Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196670 | XP_013462834.1 | 99.153 | 118 | 1 | 0 | 1 | 118 | 1 | 118 | 2.78e-80 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196670 | sp|M1C146|ATG8C_SOLTU | 85.593 | 118 | 17 | 0 | 1 | 118 | 1 | 118 | 1.23e-73 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196670 | I3S7J4 | 99.153 | 118 | 1 | 0 | 1 | 118 | 1 | 118 | 1.33e-80 | 241 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0196670 | 0.818900 | 1.539600e-52 | -8.615850e-47 |
| Msa0004840 | Msa0196670 | 0.801607 | 8.314099e-49 | -8.615850e-47 |
| Msa0005270 | Msa0196670 | 0.804752 | 1.857272e-49 | -8.615850e-47 |
| Msa0009340 | Msa0196670 | 0.800115 | 1.676632e-48 | -8.615850e-47 |
| Msa0010490 | Msa0196670 | 0.804954 | 1.685807e-49 | -8.615850e-47 |
| Msa0015090 | Msa0196670 | 0.857713 | 1.353275e-62 | -8.615850e-47 |
| Msa0016510 | Msa0196670 | 0.825298 | 5.058518e-54 | -8.615850e-47 |
| Msa0017320 | Msa0196670 | 0.828890 | 6.991120e-55 | -8.615850e-47 |
| Msa0020390 | Msa0196670 | 0.835768 | 1.384198e-56 | -8.615850e-47 |
| Msa0020410 | Msa0196670 | 0.855208 | 7.361334e-62 | -8.615850e-47 |
| Msa0023480 | Msa0196670 | 0.811778 | 5.906507e-51 | -8.615850e-47 |
| Msa0027890 | Msa0196670 | 0.806822 | 6.824400e-50 | -8.615850e-47 |
| Msa0032080 | Msa0196670 | 0.833745 | 4.469140e-56 | -8.615850e-47 |
| Msa0032470 | Msa0196670 | 0.816233 | 6.147016e-52 | -8.615850e-47 |
| Msa0037320 | Msa0196670 | 0.806632 | 7.486688e-50 | -8.615850e-47 |
| Msa0038870 | Msa0196670 | 0.820866 | 5.468836e-53 | -8.615850e-47 |
| Msa0043980 | Msa0196670 | 0.848573 | 5.623816e-60 | -8.615850e-47 |
| Msa0049750 | Msa0196670 | 0.851475 | 8.664907e-61 | -8.615850e-47 |
| Msa0051210 | Msa0196670 | 0.840030 | 1.111247e-57 | -8.615850e-47 |
| Msa0051450 | Msa0196670 | 0.847375 | 1.203036e-59 | -8.615850e-47 |
| Msa0051750 | Msa0196670 | 0.801848 | 7.417499e-49 | -8.615850e-47 |
| Msa0055580 | Msa0196670 | 0.800908 | 1.155959e-48 | -8.615850e-47 |
| Msa0055640 | Msa0196670 | 0.843456 | 1.385938e-58 | -8.615850e-47 |
| Msa0062490 | Msa0196670 | 0.808874 | 2.499683e-50 | -8.615850e-47 |
| Msa0065650 | Msa0196670 | 0.810461 | 1.139739e-50 | -8.615850e-47 |
| Msa0071250 | Msa0196670 | 0.802492 | 5.468261e-49 | -8.615850e-47 |
| Msa0077380 | Msa0196670 | 0.807106 | 5.943587e-50 | -8.615850e-47 |
| Msa0081650 | Msa0196670 | 0.819219 | 1.302939e-52 | -8.615850e-47 |
| Msa0082420 | Msa0196670 | 0.823071 | 1.686809e-53 | -8.615850e-47 |
| Msa0083280 | Msa0196670 | 0.804865 | 1.759620e-49 | -8.615850e-47 |
| Msa0086420 | Msa0196670 | 0.830482 | 2.864630e-55 | -8.615850e-47 |
| Msa0090550 | Msa0196670 | 0.843432 | 1.406482e-58 | -8.615850e-47 |
| Msa0090970 | Msa0196670 | 0.803929 | 2.757256e-49 | -8.615850e-47 |
| Msa0095360 | Msa0196670 | 0.808241 | 3.410967e-50 | -8.615850e-47 |
| Msa0095770 | Msa0196670 | 0.812172 | 4.845696e-51 | -8.615850e-47 |
| Msa0096700 | Msa0196670 | 0.812814 | 3.507255e-51 | -8.615850e-47 |
| Msa0098990 | Msa0196670 | 0.809831 | 1.557948e-50 | -8.615850e-47 |
| Msa0101830 | Msa0196670 | 0.845138 | 4.894330e-59 | -8.615850e-47 |
| Msa0104230 | Msa0196670 | 0.804794 | 1.820344e-49 | -8.615850e-47 |
| Msa0104800 | Msa0196670 | 0.809939 | 1.476276e-50 | -8.615850e-47 |
| Msa0106850 | Msa0196670 | 0.817641 | 2.968343e-52 | -8.615850e-47 |
| Msa0111080 | Msa0196670 | 0.811261 | 7.650210e-51 | -8.615850e-47 |
| Msa0117520 | Msa0196670 | 0.821992 | 3.005478e-53 | -8.615850e-47 |
| Msa0118540 | Msa0196670 | 0.831512 | 1.600341e-55 | -8.615850e-47 |
| Msa0127870 | Msa0196670 | 0.800324 | 1.520551e-48 | -8.615850e-47 |
| Msa0138020 | Msa0196670 | 0.868844 | 4.826790e-66 | -8.615850e-47 |
| Msa0142500 | Msa0196670 | 0.808581 | 2.886995e-50 | -8.615850e-47 |
| Msa0143930 | Msa0196670 | 0.814780 | 1.293840e-51 | -8.615850e-47 |
| Msa0144530 | Msa0196670 | 0.813213 | 2.867623e-51 | -8.615850e-47 |
| Msa0152560 | Msa0196670 | 0.811344 | 7.338957e-51 | -8.615850e-47 |
| Msa0154920 | Msa0196670 | 0.809711 | 1.653039e-50 | -8.615850e-47 |
| Msa0159420 | Msa0196670 | 0.802527 | 5.377494e-49 | -8.615850e-47 |
| Msa0160960 | Msa0196670 | 0.834171 | 3.497859e-56 | -8.615850e-47 |
| Msa0167980 | Msa0196670 | 0.811581 | 6.516032e-51 | -8.615850e-47 |
| Msa0175540 | Msa0196670 | 0.811276 | 7.590276e-51 | -8.615850e-47 |
| Msa0178040 | Msa0196670 | 0.806633 | 7.482105e-50 | -8.615850e-47 |
| Msa0181730 | Msa0196670 | 0.803614 | 3.205199e-49 | -8.615850e-47 |
| Msa0183980 | Msa0196670 | 0.825934 | 3.574875e-54 | -8.615850e-47 |
| Msa0186950 | Msa0196670 | 0.811979 | 5.337865e-51 | -8.615850e-47 |
| Msa0187490 | Msa0196670 | 0.842690 | 2.216687e-58 | -8.615850e-47 |
| Msa0189030 | Msa0196670 | 0.850322 | 1.829798e-60 | -8.615850e-47 |
| Msa0190250 | Msa0196670 | 0.813681 | 2.263184e-51 | -8.615850e-47 |
| Msa0191070 | Msa0196670 | 0.829006 | 6.552344e-55 | -8.615850e-47 |
| Msa0194080 | Msa0196670 | 0.804714 | 1.892281e-49 | -8.615850e-47 |
| Msa0196670 | Msa0206010 | 0.825969 | 3.506580e-54 | -8.615850e-47 |
| Msa0196670 | Msa0209080 | 0.801027 | 1.092685e-48 | -8.615850e-47 |
| Msa0196670 | Msa0213540 | 0.801938 | 7.108880e-49 | -8.615850e-47 |
| Msa0196670 | Msa0217670 | 0.804178 | 2.446594e-49 | -8.615850e-47 |
| Msa0196670 | Msa0217680 | 0.823103 | 1.658521e-53 | -8.615850e-47 |
| Msa0196670 | Msa0218370 | 0.854112 | 1.528815e-61 | -8.615850e-47 |
| Msa0196670 | Msa0232790 | 0.803374 | 3.594782e-49 | -8.615850e-47 |
| Msa0196670 | Msa0233370 | 0.852854 | 3.512583e-61 | -8.615850e-47 |
| Msa0196670 | Msa0236420 | 0.837043 | 6.561175e-57 | -8.615850e-47 |
| Msa0196670 | Msa0237320 | 0.810288 | 1.241849e-50 | -8.615850e-47 |
| Msa0196670 | Msa0241140 | 0.808869 | 2.505893e-50 | -8.615850e-47 |
