Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0175000 | XP_003592049.1 | 100.000 | 152 | 0 | 0 | 1 | 152 | 1 | 152 | 5.57e-108 | 314 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0175000 | sp|P34788|RS18_ARATH | 92.763 | 152 | 11 | 0 | 1 | 152 | 1 | 152 | 1.93e-104 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0175000 | B7FMJ8 | 100.000 | 152 | 0 | 0 | 1 | 152 | 1 | 152 | 2.66e-108 | 314 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027590 | Msa0175000 | 0.839322 | 1.698052e-57 | -8.615850e-47 |
| Msa0072570 | Msa0175000 | 0.812783 | 3.563376e-51 | -8.615850e-47 |
| Msa0075350 | Msa0175000 | 0.827109 | 1.875447e-54 | -8.615850e-47 |
| Msa0077320 | Msa0175000 | 0.802492 | 5.468261e-49 | -8.615850e-47 |
| Msa0122550 | Msa0175000 | 0.815889 | 7.335869e-52 | -8.615850e-47 |
| Msa0166970 | Msa0175000 | 0.810371 | 1.191609e-50 | -8.615850e-47 |
| Msa0175000 | Msa0192300 | 0.810979 | 8.802634e-51 | -8.615850e-47 |
| Msa0175000 | Msa0195030 | 0.810753 | 9.855585e-51 | -8.615850e-47 |
| Msa0175000 | Msa0301250 | 0.810420 | 1.162872e-50 | -8.615850e-47 |
| Msa0175000 | Msa0313060 | 0.802473 | 5.517508e-49 | -8.615850e-47 |
| Msa0175000 | Msa0426090 | 0.801748 | 7.779338e-49 | -8.615850e-47 |
| Msa0175000 | Msa0472480 | 0.809236 | 2.090314e-50 | -8.615850e-47 |
| Msa0175000 | Msa0481520 | 0.814155 | 1.779619e-51 | -8.615850e-47 |
| Msa0175000 | Msa0573550 | 0.815485 | 9.026813e-52 | -8.615850e-47 |
| Msa0175000 | Msa0619230 | 0.801755 | 7.751605e-49 | -8.615850e-47 |
| Msa0175000 | Msa0758420 | 0.841617 | 4.262741e-58 | -8.615850e-47 |
| Msa0175000 | Msa0786650 | 0.838205 | 3.301412e-57 | -8.615850e-47 |
| Msa0175000 | Msa0788380 | 0.845418 | 4.112018e-59 | -8.615850e-47 |
| Msa0175000 | Msa0822580 | 0.800714 | 1.266303e-48 | -8.615850e-47 |
| Msa0175000 | Msa0861320 | 0.807346 | 5.287074e-50 | -8.615850e-47 |
| Msa0175000 | Msa0929700 | 0.804113 | 2.524585e-49 | -8.615850e-47 |
| Msa0175000 | Msa0929790 | 0.851572 | 8.134280e-61 | -8.615850e-47 |
| Msa0175000 | Msa1037290 | 0.803914 | 2.776940e-49 | -8.615850e-47 |
| Msa0175000 | Msa1041680 | 0.830085 | 3.580846e-55 | -8.615850e-47 |
| Msa0175000 | Msa1082170 | 0.819041 | 1.430006e-52 | -8.615850e-47 |
| Msa0175000 | Msa1164150 | 0.802908 | 4.488290e-49 | -8.615850e-47 |
| Msa0175000 | Msa1166570 | 0.829279 | 5.625045e-55 | -8.615850e-47 |
| Msa0175000 | Msa1218170 | 0.839180 | 1.848706e-57 | -8.615850e-47 |
| Msa0175000 | Msa1236980 | 0.800808 | 1.211322e-48 | -8.615850e-47 |
