenic | 25.0% |
| ! | TTAACATACTACATCTTACA+TGG | + | chr8_3:45752345-45752364 | None:intergenic | 25.0% |
| ! | ATCCTACGAATAATATATCA+CGG | + | chr8_3:45752384-45752403 | None:intergenic | 25.0% |
| ! | ACAGATTAACACAACATTTA+CGG | + | chr8_3:45752412-45752431 | None:intergenic | 25.0% |
| ! | TTGTTGAATTCGGATTTAAT+TGG | - | chr8_3:45753226-45753245 | Msa1290780:CDS | 25.0% |
| ! | CAGGATTTATAATTTGAACA+AGG | + | chr8_3:45753588-45753607 | None:intergenic | 25.0% |
| ! | TTCAAATTATAAATCCTGCA+AGG | - | chr8_3:45753590-45753609 | Msa1290780:CDS | 25.0% |
| ! | TCAAATTATAAATCCTGCAA+GGG | - | chr8_3:45753591-45753610 | Msa1290780:CDS | 25.0% |
| ! | ATAAATTTCATTGATCCTCT+TGG | + | chr8_3:45753665-45753684 | None:intergenic | 25.0% |
| ! | AAGAGGATCAATGAAATTTA+TGG | - | chr8_3:45753664-45753683 | Msa1290780:CDS | 25.0% |
| ! | CTGCAAACAATATATTTGTA+TGG | + | chr8_3:45753814-45753833 | None:intergenic | 25.0% |
| ! | AAATATATTGTTTGCAGACA+GGG | - | chr8_3:45753817-45753836 | Msa1290780:CDS | 25.0% |
| ! | TTTAGTATAATGATCTTTGC+AGG | + | chr8_3:45754115-45754134 | None:intergenic | 25.0% |
| ! | GCAAAGATCATTATACTAAA+AGG | - | chr8_3:45754115-45754134 | Msa1290780:intron | 25.0% |
| !! | TTTTGTATGCTGATACAATA+TGG | + | chr8_3:45754215-45754234 | None:intergenic | 25.0% |
| ! | ATACAAAAGAACTAGTAGAA+GGG | - | chr8_3:45754227-45754246 | Msa1290780:intron | 25.0% |
| !! | AACAATGAACACGATATTTT+TGG | + | chr8_3:45754355-45754374 | None:intergenic | 25.0% |
| !!! | TTTTTTCTATTCTTTTGGTG+GGG | + | chr8_3:45754496-45754515 | None:intergenic | 25.0% |
| !!! | TGTATTTTTTTATTTGCAGG+TGG | - | chr8_3:45754528-45754547 | Msa1290780:intron | 25.0% |
| !! | TCATGAATTTTCTCTTTACA+GGG | - | chr8_3:45754897-45754916 | Msa1290780:intron | 25.0% |
| ! | TAAAAAAATTCAAGTGAGTC+TGG | - | chr8_3:45755805-45755824 | Msa1290780:five_prime_UTR | 25.0% |
| TGGAAAGAACAAAATGAGAA+CGG | + | chr8_3:45750512-45750531 | None:intergenic | 30.0% | |
| AAATCTTCAGTAGTGAAAAG+TGG | + | chr8_3:45750674-45750693 | None:intergenic | 30.0% | |
| !!! | TGGACCATTATGTGTTTTTT+TGG | - | chr8_3:45751333-45751352 | Msa1290780:CDS | 30.0% |
| ! | ATAAAGGGTTTCTTTTTCTG+TGG | - | chr8_3:45751390-45751409 | Msa1290780:CDS | 30.0% |
| AAAATGATGGCACATGAATT+TGG | - | chr8_3:45751439-45751458 | Msa1290780:intron | 30.0% | |
| !!! | ATTTTTTACATCCATCTTGC+TGG | - | chr8_3:45751472-45751491 | Msa1290780:intron | 30.0% |
| !!! | TTTTTTACATCCATCTTGCT+GGG | - | chr8_3:45751473-45751492 | Msa1290780:intron | 30.0% |
| TGTCTGTAATAGTAGTTTAG+AGG | - | chr8_3:45751547-45751566 | Msa1290780:CDS | 30.0% | |
| ! | TACTATTTTGCTTGCATACA+TGG | - | chr8_3:45751653-45751672 | Msa1290780:CDS | 30.0% |
| GTAAAAAGTGAAACACTTAC+AGG | + | chr8_3:45751805-45751824 | None:intergenic | 30.0% | |
| ! | TTTACACGATTTTCATCTAG+TGG | - | chr8_3:45751820-45751839 | Msa1290780:intron | 30.0% |
| AATAAACAACGCAATTCAGA+TGG | + | chr8_3:45752187-45752206 | None:intergenic | 30.0% | |
| !! | TAGCTTGGTTTTCATATTGT+AGG | + | chr8_3:45752250-45752269 | None:intergenic | 30.0% |
| TCCTACGAATAATATATCAC+GGG | + | chr8_3:45752383-45752402 | None:intergenic | 30.0% | |
| GAGATATTGATACTGCTAAA+TGG | - | chr8_3:45752693-45752712 | Msa1290780:CDS | 30.0% | |
| AATATTTGCAGACAAAGTCA+TGG | - | chr8_3:45753027-45753046 | Msa1290780:CDS | 30.0% | |
| AACCCAAACAAAATCATCAT+CGG | + | chr8_3:45753065-45753084 | None:intergenic | 30.0% | |
| GATTTCATCGAGTTAAACTT+GGG | - | chr8_3:45753128-45753147 | Msa1290780:CDS | 30.0% | |
| !! | TAAATTTCAGATGATGGGAA+AGG | + | chr8_3:45753169-45753188 | None:intergenic | 30.0% |
| TCTCAAAGGATTGTTGAATT+CGG | - | chr8_3:45753216-45753235 | Msa1290780:CDS | 30.0% | |
| CATATAGGACTTGATTACTT+TGG | - | chr8_3:45753331-45753350 | Msa1290780:CDS | 30.0% | |