| Msa0196670 | Msa0244980 | 0.810423 | 1.161416e-50 | -8.615850e-47 |
| Msa0196670 | Msa0257490 | 0.801099 | 1.056376e-48 | -8.615850e-47 |
| Msa0196670 | Msa0257500 | 0.815830 | 7.562321e-52 | -8.615850e-47 |
| Msa0196670 | Msa0262370 | 0.809454 | 1.877040e-50 | -8.615850e-47 |
| Msa0196670 | Msa0270960 | 0.838685 | 2.483019e-57 | -8.615850e-47 |
| Msa0196670 | Msa0271580 | 0.800456 | 1.429309e-48 | -8.615850e-47 |
| Msa0196670 | Msa0271790 | 0.813415 | 2.589236e-51 | -8.615850e-47 |
| Msa0196670 | Msa0273770 | 0.807341 | 5.298720e-50 | -8.615850e-47 |
| Msa0196670 | Msa0274740 | 0.804892 | 1.736316e-49 | -8.615850e-47 |
| Msa0196670 | Msa0276100 | 0.919203 | 6.033238e-87 | -8.615850e-47 |
| Msa0196670 | Msa0278580 | 0.844429 | 7.604496e-59 | -8.615850e-47 |
| Msa0196670 | Msa0283420 | 0.809415 | 1.913608e-50 | -8.615850e-47 |
| Msa0196670 | Msa0284450 | 0.800198 | 1.612442e-48 | -8.615850e-47 |
| Msa0196670 | Msa0285330 | 0.806855 | 6.717330e-50 | -8.615850e-47 |
| Msa0196670 | Msa0286670 | 0.823502 | 1.338022e-53 | -8.615850e-47 |
| Msa0196670 | Msa0287410 | 0.822553 | 2.227601e-53 | -8.615850e-47 |
| Msa0196670 | Msa0296790 | 0.818946 | 1.503497e-52 | -8.615850e-47 |
| Msa0196670 | Msa0299660 | 0.800625 | 1.319839e-48 | -8.615850e-47 |
| Msa0196670 | Msa0305410 | 0.814760 | 1.307211e-51 | -8.615850e-47 |
| Msa0196670 | Msa0308440 | 0.831540 | 1.575391e-55 | -8.615850e-47 |
| Msa0196670 | Msa0309270 | 0.840570 | 8.030426e-58 | -8.615850e-47 |
| Msa0196670 | Msa0310430 | 0.822812 | 1.938791e-53 | -8.615850e-47 |
| Msa0196670 | Msa0311720 | 0.837317 | 5.581613e-57 | -8.615850e-47 |
| Msa0196670 | Msa0316390 | 0.843530 | 1.324017e-58 | -8.615850e-47 |
| Msa0196670 | Msa0317960 | 0.852777 | 3.694278e-61 | -8.615850e-47 |
| Msa0196670 | Msa0321690 | 0.815906 | 7.269720e-52 | -8.615850e-47 |
| Msa0196670 | Msa0326110 | 0.829606 | 4.686779e-55 | -8.615850e-47 |
| Msa0196670 | Msa0331020 | 0.828641 | 8.031152e-55 | -8.615850e-47 |
| Msa0196670 | Msa0339910 | 0.816343 | 5.806014e-52 | -8.615850e-47 |
| Msa0196670 | Msa0346890 | 0.800916 | 1.151216e-48 | -8.615850e-47 |
| Msa0196670 | Msa0347750 | 0.825174 | 5.413860e-54 | -8.615850e-47 |
| Msa0196670 | Msa0363790 | 0.818229 | 2.185972e-52 | -8.615850e-47 |
| Msa0196670 | Msa0364790 | 0.808775 | 2.623553e-50 | -8.615850e-47 |
| Msa0196670 | Msa0376910 | 0.850099 | 2.113918e-60 | -8.615850e-47 |
| Msa0196670 | Msa0382310 | 0.821412 | 4.094767e-53 | -8.615850e-47 |
| Msa0196670 | Msa0382370 | 0.808045 | 3.755996e-50 | -8.615850e-47 |
| Msa0196670 | Msa0385490 | 0.806925 | 6.490593e-50 | -8.615850e-47 |
| Msa0196670 | Msa0385500 | 0.814857 | 1.244091e-51 | -8.615850e-47 |
| Msa0196670 | Msa0388730 | 0.849397 | 3.320526e-60 | -8.615850e-47 |
| Msa0196670 | Msa0392270 | 0.802938 | 4.424205e-49 | -8.615850e-47 |
| Msa0196670 | Msa0397270 | 0.800357 | 1.496939e-48 | -8.615850e-47 |
| Msa0196670 | Msa0401560 | 0.807508 | 4.884346e-50 | -8.615850e-47 |
| Msa0196670 | Msa0403490 | 0.809914 | 1.495088e-50 | -8.615850e-47 |
| Msa0196670 | Msa0403770 | 0.840006 | 1.127329e-57 | -8.615850e-47 |
| Msa0196670 | Msa0417330 | 0.809705 | 1.658200e-50 | -8.615850e-47 |
| Msa0196670 | Msa0427580 | 0.818849 | 1.581760e-52 | -8.615850e-47 |
| Msa0196670 | Msa0431210 | 0.818385 | 2.015040e-52 | -8.615850e-47 |
| Msa0196670 | Msa0432160 | 0.809510 | 1.826320e-50 | -8.615850e-47 |
| Msa0196670 | Msa0432500 | 0.817657 | 2.943214e-52 | -8.615850e-47 |
| Msa0196670 | Msa0438040 | 0.842845 | 2.016187e-58 | -8.615850e-47 |
| Msa0196670 | Msa0439980 | 0.834511 | 2.873103e-56 | -8.615850e-47 |
| Msa0196670 | Msa0455590 | 0.815308 | 9.879924e-52 | -8.615850e-47 |
| Msa0196670 | Msa0456770 | 0.815497 | 8.968013e-52 | -8.615850e-47 |
| Msa0196670 | Msa0468320 | 0.800386 | 1.476683e-48 | -8.615850e-47 |
| Msa0196670 | Msa0471900 | 0.838854 | 2.245674e-57 | -8.615850e-47 |
| Msa0196670 | Msa0472960 | -0.819607 | 1.062895e-52 | -8.615850e-47 |
| Msa0196670 | Msa0476680 | 0.808551 | 2.929467e-50 | -8.615850e-47 |
| Msa0196670 | Msa0481030 | 0.808864 | 2.512119e-50 | -8.615850e-47 |
| Msa0196670 | Msa0482940 | 0.831648 | 1.481495e-55 | -8.615850e-47 |
| Msa0196670 | Msa0484630 | 0.819229 | 1.296074e-52 | -8.615850e-47 |
| Msa0196670 | Msa0485490 | 0.825002 | 5.942537e-54 | -8.615850e-47 |
| Msa0196670 | Msa0485710 | 0.813175 | 2.924168e-51 | -8.615850e-47 |
| Msa0196670 | Msa0486820 | 0.835885 | 1.292946e-56 | -8.615850e-47 |
| Msa0196670 | Msa0487710 | 0.805323 | 1.411104e-49 | -8.615850e-47 |
| Msa0196670 | Msa0518170 | 0.835028 | 2.130141e-56 | -8.615850e-47 |
| Msa0196670 | Msa0520270 | 0.820076 | 8.300576e-53 | -8.615850e-47 |
| Msa0196670 | Msa0521010 | 0.807060 | 6.078189e-50 | -8.615850e-47 |
| Msa0196670 | Msa0521270 | 0.818427 | 1.971820e-52 | -8.615850e-47 |
| Msa0196670 | Msa0522070 | 0.807588 | 4.697434e-50 | -8.615850e-47 |
| Msa0196670 | Msa0527540 | 0.803209 | 3.888982e-49 | -8.615850e-47 |
| Msa0196670 | Msa0527740 | 0.842747 | 2.141145e-58 | -8.615850e-47 |
| Msa0196670 | Msa0538670 | 0.801619 | 8.266067e-49 | -8.615850e-47 |
| Msa0196670 | Msa0542260 | 0.809092 | 2.245175e-50 | -8.615850e-47 |
| Msa0196670 | Msa0542290 | 0.800269 | 1.559845e-48 | -8.615850e-47 |
| Msa0196670 | Msa0542560 | 0.861741 | 8.292475e-64 | -8.615850e-47 |
| Msa0196670 | Msa0545050 | 0.810430 | 1.157261e-50 | -8.615850e-47 |
| Msa0196670 | Msa0547160 | 0.806063 | 9.868979e-50 | -8.615850e-47 |
| Msa0196670 | Msa0561240 | 0.833906 | 4.073302e-56 | -8.615850e-47 |
| Msa0196670 | Msa0566350 | 0.848374 | 6.384230e-60 | -8.615850e-47 |
| Msa0196670 | Msa0566750 | 0.840428 | 8.747381e-58 | -8.615850e-47 |
