Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278070 | XP_024627522.1 | 97.222 | 72 | 1 | 1 | 1 | 72 | 1 | 71 | 3.05e-40 | 136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278070 | A0A396GJM0 | 97.222 | 72 | 1 | 1 | 1 | 72 | 1 | 71 | 1.46e-40 | 136 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072570 | Msa1278070 | 0.803824 | 2.898307e-49 | -8.615850e-47 |
| Msa0077320 | Msa1278070 | 0.800744 | 1.248446e-48 | -8.615850e-47 |
| Msa0094480 | Msa1278070 | 0.801197 | 1.008615e-48 | -8.615850e-47 |
| Msa0604960 | Msa1278070 | 0.802042 | 6.767138e-49 | -8.615850e-47 |
| Msa0705800 | Msa1278070 | 0.803560 | 3.288795e-49 | -8.615850e-47 |
| Msa0822580 | Msa1278070 | 0.835155 | 1.978468e-56 | -8.615850e-47 |
| Msa0175000 | Msa1278070 | 0.803833 | 2.886112e-49 | -8.615850e-47 |
| Msa1236980 | Msa1278070 | 0.972971 | 1.208542e-135 | -8.615850e-47 |
| Msa1278070 | Msa1374240 | 0.805138 | 1.542644e-49 | -8.615850e-47 |
| Msa1278070 | Msa1386200 | 0.803460 | 3.448777e-49 | -8.615850e-47 |
| Msa1278070 | Msa1463580 | 0.854234 | 1.409600e-61 | -8.615850e-47 |
| Msa1082170 | Msa1278070 | 0.820372 | 7.100577e-53 | -8.615850e-47 |
| Msa1115590 | Msa1278070 | 0.816838 | 4.498457e-52 | -8.615850e-47 |
| Msa1126520 | Msa1278070 | 0.805413 | 1.351319e-49 | -8.615850e-47 |
| Msa0915540 | Msa1278070 | 0.803400 | 3.549711e-49 | -8.615850e-47 |
| Msa0929790 | Msa1278070 | 0.815400 | 9.425597e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278070 | MtrunA17_Chr8g0347621 | 97.222 | 72 | 1 | 1 | 1 | 72 | 1 | 71 | 2.80e-44 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278070 | AT3G07568.1 | 46.575 | 73 | 33 | 2 | 1 | 72 | 1 | 68 | 2.97e-19 | 73.9 |
Find 33 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCGTTTGGAAGGATCTT+TGG | 0.226923 | 8_3:+14126832 | Msa1278070:CDS |
| AGGAGTATGATTCTGCAAAT+TGG | 0.272002 | 8_3:-14126931 | None:intergenic |
| GTTTATCAAAATTTACTATT+CGG | 0.330684 | 8_3:+14131000 | Msa1278070:three_prime_UTR |
| TTCTTTCTTCACTCAGTATG+AGG | 0.361211 | 8_3:-14130973 | None:intergenic |
| CAGGTTGAAAGTTAGATATT+CGG | 0.363053 | 8_3:+14130805 | Msa1278070:intron |
| TTTCGTTTGGAAGGATCTTT+GGG | 0.373510 | 8_3:+14126833 | Msa1278070:CDS |
| TTGTTAAACAGAAATAAATA+TGG | 0.375111 | 8_3:-14131106 | None:intergenic |
| AAAGATCCTTCCAAACGAAA+TGG | 0.386067 | 8_3:-14126830 | None:intergenic |
| CTGTTGTTTCCCATTTCGTT+TGG | 0.389744 | 8_3:+14126820 | Msa1278070:CDS |
| AAAGCAGGGTAAGAATTCTA+AGG | 0.427254 | 8_3:-14130926 | None:intergenic |
| CGATTGCTATGGTTCAGCTT+AGG | 0.442953 | 8_3:+14126780 | Msa1278070:CDS |
| TGATCGTGATTTGAAGAAAC+AGG | 0.448751 | 8_3:-14126951 | None:intergenic |
| TGTTTCTTCAAATCACGATC+AGG | 0.465250 | 8_3:+14126953 | Msa1278070:CDS |
| AAGATCCTTCCAAACGAAAT+GGG | 0.484074 | 8_3:-14126829 | None:intergenic |
| TCAGTATGAGGGAATCTCTC+GGG | 0.498802 | 8_3:-14130961 | None:intergenic |
| TGTTTCCCATTTCGTTTGGA+AGG | 0.499824 | 8_3:+14126824 | Msa1278070:CDS |
| GGAAACAACAGCAGCTGAAG+TGG | 0.537618 | 8_3:-14126808 | None:intergenic |
| AAGCTCTGTTGTTCTACGGC+GGG | 0.538954 | 8_3:+14126729 | Msa1278070:five_prime_UTR |
| TCTTTCTTCACTCAGTATGA+GGG | 0.551713 | 8_3:-14130972 | None:intergenic |
| TGATTCGAACTCGATTGCTA+TGG | 0.560773 | 8_3:+14126769 | Msa1278070:CDS |
| CTCAGTATGAGGGAATCTCT+CGG | 0.565270 | 8_3:-14130962 | None:intergenic |
| TTGGTTCACAATGTTTGTAG+AGG | 0.576669 | 8_3:+14130870 | Msa1278070:three_prime_UTR |
| GGATCGAAGAGCTTTATGCT+TGG | 0.577563 | 8_3:+14130851 | Msa1278070:three_prime_UTR |
| TCACCGTGTTCGTGTGTTGA+CGG | 0.582909 | 8_3:-14126707 | None:intergenic |
| CATAATAAAACAGATTGTTG+AGG | 0.600418 | 8_3:+14130900 | Msa1278070:three_prime_UTR |
| GAAGCTCTGTTGTTCTACGG+CGG | 0.622478 | 8_3:+14126728 | Msa1278070:five_prime_UTR |
| CCGTGTTCGTGTGTTGACGG+TGG | 0.636085 | 8_3:-14126704 | None:intergenic |
| GGTGAAGCTCTGTTGTTCTA+CGG | 0.639334 | 8_3:+14126725 | Msa1278070:five_prime_UTR |
| CAGTATGAGGGAATCTCTCG+GGG | 0.640741 | 8_3:-14130960 | None:intergenic |
| ATAAAGCTCTTCGATCCTTG+TGG | 0.641680 | 8_3:-14130845 | None:intergenic |
| TGGATTCAGATAACTCGCAC+AGG | 0.643307 | 8_3:-14126684 | None:intergenic |
| CCACCGTCAACACACGAACA+CGG | 0.664390 | 8_3:+14126704 | Msa1278070:five_prime_UTR |
| AAATTGTTGAGTCACGTGAG+AGG | 0.677158 | 8_3:-14126874 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACTAATAATTTCTATTT+CGG | - | chr8_3:14128724-14128743 | None:intergenic | 10.0% |