| ! | TTTATCAAAATTTTGCCGGT+AGG | - | chr8_3:45753364-45753383 | Msa1290780:CDS | 30.0% |
| TAAGAAAGTTATTCTTGGTG+TGG | - | chr8_3:45753471-45753490 | Msa1290780:CDS | 30.0% | |
| !! | GACGACATGGATATTTTTAA+GGG | - | chr8_3:45753493-45753512 | Msa1290780:CDS | 30.0% |
| CAAATTATAAATCCTGCAAG+GGG | - | chr8_3:45753592-45753611 | Msa1290780:CDS | 30.0% | |
| AAGCTTATTTAATTGCCAAG+AGG | - | chr8_3:45753647-45753666 | Msa1290780:CDS | 30.0% | |
| CAATATATTTGTATGGGACT+AGG | + | chr8_3:45753807-45753826 | None:intergenic | 30.0% | |
| CAAATATATTGTTTGCAGAC+AGG | - | chr8_3:45753816-45753835 | Msa1290780:CDS | 30.0% | |
| ATATGTTAGTACTCATGATG+TGG | - | chr8_3:45754050-45754069 | Msa1290780:intron | 30.0% | |
| ! | ATCATTATACTAAAAGGTGC+TGG | - | chr8_3:45754121-45754140 | Msa1290780:intron | 30.0% |
| !! | TCATTATACTAAAAGGTGCT+GGG | - | chr8_3:45754122-45754141 | Msa1290780:intron | 30.0% |
| ! | AGAGTTATTTCACTTTCTCA+TGG | - | chr8_3:45754168-45754187 | Msa1290780:intron | 30.0% |
| ! | TTTCACTTTCTCATGGTTTT+AGG | - | chr8_3:45754175-45754194 | Msa1290780:intron | 30.0% |
| CATACAAAAGAACTAGTAGA+AGG | - | chr8_3:45754226-45754245 | Msa1290780:intron | 30.0% | |
| AATATCGTGTTCATTGTTAG+TGG | - | chr8_3:45754357-45754376 | Msa1290780:intron | 30.0% | |
| !!! | CTGAACATGGTTACTTTTTA+AGG | - | chr8_3:45754439-45754458 | Msa1290780:intron | 30.0% |
| TGGATCTAATATTGAAGTCA+AGG | - | chr8_3:45754649-45754668 | Msa1290780:intron | 30.0% | |
| AATTTGAAAAACTCTACCTG+TGG | + | chr8_3:45754818-45754837 | None:intergenic | 30.0% | |
| ! | GTCATGAATTTTCTCTTTAC+AGG | - | chr8_3:45754896-45754915 | Msa1290780:intron | 30.0% |
| ! | AGAAAATATTTTGCCTTGCT+AGG | + | chr8_3:45755113-45755132 | None:intergenic | 30.0% |
| ! | TCCTGTGAATCAGAAATTTT+TGG | - | chr8_3:45755288-45755307 | Msa1290780:intron | 30.0% |
| ! | CCTGTGAATCAGAAATTTTT+GGG | - | chr8_3:45755289-45755308 | Msa1290780:intron | 30.0% |
| !!! | GACAGTTTTTTTCTTGTACA+TGG | - | chr8_3:45755430-45755449 | Msa1290780:intron | 30.0% |
| !!! | TTCGACTTTTGAAGTTCTAT+TGG | - | chr8_3:45755620-45755639 | Msa1290780:intron | 30.0% |
| !!! | TCGACTTTTGAAGTTCTATT+GGG | - | chr8_3:45755621-45755640 | Msa1290780:intron | 30.0% |
| ! | TTCCTAATAAGCTTTTGTCT+AGG | - | chr8_3:45755656-45755675 | Msa1290780:intron | 30.0% |
| ! | TCCTAATAAGCTTTTGTCTA+GGG | - | chr8_3:45755657-45755676 | Msa1290780:intron | 30.0% |
| ! | TTCTTAAGTGTAAAGGTGTA+TGG | + | chr8_3:45755768-45755787 | None:intergenic | 30.0% |
| GTTGAAGTTCTTAAGTGTAA+AGG | + | chr8_3:45755775-45755794 | None:intergenic | 30.0% | |
| AGGTATGAGTTTGAACTTAC+CGG | + | chr8_3:45750640-45750659 | None:intergenic | 35.0% | |
| !!! | TTTTGTTGGGGTTGATTTGA+TGG | - | chr8_3:45751247-45751266 | Msa1290780:CDS | 35.0% |
| !! | TTTGTTGGGGTTGATTTGAT+GGG | - | chr8_3:45751248-45751267 | Msa1290780:CDS | 35.0% |
| TTTCAGAAGAAAAAGGTGGT+AGG | - | chr8_3:45751276-45751295 | Msa1290780:CDS | 35.0% | |
| TTCAGAAGAAAAAGGTGGTA+GGG | - | chr8_3:45751277-45751296 | Msa1290780:CDS | 35.0% | |
| AAGTATAATTCCCAGCAAGA+TGG | + | chr8_3:45751486-45751505 | None:intergenic | 35.0% | |
| GTTTGACAACTGTAATGTGT+TGG | - | chr8_3:45751514-45751533 | Msa1290780:CDS | 35.0% | |
| ! | AGGGACACTTTGTATCATTT+TGG | + | chr8_3:45751785-45751804 | None:intergenic | 35.0% |
| ! | GCATGATTAAGTGTTGTTAG+TGG | - | chr8_3:45751867-45751886 | Msa1290780:intron | 35.0% |
| !! | GTTGTTAGTGGTTCACTTTT+TGG | - | chr8_3:45751879-45751898 | Msa1290780:CDS | 35.0% |
| ACTTGGAATCAGCAAAAACA+AGG | + | chr8_3:45751917-45751936 | None:intergenic | 35.0% | |
| TGCTGACAACTAGACAAAAT+TGG | + | chr8_3:45752010-45752029 | None:intergenic | 35.0% | |
| TCCCGTGATATATTATTCGT+AGG | - | chr8_3:45752379-45752398 | Msa1290780:CDS | 35.0% | |
| ! | GCTAATCTTTTAGACTTAGC+TGG | - | chr8_3:45752509-45752528 | Msa1290780:CDS | 35.0% |