| Msa0196670 | Msa0569780 | 0.805555 | 1.261781e-49 | -8.615850e-47 |
| Msa0196670 | Msa0588240 | 0.813998 | 1.926487e-51 | -8.615850e-47 |
| Msa0196670 | Msa0600080 | 0.800190 | 1.618592e-48 | -8.615850e-47 |
| Msa0196670 | Msa0600590 | 0.825471 | 4.603843e-54 | -8.615850e-47 |
| Msa0196670 | Msa0604290 | 0.859747 | 3.339592e-63 | -8.615850e-47 |
| Msa0196670 | Msa0606080 | 0.801846 | 7.425452e-49 | -8.615850e-47 |
| Msa0196670 | Msa0610250 | 0.801071 | 1.070247e-48 | -8.615850e-47 |
| Msa0196670 | Msa0613340 | 0.803197 | 3.910046e-49 | -8.615850e-47 |
| Msa0196670 | Msa0615340 | 0.804616 | 1.983366e-49 | -8.615850e-47 |
| Msa0196670 | Msa0621600 | 0.824177 | 9.294841e-54 | -8.615850e-47 |
| Msa0196670 | Msa0623990 | 0.827404 | 1.594074e-54 | -8.615850e-47 |
| Msa0196670 | Msa0624060 | 0.845310 | 4.399204e-59 | -8.615850e-47 |
| Msa0196670 | Msa0641130 | 0.807371 | 5.223274e-50 | -8.615850e-47 |
| Msa0196670 | Msa0645530 | 0.811206 | 7.860980e-51 | -8.615850e-47 |
| Msa0196670 | Msa0654620 | 0.809221 | 2.105966e-50 | -8.615850e-47 |
| Msa0196670 | Msa0654690 | 0.838550 | 2.690068e-57 | -8.615850e-47 |
| Msa0196670 | Msa0657120 | 0.859769 | 3.289291e-63 | -8.615850e-47 |
| Msa0196670 | Msa0658680 | 0.804724 | 1.882839e-49 | -8.615850e-47 |
| Msa0196670 | Msa0662540 | 0.843822 | 1.105953e-58 | -8.615850e-47 |
| Msa0196670 | Msa0676130 | 0.840310 | 9.393435e-58 | -8.615850e-47 |
| Msa0196670 | Msa0676180 | 0.836633 | 8.345037e-57 | -8.615850e-47 |
| Msa0196670 | Msa0685090 | 0.821623 | 3.658952e-53 | -8.615850e-47 |
| Msa0196670 | Msa0689320 | 0.820685 | 6.019940e-53 | -8.615850e-47 |
| Msa0196670 | Msa0701100 | 0.859557 | 3.809810e-63 | -8.615850e-47 |
| Msa0196670 | Msa0705990 | 0.826141 | 3.193250e-54 | -8.615850e-47 |
| Msa0196670 | Msa0719180 | 0.801608 | 8.309440e-49 | -8.615850e-47 |
| Msa0196670 | Msa0724370 | 0.803400 | 3.549827e-49 | -8.615850e-47 |
| Msa0196670 | Msa0727530 | 0.804831 | 1.788860e-49 | -8.615850e-47 |
| Msa0196670 | Msa0731180 | 0.802212 | 6.244207e-49 | -8.615850e-47 |
| Msa0196670 | Msa0732050 | 0.804978 | 1.666195e-49 | -8.615850e-47 |
| Msa0196670 | Msa0732880 | 0.815719 | 8.002468e-52 | -8.615850e-47 |
| Msa0196670 | Msa0738030 | 0.816156 | 6.394026e-52 | -8.615850e-47 |
| Msa0196670 | Msa0742150 | 0.819774 | 9.734787e-53 | -8.615850e-47 |
| Msa0196670 | Msa0746170 | 0.837792 | 4.217080e-57 | -8.615850e-47 |
| Msa0196670 | Msa0746210 | 0.833492 | 5.169407e-56 | -8.615850e-47 |
| Msa0196670 | Msa0750810 | 0.815041 | 1.132564e-51 | -8.615850e-47 |
| Msa0196670 | Msa0750850 | 0.840905 | 6.559155e-58 | -8.615850e-47 |
| Msa0196670 | Msa0763890 | 0.802958 | 4.381985e-49 | -8.615850e-47 |
| Msa0196670 | Msa0763920 | 0.807903 | 4.027242e-50 | -8.615850e-47 |
| Msa0196670 | Msa0764920 | 0.816435 | 5.537376e-52 | -8.615850e-47 |
| Msa0196670 | Msa0765440 | 0.808469 | 3.049740e-50 | -8.615850e-47 |
| Msa0196670 | Msa0771580 | 0.802529 | 5.372447e-49 | -8.615850e-47 |
| Msa0196670 | Msa0775560 | 0.829736 | 4.357489e-55 | -8.615850e-47 |
| Msa0196670 | Msa0788540 | 0.809233 | 2.093479e-50 | -8.615850e-47 |
| Msa0196670 | Msa0795340 | 0.818969 | 1.484782e-52 | -8.615850e-47 |
| Msa0196670 | Msa0812950 | 0.832217 | 1.072396e-55 | -8.615850e-47 |
| Msa0196670 | Msa0823440 | 0.808217 | 3.452446e-50 | -8.615850e-47 |
| Msa0196670 | Msa0829220 | 0.819569 | 1.084210e-52 | -8.615850e-47 |
| Msa0196670 | Msa0831850 | 0.811685 | 6.187665e-51 | -8.615850e-47 |
| Msa0196670 | Msa0832150 | 0.807839 | 4.154459e-50 | -8.615850e-47 |
| Msa0196670 | Msa0844110 | 0.812524 | 4.060899e-51 | -8.615850e-47 |
| Msa0196670 | Msa0844280 | 0.801569 | 8.465048e-49 | -8.615850e-47 |
| Msa0196670 | Msa0844610 | 0.829636 | 4.607429e-55 | -8.615850e-47 |
| Msa0196670 | Msa0844830 | 0.800652 | 1.303547e-48 | -8.615850e-47 |
| Msa0196670 | Msa0846230 | 0.801066 | 1.072788e-48 | -8.615850e-47 |
| Msa0196670 | Msa0847470 | 0.806692 | 7.269839e-50 | -8.615850e-47 |
| Msa0196670 | Msa0853440 | 0.812648 | 3.814976e-51 | -8.615850e-47 |
| Msa0196670 | Msa0861470 | 0.838899 | 2.185827e-57 | -8.615850e-47 |
| Msa0196670 | Msa0861570 | 0.837609 | 4.697690e-57 | -8.615850e-47 |
| Msa0196670 | Msa0862280 | 0.800022 | 1.751373e-48 | -8.615850e-47 |
| Msa0196670 | Msa0871430 | 0.820851 | 5.513317e-53 | -8.615850e-47 |
| Msa0196670 | Msa0872440 | 0.807209 | 5.652825e-50 | -8.615850e-47 |
| Msa0196670 | Msa0877710 | 0.820239 | 7.618997e-53 | -8.615850e-47 |
| Msa0196670 | Msa0878220 | 0.808189 | 3.499526e-50 | -8.615850e-47 |
| Msa0196670 | Msa0880810 | 0.832613 | 8.554582e-56 | -8.615850e-47 |
| Msa0196670 | Msa0888260 | 0.833098 | 6.481611e-56 | -8.615850e-47 |
| Msa0196670 | Msa0894710 | 0.813759 | 2.174936e-51 | -8.615850e-47 |
| Msa0196670 | Msa0905730 | 0.803889 | 2.810317e-49 | -8.615850e-47 |
| Msa0196670 | Msa0932100 | 0.805445 | 1.330166e-49 | -8.615850e-47 |
| Msa0196670 | Msa0944020 | 0.802665 | 5.038106e-49 | -8.615850e-47 |
| Msa0196670 | Msa0958920 | 0.857178 | 1.948662e-62 | -8.615850e-47 |
| Msa0196670 | Msa0960390 | 0.801634 | 8.209455e-49 | -8.615850e-47 |
| Msa0196670 | Msa0970230 | 0.804108 | 2.530660e-49 | -8.615850e-47 |
| Msa0196670 | Msa0970480 | 0.823278 | 1.509801e-53 | -8.615850e-47 |
| Msa0196670 | Msa0980020 | 0.802146 | 6.444167e-49 | -8.615850e-47 |
| Msa0196670 | Msa0985180 | 0.817355 | 3.442915e-52 | -8.615850e-47 |
| Msa0196670 | Msa0992580 | 0.827038 | 1.951107e-54 | -8.615850e-47 |
| Msa0196670 | Msa0992600 | 0.824681 | 7.074972e-54 | -8.615850e-47 |
| Msa0196670 | Msa0994370 | 0.849254 | 3.637776e-60 | -8.615850e-47 |
| Msa0196670 | Msa1006730 | 0.823999 | 1.023687e-53 | -8.615850e-47 |
| Msa0196670 | Msa1013070 | 0.874908 | 4.675504e-68 | -8.615850e-47 |