| Msa0175000 | Msa1258540 | 0.809284 | 2.041506e-50 | -8.615850e-47 |
| Msa0175000 | Msa1278070 | 0.803833 | 2.886112e-49 | -8.615850e-47 |
| Msa0175000 | Msa1364110 | 0.805961 | 1.036887e-49 | -8.615850e-47 |
| Msa0175000 | Msa1368920 | 0.806444 | 8.201353e-50 | -8.615850e-47 |
| Msa0175000 | Msa1390760 | 0.801662 | 8.100571e-49 | -8.615850e-47 |
| Msa0175000 | Msa1463580 | 0.813046 | 3.120213e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0175000 | MtrunA17_Chr1g0201521 | 100.000 | 152 | 0 | 0 | 1 | 152 | 1 | 152 | 5.12e-112 | 314 |
| Msa0175000 | MtrunA17_Chr1g0201481 | 100.000 | 152 | 0 | 0 | 1 | 152 | 1 | 152 | 5.12e-112 | 314 |
| Msa0175000 | MtrunA17_Chr6g0467091 | 98.684 | 152 | 2 | 0 | 1 | 152 | 1 | 152 | 5.31e-111 | 311 |
| Msa0175000 | MtrunA17_Chr5g0409931 | 94.286 | 105 | 6 | 0 | 36 | 140 | 12 | 116 | 2.72e-70 | 207 |
| Msa0175000 | MtrunA17_Chr5g0409851 | 93.258 | 89 | 6 | 0 | 52 | 140 | 1 | 89 | 3.41e-58 | 176 |
| Msa0175000 | MtrunA17_Chr5g0409921 | 94.382 | 89 | 5 | 0 | 52 | 140 | 1 | 89 | 4.30e-58 | 175 |
| Msa0175000 | MtrunA17_Chr5g0409871 | 94.382 | 89 | 5 | 0 | 52 | 140 | 1 | 89 | 5.53e-58 | 175 |
| Msa0175000 | MtrunA17_Chr5g0409881 | 94.382 | 89 | 5 | 0 | 52 | 140 | 1 | 89 | 5.53e-58 | 175 |
| Msa0175000 | MtrunA17_Chr5g0409861 | 94.382 | 89 | 5 | 0 | 52 | 140 | 1 | 89 | 5.53e-58 | 175 |
| Msa0175000 | MtrunA17_Chr5g0409911 | 94.382 | 89 | 5 | 0 | 52 | 140 | 1 | 89 | 5.53e-58 | 175 |
| Msa0175000 | MtrunA17_Chr5g0409891 | 94.382 | 89 | 5 | 0 | 52 | 140 | 1 | 89 | 5.53e-58 | 175 |
| Msa0175000 | MtrunA17_Chr5g0409901 | 95.714 | 70 | 3 | 0 | 52 | 121 | 1 | 70 | 1.12e-43 | 138 |
| Msa0175000 | MtrunA17_Chr4g0006461 | 76.562 | 64 | 14 | 1 | 67 | 129 | 9 | 72 | 3.44e-28 | 99.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0175000 | AT4G09800.1 | 92.763 | 152 | 11 | 0 | 1 | 152 | 1 | 152 | 1.97e-105 | 298 |
| Msa0175000 | AT1G34030.1 | 92.763 | 152 | 11 | 0 | 1 | 152 | 1 | 152 | 1.97e-105 | 298 |
| Msa0175000 | AT1G22780.1 | 92.763 | 152 | 11 | 0 | 1 | 152 | 1 | 152 | 1.97e-105 | 298 |
Find 52 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAAGTTGAGAGATGATT+TGG | 0.279609 | 1_4:-60778807 | Msa0175000:CDS |
| CAACTTCATGTCGAGTTGAT+TGG | 0.309472 | 1_4:+60778820 | None:intergenic |
| CGTCCGCAGTTAGGTTAAAA+TGG | 0.345502 | 1_4:-60779367 | Msa0175000:intron |
| CTTAAGGCTGTATGTCCCTC+TGG | 0.359154 | 1_4:+60784184 | None:intergenic |
| CGGCGACTAGTTGCCGCTTA+AGG | 0.370833 | 1_4:+60784168 | None:intergenic |
| ACCGGGGTTTGAGGCACTAC+TGG | 0.376368 | 1_4:-60777807 | Msa0175000:CDS |