| !!! | ATATGAATTTTACTTAATAA+AGG | + | chr8_3:14129310-14129329 | Msa1278070:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr8_3:14128473-14128492 | Msa1278070:intron | 100.0% |
| !!! | ATTGATTTAATTGACAATAT+AGG | + | chr8_3:14127069-14127088 | Msa1278070:intron | 15.0% |
| !!! | ATCAATAACAATTTCAATTT+TGG | - | chr8_3:14127102-14127121 | None:intergenic | 15.0% |
| !!! | TATTGATAATATTATGAAAG+AGG | + | chr8_3:14127115-14127134 | Msa1278070:intron | 15.0% |
| !!! | ATGATATTAGTTATTTTGTT+AGG | + | chr8_3:14127546-14127565 | Msa1278070:intron | 15.0% |
| !!! | TTTATTTATACCAAGTTTTT+TGG | + | chr8_3:14128119-14128138 | Msa1278070:intron | 15.0% |
| !! | TCAAAAAATTGCAAAATTAT+TGG | - | chr8_3:14128595-14128614 | None:intergenic | 15.0% |
| !! | TTAAGATTGTTAGAATTAAT+TGG | + | chr8_3:14129067-14129086 | Msa1278070:intron | 15.0% |
| !! | TTATCTTGTTAGAATTAATT+AGG | + | chr8_3:14129128-14129147 | Msa1278070:intron | 15.0% |
| !! | AATAATAAGTCTCATTAAAT+AGG | + | chr8_3:14129256-14129275 | Msa1278070:intron | 15.0% |
| !! | GTTTATCAAAATTTACTATT+CGG | + | chr8_3:14131000-14131019 | Msa1278070:three_prime_UTR | 15.0% |
| !! | TTGTTAAACAGAAATAAATA+TGG | - | chr8_3:14131109-14131128 | None:intergenic | 15.0% |
| !! | TAAACATTAAACACATTGTT+AGG | - | chr8_3:14127226-14127245 | None:intergenic | 20.0% |
| !! | ATGTGTTTAATGTTTATAAG+TGG | + | chr8_3:14127230-14127249 | Msa1278070:intron | 20.0% |
| !! | TGTGTTTAATGTTTATAAGT+GGG | + | chr8_3:14127231-14127250 | Msa1278070:intron | 20.0% |
| !!! | TACTATTTAAGAATTTTGGT+CGG | - | chr8_3:14127291-14127310 | None:intergenic | 20.0% |
| !!! | CTGATACTATTTAAGAATTT+TGG | - | chr8_3:14127295-14127314 | None:intergenic | 20.0% |
| !! | ATATACTCGTTAGTAATAAA+AGG | + | chr8_3:14128268-14128287 | Msa1278070:intron | 20.0% |
| !! | AAAATTGCAAAATTATTGGT+TGG | - | chr8_3:14128591-14128610 | None:intergenic | 20.0% |
| !!! | TTTTTAAGTTAGTTACAAGT+TGG | + | chr8_3:14129094-14129113 | Msa1278070:intron | 20.0% |
| !!! | TCAGTTTATTTTTCTTTTTG+TGG | + | chr8_3:14129216-14129235 | Msa1278070:intron | 20.0% |
| !!! | CAGTTTATTTTTCTTTTTGT+GGG | + | chr8_3:14129217-14129236 | Msa1278070:intron | 20.0% |
| !! | GTCTAGATAAAAATAACTAA+CGG | + | chr8_3:14129338-14129357 | Msa1278070:intron | 20.0% |
| !! | TTCTTACTATTAGATAAATG+AGG | + | chr8_3:14129534-14129553 | Msa1278070:intron | 20.0% |
| !! | TGATACTCATTAGTAATAAA+AGG | + | chr8_3:14129972-14129991 | Msa1278070:intron | 20.0% |
| !!! | TTTTCATGTACTATAAGATT+AGG | + | chr8_3:14130005-14130024 | Msa1278070:intron | 20.0% |
| !! | TTACATGATGAATTAATCAA+TGG | - | chr8_3:14130267-14130286 | None:intergenic | 20.0% |
| !!! | ACTATTTTTTTTTCTACATC+TGG | + | chr8_3:14130396-14130415 | Msa1278070:intron | 20.0% |
| !!! | ACTATTTAAGAATTTTGGTC+GGG | - | chr8_3:14127290-14127309 | None:intergenic | 25.0% |
| ! | CTGAAAATGTGTTTATAAGT+GGG | + | chr8_3:14127421-14127440 | Msa1278070:intron | 25.0% |
| !! | ACTCTAAAAATCTTGCTATA+TGG | - | chr8_3:14127502-14127521 | None:intergenic | 25.0% |
| !! | TAGGTTTAGTTAGCTTAATT+AGG | + | chr8_3:14127565-14127584 | Msa1278070:intron | 25.0% |
| !! | AGGTTTAGTTAGCTTAATTA+GGG | + | chr8_3:14127566-14127585 | Msa1278070:intron | 25.0% |
| ! | GAGAAAAATAAATTGAGAGA+AGG | - | chr8_3:14127699-14127718 | None:intergenic | 25.0% |
| ! | AGACTTATTATTGAGAAAGA+CGG | - | chr8_3:14127736-14127755 | None:intergenic | 25.0% |
| ! | AATAATAAGTCTCTCCAAAT+TGG | + | chr8_3:14127744-14127763 | Msa1278070:intron | 25.0% |
| !!! | GCTTAGTATTTTGGTTTATA+AGG | + | chr8_3:14128293-14128312 | Msa1278070:intron | 25.0% |
| !!! | GTATTTTGGTTTATAAGGTT+TGG | + | chr8_3:14128298-14128317 | Msa1278070:intron | 25.0% |
| !!! | TATTTGGTTTGCATCAATTA+AGG | + | chr8_3:14128341-14128360 | Msa1278070:intron | 25.0% |
| ! | GGGATAAATTTATGATAAAC+TGG | + | chr8_3:14128430-14128449 | Msa1278070:intron | 25.0% |
| !!! | TTTTTTTTTCATAGAACAGC+TGG | + | chr8_3:14128510-14128529 | Msa1278070:intron | 25.0% |
| ! | AGTATAATAAAATTTCTCGC+TGG | + | chr8_3:14128617-14128636 | Msa1278070:intron | 25.0% |
| !! | AGTGAGAAAATTGATAATCT+AGG | + | chr8_3:14128691-14128710 | Msa1278070:intron | 25.0% |
| ! | GAGCTATGTGTTTATAAATT+AGG | + | chr8_3:14128815-14128834 | Msa1278070:intron | 25.0% |
| ! | CTGATACCAACTTAAAATTT+GGG | - | chr8_3:14128846-14128865 | None:intergenic | 25.0% |
| ! | TCTGATACCAACTTAAAATT+TGG | - | chr8_3:14128847-14128866 | None:intergenic | 25.0% |
| ! | ATAAGATATAGCCTGAAAAT+GGG | + | chr8_3:14128975-14128994 | Msa1278070:intron | 25.0% |
| !! | CTCTTTAAAAAGAGAATTTC+TGG | - | chr8_3:14129399-14129418 | None:intergenic | 25.0% |