| Msa0196670 | Msa1023180 | 0.819467 | 1.143893e-52 | -8.615850e-47 |
| Msa0196670 | Msa1023300 | 0.812977 | 3.231670e-51 | -8.615850e-47 |
| Msa0196670 | Msa1023310 | 0.850047 | 2.185436e-60 | -8.615850e-47 |
| Msa0196670 | Msa1024710 | 0.805081 | 1.585351e-49 | -8.615850e-47 |
| Msa0196670 | Msa1026640 | 0.845281 | 4.479313e-59 | -8.615850e-47 |
| Msa0196670 | Msa1034150 | 0.804015 | 2.646198e-49 | -8.615850e-47 |
| Msa0196670 | Msa1042660 | 0.834185 | 3.469015e-56 | -8.615850e-47 |
| Msa0196670 | Msa1043050 | 0.822963 | 1.787807e-53 | -8.615850e-47 |
| Msa0196670 | Msa1051850 | 0.803010 | 4.275565e-49 | -8.615850e-47 |
| Msa0196670 | Msa1054510 | 0.805504 | 1.293188e-49 | -8.615850e-47 |
| Msa0196670 | Msa1062040 | 0.864223 | 1.418939e-64 | -8.615850e-47 |
| Msa0196670 | Msa1063420 | 0.824062 | 9.891471e-54 | -8.615850e-47 |
| Msa0196670 | Msa1070520 | 0.809789 | 1.590653e-50 | -8.615850e-47 |
| Msa0196670 | Msa1071320 | 0.844791 | 6.074650e-59 | -8.615850e-47 |
| Msa0196670 | Msa1077070 | 0.808799 | 2.592846e-50 | -8.615850e-47 |
| Msa0196670 | Msa1077340 | 0.802133 | 6.482723e-49 | -8.615850e-47 |
| Msa0196670 | Msa1081790 | -0.838907 | 2.176007e-57 | -8.615850e-47 |
| Msa0196670 | Msa1082360 | 0.826606 | 2.473160e-54 | -8.615850e-47 |
| Msa0196670 | Msa1088390 | 0.802705 | 4.942176e-49 | -8.615850e-47 |
| Msa0196670 | Msa1089320 | 0.817253 | 3.629804e-52 | -8.615850e-47 |
| Msa0196670 | Msa1089460 | 0.847652 | 1.009598e-59 | -8.615850e-47 |
| Msa0196670 | Msa1094280 | 0.847374 | 1.203849e-59 | -8.615850e-47 |
| Msa0196670 | Msa1096070 | 0.810536 | 1.097765e-50 | -8.615850e-47 |
| Msa0196670 | Msa1096950 | 0.809274 | 2.051657e-50 | -8.615850e-47 |
| Msa0196670 | Msa1101220 | 0.805299 | 1.427147e-49 | -8.615850e-47 |
| Msa0196670 | Msa1107200 | 0.868577 | 5.887685e-66 | -8.615850e-47 |
| Msa0196670 | Msa1107260 | 0.823505 | 1.336142e-53 | -8.615850e-47 |
| Msa0196670 | Msa1108710 | 0.808609 | 2.847337e-50 | -8.615850e-47 |
| Msa0196670 | Msa1109810 | 0.822526 | 2.259700e-53 | -8.615850e-47 |
| Msa0196670 | Msa1122150 | 0.848092 | 7.639371e-60 | -8.615850e-47 |
| Msa0196670 | Msa1137780 | 0.806835 | 6.783537e-50 | -8.615850e-47 |
| Msa0196670 | Msa1140230 | 0.817566 | 3.086034e-52 | -8.615850e-47 |
| Msa0196670 | Msa1150710 | 0.833487 | 5.184390e-56 | -8.615850e-47 |
| Msa0196670 | Msa1150780 | 0.848119 | 7.509175e-60 | -8.615850e-47 |
| Msa0196670 | Msa1150800 | 0.815505 | 8.934695e-52 | -8.615850e-47 |
| Msa0196670 | Msa1150810 | 0.827208 | 1.776357e-54 | -8.615850e-47 |
| Msa0196670 | Msa1150900 | 0.809342 | 1.984251e-50 | -8.615850e-47 |
| Msa0196670 | Msa1158370 | 0.802365 | 5.808362e-49 | -8.615850e-47 |
| Msa0196670 | Msa1160560 | 0.845591 | 3.692347e-59 | -8.615850e-47 |
| Msa0196670 | Msa1166090 | -0.834103 | 3.636814e-56 | -8.615850e-47 |
| Msa0196670 | Msa1187590 | 0.802220 | 6.222063e-49 | -8.615850e-47 |
| Msa0196670 | Msa1202660 | 0.801813 | 7.542210e-49 | -8.615850e-47 |
| Msa0196670 | Msa1206100 | 0.821820 | 3.295468e-53 | -8.615850e-47 |
| Msa0196670 | Msa1207310 | 0.857817 | 1.260043e-62 | -8.615850e-47 |
| Msa0196670 | Msa1207350 | 0.804274 | 2.337524e-49 | -8.615850e-47 |
| Msa0196670 | Msa1208380 | 0.875122 | 3.950331e-68 | -8.615850e-47 |
| Msa0196670 | Msa1209190 | 0.810836 | 9.455791e-51 | -8.615850e-47 |
| Msa0196670 | Msa1214170 | 0.804183 | 2.440695e-49 | -8.615850e-47 |
| Msa0196670 | Msa1218580 | 0.832370 | 9.827602e-56 | -8.615850e-47 |
| Msa0196670 | Msa1220930 | 0.818184 | 2.238228e-52 | -8.615850e-47 |
| Msa0196670 | Msa1221330 | 0.810962 | 8.880908e-51 | -8.615850e-47 |
| Msa0196670 | Msa1225600 | 0.811006 | 8.687275e-51 | -8.615850e-47 |
| Msa0196670 | Msa1229480 | 0.814892 | 1.222417e-51 | -8.615850e-47 |
| Msa0196670 | Msa1231810 | 0.805230 | 1.475506e-49 | -8.615850e-47 |
| Msa0196670 | Msa1239620 | 0.809176 | 2.153952e-50 | -8.615850e-47 |
| Msa0196670 | Msa1240970 | 0.846567 | 2.003288e-59 | -8.615850e-47 |
| Msa0196670 | Msa1250110 | 0.818570 | 1.829303e-52 | -8.615850e-47 |
| Msa0196670 | Msa1250730 | 0.811485 | 6.838677e-51 | -8.615850e-47 |
| Msa0196670 | Msa1259530 | 0.824903 | 6.272735e-54 | -8.615850e-47 |
| Msa0196670 | Msa1259860 | 0.801028 | 1.092215e-48 | -8.615850e-47 |
| Msa0196670 | Msa1267480 | 0.800618 | 1.324446e-48 | -8.615850e-47 |
| Msa0196670 | Msa1270660 | 0.852719 | 3.838584e-61 | -8.615850e-47 |
| Msa0196670 | Msa1270730 | 0.852579 | 4.208761e-61 | -8.615850e-47 |
| Msa0196670 | Msa1272010 | 0.813167 | 2.935138e-51 | -8.615850e-47 |
| Msa0196670 | Msa1276150 | 0.800706 | 1.270806e-48 | -8.615850e-47 |
| Msa0196670 | Msa1277410 | 0.805149 | 1.534241e-49 | -8.615850e-47 |
| Msa0196670 | Msa1279100 | 0.801746 | 7.787137e-49 | -8.615850e-47 |
| Msa0196670 | Msa1291450 | 0.843024 | 1.806417e-58 | -8.615850e-47 |
| Msa0196670 | Msa1295330 | 0.819097 | 1.389093e-52 | -8.615850e-47 |
| Msa0196670 | Msa1295930 | 0.817566 | 3.085081e-52 | -8.615850e-47 |
| Msa0196670 | Msa1305660 | 0.807119 | 5.905326e-50 | -8.615850e-47 |
| Msa0196670 | Msa1307160 | 0.809296 | 2.030112e-50 | -8.615850e-47 |
| Msa0196670 | Msa1307180 | 0.853996 | 1.651076e-61 | -8.615850e-47 |
| Msa0196670 | Msa1312500 | 0.812744 | 3.634677e-51 | -8.615850e-47 |
| Msa0196670 | Msa1316360 | 0.867841 | 1.016068e-65 | -8.615850e-47 |
| Msa0196670 | Msa1316440 | 0.814282 | 1.668148e-51 | -8.615850e-47 |
| Msa0196670 | Msa1328520 | 0.803973 | 2.699376e-49 | -8.615850e-47 |
| Msa0196670 | Msa1329200 | 0.803135 | 4.028546e-49 | -8.615850e-47 |
| Msa0196670 | Msa1329550 | 0.821603 | 3.698401e-53 | -8.615850e-47 |
| Msa0196670 | Msa1331320 | 0.836972 | 6.839104e-57 | -8.615850e-47 |
| Msa0196670 | Msa1331350 | 0.834871 | 2.332145e-56 | -8.615850e-47 |