| ! | AATCTTTTAGACTTAGCTGG+TGG | - | chr8_3:45752512-45752531 | Msa1290780:CDS | 35.0% |
| TCAAGGTTAGAAATAATCCC+AGG | + | chr8_3:45752593-45752612 | None:intergenic | 35.0% | |
| !! | GGGATTATTTCTAACCTTGA+TGG | - | chr8_3:45752593-45752612 | Msa1290780:CDS | 35.0% |
| TAACATCTGATTCACCATCA+AGG | + | chr8_3:45752610-45752629 | None:intergenic | 35.0% | |
| ! | GAATCAGATGTTAGTTCTTC+TGG | - | chr8_3:45752617-45752636 | Msa1290780:CDS | 35.0% |
| ! | ATGTTAGTTCTTCTGGATGT+CGG | - | chr8_3:45752624-45752643 | Msa1290780:CDS | 35.0% |
| TGCTAAATGGTGTTTCAGTT+GGG | - | chr8_3:45752706-45752725 | Msa1290780:CDS | 35.0% | |
| TGATACTGAGGTAATCTATG+TGG | - | chr8_3:45752772-45752791 | Msa1290780:CDS | 35.0% | |
| GATACTGAGGTAATCTATGT+GGG | - | chr8_3:45752773-45752792 | Msa1290780:CDS | 35.0% | |
| TGAAATTGCTCAGAGATTAC+TGG | - | chr8_3:45752832-45752851 | Msa1290780:CDS | 35.0% | |
| !! | CAAGATAGAACTTTTTCTGC+AGG | + | chr8_3:45752895-45752914 | None:intergenic | 35.0% |
| CTGCAGAAAAAGTTCTATCT+TGG | - | chr8_3:45752893-45752912 | Msa1290780:CDS | 35.0% | |
| AGCATATGGGTAGCATATAA+TGG | + | chr8_3:45752949-45752968 | None:intergenic | 35.0% | |
| ! | ATCCCGATGATGATTTTGTT+TGG | - | chr8_3:45753059-45753078 | Msa1290780:CDS | 35.0% |
| !! | TCCCGATGATGATTTTGTTT+GGG | - | chr8_3:45753060-45753079 | Msa1290780:CDS | 35.0% |
| ACCCAAACAAAATCATCATC+GGG | + | chr8_3:45753064-45753083 | None:intergenic | 35.0% | |
| AAGTAGGCAAAATCATCAAG+TGG | + | chr8_3:45753096-45753115 | None:intergenic | 35.0% | |
| ! | TGATTTTGCCTACTTTCTTG+AGG | - | chr8_3:45753101-45753120 | Msa1290780:CDS | 35.0% |
| AATCGTTTCCTCAAGAAAGT+AGG | + | chr8_3:45753112-45753131 | None:intergenic | 35.0% | |
| CGATTTCATCGAGTTAAACT+TGG | - | chr8_3:45753127-45753146 | Msa1290780:CDS | 35.0% | |
| ! | TCCCATCATCTGAAATTTAC+CGG | - | chr8_3:45753170-45753189 | Msa1290780:CDS | 35.0% |
| TCCGGTAAATTTCAGATGAT+GGG | + | chr8_3:45753174-45753193 | None:intergenic | 35.0% | |
| TTGAGAATTTCATCCCTTAC+TGG | + | chr8_3:45753202-45753221 | None:intergenic | 35.0% | |
| GTAAGGGATGAAATTCTCAA+AGG | - | chr8_3:45753202-45753221 | Msa1290780:CDS | 35.0% | |
| ! | TTTAGCTTAGAGGATGTAGA+AGG | + | chr8_3:45753427-45753446 | None:intergenic | 35.0% |
| !!! | CTGAATCTCTTTTAGCTTAG+AGG | + | chr8_3:45753437-45753456 | None:intergenic | 35.0% |
| CTCTAAGCTAAAAGAGATTC+AGG | - | chr8_3:45753435-45753454 | Msa1290780:CDS | 35.0% | |
| !! | GGACGACATGGATATTTTTA+AGG | - | chr8_3:45753492-45753511 | Msa1290780:CDS | 35.0% |
| !! | CAATCTGAAATTTCTAGCTG+TGG | - | chr8_3:45753519-45753538 | Msa1290780:CDS | 35.0% |
| AATAAGCACTCTTCTCGAAA+CGG | + | chr8_3:45753735-45753754 | None:intergenic | 35.0% | |
| CATATCGATAGTGTTTCTCA+TGG | + | chr8_3:45754035-45754054 | None:intergenic | 35.0% | |
| TACTCATGATGTGGCATATT+GGG | - | chr8_3:45754059-45754078 | Msa1290780:intron | 35.0% | |
| !! | CATTATACTAAAAGGTGCTG+GGG | - | chr8_3:45754123-45754142 | Msa1290780:intron | 35.0% |
| TGCTGATACAATATGGTCAA+TGG | + | chr8_3:45754208-45754227 | None:intergenic | 35.0% | |
| GCCATCTTTCTTGATTATGA+TGG | - | chr8_3:45754249-45754268 | Msa1290780:intron | 35.0% | |
| GCCATCATAATCAAGAAAGA+TGG | + | chr8_3:45754253-45754272 | None:intergenic | 35.0% | |
| TAAGCACAGATATGACTTCA+GGG | + | chr8_3:45754314-45754333 | None:intergenic | 35.0% | |
| TTAAGCACAGATATGACTTC+AGG | + | chr8_3:45754315-45754334 | None:intergenic | 35.0% | |
| CAAGAGATTCTCTGAATGAA+TGG | - | chr8_3:45754385-45754404 | Msa1290780:intron | 35.0% | |
| TTTACATCATGCAAACTGCT+GGG | - | chr8_3:45754408-45754427 | Msa1290780:intron | 35.0% | |
| GGAAACAAGTCATTTGTTTG+CGG | - | chr8_3:45754568-45754587 | Msa1290780:intron | 35.0% | |
| ATTTGTTTGCGGATCTTGAT+TGG | - | chr8_3:45754579-45754598 | Msa1290780:intron | 35.0% | |