| TTAAGCGTGATGTCCTGTTT+TGG | 0.377769 | 1_4:-60777710 | Msa0175000:exon |
| TCCCCTGCGGCCTGTAGTCT+TGG | 0.394682 | 1_4:+60777759 | None:intergenic |
| TTTCATATACCGAGTTTGTA+TGG | 0.407920 | 1_4:-60777644 | Msa0175000:three_prime_UTR |
| CCGGGGTTTGAGGCACTACT+GGG | 0.411270 | 1_4:-60777806 | Msa0175000:CDS |
| AAAATCCTCCGTCCGCAGTT+AGG | 0.418193 | 1_4:-60779376 | Msa0175000:five_prime_UTR |
| AATCATCTAATCTCCAAAAC+AGG | 0.431449 | 1_4:+60777697 | None:intergenic |
| TTCTGTTATGCAGTAATCAC+CGG | 0.438670 | 1_4:-60777825 | Msa0175000:intron |
| ATACCACCATTCAACTAATC+AGG | 0.439185 | 1_4:+60777566 | None:intergenic |
| TACTGGGGCCTTCGTGTTCG+TGG | 0.449083 | 1_4:-60777790 | Msa0175000:CDS |
| GTGTTGAACACAAATGTTGA+TGG | 0.456259 | 1_4:-60779228 | Msa0175000:CDS |
| TGATTGAGGTCATTGCGAAC+TGG | 0.463060 | 1_4:+60779193 | None:intergenic |
| GTTCGCAATGACCTCAATCA+AGG | 0.484324 | 1_4:-60779190 | Msa0175000:CDS |
| CAAGGATGGCAAATTCTCTC+AGG | 0.484690 | 1_4:-60778849 | Msa0175000:CDS |
| ATGACCTCAATCAAGGGTAT+TGG | 0.493197 | 1_4:-60779183 | Msa0175000:CDS |
| GTCAATTCAAGGTTCCAGAT+TGG | 0.495981 | 1_4:-60778895 | Msa0175000:CDS |
| CAAGTGCCTGATTAGTTGAA+TGG | 0.501343 | 1_4:-60777572 | Msa0175000:three_prime_UTR |
| TGCGAATCCTCGTCAATTCA+AGG | 0.503849 | 1_4:-60778906 | Msa0175000:CDS |
| CCCAGTAGTGCCTCAAACCC+CGG | 0.505879 | 1_4:+60777806 | None:intergenic |
| TGGAGAGACTCAAGAAGATC+CGG | 0.512286 | 1_4:-60778787 | Msa0175000:intron |
| CGCATTCTCAAGTGCCCAGA+GGG | 0.514100 | 1_4:-60784199 | Msa0175000:five_prime_UTR |
| GAACAGAAAGAAGGATTACA+AGG | 0.525479 | 1_4:-60778867 | Msa0175000:CDS |
| GCAGTAATCACCGGGGTTTG+AGG | 0.529690 | 1_4:-60777816 | Msa0175000:intron |
| TGATGTGTTATAGTCTTTGG+TGG | 0.546379 | 1_4:-60779280 | Msa0175000:intron |
| TGAATTGAGTGCTGCAGAGT+TGG | 0.553099 | 1_4:-60778948 | Msa0175000:CDS |
| TTAAGGCTGTATGTCCCTCT+GGG | 0.555170 | 1_4:+60784185 | None:intergenic |
| AGAAAGAAGGATTACAAGGA+TGG | 0.565673 | 1_4:-60778863 | Msa0175000:CDS |
| GGTCAGCATACCAAGACTAC+AGG | 0.569467 | 1_4:-60777769 | Msa0175000:CDS |
| TACCAAGACTACAGGCCGCA+GGG | 0.580402 | 1_4:-60777761 | Msa0175000:CDS |
| CCTACCAATACCCTTGATTG+AGG | 0.590405 | 1_4:+60779179 | None:intergenic |
| ATACCAAGACTACAGGCCGC+AGG | 0.594524 | 1_4:-60777762 | Msa0175000:CDS |
| TCTGTTATGCAGTAATCACC+GGG | 0.594587 | 1_4:-60777824 | Msa0175000:intron |
| CTGATGTTGACATGAACAAG+AGG | 0.595729 | 1_4:-60779128 | Msa0175000:intron |
| GGCCGCAGGGGAAAGACTGT+TGG | 0.608087 | 1_4:-60777748 | Msa0175000:CDS |