| Msa0196670 | Msa1335230 | 0.858201 | 9.689497e-63 | -8.615850e-47 |
| Msa0196670 | Msa1339190 | 0.844699 | 6.430751e-59 | -8.615850e-47 |
| Msa0196670 | Msa1346840 | 0.819861 | 9.297706e-53 | -8.615850e-47 |
| Msa0196670 | Msa1352890 | 0.807093 | 5.981954e-50 | -8.615850e-47 |
| Msa0196670 | Msa1355180 | 0.832305 | 1.020027e-55 | -8.615850e-47 |
| Msa0196670 | Msa1355890 | 0.847951 | 8.356522e-60 | -8.615850e-47 |
| Msa0196670 | Msa1360020 | 0.806511 | 7.939736e-50 | -8.615850e-47 |
| Msa0196670 | Msa1364210 | 0.818580 | 1.819846e-52 | -8.615850e-47 |
| Msa0196670 | Msa1369920 | -0.812646 | 3.818617e-51 | -8.615850e-47 |
| Msa0196670 | Msa1370590 | 0.832570 | 8.765310e-56 | -8.615850e-47 |
| Msa0196670 | Msa1371240 | 0.818092 | 2.348010e-52 | -8.615850e-47 |
| Msa0196670 | Msa1372290 | 0.819030 | 1.438520e-52 | -8.615850e-47 |
| Msa0196670 | Msa1377080 | 0.835727 | 1.418379e-56 | -8.615850e-47 |
| Msa0196670 | Msa1378410 | 0.842960 | 1.879491e-58 | -8.615850e-47 |
| Msa0196670 | Msa1382020 | 0.849671 | 2.784884e-60 | -8.615850e-47 |
| Msa0196670 | Msa1384100 | 0.833985 | 3.893757e-56 | -8.615850e-47 |
| Msa0196670 | Msa1387240 | 0.803597 | 3.231926e-49 | -8.615850e-47 |
| Msa0196670 | Msa1396400 | -0.833846 | 4.217290e-56 | -8.615850e-47 |
| Msa0196670 | Msa1397120 | 0.843684 | 1.203995e-58 | -8.615850e-47 |
| Msa0196670 | Msa1401990 | 0.803978 | 2.692874e-49 | -8.615850e-47 |
| Msa0196670 | Msa1403890 | 0.838960 | 2.107485e-57 | -8.615850e-47 |
| Msa0196670 | Msa1404290 | 0.816992 | 4.154180e-52 | -8.615850e-47 |
| Msa0196670 | Msa1407600 | 0.818948 | 1.501607e-52 | -8.615850e-47 |
| Msa0196670 | Msa1407760 | 0.838073 | 3.571032e-57 | -8.615850e-47 |
| Msa0196670 | Msa1411410 | 0.810049 | 1.398461e-50 | -8.615850e-47 |
| Msa0196670 | Msa1419840 | 0.838407 | 2.929765e-57 | -8.615850e-47 |
| Msa0196670 | Msa1421210 | 0.810572 | 1.078152e-50 | -8.615850e-47 |
| Msa0196670 | Msa1423820 | 0.848981 | 4.332708e-60 | -8.615850e-47 |
| Msa0196670 | Msa1428780 | 0.853746 | 1.949228e-61 | -8.615850e-47 |
| Msa0196670 | Msa1430130 | 0.823611 | 1.261992e-53 | -8.615850e-47 |
| Msa0196670 | Msa1436600 | 0.827050 | 1.937341e-54 | -8.615850e-47 |
| Msa0196670 | Msa1437330 | 0.836796 | 7.585874e-57 | -8.615850e-47 |
| Msa0196670 | Msa1437730 | 0.851502 | 8.510260e-61 | -8.615850e-47 |
| Msa0196670 | Msa1438840 | 0.857690 | 1.374377e-62 | -8.615850e-47 |
| Msa0196670 | Msa1442790 | 0.816274 | 6.016881e-52 | -8.615850e-47 |
| Msa0196670 | Msa1444120 | 0.827000 | 1.992132e-54 | -8.615850e-47 |
| Msa0196670 | Msa1446080 | 0.807309 | 5.382173e-50 | -8.615850e-47 |
| Msa0196670 | Msa1447890 | 0.828128 | 1.067736e-54 | -8.615850e-47 |
| Msa0196670 | Msa1448630 | 0.811425 | 7.045558e-51 | -8.615850e-47 |
| Msa0196670 | Msa1449750 | 0.800100 | 1.688354e-48 | -8.615850e-47 |
| Msa0196670 | Msa1458290 | 0.830415 | 2.974355e-55 | -8.615850e-47 |
| Msa0196670 | Msa1460750 | 0.821039 | 4.988975e-53 | -8.615850e-47 |
| Msa0196670 | Msa1462290 | 0.832067 | 1.168134e-55 | -8.615850e-47 |
| Msa0196670 | Msa1463600 | 0.803701 | 3.074011e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196670 | MtrunA17_Chr2g0288531 | 99.153 | 118 | 1 | 0 | 1 | 118 | 1 | 118 | 2.56e-84 | 241 |
| Msa0196670 | MtrunA17_Chr4g0024721 | 80.342 | 117 | 23 | 0 | 1 | 117 | 1 | 117 | 3.50e-71 | 208 |
| Msa0196670 | MtrunA17_Chr2g0322571 | 80.342 | 117 | 23 | 0 | 1 | 117 | 1 | 117 | 1.49e-70 | 206 |
| Msa0196670 | MtrunA17_Chr4g0056301 | 76.923 | 117 | 27 | 0 | 1 | 117 | 1 | 117 | 3.85e-66 | 195 |
| Msa0196670 | MtrunA17_Chr4g0019141 | 72.174 | 115 | 30 | 1 | 1 | 113 | 1 | 115 | 4.27e-55 | 167 |
| Msa0196670 | MtrunA17_Chr7g0260981 | 55.752 | 113 | 50 | 0 | 5 | 117 | 6 | 118 | 2.21e-46 | 145 |
| Msa0196670 | MtrunA17_Chr4g0069171 | 54.867 | 113 | 51 | 0 | 5 | 117 | 6 | 118 | 3.87e-46 | 145 |
| Msa0196670 | MtrunA17_Chr1g0194141 | 55.357 | 112 | 50 | 0 | 6 | 117 | 7 | 118 | 3.32e-42 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196670 | AT4G21980.2 | 83.898 | 118 | 19 | 0 | 1 | 118 | 16 | 133 | 3.69e-73 | 214 |
| Msa0196670 | AT4G21980.1 | 83.898 | 118 | 19 | 0 | 1 | 118 | 1 | 118 | 4.13e-73 | 213 |
| Msa0196670 | AT1G62040.1 | 82.051 | 117 | 21 | 0 | 1 | 117 | 1 | 117 | 1.21e-71 | 209 |
| Msa0196670 | AT4G04620.3 | 83.051 | 118 | 20 | 0 | 1 | 118 | 1 | 118 | 5.22e-71 | 208 |
| Msa0196670 | AT4G04620.2 | 83.051 | 118 | 20 | 0 | 1 | 118 | 1 | 118 | 5.22e-71 | 208 |
| Msa0196670 | AT4G04620.1 | 83.051 | 118 | 20 | 0 | 1 | 118 | 1 | 118 | 5.22e-71 | 208 |
| Msa0196670 | AT2G05630.1 | 78.632 | 117 | 25 | 0 | 1 | 117 | 1 | 117 | 6.74e-69 | 202 |
| Msa0196670 | AT4G16520.2 | 76.068 | 117 | 28 | 0 | 1 | 117 | 1 | 117 | 2.75e-65 | 194 |
| Msa0196670 | AT4G16520.1 | 76.068 | 117 | 28 | 0 | 1 | 117 | 1 | 117 | 2.75e-65 | 194 |
| Msa0196670 | AT3G60640.1 | 73.729 | 118 | 31 | 0 | 1 | 118 | 1 | 118 | 1.66e-64 | 191 |
| Msa0196670 | AT2G05630.2 | 80.189 | 106 | 21 | 0 | 12 | 117 | 56 | 161 | 9.45e-63 | 189 |
| Msa0196670 | AT2G45170.2 | 72.269 | 119 | 32 | 1 | 1 | 118 | 1 | 119 | 2.67e-62 | 186 |
| Msa0196670 | AT2G45170.1 | 72.269 | 119 | 32 | 1 | 1 | 118 | 1 | 119 | 2.67e-62 | 186 |
| Msa0196670 | AT1G62040.2 | 79.775 | 89 | 18 | 0 | 1 | 89 | 1 | 89 | 1.17e-49 | 153 |
| Msa0196670 | AT4G16520.3 | 78.409 | 88 | 19 | 0 | 30 | 117 | 30 | 117 | 1.31e-47 | 149 |
| Msa0196670 | AT3G15580.1 | 57.522 | 113 | 48 | 0 | 5 | 117 | 3 | 115 | 5.60e-45 | 142 |
| Msa0196670 | AT3G06420.1 | 53.982 | 113 | 52 | 0 | 5 | 117 | 7 | 119 | 1.04e-41 | 134 |
Find 46 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATAAGATCATCTACTTTA+TGG | 0.154043 | 2_1:+14061922 | Msa0196670:three_prime_UTR |