| GAACCAGCAATTGTTAAAAG+AGG | - | chr8_3:45754770-45754789 | Msa1290780:intron | 35.0% | |
| GCTTAACTTCAACAATATGC+TGG | + | chr8_3:45754796-45754815 | None:intergenic | 35.0% | |
| TATTGTTGAAGTTAAGCCAC+AGG | - | chr8_3:45754799-45754818 | Msa1290780:intron | 35.0% | |
| ! | CTTACTAGTTTCACTGTTAG+AGG | + | chr8_3:45754856-45754875 | None:intergenic | 35.0% |
| TGAGAAGGTTCTCTTGAATA+TGG | - | chr8_3:45754941-45754960 | Msa1290780:intron | 35.0% | |
| CTCTTGAATATGGTTAATGC+CGG | - | chr8_3:45754951-45754970 | Msa1290780:intron | 35.0% | |
| GATGTTGTAAAGTTGCTTGA+TGG | - | chr8_3:45755146-45755165 | Msa1290780:intron | 35.0% | |
| !!! | TTTGGGCTTTTGATTTGTTG+AGG | + | chr8_3:45755180-45755199 | None:intergenic | 35.0% |
| CTCAAAAGAAACCTGGAATT+GGG | + | chr8_3:45755210-45755229 | None:intergenic | 35.0% | |
| TCTCAAAAGAAACCTGGAAT+TGG | + | chr8_3:45755211-45755230 | None:intergenic | 35.0% | |
| !! | TTTTGAGAGCACAGTTTCTT+AGG | - | chr8_3:45755223-45755242 | Msa1290780:intron | 35.0% |
| CCCAAAAATTTCTGATTCAC+AGG | + | chr8_3:45755292-45755311 | None:intergenic | 35.0% | |
| !!! | CGACTTTTGAAGTTCTATTG+GGG | - | chr8_3:45755622-45755641 | Msa1290780:intron | 35.0% |
| ACCCTAGACAAAAGCTTATT+AGG | + | chr8_3:45755661-45755680 | None:intergenic | 35.0% | |
| !! | AATACTAACTCTAAGACGCG+TGG | + | chr8_3:45752082-45752101 | None:intergenic | 40.0% |
| TGATATGAAGAAGTGACGAC+AGG | + | chr8_3:45752114-45752133 | None:intergenic | 40.0% | |
| TTTCATCTATCATCACGTCC+TGG | - | chr8_3:45752140-45752159 | Msa1290780:CDS | 40.0% | |
| TTCAGGGATATTCACTAGCT+TGG | + | chr8_3:45752265-45752284 | None:intergenic | 40.0% | |
| GGTATGAGCAAATACATGCA+TGG | + | chr8_3:45752324-45752343 | None:intergenic | 40.0% | |
| TAACCCTTGGAAGACTTCTT+GGG | + | chr8_3:45752562-45752581 | None:intergenic | 40.0% | |
| ATAACCCTTGGAAGACTTCT+TGG | + | chr8_3:45752563-45752582 | None:intergenic | 40.0% | |
| ! | TGTTAGTTCTTCTGGATGTC+GGG | - | chr8_3:45752625-45752644 | Msa1290780:CDS | 40.0% |
| ! | ATATCTCTTTTAGCCTGCAG+CGG | + | chr8_3:45752680-45752699 | None:intergenic | 40.0% |
| CTGCTAAATGGTGTTTCAGT+TGG | - | chr8_3:45752705-45752724 | Msa1290780:CDS | 40.0% | |
| ACTGGATGACTTTAATTGCG+TGG | - | chr8_3:45752850-45752869 | Msa1290780:CDS | 40.0% | |
| !! | AACTTTTTCTGCAGGTCATG+GGG | + | chr8_3:45752887-45752906 | None:intergenic | 40.0% |
| !! | GAACTTTTTCTGCAGGTCAT+GGG | + | chr8_3:45752888-45752907 | None:intergenic | 40.0% |
| !! | AGAACTTTTTCTGCAGGTCA+TGG | + | chr8_3:45752889-45752908 | None:intergenic | 40.0% |
| ! | GGTAGCATATAATGGAAGAG+AGG | + | chr8_3:45752941-45752960 | None:intergenic | 40.0% |
| TCACCATGATCTGAGCATAT+GGG | + | chr8_3:45752962-45752981 | None:intergenic | 40.0% | |
| ATCACCATGATCTGAGCATA+TGG | + | chr8_3:45752963-45752982 | None:intergenic | 40.0% | |
| ! | ATGATGGGAAAGGACTATGA+AGG | + | chr8_3:45753159-45753178 | None:intergenic | 40.0% |
| GTCCGGTAAATTTCAGATGA+TGG | + | chr8_3:45753175-45753194 | None:intergenic | 40.0% | |
| CAACTTCACCCTGCAAATTT+GGG | + | chr8_3:45753564-45753583 | None:intergenic | 40.0% | |
| ACAACTTCACCCTGCAAATT+TGG | + | chr8_3:45753565-45753584 | None:intergenic | 40.0% | |
| ATAAGCACTCTTCTCGAAAC+GGG | + | chr8_3:45753734-45753753 | None:intergenic | 40.0% | |
| TTGCATCGTCAATGCTGTAA+GGG | - | chr8_3:45753771-45753790 | Msa1290780:CDS | 40.0% | |
| ! | CTTGTTGTGTCTGAGTTCAT+TGG | - | chr8_3:45753898-45753917 | Msa1290780:intron | 40.0% |
| GTACTCATGATGTGGCATAT+TGG | - | chr8_3:45754058-45754077 | Msa1290780:intron | 40.0% | |
| !! | ACGCAGTTTTATGCAGGATT+TGG | - | chr8_3:45754083-45754102 | Msa1290780:intron | 40.0% |
| TCGTGTTCATTGTTAGTGGA+AGG | - | chr8_3:45754361-45754380 | Msa1290780:intron | 40.0% | |
| CGTGTTCATTGTTAGTGGAA+GGG | - | chr8_3:45754362-45754381 | Msa1290780:intron | 40.0% | |