| GTTGGATAATATTATGACAG+TGG | 0.620536 | 1_4:-60778930 | Msa0175000:CDS |
| TTCGCAATGACCTCAATCAA+GGG | 0.622158 | 1_4:-60779189 | Msa0175000:CDS |
| CCTCAATCAAGGGTATTGGT+AGG | 0.631523 | 1_4:-60779179 | Msa0175000:CDS |
| GAGGGACATACAGCCTTAAG+CGG | 0.645900 | 1_4:-60784181 | Msa0175000:five_prime_UTR |
| TTTAACCTAACTGCGGACGG+AGG | 0.653943 | 1_4:+60779371 | None:intergenic |
| ACCAAGACTACAGGCCGCAG+GGG | 0.654823 | 1_4:-60777760 | Msa0175000:CDS |
| TCTGGAACCTTGAATTGACG+AGG | 0.669518 | 1_4:+60778899 | None:intergenic |
| CGGGGTTTGAGGCACTACTG+GGG | 0.682879 | 1_4:-60777805 | Msa0175000:CDS |
| TCGCATTCTCAAGTGCCCAG+AGG | 0.702611 | 1_4:-60784200 | Msa0175000:five_prime_UTR |
| GTGCCTGATTAGTTGAATGG+TGG | 0.720987 | 1_4:-60777569 | Msa0175000:three_prime_UTR |
| CTGTTATGCAGTAATCACCG+GGG | 0.730953 | 1_4:-60777823 | Msa0175000:intron |
| TATGCTGACCACGAACACGA+AGG | 0.739225 | 1_4:+60777782 | None:intergenic |
| CACCAACAGTCTTTCCCCTG+CGG | 0.740988 | 1_4:+60777746 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTAAATTATTTGC+TGG | + | chr1_4:60778190-60778209 | None:intergenic | 10.0% |
| !! | TAAAAAAATATATACAAATG+GGG | - | chr1_4:60778204-60778223 | Msa0175000:intron | 10.0% |
| !!! | ATTGAGTTAATATTTTTAAA+AGG | - | chr1_4:60780278-60780297 | Msa0175000:intron | 10.0% |
| !!! | GATAATTAAGTTTTTTTTTT+TGG | + | chr1_4:60781305-60781324 | None:intergenic | 10.0% |
| !!! | TATTTTCCATTTAAATATTA+AGG | - | chr1_4:60782289-60782308 | Msa0175000:intron | 10.0% |
| !! | AATTCAATTCAATAATATAA+TGG | - | chr1_4:60783802-60783821 | Msa0175000:intron | 10.0% |
| !!! | TAGTAATATCATTTTCAAAT+TGG | + | chr1_4:60777656-60777675 | None:intergenic | 15.0% |
| !!! | GATATTATTACTTTTGATAA+AGG | - | chr1_4:60777752-60777771 | Msa0175000:CDS | 15.0% |
| !! | AATGCTAATTTAAAAAAACT+TGG | + | chr1_4:60779232-60779251 | None:intergenic | 15.0% |
| !!! | ATTTTGTATTTATTGATGAA+AGG | + | chr1_4:60779472-60779491 | None:intergenic | 15.0% |
| !! | TTTGTTTATTACAAACAAAA+TGG | + | chr1_4:60780136-60780155 | None:intergenic | 15.0% |
| !!! | ATTTTGTTTGTAATAAACAA+AGG | - | chr1_4:60780135-60780154 | Msa0175000:intron | 15.0% |
| !!! | CTATTTTTTATTTTGTAGAA+TGG | + | chr1_4:60780741-60780760 | None:intergenic | 15.0% |
| !! | TACAAAATAAAAAATAGAAG+AGG | - | chr1_4:60780744-60780763 | Msa0175000:intron | 15.0% |
| !!! | CTATTTTGTATGATTTTTAT+GGG | + | chr1_4:60780937-60780956 | None:intergenic | 15.0% |
| !!! | TCTATTTTGTATGATTTTTA+TGG | + | chr1_4:60780938-60780957 | None:intergenic | 15.0% |
| !!! | TTTTATGAATCAATTCTTAT+GGG | + | chr1_4:60781751-60781770 | None:intergenic | 15.0% |