| TAATCGATGAATTTAGATTT+TGG | 0.186511 | 2_1:+14061866 | Msa0196670:three_prime_UTR |
| GTTTATATTGAATTGAAATT+AGG | 0.197923 | 2_1:-14059533 | None:intergenic |
| TGATCGAATCGAAGTGAAAT+TGG | 0.243113 | 2_1:-14059581 | None:intergenic |
| CATCCTTATGTTCTTCATAA+AGG | 0.263042 | 2_1:-14061652 | None:intergenic |
| AATTGAAATTAGGGTTTGTT+TGG | 0.264691 | 2_1:-14059523 | None:intergenic |
| AATTAGGGTTTGTTTGGGTT+TGG | 0.273530 | 2_1:-14059517 | None:intergenic |
| TTTATATTGAATTGAAATTA+GGG | 0.282883 | 2_1:-14059532 | None:intergenic |
| ATTAGGGTTTGTTTGGGTTT+GGG | 0.308222 | 2_1:-14059516 | None:intergenic |
| ATCCTTATGTTCTTCATAAA+GGG | 0.337341 | 2_1:-14061651 | None:intergenic |
| TTCAAGACTCAACATCCTTT+CGG | 0.352308 | 2_1:+14059766 | Msa0196670:CDS |
| GATCGAATCGAAGTGAAATT+GGG | 0.396149 | 2_1:-14059580 | None:intergenic |
| ATTGAAATTAGGGTTTGTTT+GGG | 0.407112 | 2_1:-14059522 | None:intergenic |
| GATGAAAGACGAAAGAATAA+TGG | 0.410914 | 2_1:-14059605 | None:intergenic |
| AATCTTACAGGTACTCTATC+AGG | 0.411891 | 2_1:-14060411 | None:intergenic |
| GAATACAGAATAGTATATAT+AGG | 0.420870 | 2_1:-14062171 | None:intergenic |
| GTGTTGTGTGCAGGTGATTG+TGG | 0.446452 | 2_1:+14060500 | Msa0196670:intron |
| TACAGTGGAGAGAACACCTT+TGG | 0.449519 | 2_1:+14061698 | Msa0196670:CDS |
| GTCCCAGCTGACTTGTCTGT+TGG | 0.460647 | 2_1:+14061447 | Msa0196670:CDS |
| TGCCCTTTATGAAGAACATA+AGG | 0.471436 | 2_1:+14061649 | Msa0196670:CDS |
| AATTTGAACTGTTATGTAGC+TGG | 0.483284 | 2_1:+14062042 | Msa0196670:three_prime_UTR |
| GAAAGGATGTTGAGTCTTGA+AGG | 0.484284 | 2_1:-14059764 | None:intergenic |
| TGATAACAGCGAAGCGCGGT+TGG | 0.488813 | 2_1:+14061958 | Msa0196670:three_prime_UTR |
| GAAAACACTCTACCTCCAAC+TGG | 0.492327 | 2_1:+14061537 | Msa0196670:CDS |
| GATAATGCATGTTTGAATTG+TGG | 0.509621 | 2_1:+14061888 | Msa0196670:three_prime_UTR |
| TGACCAACAGACAAGTCAGC+TGG | 0.519715 | 2_1:-14061450 | None:intergenic |
| ATGTTTGAATTGTGGTTGCT+TGG | 0.526447 | 2_1:+14061896 | Msa0196670:three_prime_UTR |
| GAGAGCTATATACAGAAAGA+AGG | 0.536911 | 2_1:-14061747 | None:intergenic |
| GCTGGATACTTACCAGTTGG+AGG | 0.558063 | 2_1:-14061549 | None:intergenic |
| AATTAAGCTCAGTGCAGAGA+AGG | 0.558355 | 2_1:+14061497 | Msa0196670:CDS |
| GAACACCTTTGGTTCCCACT+AGG | 0.568589 | 2_1:+14061709 | Msa0196670:CDS |
| TATCTCAAATTAAGCCTAGT+GGG | 0.570346 | 2_1:-14061723 | None:intergenic |
| CAGGTGATTGTGGAGAAAGC+TGG | 0.570859 | 2_1:+14060510 | Msa0196670:intron |
| GTATATGGCAGAAAGAAGAC+AGG | 0.574538 | 2_1:+14060359 | Msa0196670:intron |
| TTAAGCCTAGTGGGAACCAA+AGG | 0.592086 | 2_1:-14061714 | None:intergenic |
| AAAGGTGTTCTCTCCACTGT+AGG | 0.593040 | 2_1:-14061696 | None:intergenic |
| GCAGTCCATTGTCAAATACA+TGG | 0.593173 | 2_1:+14061776 | Msa0196670:three_prime_UTR |
| ATTTGCCATGTATTTGACAA+TGG | 0.595566 | 2_1:-14061781 | None:intergenic |
| TTATGAAGAACATAAGGATG+AGG | 0.600323 | 2_1:+14061655 | Msa0196670:CDS |
| GACCAACAGACAAGTCAGCT+GGG | 0.605256 | 2_1:-14061449 | None:intergenic |
| ATCGAATCGAAGTGAAATTG+GGG | 0.606503 | 2_1:-14059579 | None:intergenic |
| GAAGAACATAAGGATGAGGA+TGG | 0.616176 | 2_1:+14061659 | Msa0196670:CDS |
| TTATCTCAAATTAAGCCTAG+TGG | 0.620682 | 2_1:-14061724 | None:intergenic |
| CAGACAAGTCAGCTGGGACA+AGG | 0.641093 | 2_1:-14061443 | None:intergenic |
| TTTCTTTACATGACCTACAG+TGG | 0.650715 | 2_1:+14061683 | Msa0196670:CDS |
| TTAATGATAACAGCGAAGCG+CGG | 0.668116 | 2_1:+14061954 | Msa0196670:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATATTGAATTGAAATTA+GGG | - | chr2_1:14059535-14059554 | None:intergenic | 10.0% |
| !! | GTTTATATTGAATTGAAATT+AGG | - | chr2_1:14059536-14059555 | None:intergenic | 15.0% |
| !! | ATTAATAATAAATTACCGAA+AGG | - | chr2_1:14059784-14059803 | None:intergenic | 15.0% |
| !! | TATAACAAAGAATAGAAAAT+TGG | - | chr2_1:14060681-14060700 | None:intergenic | 15.0% |
| !!! | TCAATTTTTAATCATGTCTA+AGG | + | chr2_1:14059738-14059757 | Msa0196670:exon | 20.0% |
| !!! | ATTTAGGGTTTTTTACTATA+CGG | + | chr2_1:14059928-14059947 | Msa0196670:intron | 20.0% |
| !!! | TAATGAAGTATTGCTAAATA+TGG | + | chr2_1:14060476-14060495 | Msa0196670:intron | 20.0% |
| !! | TGTTATATAAATTGAGTGTT+AGG | + | chr2_1:14060694-14060713 | Msa0196670:intron | 20.0% |
| !! | ATCTTAATAAAATATATGGC+AGG | - | chr2_1:14061023-14061042 | None:intergenic | 20.0% |
| !! | AATCAGAATTTAACAGAAAA+AGG | + | chr2_1:14061053-14061072 | Msa0196670:intron | 20.0% |
| !!! | TAATCGATGAATTTAGATTT+TGG | + | chr2_1:14061866-14061885 | Msa0196670:three_prime_UTR | 20.0% |
| !! | GAATACAGAATAGTATATAT+AGG | - | chr2_1:14062174-14062193 | None:intergenic | 20.0% |
| !! | ATTGAAATTAGGGTTTGTTT+GGG | - | chr2_1:14059525-14059544 | None:intergenic | 25.0% |
| !! | AATTGAAATTAGGGTTTGTT+TGG | - | chr2_1:14059526-14059545 | None:intergenic | 25.0% |
| ! | ACGGAAAAAGATTAGAAATT+TGG | - | chr2_1:14059682-14059701 | None:intergenic | 25.0% |
| ! | ATTCATCTGATTGAAATTGT+TGG | + | chr2_1:14059888-14059907 | Msa0196670:intron | 25.0% |
| ! | TTCATCTGATTGAAATTGTT+GGG | + | chr2_1:14059889-14059908 | Msa0196670:intron | 25.0% |
| ! | ACTGTGTGATGATTAAATTT+AGG | + | chr2_1:14059912-14059931 | Msa0196670:intron | 25.0% |
| ! | CTGTGTGATGATTAAATTTA+GGG | + | chr2_1:14059913-14059932 | Msa0196670:intron | 25.0% |
| ! | AATTTCATCGAATAACTAAC+AGG | - | chr2_1:14059975-14059994 | None:intergenic | 25.0% |
| ! | TTGCTTATAATAGTGATCAT+AGG | + | chr2_1:14059994-14060013 | Msa0196670:intron | 25.0% |
| ! | TGCTTATAATAGTGATCATA+GGG | + | chr2_1:14059995-14060014 | Msa0196670:intron | 25.0% |
| !! | TTTGAAAACCCTTTGTTTAT+TGG | + | chr2_1:14060312-14060331 | Msa0196670:intron | 25.0% |
| ! | ATTCAAGTCCAATAAACAAA+GGG | - | chr2_1:14060323-14060342 | None:intergenic | 25.0% |