| GTTTACATCATGCAAACTGC+TGG | - | chr8_3:45754407-45754426 | Msa1290780:intron | 40.0% | |
| TCGTATACAGAAGCAACTGA+TGG | - | chr8_3:45754629-45754648 | Msa1290780:intron | 40.0% | |
| !! | TGAAGTCAAGGAAAGTGCTT+TGG | - | chr8_3:45754661-45754680 | Msa1290780:intron | 40.0% |
| TAGCAAGAACACTTTCCAAG+TGG | + | chr8_3:45754748-45754767 | None:intergenic | 40.0% | |
| ! | TGGCCTCTTTTAACAATTGC+TGG | + | chr8_3:45754776-45754795 | None:intergenic | 40.0% |
| TCTTTACAGGGAGTAACCAA+AGG | - | chr8_3:45754909-45754928 | Msa1290780:intron | 40.0% | |
| TGATGTGCATTGGAGATGAT+AGG | - | chr8_3:45754991-45755010 | Msa1290780:intron | 40.0% | |
| TACCGTGCAAGCAAAAATCT+CGG | + | chr8_3:45755081-45755100 | None:intergenic | 40.0% | |
| !! | TTTGATTTGTTGAGGTAGCG+AGG | + | chr8_3:45755172-45755191 | None:intergenic | 40.0% |
| TGGAATTGGGCAAGATGTTT+GGG | + | chr8_3:45755197-45755216 | None:intergenic | 40.0% | |
| AACGAACCAACAATGCTGTT+TGG | + | chr8_3:45755253-45755272 | None:intergenic | 40.0% | |
| !! | ATTGTTGGTTCGTTATGCGA+GGG | - | chr8_3:45755259-45755278 | Msa1290780:intron | 40.0% |
| ACAAAATCGCACTATTCGTC+AGG | + | chr8_3:45755328-45755347 | None:intergenic | 40.0% | |
| ! | GACGAATAGTGCGATTTTGT+TGG | - | chr8_3:45755328-45755347 | Msa1290780:intron | 40.0% |
| ! | ATAGTGCGATTTTGTTGGTG+TGG | - | chr8_3:45755333-45755352 | Msa1290780:intron | 40.0% |
| GTGTGGATCAGATTCTTTCT+GGG | - | chr8_3:45755350-45755369 | Msa1290780:intron | 40.0% | |
| AGTACAAGCAACGATCAATC+AGG | + | chr8_3:45755519-45755538 | None:intergenic | 40.0% | |
| !! | GTGCAGCAAGATCTACTTTT+TGG | + | chr8_3:45755688-45755707 | None:intergenic | 40.0% |
| GAGAGAGAGAGAGAGAAGAA+TGG | + | chr8_3:45750532-45750551 | None:intergenic | 45.0% | |
| GAAAAGTGGTGAGTGAAGAG+AGG | + | chr8_3:45750660-45750679 | None:intergenic | 45.0% | |
| ACTGTCGAACAAATAGCACC+AGG | + | chr8_3:45752161-45752180 | None:intergenic | 45.0% | |
| AACCCTTGGAAGACTTCTTG+GGG | + | chr8_3:45752561-45752580 | None:intergenic | 45.0% | |
| CAAGGGTTATGACTGTTCCT+GGG | - | chr8_3:45752573-45752592 | Msa1290780:CDS | 45.0% | |
| ATGGTGTTTCAGTTGGGATG+AGG | - | chr8_3:45752712-45752731 | Msa1290780:CDS | 45.0% | |
| ! | CGGGTTTTCTTCTGATACTG+AGG | - | chr8_3:45752760-45752779 | Msa1290780:CDS | 45.0% |
| AATCTATGTGGGTTCGCTCA+AGG | - | chr8_3:45752784-45752803 | Msa1290780:CDS | 45.0% | |
| TGAGATAGATGCTAGTGAGC+AGG | - | chr8_3:45752808-45752827 | Msa1290780:CDS | 45.0% | |
| ! | GTTTTTGTAAGCAGCAGCTC+TGG | - | chr8_3:45752915-45752934 | Msa1290780:CDS | 45.0% |
| CTACCCATATGCTCAGATCA+TGG | - | chr8_3:45752956-45752975 | Msa1290780:CDS | 45.0% | |
| TTTACCGGACTTTGCCAGTA+AGG | - | chr8_3:45753185-45753204 | Msa1290780:CDS | 45.0% | |
| TTACCGGACTTTGCCAGTAA+GGG | - | chr8_3:45753186-45753205 | Msa1290780:CDS | 45.0% | |
| TCTTGCTGCAGTAGAATGCT+AGG | - | chr8_3:45753283-45753302 | Msa1290780:CDS | 45.0% | |
| CTGGACTATGAATCTAAGCG+CGG | - | chr8_3:45753307-45753326 | Msa1290780:CDS | 45.0% | |
| GAATCTAAGCGCGGACATAT+AGG | - | chr8_3:45753316-45753335 | Msa1290780:CDS | 45.0% | |
| TTTGCCGGTAGGAATTCACA+TGG | - | chr8_3:45753375-45753394 | Msa1290780:CDS | 45.0% | |
| TTGCCGGTAGGAATTCACAT+GGG | - | chr8_3:45753376-45753395 | Msa1290780:CDS | 45.0% | |
| CTACCCATGTGAATTCCTAC+CGG | + | chr8_3:45753382-45753401 | None:intergenic | 45.0% | |
| ! | TATTCTTGGTGTGGACGACA+TGG | - | chr8_3:45753480-45753499 | Msa1290780:CDS | 45.0% |
| CAGCAGAACCCAAATTTGCA+GGG | - | chr8_3:45753553-45753572 | Msa1290780:CDS | 45.0% | |
| ATAAATCCTGCAAGGGGTTC+AGG | - | chr8_3:45753598-45753617 | Msa1290780:CDS | 45.0% | |
| TAAATCCTGCAAGGGGTTCA+GGG | - | chr8_3:45753599-45753618 | Msa1290780:CDS | 45.0% | |
| ! | GAGCGGTCAATGATAATGAC+TGG | + | chr8_3:45753706-45753725 | None:intergenic | 45.0% |