| !!! | ATTTTATGAATCAATTCTTA+TGG | + | chr1_4:60781752-60781771 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTGTTCAAATTAA+TGG | - | chr1_4:60782636-60782655 | Msa0175000:intron | 15.0% |
| !!! | TTTTTGTTGTTCAAATTAAT+GGG | - | chr1_4:60782637-60782656 | Msa0175000:intron | 15.0% |
| !!! | TATTTTTGATGTTGTTTAAA+TGG | - | chr1_4:60782696-60782715 | Msa0175000:intron | 15.0% |
| !!! | GGTTTTTTTTTTTTTTTTGT+TGG | - | chr1_4:60782717-60782736 | Msa0175000:intron | 15.0% |
| !!! | TTTTTTTGTTGGATTTATTT+AGG | - | chr1_4:60782728-60782747 | Msa0175000:intron | 15.0% |
| !!! | TTTTTTGTTGGATTTATTTA+GGG | - | chr1_4:60782729-60782748 | Msa0175000:intron | 15.0% |
| !! | TTTGAGTAGTAAAAAAATAA+TGG | + | chr1_4:60783725-60783744 | None:intergenic | 15.0% |
| !! | ATTTGTTCAATTAATCATTC+AGG | + | chr1_4:60778125-60778144 | None:intergenic | 20.0% |
| !! | ATATGTTTCATATTCCTTTA+AGG | + | chr1_4:60778358-60778377 | None:intergenic | 20.0% |
| !! | ATGAAACATATGTGATAATT+TGG | - | chr1_4:60778367-60778386 | Msa0175000:intron | 20.0% |
| !! | ATCAATAAATACAAAATGAG+TGG | - | chr1_4:60779475-60779494 | Msa0175000:intron | 20.0% |
| !! | TCTCTTTATATTCTATCAAT+TGG | + | chr1_4:60779881-60779900 | None:intergenic | 20.0% |
| !!! | CAATTCATTTTGTTTTAGAT+TGG | + | chr1_4:60780005-60780024 | None:intergenic | 20.0% |
| !! | TTGTAGAATAAATTTGGAAA+GGG | + | chr1_4:60780066-60780085 | None:intergenic | 20.0% |
| !! | TTTGTAGAATAAATTTGGAA+AGG | + | chr1_4:60780067-60780086 | None:intergenic | 20.0% |
| !! | AAATATTAACTCAATGAGTT+AGG | + | chr1_4:60780273-60780292 | None:intergenic | 20.0% |
| !!! | GAGTTAATATTTTTAAAAGG+AGG | - | chr1_4:60780281-60780300 | Msa0175000:intron | 20.0% |
| !! | TGTAATTAACTCAATGAAAA+TGG | + | chr1_4:60780315-60780334 | None:intergenic | 20.0% |
| !!! | ATTTTCATTGAGTTAATTAC+AGG | - | chr1_4:60780314-60780333 | Msa0175000:intron | 20.0% |
| !! | TCAAGAATTAATCAAGAAAA+AGG | - | chr1_4:60780405-60780424 | Msa0175000:intron | 20.0% |
| !! | AAGAATAATAACTTTACCAT+CGG | - | chr1_4:60780606-60780625 | Msa0175000:intron | 20.0% |
| !! | AAATAAAAAATAGAAGAGGA+AGG | - | chr1_4:60780748-60780767 | Msa0175000:intron | 20.0% |
| !! | AATAAAAAATAGAAGAGGAA+GGG | - | chr1_4:60780749-60780768 | Msa0175000:intron | 20.0% |
| !! | ATAGAGAAATAAATCAGATT+AGG | + | chr1_4:60781338-60781357 | None:intergenic | 20.0% |
| !! | GATACATAGATGAATAAATT+CGG | + | chr1_4:60781478-60781497 | None:intergenic | 20.0% |
| !! | GGTAATCCTTAATATTTAAA+TGG | + | chr1_4:60782298-60782317 | None:intergenic | 20.0% |