| !!! | TCTTTTTAAAGAGAGTAAGT+GGG | + | chr8_3:14129406-14129425 | Msa1278070:intron | 25.0% |
| ! | ACTATTAGATAAATGAGGAA+AGG | + | chr8_3:14129539-14129558 | Msa1278070:intron | 25.0% |
| ! | ATGATTGTTGATGTGAATAT+TGG | + | chr8_3:14129816-14129835 | Msa1278070:intron | 25.0% |
| !! | ACACTTTGAAAATATTTAGC+AGG | + | chr8_3:14129898-14129917 | Msa1278070:intron | 25.0% |
| ! | GATTAGGAATTGATATATCA+TGG | + | chr8_3:14130021-14130040 | Msa1278070:intron | 25.0% |
| !! | TGATATATCATGGACAATTT+TGG | + | chr8_3:14130031-14130050 | Msa1278070:intron | 25.0% |
| !! | GATATATCATGGACAATTTT+GGG | + | chr8_3:14130032-14130051 | Msa1278070:intron | 25.0% |
| !!! | AAATGGTTTTGCTAAACATT+AGG | + | chr8_3:14130222-14130241 | Msa1278070:intron | 25.0% |
| ! | ATGAATTAATCAATGGCATT+TGG | - | chr8_3:14130260-14130279 | None:intergenic | 25.0% |
| !!! | TGTTCTTGATAGTTCTAATT+TGG | + | chr8_3:14130746-14130765 | Msa1278070:intron | 25.0% |
| !!! | CTCAACAATCTGTTTTATTA+TGG | - | chr8_3:14130902-14130921 | None:intergenic | 25.0% |
| ! | CATAATAAAACAGATTGTTG+AGG | + | chr8_3:14130900-14130919 | Msa1278070:three_prime_UTR | 25.0% |
| !! | AAGCTTTTGTTAACTTCATA+AGG | - | chr8_3:14131070-14131089 | None:intergenic | 25.0% |
| AATAATAAGAATGCAACCCT+AGG | - | chr8_3:14127021-14127040 | None:intergenic | 30.0% | |
| !! | AACTCTACCATTTTAGGAAT+AGG | + | chr8_3:14127176-14127195 | Msa1278070:intron | 30.0% |
| CTTAACACCTATTCCTAAAA+TGG | - | chr8_3:14127186-14127205 | None:intergenic | 30.0% | |
| TATAAGTGGGAGTTATAAAC+CGG | + | chr8_3:14127244-14127263 | Msa1278070:intron | 30.0% | |
| !! | AGTTATAAACCGGTTTTGTA+GGG | + | chr8_3:14127254-14127273 | Msa1278070:intron | 30.0% |
| AAATAGTATCAGACCCTATT+AGG | + | chr8_3:14127303-14127322 | Msa1278070:intron | 30.0% | |
| AGGCTATATCTCATATAATG+TGG | - | chr8_3:14127403-14127422 | None:intergenic | 30.0% | |
| ! | CCACTTATAAACACATTTTC+AGG | - | chr8_3:14127423-14127442 | None:intergenic | 30.0% |
| CCTGAAAATGTGTTTATAAG+TGG | + | chr8_3:14127420-14127439 | Msa1278070:intron | 30.0% | |
| ! | CAACTTTGTAGGTTTGATTT+AGG | + | chr8_3:14127467-14127486 | Msa1278070:intron | 30.0% |
| !!! | GCAAGATTTTTAGAGTTAGT+TGG | + | chr8_3:14127506-14127525 | Msa1278070:intron | 30.0% |
| TGTATCCTACACTAATTGTT+GGG | + | chr8_3:14127602-14127621 | Msa1278070:intron | 30.0% | |
| AACTTGATTACAATGAGTGT+AGG | - | chr8_3:14127646-14127665 | None:intergenic | 30.0% | |
| ATGAGACTTGCATGATTTAT+TGG | + | chr8_3:14127770-14127789 | Msa1278070:intron | 30.0% | |
| TAAATTCCACTAAATCATGC+TGG | - | chr8_3:14127847-14127866 | None:intergenic | 30.0% | |
| TCTTATTGGACAAATGAAGA+AGG | + | chr8_3:14127938-14127957 | Msa1278070:intron | 30.0% | |
| CTTATTGGACAAATGAAGAA+GGG | + | chr8_3:14127939-14127958 | Msa1278070:intron | 30.0% | |
| !!! | CATTAGTTTTCTTAGTCGAT+AGG | - | chr8_3:14128003-14128022 | None:intergenic | 30.0% |
| CAGAAAATAACAAGAATCCT+AGG | - | chr8_3:14128046-14128065 | None:intergenic | 30.0% | |
| !! | GTTATTTTCTGCATAAGCTT+AGG | + | chr8_3:14128055-14128074 | Msa1278070:intron | 30.0% |
| !!! | AAGTTTTTTGGTTATCGATG+CGG | + | chr8_3:14128131-14128150 | Msa1278070:intron | 30.0% |
| ! | TAAAAGGCAGCTTAGTATTT+TGG | + | chr8_3:14128284-14128303 | Msa1278070:intron | 30.0% |
| GCTATATCCAGGAAAATATT+TGG | + | chr8_3:14128325-14128344 | Msa1278070:intron | 30.0% | |
| ! | ATGCAAACCAAATATTTTCC+TGG | - | chr8_3:14128335-14128354 | None:intergenic | 30.0% |
| AGTGAGATTAAAGAGAATGT+AGG | - | chr8_3:14128549-14128568 | None:intergenic | 30.0% | |
| ! | TTGCAAAATTATTGGTTGGT+TGG | - | chr8_3:14128587-14128606 | None:intergenic | 30.0% |
| !! | GTCTAACCCAAATTTTAAGT+TGG | + | chr8_3:14128837-14128856 | Msa1278070:intron | 30.0% |
| GGCTATATCTTATCTGATTT+GGG | - | chr8_3:14128968-14128987 | None:intergenic | 30.0% | |
| AGGCTATATCTTATCTGATT+TGG | - | chr8_3:14128969-14128988 | None:intergenic | 30.0% | |
| GATAAGATATAGCCTGAAAA+TGG | + | chr8_3:14128974-14128993 | Msa1278070:intron | 30.0% | |
| ! | CAACTTATAAACCCATTTTC+AGG | - | chr8_3:14128989-14129008 | None:intergenic | 30.0% |
| ! | CTGAAAATGGGTTTATAAGT+TGG | + | chr8_3:14128987-14129006 | Msa1278070:intron | 30.0% |
| AAAACTGACATGAAAAGTGA+GGG | - | chr8_3:14129019-14129038 | None:intergenic | 30.0% | |
| !! | CTTTTCATGTCAGTTTTGTA+TGG | + | chr8_3:14129022-14129041 | Msa1278070:intron | 30.0% |
| AAGAGACTCACATGATTTAT+TGG | + | chr8_3:14129282-14129301 | Msa1278070:intron | 30.0% | |
| !! | CTCTTTTTAAAGAGAGTAAG+TGG | + | chr8_3:14129405-14129424 | Msa1278070:intron | 30.0% |