| TAAGCACTCTTCTCGAAACG+GGG | + | chr8_3:45753733-45753752 | None:intergenic | 45.0% | |
| GTTGCATCGTCAATGCTGTA+AGG | - | chr8_3:45753770-45753789 | Msa1290780:CDS | 45.0% | |
| ATCGTCAATGCTGTAAGGGA+TGG | - | chr8_3:45753775-45753794 | Msa1290780:CDS | 45.0% | |
| TCGTCAATGCTGTAAGGGAT+GGG | - | chr8_3:45753776-45753795 | Msa1290780:CDS | 45.0% | |
| ACAACAAGCATGCTTGTACG+AGG | + | chr8_3:45753886-45753905 | None:intergenic | 45.0% | |
| GTTGTTCACCTTCTCTGAGT+GGG | - | chr8_3:45753920-45753939 | Msa1290780:intron | 45.0% | |
| TTGTTCACCTTCTCTGAGTG+GGG | - | chr8_3:45753921-45753940 | Msa1290780:intron | 45.0% | |
| GCAACTGCATCTATATCCCA+GGG | + | chr8_3:45753961-45753980 | None:intergenic | 45.0% | |
| AGCAACTGCATCTATATCCC+AGG | + | chr8_3:45753962-45753981 | None:intergenic | 45.0% | |
| !! | ACTAAAAGGTGCTGGGGAAT+TGG | - | chr8_3:45754129-45754148 | Msa1290780:intron | 45.0% |
| ACAGATATGACTTCAGGGCT+GGG | + | chr8_3:45754309-45754328 | None:intergenic | 45.0% | |
| GACTGAGGAGGAAGAAACAA+AGG | + | chr8_3:45754472-45754491 | None:intergenic | 45.0% | |
| GTGGAATAGCGACTCTGAAT+GGG | - | chr8_3:45754547-45754566 | Msa1290780:intron | 45.0% | |
| TGCGGATCTTGATTGGAAAC+AGG | - | chr8_3:45754586-45754605 | Msa1290780:intron | 45.0% | |
| GGATCTTGATTGGAAACAGG+TGG | - | chr8_3:45754589-45754608 | Msa1290780:intron | 45.0% | |
| TCTGTATACGACTGCATGAC+AGG | + | chr8_3:45754620-45754639 | None:intergenic | 45.0% | |
| !! | TCAAGGAAAGTGCTTTGGTG+TGG | - | chr8_3:45754666-45754685 | Msa1290780:intron | 45.0% |
| ! | CAAGATGCAGACCCTGATTT+TGG | - | chr8_3:45754695-45754714 | Msa1290780:intron | 45.0% |
| CAAGTGGTCCAGCAATTCTT+TGG | + | chr8_3:45754732-45754751 | None:intergenic | 45.0% | |
| CAAAGAATTGCTGGACCACT+TGG | - | chr8_3:45754730-45754749 | Msa1290780:intron | 45.0% | |
| ACAGGGAGTAACCAAAGGTT+TGG | - | chr8_3:45754914-45754933 | Msa1290780:intron | 45.0% | |
| CTTCTCAGCTACCAAACCTT+TGG | + | chr8_3:45754928-45754947 | None:intergenic | 45.0% | |
| ! | CAAAGGTTTGGTAGCTGAGA+AGG | - | chr8_3:45754926-45754945 | Msa1290780:intron | 45.0% |
| !! | CACGAAATCTGGTGGATTAC+CGG | + | chr8_3:45754973-45754992 | None:intergenic | 45.0% |
| ATGCACATCACGAAATCTGG+TGG | + | chr8_3:45754981-45755000 | None:intergenic | 45.0% | |
| CCAATGCACATCACGAAATC+TGG | + | chr8_3:45754984-45755003 | None:intergenic | 45.0% | |
| CCAGATTTCGTGATGTGCAT+TGG | - | chr8_3:45754981-45755000 | Msa1290780:intron | 45.0% | |
| ! | TCCCGAGATTTTTGCTTGCA+CGG | - | chr8_3:45755076-45755095 | Msa1290780:intron | 45.0% |
| ACCGTGCAAGCAAAAATCTC+GGG | + | chr8_3:45755080-45755099 | None:intergenic | 45.0% | |
| ! | GAGATTTTTGCTTGCACGGT+AGG | - | chr8_3:45755080-45755099 | Msa1290780:intron | 45.0% |
| ! | TTTTTGCTTGCACGGTAGGT+AGG | - | chr8_3:45755084-45755103 | Msa1290780:intron | 45.0% |
| CTGGAATTGGGCAAGATGTT+TGG | + | chr8_3:45755198-45755217 | None:intergenic | 45.0% | |
| CAAACATCTTGCCCAATTCC+AGG | - | chr8_3:45755196-45755215 | Msa1290780:intron | 45.0% | |
| CTGTGCTCTCAAAAGAAACC+TGG | + | chr8_3:45755217-45755236 | None:intergenic | 45.0% | |
| !! | CATTGTTGGTTCGTTATGCG+AGG | - | chr8_3:45755258-45755277 | Msa1290780:intron | 45.0% |
| GGTGTGGATCAGATTCTTTC+TGG | - | chr8_3:45755349-45755368 | Msa1290780:intron | 45.0% | |
| TTCTTTCTGGGCTCCTGAAT+CGG | - | chr8_3:45755362-45755381 | Msa1290780:intron | 45.0% | |
| ACTGGTGCTTCATTGAGCAT+CGG | - | chr8_3:45755473-45755492 | Msa1290780:intron | 45.0% | |
| !! | ATATAGTAAATAAAATTATT+GGG | + | chr8_3:45751033-45751052 | None:intergenic | 5.0% |
| !! | AATATAGTAAATAAAATTAT+TGG | + | chr8_3:45751034-45751053 | None:intergenic | 5.0% |
| GAGTTTGAACTTACCGGCGA+CGG | + | chr8_3:45750634-45750653 | None:intergenic | 50.0% | |
| GAAGTGACGACAGGTCAACT+AGG | + | chr8_3:45752105-45752124 | None:intergenic | 50.0% | |