| ! | TATTCAAGTCCAATAAACAA+AGG | - | chr2_1:14060324-14060343 | None:intergenic | 25.0% |
| !! | ACAGTGTTATGTTTTGTATA+TGG | + | chr2_1:14060344-14060363 | Msa0196670:intron | 25.0% |
| ! | CAGGACAAAATAATATTCTT+AGG | - | chr2_1:14060617-14060636 | None:intergenic | 25.0% |
| !! | ATTTTGTCCTGAATTTTGTT+CGG | + | chr2_1:14060626-14060645 | Msa0196670:intron | 25.0% |
| !! | GATTTCTTGAAGATTTTGAA+AGG | + | chr2_1:14060653-14060672 | Msa0196670:intron | 25.0% |
| !! | TCTGTGTTTTGTAATATTGT+TGG | + | chr2_1:14060817-14060836 | Msa0196670:intron | 25.0% |
| !! | TTCTTTTTGCATATTCGATT+TGG | + | chr2_1:14060899-14060918 | Msa0196670:intron | 25.0% |
| !!! | AATCTTGTTTTTTGCCAATT+TGG | + | chr2_1:14061579-14061598 | Msa0196670:intron | 25.0% |
| ! | GTTAATAATCACAACCAAAT+TGG | - | chr2_1:14061596-14061615 | None:intergenic | 25.0% |
| ! | ATCCTTATGTTCTTCATAAA+GGG | - | chr2_1:14061654-14061673 | None:intergenic | 25.0% |
| GATGAAAGACGAAAGAATAA+TGG | - | chr2_1:14059608-14059627 | None:intergenic | 30.0% | |
| TCTGCAAAATAGAAAGAGAA+CGG | - | chr2_1:14059701-14059720 | None:intergenic | 30.0% | |
| CATAGTGAGTATAATCTTAC+AGG | - | chr2_1:14060426-14060445 | None:intergenic | 30.0% | |
| GAAGGTAGTAAAGTATGATA+TGG | + | chr2_1:14060729-14060748 | Msa0196670:intron | 30.0% | |
| ATTGTTGGAAATATGAAGCA+TGG | + | chr2_1:14060832-14060851 | Msa0196670:intron | 30.0% | |
| ! | AGAACATCAATTTTGCATTC+TGG | - | chr2_1:14060883-14060902 | None:intergenic | 30.0% |
| CTAAAGTGACTAGCAATTTA+AGG | - | chr2_1:14060954-14060973 | None:intergenic | 30.0% | |
| !! | TCTGGTAATTTGGTTTGAAA+AGG | + | chr2_1:14061129-14061148 | Msa0196670:intron | 30.0% |
| !! | CTGGTAATTTGGTTTGAAAA+GGG | + | chr2_1:14061130-14061149 | Msa0196670:intron | 30.0% |
| TTCTTCAGATTTGTCCATAT+CGG | + | chr2_1:14061207-14061226 | Msa0196670:intron | 30.0% | |
| !! | TATTCTTTGTGTGTTGCTTT+AGG | + | chr2_1:14061418-14061437 | Msa0196670:intron | 30.0% |
| GCAAAAAACAAGATTTCGTA+TGG | - | chr2_1:14061574-14061593 | None:intergenic | 30.0% | |
| CATCCTTATGTTCTTCATAA+AGG | - | chr2_1:14061655-14061674 | None:intergenic | 30.0% | |
| TTATGAAGAACATAAGGATG+AGG | + | chr2_1:14061655-14061674 | Msa0196670:CDS | 30.0% | |
| TATCTCAAATTAAGCCTAGT+GGG | - | chr2_1:14061726-14061745 | None:intergenic | 30.0% | |
| TTATCTCAAATTAAGCCTAG+TGG | - | chr2_1:14061727-14061746 | None:intergenic | 30.0% | |
| ATTTGCCATGTATTTGACAA+TGG | - | chr2_1:14061784-14061803 | None:intergenic | 30.0% | |
| GATAATGCATGTTTGAATTG+TGG | + | chr2_1:14061888-14061907 | Msa0196670:three_prime_UTR | 30.0% | |
| CGATAAGATCATCTACTTTA+TGG | + | chr2_1:14061922-14061941 | Msa0196670:three_prime_UTR | 30.0% | |
| AATTTGAACTGTTATGTAGC+TGG | + | chr2_1:14062042-14062061 | Msa0196670:three_prime_UTR | 30.0% | |
| ! | ATTAGGGTTTGTTTGGGTTT+GGG | - | chr2_1:14059519-14059538 | None:intergenic | 35.0% |
| ! | AATTAGGGTTTGTTTGGGTT+TGG | - | chr2_1:14059520-14059539 | None:intergenic | 35.0% |
| ATCGAATCGAAGTGAAATTG+GGG | - | chr2_1:14059582-14059601 | None:intergenic | 35.0% | |
| GATCGAATCGAAGTGAAATT+GGG | - | chr2_1:14059583-14059602 | None:intergenic | 35.0% | |
| TGATCGAATCGAAGTGAAAT+TGG | - | chr2_1:14059584-14059603 | None:intergenic | 35.0% | |
| TATTCTTTCGTCTTTCATCG+TGG | + | chr2_1:14059609-14059628 | Msa0196670:intron | 35.0% | |
| ATTCTTTCGTCTTTCATCGT+GGG | + | chr2_1:14059610-14059629 | Msa0196670:intron | 35.0% | |
| TTCAAGACTCAACATCCTTT+CGG | + | chr2_1:14059766-14059785 | Msa0196670:CDS | 35.0% | |
| AATCTTACAGGTACTCTATC+AGG | - | chr2_1:14060414-14060433 | None:intergenic | 35.0% | |
| ATCAAGACCGAACAAAATTC+AGG | - | chr2_1:14060636-14060655 | None:intergenic | 35.0% | |
| AAACCAGTATCAACTCAACA+AGG | - | chr2_1:14060760-14060779 | None:intergenic | 35.0% | |
| ! | TCAATTTTGCATTCTGGTGT+TGG | - | chr2_1:14060877-14060896 | None:intergenic | 35.0% |
| !! | ATATTCGATTTGGCCAAGTA+TGG | + | chr2_1:14060909-14060928 | Msa0196670:intron | 35.0% |
| !! | TATTCGATTTGGCCAAGTAT+GGG | + | chr2_1:14060910-14060929 | Msa0196670:intron | 35.0% |
| GTGACTAGCAATTTAAGGAT+GGG | - | chr2_1:14060949-14060968 | None:intergenic | 35.0% | |
| AGTGACTAGCAATTTAAGGA+TGG | - | chr2_1:14060950-14060969 | None:intergenic | 35.0% | |
| TTAGTGTTAGATTTGTCCTC+TGG | + | chr2_1:14060970-14060989 | Msa0196670:intron | 35.0% | |
| AGTCCAAAGATGTAATGATG+TGG | - | chr2_1:14060998-14061017 | None:intergenic | 35.0% | |
| AATATTAAGCCAAGTCTCTG+CGG | + | chr2_1:14061101-14061120 | Msa0196670:intron | 35.0% | |
| !! | TGCGGATATTTCTGGTAATT+TGG | + | chr2_1:14061119-14061138 | Msa0196670:intron | 35.0% |
| GAATACTGCATATGCATATG+TGG | + | chr2_1:14061152-14061171 | Msa0196670:intron | 35.0% | |
| TTAAACTAGAGTCTCATCTG+GGG | - | chr2_1:14061245-14061264 | None:intergenic | 35.0% | |
| GTTAAACTAGAGTCTCATCT+GGG | - | chr2_1:14061246-14061265 | None:intergenic | 35.0% | |
| TGTTAAACTAGAGTCTCATC+TGG | - | chr2_1:14061247-14061266 | None:intergenic | 35.0% | |
| ! | ACTCTAGTTTAACATCTTGC+TGG | + | chr2_1:14061253-14061272 | Msa0196670:intron | 35.0% |
| ! | CACTGCAAATTTTCATGCTT+TGG | + | chr2_1:14061379-14061398 | Msa0196670:intron | 35.0% |
| ! | TGCAAATTTTCATGCTTTGG+TGG | + | chr2_1:14061382-14061401 | Msa0196670:intron | 35.0% |
| !! | ATGCTTTGGTGGATTCTAAT+TGG | + | chr2_1:14061393-14061412 | Msa0196670:intron | 35.0% |
| ! | CACTGAGCTTAATTCTTTTG+CGG | - | chr2_1:14061491-14061510 | None:intergenic | 35.0% |
| AAAACAAGATTTCGTATGGC+TGG | - | chr2_1:14061570-14061589 | None:intergenic | 35.0% | |
| TGCCCTTTATGAAGAACATA+AGG | + | chr2_1:14061649-14061668 | Msa0196670:CDS | 35.0% | |
| TTTCTTTACATGACCTACAG+TGG | + | chr2_1:14061683-14061702 | Msa0196670:CDS | 35.0% | |
| GAGAGCTATATACAGAAAGA+AGG | - | chr2_1:14061750-14061769 | None:intergenic | 35.0% | |