| !! | CTTTTTAAAGAGAGTAAGTG+GGG | + | chr8_3:14129407-14129426 | Msa1278070:intron | 30.0% |
| GACATTGCATAATATATGCA+GGG | - | chr8_3:14129454-14129473 | None:intergenic | 30.0% | |
| !! | TTGATTTTAACCTCACCTAT+TGG | + | chr8_3:14129592-14129611 | Msa1278070:intron | 30.0% |
| TCTTACGAATCTTAACCAAT+AGG | - | chr8_3:14129610-14129629 | None:intergenic | 30.0% | |
| !!! | CTTATGTGTGAATTTTGACT+CGG | + | chr8_3:14129660-14129679 | Msa1278070:intron | 30.0% |
| !!! | TGGTCTTTTGAAATGGAATA+TGG | + | chr8_3:14129766-14129785 | Msa1278070:intron | 30.0% |
| !!! | GGTCTTTTGAAATGGAATAT+GGG | + | chr8_3:14129767-14129786 | Msa1278070:intron | 30.0% |
| CCATGAATATGACAATATGT+CGG | - | chr8_3:14129852-14129871 | None:intergenic | 30.0% | |
| ACATATTGTCATATTCATGG+TGG | + | chr8_3:14129852-14129871 | Msa1278070:intron | 30.0% | |
| TTCAAAGTGTAAGATGCAAA+TGG | - | chr8_3:14129888-14129907 | None:intergenic | 30.0% | |
| AATGAGTATCAGTAAACCAA+TGG | - | chr8_3:14129963-14129982 | None:intergenic | 30.0% | |
| !!! | TTTTGGGTTTGCATCAATTA+AGG | + | chr8_3:14130048-14130067 | Msa1278070:intron | 30.0% |
| GCATCAATTAAGGTGAATAT+TGG | + | chr8_3:14130058-14130077 | Msa1278070:intron | 30.0% | |
| TCTGAATCCATATGATTGAA+AGG | + | chr8_3:14130143-14130162 | Msa1278070:intron | 30.0% | |
| GGAATGTCTGAAAAAACATT+AGG | + | chr8_3:14130172-14130191 | Msa1278070:intron | 30.0% | |
| TAGCAAAACCATTTCTAACA+CGG | - | chr8_3:14130216-14130235 | None:intergenic | 30.0% | |
| TCATCATGTAATTGCCTAAA+TGG | + | chr8_3:14130276-14130295 | Msa1278070:intron | 30.0% | |
| ! | TCCTATGAATCATGTTCTTT+TGG | + | chr8_3:14130354-14130373 | Msa1278070:intron | 30.0% |
| ACCAAAAGAACATGATTCAT+AGG | - | chr8_3:14130358-14130377 | None:intergenic | 30.0% | |
| AACATCTAGTACAAGATCTT+TGG | + | chr8_3:14130456-14130475 | Msa1278070:intron | 30.0% | |
| CAGTATGACTAAAAAGAATG+TGG | - | chr8_3:14130482-14130501 | None:intergenic | 30.0% | |
| ACATTGAGTACTTAAACATC+TGG | + | chr8_3:14130523-14130542 | Msa1278070:intron | 30.0% | |
| AACATCTGGAAATACTAATC+TGG | + | chr8_3:14130537-14130556 | Msa1278070:intron | 30.0% | |
| AAAACTAGACTTTACCATAG+AGG | + | chr8_3:14130589-14130608 | Msa1278070:intron | 30.0% | |
| AAACTAGACTTTACCATAGA+GGG | + | chr8_3:14130590-14130609 | Msa1278070:intron | 30.0% | |
| ! | AAACCAGTAATGTTTTCTGA+TGG | + | chr8_3:14130652-14130671 | Msa1278070:intron | 30.0% |
| TTACCATCAGAAAACATTAC+TGG | - | chr8_3:14130658-14130677 | None:intergenic | 30.0% | |
| !! | TGATAGTTCTAATTTGGAAG+TGG | + | chr8_3:14130752-14130771 | Msa1278070:intron | 30.0% |
| ! | ATGATGTTTTTCCTTCTCTT+TGG | + | chr8_3:14130782-14130801 | Msa1278070:intron | 30.0% |
| ! | CAGGTTGAAAGTTAGATATT+CGG | + | chr8_3:14130805-14130824 | Msa1278070:intron | 30.0% |
| AAGATCCTTCCAAACGAAAT+GGG | - | chr8_3:14126832-14126851 | None:intergenic | 35.0% | |
| AAAGATCCTTCCAAACGAAA+TGG | - | chr8_3:14126833-14126852 | None:intergenic | 35.0% | |
| ATTTCGTTTGGAAGGATCTT+TGG | + | chr8_3:14126832-14126851 | Msa1278070:CDS | 35.0% | |
| TTTCGTTTGGAAGGATCTTT+GGG | + | chr8_3:14126833-14126852 | Msa1278070:CDS | 35.0% | |
| ! | AGGAGTATGATTCTGCAAAT+TGG | - | chr8_3:14126934-14126953 | None:intergenic | 35.0% |
| TGATCGTGATTTGAAGAAAC+AGG | - | chr8_3:14126954-14126973 | None:intergenic | 35.0% | |
| TGTTTCTTCAAATCACGATC+AGG | + | chr8_3:14126953-14126972 | Msa1278070:CDS | 35.0% | |
| ! | TTAGTGGTTGGTGCAATTAA+GGG | - | chr8_3:14126984-14127003 | None:intergenic | 35.0% |
| ! | ATTAGTGGTTGGTGCAATTA+AGG | - | chr8_3:14126985-14127004 | None:intergenic | 35.0% |
| TAATTCAACACTACCTTCCT+AGG | + | chr8_3:14127001-14127020 | Msa1278070:intron | 35.0% | |
| AATTCAACACTACCTTCCTA+GGG | + | chr8_3:14127002-14127021 | Msa1278070:intron | 35.0% | |
| !! | GAGTTATAAACCGGTTTTGT+AGG | + | chr8_3:14127253-14127272 | Msa1278070:intron | 35.0% |
| TCAAACCTACAAAGTTGACT+TGG | - | chr8_3:14127464-14127483 | None:intergenic | 35.0% | |
| TTAGTTGGAACTGTCAAAGT+TGG | + | chr8_3:14127521-14127540 | Msa1278070:intron | 35.0% | |
| CTGTATCCTACACTAATTGT+TGG | + | chr8_3:14127601-14127620 | Msa1278070:intron | 35.0% | |
| ! | GCAAGTCTCATTTTCCAATT+TGG | - | chr8_3:14127761-14127780 | None:intergenic | 35.0% |
| ! | GCATCGATAACCAAAAAACT+TGG | - | chr8_3:14128132-14128151 | None:intergenic | 35.0% |
| AGTAGCAGTATAAGGCTTAT+GGG | - | chr8_3:14128217-14128236 | None:intergenic | 35.0% | |
| CATGTTATGCAGTAAACCAA+TGG | - | chr8_3:14128248-14128267 | None:intergenic | 35.0% | |