| ACACCCCAAGAAGTCTTCCA+AGG | - | chr8_3:45752555-45752574 | Msa1290780:CDS | 50.0% | |
| CACCCCAAGAAGTCTTCCAA+GGG | - | chr8_3:45752556-45752575 | Msa1290780:CDS | 50.0% | |
| CCAGGAACAGTCATAACCCT+TGG | + | chr8_3:45752575-45752594 | None:intergenic | 50.0% | |
| CCAAGGGTTATGACTGTTCC+TGG | - | chr8_3:45752572-45752591 | Msa1290780:CDS | 50.0% | |
| TCGGGAGCGGAAAATCATTG+TGG | - | chr8_3:45752643-45752662 | Msa1290780:CDS | 50.0% | |
| ATCGCTTTGACCGAGTGCTT+TGG | - | chr8_3:45752981-45753000 | Msa1290780:CDS | 50.0% | |
| ! | CATAAGCCTGCCAAAGCACT+CGG | + | chr8_3:45752994-45753013 | None:intergenic | 50.0% |
| CATCCCTTACTGGCAAAGTC+CGG | + | chr8_3:45753192-45753211 | None:intergenic | 50.0% | |
| CTGCAGTAGAATGCTAGGTC+TGG | - | chr8_3:45753288-45753307 | Msa1290780:CDS | 50.0% | |
| CGGTAGGAATTCACATGGGT+AGG | - | chr8_3:45753380-45753399 | Msa1290780:CDS | 50.0% | |
| GCAGCAGAACCCAAATTTGC+AGG | - | chr8_3:45753552-45753571 | Msa1290780:CDS | 50.0% | |
| TGCAAAGCTGGATGAAGCTG+TGG | - | chr8_3:45753843-45753862 | Msa1290780:five_prime_UTR | 50.0% | |
| GCAAAGCTGGATGAAGCTGT+GGG | - | chr8_3:45753844-45753863 | Msa1290780:five_prime_UTR | 50.0% | |
| GGTTGTTCACCTTCTCTGAG+TGG | - | chr8_3:45753919-45753938 | Msa1290780:intron | 50.0% | |
| !! | TTGGGCACGCAGTTTTATGC+AGG | - | chr8_3:45754077-45754096 | Msa1290780:intron | 50.0% |
| AGATATGACTTCAGGGCTGG+GGG | + | chr8_3:45754307-45754326 | None:intergenic | 50.0% | |
| CAGATATGACTTCAGGGCTG+GGG | + | chr8_3:45754308-45754327 | None:intergenic | 50.0% | |
| CACAGATATGACTTCAGGGC+TGG | + | chr8_3:45754310-45754329 | None:intergenic | 50.0% | |
| ! | TTCTTTTGGTGGGGTGACTG+AGG | + | chr8_3:45754487-45754506 | None:intergenic | 50.0% |
| GGTGGAATAGCGACTCTGAA+TGG | - | chr8_3:45754546-45754565 | Msa1290780:intron | 50.0% | |
| CTTGGCAGGAGCCAAAATCA+GGG | + | chr8_3:45754709-45754728 | None:intergenic | 50.0% | |
| !! | CAGCAATTCTTTGGCTTGGC+AGG | + | chr8_3:45754723-45754742 | None:intergenic | 50.0% |
| CTGCCAAGCCAAAGAATTGC+TGG | - | chr8_3:45754721-45754740 | Msa1290780:intron | 50.0% | |
| GGTCCAGCAATTCTTTGGCT+TGG | + | chr8_3:45754727-45754746 | None:intergenic | 50.0% | |
| GCAAAAATCTCGGGAGCTGA+TGG | + | chr8_3:45755071-45755090 | None:intergenic | 50.0% | |
| ! | GAGAGCACAGTTTCTTAGGC+AGG | - | chr8_3:45755227-45755246 | Msa1290780:intron | 50.0% |
| ! | GATGCCATGCAAACCGATTC+AGG | + | chr8_3:45755378-45755397 | None:intergenic | 50.0% |
| !! | GAATCGGTTTGCATGGCATC+AGG | - | chr8_3:45755378-45755397 | Msa1290780:intron | 50.0% |
| CACTACGCGTTTCACCTCAC+CGG | - | chr8_3:45750589-45750608 | Msa1290780:three_prime_UTR | 55.0% | |
| GAACTTACCGGCGACGGTAA+CGG | + | chr8_3:45750628-45750647 | None:intergenic | 55.0% | |
| GGAAGACTTCTTGGGGTGTG+AGG | + | chr8_3:45752554-45752573 | None:intergenic | 55.0% | |
| GTTCTTCTGGATGTCGGGAG+CGG | - | chr8_3:45752630-45752649 | Msa1290780:CDS | 55.0% | |
| CAGGTCATGGGGTAGAAAGG+TGG | + | chr8_3:45752876-45752895 | None:intergenic | 55.0% | |
| CTGCAGGTCATGGGGTAGAA+AGG | + | chr8_3:45752879-45752898 | None:intergenic | 55.0% | |
| CTTTGACCGAGTGCTTTGGC+AGG | - | chr8_3:45752985-45753004 | Msa1290780:CDS | 55.0% | |
| GGGTTCAGGGAAGGATGTTC+AGG | - | chr8_3:45753612-45753631 | Msa1290780:CDS | 55.0% | |
| TCTCGAAACGGGGAACAGAG+CGG | + | chr8_3:45753723-45753742 | None:intergenic | 55.0% | |
| CAGACAGGGAACTGCAAAGC+TGG | - | chr8_3:45753831-45753850 | Msa1290780:exon | 55.0% | |
| TTCTCTGAGTGGGGCCATCA+GGG | - | chr8_3:45753930-45753949 | Msa1290780:intron | 55.0% | |
| ATCCCAGGGATTGACCCTGA+TGG | + | chr8_3:45753947-45753966 | None:intergenic | 55.0% | |
| !! | AAGGTGCTGGGGAATTGGTC+TGG | - | chr8_3:45754134-45754153 | Msa1290780:intron | 55.0% |