| ATGTTTGAATTGTGGTTGCT+TGG | + | chr2_1:14061896-14061915 | Msa0196670:three_prime_UTR | 35.0% | |
| GAAAGGATGTTGAGTCTTGA+AGG | - | chr2_1:14059767-14059786 | None:intergenic | 40.0% | |
| GTGATTGATTGTTGCAGTGT+CGG | + | chr2_1:14060157-14060176 | Msa0196670:intron | 40.0% | |
| ! | TAGCGTTCTAAACACATGTG+TGG | - | chr2_1:14060270-14060289 | None:intergenic | 40.0% |
| GTATATGGCAGAAAGAAGAC+AGG | + | chr2_1:14060359-14060378 | Msa0196670:intron | 40.0% | |
| AAATATGGTGTGTTGTGTGC+AGG | + | chr2_1:14060491-14060510 | Msa0196670:intron | 40.0% | |
| !! | CATCCTTGTTGAGTTGATAC+TGG | + | chr2_1:14060754-14060773 | Msa0196670:intron | 40.0% |
| !! | ATTCGATTTGGCCAAGTATG+GGG | + | chr2_1:14060911-14060930 | Msa0196670:intron | 40.0% |
| ATAATACACTGCCCCATACT+TGG | - | chr2_1:14060925-14060944 | None:intergenic | 40.0% | |
| GCACCACATCATTACATCTT+TGG | + | chr2_1:14060992-14061011 | Msa0196670:intron | 40.0% | |
| GGTTAAGTTAACTGCCGATA+TGG | - | chr2_1:14061224-14061243 | None:intergenic | 40.0% | |
| GAAAATCAGACGATCAAGCT+TGG | + | chr2_1:14061313-14061332 | Msa0196670:intron | 40.0% | |
| AATTAAGCTCAGTGCAGAGA+AGG | + | chr2_1:14061497-14061516 | Msa0196670:CDS | 40.0% | |
| GAAGAACATAAGGATGAGGA+TGG | + | chr2_1:14061659-14061678 | Msa0196670:CDS | 40.0% | |
| GCAGTCCATTGTCAAATACA+TGG | + | chr2_1:14061776-14061795 | Msa0196670:three_prime_UTR | 40.0% | |
| TTAATGATAACAGCGAAGCG+CGG | + | chr2_1:14061954-14061973 | Msa0196670:three_prime_UTR | 40.0% | |
| TCTGACACCTCTTCAATTCG+AGG | + | chr2_1:14060236-14060255 | Msa0196670:intron | 45.0% | |
| ACCTCTTCAATTCGAGGTGT+TGG | + | chr2_1:14060242-14060261 | Msa0196670:intron | 45.0% | |
| ACCAACACCTCGAATTGAAG+AGG | - | chr2_1:14060246-14060265 | None:intergenic | 45.0% | |
| GTTAGGCTTGTAGCTAGTGA+AGG | + | chr2_1:14060711-14060730 | Msa0196670:intron | 45.0% | |
| ! | TTTGCATTCTGGTGTTGGAG+TGG | - | chr2_1:14060872-14060891 | None:intergenic | 45.0% |
| ! | ATGTAATGATGTGGTGCCAG+AGG | - | chr2_1:14060989-14061008 | None:intergenic | 45.0% |
| CAGAAATATCCGCAGAGACT+TGG | - | chr2_1:14061113-14061132 | None:intergenic | 45.0% | |
| CAAGTCTCTGCGGATATTTC+TGG | + | chr2_1:14061111-14061130 | Msa0196670:intron | 45.0% | |
| GAAAACACTCTACCTCCAAC+TGG | + | chr2_1:14061537-14061556 | Msa0196670:CDS | 45.0% | |
| ATGGCTGGATACTTACCAGT+TGG | - | chr2_1:14061555-14061574 | None:intergenic | 45.0% | |
| ATCAGAGCAGCTGTAACAAC+AGG | - | chr2_1:14061626-14061645 | None:intergenic | 45.0% | |
| !! | AAAGGTGTTCTCTCCACTGT+AGG | - | chr2_1:14061699-14061718 | None:intergenic | 45.0% |
| TACAGTGGAGAGAACACCTT+TGG | + | chr2_1:14061698-14061717 | Msa0196670:CDS | 45.0% | |
| TTAAGCCTAGTGGGAACCAA+AGG | - | chr2_1:14061717-14061736 | None:intergenic | 45.0% | |
| !! | AAAAATCTTAATAAAATATA+TGG | - | chr2_1:14061027-14061046 | None:intergenic | 5.0% |
| GTGTCAGATGTCGACACATG+TGG | - | chr2_1:14060224-14060243 | None:intergenic | 50.0% | |
| GTGTTGTGTGCAGGTGATTG+TGG | + | chr2_1:14060500-14060519 | Msa0196670:intron | 50.0% | |
| CAGGTGATTGTGGAGAAAGC+TGG | + | chr2_1:14060510-14060529 | Msa0196670:intron | 50.0% | |
| GACCAACAGACAAGTCAGCT+GGG | - | chr2_1:14061452-14061471 | None:intergenic | 50.0% | |
| TGACCAACAGACAAGTCAGC+TGG | - | chr2_1:14061453-14061472 | None:intergenic | 50.0% | |
| GCTGGATACTTACCAGTTGG+AGG | - | chr2_1:14061552-14061571 | None:intergenic | 50.0% | |
| AGAGCAGCTGTAACAACAGG+AGG | - | chr2_1:14061623-14061642 | None:intergenic | 50.0% | |
| ! | GAACACCTTTGGTTCCCACT+AGG | + | chr2_1:14061709-14061728 | Msa0196670:CDS | 50.0% |
| CAGACAAGTCAGCTGGGACA+AGG | - | chr2_1:14061446-14061465 | None:intergenic | 55.0% | |
| !! | GTCCCAGCTGACTTGTCTGT+TGG | + | chr2_1:14061447-14061466 | Msa0196670:CDS | 55.0% |
| TGATAACAGCGAAGCGCGGT+TGG | + | chr2_1:14061958-14061977 | Msa0196670:three_prime_UTR | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 14059503 | 14062219 | 14059503 | ID=Msa0196670;Name=Msa0196670 |
| chr2_1 | mRNA | 14059503 | 14062219 | 14059503 | ID=Msa0196670-mRNA-1;Parent=Msa0196670;Name=Msa0196670-mRNA-1;_AED=0.05;_eAED=0.05;_QI=156|1|1|1|0.8|0.83|6|489|119 |
| chr2_1 | exon | 14059503 | 14059627 | 14059503 | ID=Msa0196670-mRNA-1:exon:6021;Parent=Msa0196670-mRNA-1 |
| chr2_1 | exon | 14059720 | 14059787 | 14059720 | ID=Msa0196670-mRNA-1:exon:6022;Parent=Msa0196670-mRNA-1 |
| chr2_1 | exon | 14060370 | 14060425 | 14060370 | ID=Msa0196670-mRNA-1:exon:6023;Parent=Msa0196670-mRNA-1 |
| chr2_1 | exon | 14060513 | 14060565 | 14060513 | ID=Msa0196670-mRNA-1:exon:6024;Parent=Msa0196670-mRNA-1 |
| chr2_1 | exon | 14061440 | 14061558 | 14061440 | ID=Msa0196670-mRNA-1:exon:6025;Parent=Msa0196670-mRNA-1 |
| chr2_1 | exon | 14061636 | 14062219 | 14061636 | ID=Msa0196670-mRNA-1:exon:6026;Parent=Msa0196670-mRNA-1 |
| chr2_1 | five_prime_UTR | 14059503 | 14059627 | 14059503 | ID=Msa0196670-mRNA-1:five_prime_utr;Parent=Msa0196670-mRNA-1 |
| chr2_1 | five_prime_UTR | 14059720 | 14059750 | 14059720 | ID=Msa0196670-mRNA-1:five_prime_utr;Parent=Msa0196670-mRNA-1 |
| chr2_1 | CDS | 14059751 | 14059787 | 14059751 | ID=Msa0196670-mRNA-1:cds;Parent=Msa0196670-mRNA-1 |
| chr2_1 | CDS | 14060370 | 14060425 | 14060370 | ID=Msa0196670-mRNA-1:cds;Parent=Msa0196670-mRNA-1 |
| chr2_1 | CDS | 14060513 | 14060565 | 14060513 | ID=Msa0196670-mRNA-1:cds;Parent=Msa0196670-mRNA-1 |
| chr2_1 | CDS | 14061440 | 14061558 | 14061440 | ID=Msa0196670-mRNA-1:cds;Parent=Msa0196670-mRNA-1 |
| chr2_1 | CDS | 14061636 | 14061730 | 14061636 | ID=Msa0196670-mRNA-1:cds;Parent=Msa0196670-mRNA-1 |
| chr2_1 | three_prime_UTR | 14061731 | 14062219 | 14061731 | ID=Msa0196670-mRNA-1:three_prime_utr;Parent=Msa0196670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