| GATAACAGAAACTTGTGTCT+AGG | + | chr8_3:14128368-14128387 | Msa1278070:intron | 35.0% | |
| TGCGCTGAATTCTATGATTA+GGG | + | chr8_3:14128453-14128472 | Msa1278070:intron | 35.0% | |
| TATCAGAGTCTATCCAAGAT+TGG | + | chr8_3:14128860-14128879 | Msa1278070:intron | 35.0% | |
| CAAAACTGACATGAAAAGTG+AGG | - | chr8_3:14129020-14129039 | None:intergenic | 35.0% | |
| !! | CAGTTTTGTATGGTTGAGTT+AGG | + | chr8_3:14129032-14129051 | Msa1278070:intron | 35.0% |
| ATTAGGATCGCTATATGAAG+TGG | + | chr8_3:14129145-14129164 | Msa1278070:intron | 35.0% | |
| !!! | TTTTTTGTCAAGTAGCCTAG+CGG | + | chr8_3:14129373-14129392 | Msa1278070:intron | 35.0% |
| GGACATTGCATAATATATGC+AGG | - | chr8_3:14129455-14129474 | None:intergenic | 35.0% | |
| ! | TGAGTTTAGCTTAGTTGGTA+GGG | - | chr8_3:14129476-14129495 | None:intergenic | 35.0% |
| ! | ATGAGTTTAGCTTAGTTGGT+AGG | - | chr8_3:14129477-14129496 | None:intergenic | 35.0% |
| TACCAACTAAGCTAAACTCA+TGG | + | chr8_3:14129476-14129495 | Msa1278070:intron | 35.0% | |
| ACCAACTAAGCTAAACTCAT+GGG | + | chr8_3:14129477-14129496 | Msa1278070:intron | 35.0% | |
| !! | TAAATGAGGAAAGGTGTTGA+TGG | + | chr8_3:14129548-14129567 | Msa1278070:intron | 35.0% |
| AAGTCACTGTTTCAAGAACT+TGG | - | chr8_3:14129732-14129751 | None:intergenic | 35.0% | |
| TTCTTGAAACAGTGACTTAG+AGG | + | chr8_3:14129734-14129753 | Msa1278070:intron | 35.0% | |
| CCGACATATTGTCATATTCA+TGG | + | chr8_3:14129849-14129868 | Msa1278070:intron | 35.0% | |
| TAAGGTGAATATTGGTCAAG+TGG | + | chr8_3:14130066-14130085 | Msa1278070:intron | 35.0% | |
| AAGGTGAATATTGGTCAAGT+GGG | + | chr8_3:14130067-14130086 | Msa1278070:intron | 35.0% | |
| CACTGTTCCTTTCAATCATA+TGG | - | chr8_3:14130153-14130172 | None:intergenic | 35.0% | |
| CATATGATTGAAAGGAACAG+TGG | + | chr8_3:14130151-14130170 | Msa1278070:intron | 35.0% | |
| AAGAAAGACCGTGTTAGAAA+TGG | + | chr8_3:14130205-14130224 | Msa1278070:intron | 35.0% | |
| ! | GATGAAAGTGGTGTCTTTTA+TGG | - | chr8_3:14130336-14130355 | None:intergenic | 35.0% |
| CATGATTCATAGGATGAAAG+TGG | - | chr8_3:14130348-14130367 | None:intergenic | 35.0% | |
| TCAAAACGTATCACACTTGA+AGG | + | chr8_3:14130562-14130581 | Msa1278070:intron | 35.0% | |
| TTAATATGTGCTACCCTCTA+TGG | - | chr8_3:14130606-14130625 | None:intergenic | 35.0% | |
| !! | CATTACTGGTTTAGTCTAGA+TGG | - | chr8_3:14130644-14130663 | None:intergenic | 35.0% |
| TGAGAGTTAGAGAGAGAATT+TGG | + | chr8_3:14130682-14130701 | Msa1278070:intron | 35.0% | |
| GAGAGTTAGAGAGAGAATTT+GGG | + | chr8_3:14130683-14130702 | Msa1278070:intron | 35.0% | |
| TTGGTTCACAATGTTTGTAG+AGG | + | chr8_3:14130870-14130889 | Msa1278070:three_prime_UTR | 35.0% | |
| AAAGCAGGGTAAGAATTCTA+AGG | - | chr8_3:14130929-14130948 | None:intergenic | 35.0% | |
| TCTTTCTTCACTCAGTATGA+GGG | - | chr8_3:14130975-14130994 | None:intergenic | 35.0% | |
| TTCTTTCTTCACTCAGTATG+AGG | - | chr8_3:14130976-14130995 | None:intergenic | 35.0% | |
| TGATTCGAACTCGATTGCTA+TGG | + | chr8_3:14126769-14126788 | Msa1278070:CDS | 40.0% | |
| !! | CTGTTGTTTCCCATTTCGTT+TGG | + | chr8_3:14126820-14126839 | Msa1278070:CDS | 40.0% |
| TGTTTCCCATTTCGTTTGGA+AGG | + | chr8_3:14126824-14126843 | Msa1278070:CDS | 40.0% | |
| AAATTGTTGAGTCACGTGAG+AGG | - | chr8_3:14126877-14126896 | None:intergenic | 40.0% | |
| ! | GGTAGTGTTGAATTAGTGGT+TGG | - | chr8_3:14126996-14127015 | None:intergenic | 40.0% |
| ! | GGAAGGTAGTGTTGAATTAG+TGG | - | chr8_3:14127000-14127019 | None:intergenic | 40.0% |
| ATAAGAATGCAACCCTAGGA+AGG | - | chr8_3:14127017-14127036 | None:intergenic | 40.0% | |
| ! | CATGCGAACTCTACCATTTT+AGG | + | chr8_3:14127170-14127189 | Msa1278070:intron | 40.0% |
| ACCTTCCAAGTCAACTTTGT+AGG | + | chr8_3:14127456-14127475 | Msa1278070:intron | 40.0% | |
| !! | ACCTACAAAGTTGACTTGGA+AGG | - | chr8_3:14127460-14127479 | None:intergenic | 40.0% |
| AGAGACCCAACAATTAGTGT+AGG | - | chr8_3:14127610-14127629 | None:intergenic | 40.0% | |
| ATGAGACCAGCATGATTTAG+TGG | + | chr8_3:14127838-14127857 | Msa1278070:intron | 40.0% | |
| ! | CCAATAAGAAGAGTGCAAAC+AGG | - | chr8_3:14127927-14127946 | None:intergenic | 40.0% |
| CCTGTTTGCACTCTTCTTAT+TGG | + | chr8_3:14127924-14127943 | Msa1278070:intron | 40.0% | |
| !! | CAAATGAAGAAGGGTGTCTA+TGG | + | chr8_3:14127948-14127967 | Msa1278070:intron | 40.0% |
| ! | GTTTTCTTAGTCGATAGGTG+AGG | - | chr8_3:14127998-14128017 | None:intergenic | 40.0% |
| AATCCTAGGAGACATGGAAA+TGG | - | chr8_3:14128032-14128051 | None:intergenic | 40.0% | |