| !! | AGGTGCTGGGGAATTGGTCT+GGG | - | chr8_3:45754135-45754154 | Msa1290780:intron | 55.0% |
| ! | TGGGGAATTGGTCTGGGCTT+GGG | - | chr8_3:45754141-45754160 | Msa1290780:intron | 55.0% |
| CTGGGACTTGCAGCTGAACA+TGG | - | chr8_3:45754426-45754445 | Msa1290780:intron | 55.0% | |
| ! | TTTTGGTGGGGTGACTGAGG+AGG | + | chr8_3:45754484-45754503 | None:intergenic | 55.0% |
| GCTTGGCAGGAGCCAAAATC+AGG | + | chr8_3:45754710-45754729 | None:intergenic | 55.0% | |
| ! | TCGGGAGCTGATGGTAACGA+CGG | + | chr8_3:45755062-45755081 | None:intergenic | 55.0% |
| GGTAGGTAGGAAGCCTAGCA+AGG | - | chr8_3:45755097-45755116 | Msa1290780:intron | 55.0% | |
| GGCAGGCCAAACAGCATTGT+TGG | - | chr8_3:45755244-45755263 | Msa1290780:intron | 55.0% | |
| !! | GGCTCCTGAATCGGTTTGCA+TGG | - | chr8_3:45755371-45755390 | Msa1290780:intron | 55.0% |
| CGGTTTGCATGGCATCAGGA+AGG | - | chr8_3:45755382-45755401 | Msa1290780:intron | 55.0% | |
| GCATCAGGAAGGTTGACGTG+TGG | - | chr8_3:45755393-45755412 | Msa1290780:intron | 55.0% | |
| GAAGGTTGACGTGTGGTTCG+AGG | - | chr8_3:45755400-45755419 | Msa1290780:intron | 55.0% | |
| TAACGGCGACGGCGAAGTTC+CGG | + | chr8_3:45750611-45750630 | None:intergenic | 60.0% | |
| GGCAAACATGTTGCCGCTGC+AGG | - | chr8_3:45752664-45752683 | Msa1290780:CDS | 60.0% | |
| TCCTGCAAGGGGTTCAGGGA+AGG | - | chr8_3:45753603-45753622 | Msa1290780:CDS | 60.0% | |
| TCCTTCCCTGAACCCCTTGC+AGG | + | chr8_3:45753607-45753626 | None:intergenic | 60.0% | |
| CTGATGGCCCCACTCAGAGA+AGG | + | chr8_3:45753931-45753950 | None:intergenic | 60.0% | |
| CTTCTCTGAGTGGGGCCATC+AGG | - | chr8_3:45753929-45753948 | Msa1290780:intron | 60.0% | |
| GGCCATCAGGGTCAATCCCT+GGG | - | chr8_3:45753942-45753961 | Msa1290780:intron | 60.0% | |
| ! | CTGGGGAATTGGTCTGGGCT+TGG | - | chr8_3:45754140-45754159 | Msa1290780:intron | 60.0% |
| ! | GGGGAATTGGTCTGGGCTTG+GGG | - | chr8_3:45754142-45754161 | Msa1290780:intron | 60.0% |
| ! | CGGGAGCTGATGGTAACGAC+GGG | + | chr8_3:45755061-45755080 | None:intergenic | 60.0% |
| GGGCCATCAGGGTCAATCCC+TGG | - | chr8_3:45753941-45753960 | Msa1290780:intron | 65.0% | |
| GCGACGGCGAAGTTCCGGTG+AGG | + | chr8_3:45750606-45750625 | None:intergenic | 70.0% | |
| ! | ACCGGCGACGGTAACGGCGA+CGG | + | chr8_3:45750622-45750641 | None:intergenic | 70.0% |
| GCCGTCGCCGTTACCGTCGC+CGG | - | chr8_3:45750618-45750637 | Msa1290780:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 45750504 | 45755828 | 45750504 | ID=Msa1290780;Name=Msa1290780 |
| chr8_3 | mRNA | 45750504 | 45755828 | 45750504 | ID=Msa1290780-mRNA-1;Parent=Msa1290780;Name=Msa1290780-mRNA-1;_AED=0.01;_eAED=0.01;_QI=171|1|1|1|0.66|0.5|4|584|856 |
| chr8_3 | exon | 45750504 | 45751414 | 45750504 | ID=Msa1290780-mRNA-1:exon:12655;Parent=Msa1290780-mRNA-1 |
| chr8_3 | exon | 45751512 | 45751785 | 45751512 | ID=Msa1290780-mRNA-1:exon:12654;Parent=Msa1290780-mRNA-1 |
| chr8_3 | exon | 45751872 | 45753876 | 45751872 | ID=Msa1290780-mRNA-1:exon:12653;Parent=Msa1290780-mRNA-1 |
| chr8_3 | exon | 45755693 | 45755828 | 45755693 | ID=Msa1290780-mRNA-1:exon:12652;Parent=Msa1290780-mRNA-1 |
| chr8_3 | five_prime_UTR | 45755693 | 45755828 | 45755693 | ID=Msa1290780-mRNA-1:five_prime_utr;Parent=Msa1290780-mRNA-1 |
| chr8_3 | five_prime_UTR | 45753842 | 45753876 | 45753842 | ID=Msa1290780-mRNA-1:five_prime_utr;Parent=Msa1290780-mRNA-1 |
| chr8_3 | CDS | 45751872 | 45753841 | 45751872 | ID=Msa1290780-mRNA-1:cds;Parent=Msa1290780-mRNA-1 |
| chr8_3 | CDS | 45751512 | 45751785 | 45751512 | ID=Msa1290780-mRNA-1:cds;Parent=Msa1290780-mRNA-1 |
| chr8_3 | CDS | 45751088 | 45751414 | 45751088 | ID=Msa1290780-mRNA-1:cds;Parent=Msa1290780-mRNA-1 |
| chr8_3 | three_prime_UTR | 45750504 | 45751087 | 45750504 | ID=Msa1290780-mRNA-1:three_prime_utr;Parent=Msa1290780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