| AACAAGAATCCTAGGAGACA+TGG | - | chr8_3:14128038-14128057 | None:intergenic | 40.0% | |
| !!! | GCATCACTAGTCTTTTGCAA+TGG | + | chr8_3:14128080-14128099 | Msa1278070:intron | 40.0% |
| !!! | TAGTCTTTTGCAATGGACTG+TGG | + | chr8_3:14128087-14128106 | Msa1278070:intron | 40.0% |
| CGGATACTGGTATTCTGATA+CGG | + | chr8_3:14128151-14128170 | Msa1278070:intron | 40.0% | |
| ATAAGGCTTATGGGACTTTC+TGG | - | chr8_3:14128208-14128227 | None:intergenic | 40.0% | |
| GAGTAGCAGTATAAGGCTTA+TGG | - | chr8_3:14128218-14128237 | None:intergenic | 40.0% | |
| TGGTAAGGAGTAGCAGTATA+AGG | - | chr8_3:14128225-14128244 | None:intergenic | 40.0% | |
| GTTATGCAGTAAACCAATGG+TGG | - | chr8_3:14128245-14128264 | None:intergenic | 40.0% | |
| ! | GGTTTGGAATTGCTATATCC+AGG | + | chr8_3:14128314-14128333 | Msa1278070:intron | 40.0% |
| ACAGAAACTTGTGTCTAGGT+AGG | + | chr8_3:14128372-14128391 | Msa1278070:intron | 40.0% | |
| TTGTGTCTAGGTAGGTAAGT+GGG | + | chr8_3:14128380-14128399 | Msa1278070:intron | 40.0% | |
| TAGGTAAGTGGGAAGAAAAC+TGG | + | chr8_3:14128391-14128410 | Msa1278070:intron | 40.0% | |
| AGGTAAGTGGGAAGAAAACT+GGG | + | chr8_3:14128392-14128411 | Msa1278070:intron | 40.0% | |
| AACTGGGTTCTTGTGAGAAA+AGG | + | chr8_3:14128408-14128427 | Msa1278070:intron | 40.0% | |
| ACTGGGTTCTTGTGAGAAAA+GGG | + | chr8_3:14128409-14128428 | Msa1278070:intron | 40.0% | |
| GTGCGCTGAATTCTATGATT+AGG | + | chr8_3:14128452-14128471 | Msa1278070:intron | 40.0% | |
| GCGCTGAATTCTATGATTAG+GGG | + | chr8_3:14128454-14128473 | Msa1278070:intron | 40.0% | |
| CGCTGAATTCTATGATTAGG+GGG | + | chr8_3:14128455-14128474 | Msa1278070:intron | 40.0% | |
| GCTGAATTCTATGATTAGGG+GGG | + | chr8_3:14128456-14128475 | Msa1278070:intron | 40.0% | |
| CTGAATTCTATGATTAGGGG+GGG | + | chr8_3:14128457-14128476 | Msa1278070:intron | 40.0% | |
| TGAATTCTATGATTAGGGGG+GGG | + | chr8_3:14128458-14128477 | Msa1278070:intron | 40.0% | |
| ! | GGTTGGTTGGTACAATTGAA+GGG | - | chr8_3:14128574-14128593 | None:intergenic | 40.0% |
| ! | TGGTTGGTTGGTACAATTGA+AGG | - | chr8_3:14128575-14128594 | None:intergenic | 40.0% |
| GGGAGTCTAAACAATAGCAA+AGG | - | chr8_3:14128785-14128804 | None:intergenic | 40.0% | |
| CACATAGCTCAATACAGTGT+GGG | - | chr8_3:14128805-14128824 | None:intergenic | 40.0% | |
| ACACATAGCTCAATACAGTG+TGG | - | chr8_3:14128806-14128825 | None:intergenic | 40.0% | |
| TTGCATAATATATGCAGGGC+CGG | - | chr8_3:14129450-14129469 | None:intergenic | 40.0% | |
| CCAACTAAGCTAAACTCATG+GGG | + | chr8_3:14129478-14129497 | Msa1278070:intron | 40.0% | |
| CGAATCTTAACCAATAGGTG+AGG | - | chr8_3:14129605-14129624 | None:intergenic | 40.0% | |
| !! | GCATCTCTGGTCTTTTGAAA+TGG | + | chr8_3:14129759-14129778 | Msa1278070:intron | 40.0% |
| ! | GTCATATTCATGGTGGAAAC+TGG | + | chr8_3:14129859-14129878 | Msa1278070:intron | 40.0% |
| TCAGTAAACCAATGGTGGTA+GGG | - | chr8_3:14129955-14129974 | None:intergenic | 40.0% | |
| ATCAGTAAACCAATGGTGGT+AGG | - | chr8_3:14129956-14129975 | None:intergenic | 40.0% | |
| GAGTATCAGTAAACCAATGG+TGG | - | chr8_3:14129960-14129979 | None:intergenic | 40.0% | |
| TAGAGAGAGAATTTGGGAGA+TGG | + | chr8_3:14130689-14130708 | Msa1278070:intron | 40.0% | |
| ! | TGTTTTTCCTTCTCTTTGGC+AGG | + | chr8_3:14130786-14130805 | Msa1278070:intron | 40.0% |
| ATAAAGCTCTTCGATCCTTG+TGG | - | chr8_3:14130848-14130867 | None:intergenic | 40.0% | |
| GGGAGACAGATAAAAAAGCA+GGG | - | chr8_3:14130943-14130962 | None:intergenic | 40.0% | |
| TGGATTCAGATAACTCGCAC+AGG | - | chr8_3:14126687-14126706 | None:intergenic | 45.0% | |
| GGTGAAGCTCTGTTGTTCTA+CGG | + | chr8_3:14126725-14126744 | Msa1278070:five_prime_UTR | 45.0% | |
| CGATTGCTATGGTTCAGCTT+AGG | + | chr8_3:14126780-14126799 | Msa1278070:CDS | 45.0% | |
| CTGACTCAACCCTACAAAAC+CGG | - | chr8_3:14127266-14127285 | None:intergenic | 45.0% | |
| ATGTGTTTATAAGTGGGCGC+CGG | + | chr8_3:14127427-14127446 | Msa1278070:intron | 45.0% | |
| ! | TGACTTGGAAGGTTAGAGAC+CGG | - | chr8_3:14127449-14127468 | None:intergenic | 45.0% |
| !! | AAGAAGGGTGTCTATGGTTG+TGG | + | chr8_3:14127954-14127973 | Msa1278070:intron | 45.0% |
| ACTCCATTTCCATGTCTCCT+AGG | + | chr8_3:14128026-14128045 | Msa1278070:intron | 45.0% | |
| TTGGTTATCGATGCGGATAC+TGG | + | chr8_3:14128138-14128157 | Msa1278070:intron | 45.0% | |
| ! | TTATGGGACTTTCTGGTCTG+AGG | - | chr8_3:14128201-14128220 | None:intergenic | 45.0% |
| GCAGTAAACCAATGGTGGTA+AGG | - | chr8_3:14128240-14128259 | None:intergenic | 45.0% | |
| CTTGTGTCTAGGTAGGTAAG+TGG | + | chr8_3:14128379-14128398 | Msa1278070:intron | 45.0% | |
| CTGGGTTCTTGTGAGAAAAG+GGG | + | chr8_3:14128410-14128429 | Msa1278070:intron | 45.0% | |
| GAATTCTATGATTAGGGGGG+GGG | + | chr8_3:14128459-14128478 | Msa1278070:intron | 45.0% | |
| AATTCTATGATTAGGGGGGG+GGG | + | chr8_3:14128460-14128479 | Msa1278070:intron | 45.0% | |
| AATTTCTCGCTGGACATGTC+AGG | + | chr8_3:14128627-14128646 | Msa1278070:intron | 45.0% | |
| GAGTCTATCCAAGATTGGTG+AGG | + | chr8_3:14128865-14128884 | Msa1278070:intron | 45.0% | |
| !! | ACACTTGCTATCGTACCACT+TGG | + | chr8_3:14128888-14128907 | Msa1278070:intron | 45.0% |
| !! | CACTTGCTATCGTACCACTT+GGG | + | chr8_3:14128889-14128908 | Msa1278070:intron | 45.0% |
| !! | AAAGAGAATTTCTGGCCGCT+AGG | - | chr8_3:14129391-14129410 | None:intergenic | 45.0% |
| ! | AAGAGAGTAAGTGGGGTGTT+CGG | + | chr8_3:14129414-14129433 | Msa1278070:intron | 45.0% |
| TGCATAATATATGCAGGGCC+GGG | - | chr8_3:14129449-14129468 | None:intergenic | 45.0% | |
| ! | CCCCATGAGTTTAGCTTAGT+TGG | - | chr8_3:14129481-14129500 | None:intergenic | 45.0% |
| !! | AGGAAAGGTGTTGATGGTTG+TGG | + | chr8_3:14129554-14129573 | Msa1278070:intron | 45.0% |
| !!! | GTGTGAATTTTGACTCGGTG+TGG | + | chr8_3:14129665-14129684 | Msa1278070:intron | 45.0% |
| !! | TGACTTAGAGGAAGCATCTC+TGG | + | chr8_3:14129746-14129765 | Msa1278070:intron | 45.0% |
| AGTAAACCAATGGTGGTAGG+GGG | - | chr8_3:14129953-14129972 | None:intergenic | 45.0% | |
| CAGTAAACCAATGGTGGTAG+GGG | - | chr8_3:14129954-14129973 | None:intergenic | 45.0% | |
| TGGTCAAGTGGGAAGATAAC+TGG | + | chr8_3:14130078-14130097 | Msa1278070:intron | 45.0% | |
| GGTCAAGTGGGAAGATAACT+GGG | + | chr8_3:14130079-14130098 | Msa1278070:intron | 45.0% | |
| ! | CTGGGTTCTGGTGAAAAAAG+TGG | + | chr8_3:14130097-14130116 | Msa1278070:intron | 45.0% |
| TTCCATTAGGTGGGCCATTT+AGG | - | chr8_3:14130293-14130312 | None:intergenic | 45.0% | |
| TAAATGGCCCACCTAATGGA+AGG | + | chr8_3:14130292-14130311 | Msa1278070:intron | 45.0% | |
| AAATGGCCCACCTAATGGAA+GGG | + | chr8_3:14130293-14130312 | Msa1278070:intron | 45.0% | |
| CTTATGCCCTTCCATTAGGT+GGG | - | chr8_3:14130302-14130321 | None:intergenic | 45.0% | |
| ! | AAGCCTTATGCCCTTCCATT+AGG | - | chr8_3:14130306-14130325 | None:intergenic | 45.0% |
| CTTTCAACCTGCCAAAGAGA+AGG | - | chr8_3:14130796-14130815 | None:intergenic | 45.0% | |
| ! | CCTTGTGGAAAACGTTTTGC+TGG | - | chr8_3:14130833-14130852 | None:intergenic | 45.0% |
| ! | CCAGCAAAACGTTTTCCACA+AGG | + | chr8_3:14130830-14130849 | Msa1278070:three_prime_UTR | 45.0% |
| ! | GGATCGAAGAGCTTTATGCT+TGG | + | chr8_3:14130851-14130870 | Msa1278070:three_prime_UTR | 45.0% |
| GGGGAGACAGATAAAAAAGC+AGG | - | chr8_3:14130944-14130963 | None:intergenic | 45.0% | |
| TCAGTATGAGGGAATCTCTC+GGG | - | chr8_3:14130964-14130983 | None:intergenic | 45.0% | |
| CTCAGTATGAGGGAATCTCT+CGG | - | chr8_3:14130965-14130984 | None:intergenic | 45.0% | |
| !! | TGTAAAATAAAAATATTAAA+GGG | - | chr8_3:14130506-14130525 | None:intergenic | 5.0% |
| !! | ATGTAAAATAAAAATATTAA+AGG | - | chr8_3:14130507-14130526 | None:intergenic | 5.0% |
| !! | AAATGAAAAAAATTAATATT+TGG | - | chr8_3:14131031-14131050 | None:intergenic | 5.0% |
| TCACCGTGTTCGTGTGTTGA+CGG | - | chr8_3:14126710-14126729 | None:intergenic | 50.0% | |
| GAAGCTCTGTTGTTCTACGG+CGG | + | chr8_3:14126728-14126747 | Msa1278070:five_prime_UTR | 50.0% | |
| AAGCTCTGTTGTTCTACGGC+GGG | + | chr8_3:14126729-14126748 | Msa1278070:five_prime_UTR | 50.0% | |
| GGAAACAACAGCAGCTGAAG+TGG | - | chr8_3:14126811-14126830 | None:intergenic | 50.0% | |
| CACGTCAGATGTTCGATCCT+TGG | + | chr8_3:14127352-14127371 | Msa1278070:intron | 50.0% | |
| GTCAGATGTTCGATCCTTGG+CGG | + | chr8_3:14127355-14127374 | Msa1278070:intron | 50.0% | |
| TCAGATGTTCGATCCTTGGC+GGG | + | chr8_3:14127356-14127375 | Msa1278070:intron | 50.0% | |
| CTGCTACTCCTTACCACCAT+TGG | + | chr8_3:14128229-14128248 | Msa1278070:intron | 50.0% | |
| ATTCTATGATTAGGGGGGGG+GGG | + | chr8_3:14128461-14128480 | Msa1278070:intron | 50.0% | |
| GCAAGTGTCCTCACCAATCT+TGG | - | chr8_3:14128876-14128895 | None:intergenic | 50.0% | |
| ! | AGAGAGTAAGTGGGGTGTTC+GGG | + | chr8_3:14129415-14129434 | Msa1278070:intron | 50.0% |
| GCATAATATATGCAGGGCCG+GGG | - | chr8_3:14129448-14129467 | None:intergenic | 50.0% | |
| !!! | AATTTTGACTCGGTGTGGCG+TGG | + | chr8_3:14129670-14129689 | Msa1278070:intron | 50.0% |
| !!! | ATTTTGACTCGGTGTGGCGT+GGG | + | chr8_3:14129671-14129690 | Msa1278070:intron | 50.0% |
| GTGGGAAGATAACTGGGTTC+TGG | + | chr8_3:14130085-14130104 | Msa1278070:intron | 50.0% | |
| TGCCTAAATGGCCCACCTAA+TGG | + | chr8_3:14130288-14130307 | Msa1278070:intron | 50.0% | |
| CCTTATGCCCTTCCATTAGG+TGG | - | chr8_3:14130303-14130322 | None:intergenic | 50.0% | |
| ! | CCACCTAATGGAAGGGCATA+AGG | + | chr8_3:14130300-14130319 | Msa1278070:intron | 50.0% |
| CAGTATGAGGGAATCTCTCG+GGG | - | chr8_3:14130963-14130982 | None:intergenic | 50.0% | |
| CCACCGTCAACACACGAACA+CGG | + | chr8_3:14126704-14126723 | Msa1278070:five_prime_UTR | 55.0% | |
| CCAGAGCGAGTGGCCTAATA+GGG | - | chr8_3:14127319-14127338 | None:intergenic | 55.0% | |
| TCCAGAGCGAGTGGCCTAAT+AGG | - | chr8_3:14127320-14127339 | None:intergenic | 55.0% | |
| CATCTGACGTGTGACCCTAG+TGG | - | chr8_3:14127343-14127362 | None:intergenic | 55.0% | |
| CAACAAACACAGTCCCGCCA+AGG | - | chr8_3:14127372-14127391 | None:intergenic | 55.0% | |
| TTCTATGATTAGGGGGGGGG+GGG | + | chr8_3:14128462-14128481 | Msa1278070:intron | 55.0% | |
| ! | CATCTAGAGCGTGACCCAAG+TGG | - | chr8_3:14128906-14128925 | None:intergenic | 55.0% |
| ! | CGCTCTAGATGCTCGATCCT+TGG | + | chr8_3:14128915-14128934 | Msa1278070:intron | 55.0% |
| GATGCTCGATCCTTGGTGAG+CGG | + | chr8_3:14128922-14128941 | Msa1278070:intron | 55.0% | |
| ATGCTCGATCCTTGGTGAGC+GGG | + | chr8_3:14128923-14128942 | Msa1278070:intron | 55.0% | |
| ! | GAGAGTAAGTGGGGTGTTCG+GGG | + | chr8_3:14129416-14129435 | Msa1278070:intron | 55.0% |
| ! | GTGGTAGGGGGTAGCACTTT+TGG | - | chr8_3:14129941-14129960 | None:intergenic | 55.0% |
| ! | CCGTGTTCGTGTGTTGACGG+TGG | - | chr8_3:14126707-14126726 | None:intergenic | 60.0% |
| CCCTATTAGGCCACTCGCTC+TGG | + | chr8_3:14127316-14127335 | Msa1278070:intron | 60.0% | |
| ! | CCACTCGCTCTGGACCACTA+GGG | + | chr8_3:14127326-14127345 | Msa1278070:intron | 60.0% |
| TCTATGATTAGGGGGGGGGG+GGG | + | chr8_3:14128463-14128482 | Msa1278070:intron | 60.0% | |
| TCTCGCTGGACATGTCAGGC+TGG | + | chr8_3:14128631-14128650 | Msa1278070:intron | 60.0% | |
| CTCGCTGGACATGTCAGGCT+GGG | + | chr8_3:14128632-14128651 | Msa1278070:intron | 60.0% | |
| TCGCTGGACATGTCAGGCTG+GGG | + | chr8_3:14128633-14128652 | Msa1278070:intron | 60.0% | |
| CAACACACACCCGCTCACCA+AGG | - | chr8_3:14128935-14128954 | None:intergenic | 60.0% | |
| GGTGTTCGGGGTTTGAACCC+CGG | + | chr8_3:14129428-14129447 | Msa1278070:intron | 60.0% | |
| GTGCTACCCCCTACCACCAT+TGG | + | chr8_3:14129944-14129963 | Msa1278070:intron | 60.0% | |
| ! | GCCACTCGCTCTGGACCACT+AGG | + | chr8_3:14127325-14127344 | Msa1278070:intron | 65.0% |
| CCCTAGTGGTCCAGAGCGAG+TGG | - | chr8_3:14127329-14127348 | None:intergenic | 65.0% | |
| CTATGATTAGGGGGGGGGGG+GGG | + | chr8_3:14128464-14128483 | Msa1278070:intron | 65.0% | |
| TATGATTAGGGGGGGGGGGG+GGG | + | chr8_3:14128465-14128484 | Msa1278070:intron | 65.0% | |
| !! | TGACTCGGTGTGGCGTGGGA+TGG | + | chr8_3:14129675-14129694 | Msa1278070:intron | 65.0% |
| ATGATTAGGGGGGGGGGGGG+GGG | + | chr8_3:14128466-14128485 | Msa1278070:intron | 70.0% | |
| TGATTAGGGGGGGGGGGGGG+GGG | + | chr8_3:14128467-14128486 | Msa1278070:intron | 75.0% | |
| ! | GATTAGGGGGGGGGGGGGGG+GGG | + | chr8_3:14128468-14128487 | Msa1278070:intron | 80.0% |
| ! | ATTAGGGGGGGGGGGGGGGG+GGG | + | chr8_3:14128469-14128488 | Msa1278070:intron | 80.0% |
| ! | TTAGGGGGGGGGGGGGGGGG+GGG | + | chr8_3:14128470-14128489 | Msa1278070:intron | 85.0% |
| ! | TAGGGGGGGGGGGGGGGGGG+GGG | + | chr8_3:14128471-14128490 | Msa1278070:intron | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | + | chr8_3:14128472-14128491 | Msa1278070:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 14126677 | 14131190 | 14126677 | ID=Msa1278070;Name=Msa1278070 |
| chr8_3 | mRNA | 14126677 | 14131190 | 14126677 | ID=Msa1278070-mRNA-1;Parent=Msa1278070;Name=Msa1278070-mRNA-1;_AED=0.03;_eAED=0.03;_QI=91|1|1|1|1|1|2|371|72 |
| chr8_3 | exon | 14126677 | 14126974 | 14126677 | ID=Msa1278070-mRNA-1:exon:5526;Parent=Msa1278070-mRNA-1 |
| chr8_3 | exon | 14130808 | 14131190 | 14130808 | ID=Msa1278070-mRNA-1:exon:5527;Parent=Msa1278070-mRNA-1 |
| chr8_3 | five_prime_UTR | 14126677 | 14126767 | 14126677 | ID=Msa1278070-mRNA-1:five_prime_utr;Parent=Msa1278070-mRNA-1 |
| chr8_3 | CDS | 14126768 | 14126974 | 14126768 | ID=Msa1278070-mRNA-1:cds;Parent=Msa1278070-mRNA-1 |
| chr8_3 | CDS | 14130808 | 14130819 | 14130808 | ID=Msa1278070-mRNA-1:cds;Parent=Msa1278070-mRNA-1 |
| chr8_3 | three_prime_UTR | 14130820 | 14131190 | 14130820 | ID=Msa1278070-mRNA-1:three_prime_utr;Parent=Msa1278070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