| !! | AATACATAGTAAAAAATGCA+AGG | + | chr1_4:60783432-60783451 | None:intergenic | 20.0% |
| !! | TATGATATTCATGTTGATAT+AGG | - | chr1_4:60783468-60783487 | Msa0175000:intron | 20.0% |
| !! | ATGATATTCATGTTGATATA+GGG | - | chr1_4:60783469-60783488 | Msa0175000:intron | 20.0% |
| !!! | CAATAAAATTTTAGACTGTT+TGG | - | chr1_4:60783519-60783538 | Msa0175000:intron | 20.0% |
| !! | AATAAGATGAAAACAGTTTA+TGG | - | chr1_4:60783615-60783634 | Msa0175000:intron | 20.0% |
| !! | TAGTTTAAATAAATCCTATC+TGG | - | chr1_4:60783694-60783713 | Msa0175000:intron | 20.0% |
| !! | AGTTTAAATAAATCCTATCT+GGG | - | chr1_4:60783695-60783714 | Msa0175000:intron | 20.0% |
| !! | TTCTGTATTCAATAATACAA+TGG | - | chr1_4:60783745-60783764 | Msa0175000:intron | 20.0% |
| !!! | AATAATATAATGGATGTATG+TGG | - | chr1_4:60783812-60783831 | Msa0175000:intron | 20.0% |
| !! | AATTAAAAACCATACAAACT+CGG | + | chr1_4:60784072-60784091 | None:intergenic | 20.0% |
| !!! | CAGATTTTTTAACTTTCTAA+TGG | - | chr1_4:60784196-60784215 | Msa0175000:five_prime_UTR | 20.0% |
| !! | AGAATGCGAAAGAAATTTTA+GGG | + | chr1_4:60777493-60777512 | None:intergenic | 25.0% |
| !! | AATATCATTTTCAAATTGGC+TGG | + | chr1_4:60777652-60777671 | None:intergenic | 25.0% |
| ! | TTACTACTTCTGATAAAAAG+TGG | - | chr1_4:60777670-60777689 | Msa0175000:three_prime_UTR | 25.0% |
| ! | TGAGAAAATTACTTCAACAT+AGG | - | chr1_4:60779365-60779384 | Msa0175000:intron | 25.0% |
| ! | TTGAACCAAAATGAGATAAA+TGG | - | chr1_4:60779396-60779415 | Msa0175000:intron | 25.0% |
| ! | TATTGATGAAAGGTTTGTAA+TGG | + | chr1_4:60779462-60779481 | None:intergenic | 25.0% |
| !! | GCATTAATACCATTGATTAT+TGG | - | chr1_4:60779598-60779617 | Msa0175000:intron | 25.0% |
| !! | CAATTCTAACTAAGAAGTTT+TGG | + | chr1_4:60779674-60779693 | None:intergenic | 25.0% |
| ! | ATATCAGAGTATACTTAGTT+AGG | - | chr1_4:60779695-60779714 | Msa0175000:intron | 25.0% |
| ! | TTTGGAAAGGGATATATTTA+TGG | + | chr1_4:60780054-60780073 | None:intergenic | 25.0% |
| ! | TCCAAATTTATTCTACAAAG+TGG | - | chr1_4:60780068-60780087 | Msa0175000:intron | 25.0% |
| ! | TCCACTTTGTAGAATAAATT+TGG | + | chr1_4:60780072-60780091 | None:intergenic | 25.0% |
| ! | AAAATGGACAATAATCTTGA+TGG | + | chr1_4:60780120-60780139 | None:intergenic | 25.0% |
| !! | TAAGTTGTAATAAGCCTTTT+GGG | + | chr1_4:60780219-60780238 | None:intergenic | 25.0% |
| !! | ATAAGTTGTAATAAGCCTTT+TGG | + | chr1_4:60780220-60780239 | None:intergenic | 25.0% |
| ! | ATTAGTGAATCAATTTAGCA+GGG | - | chr1_4:60780497-60780516 | Msa0175000:intron | 25.0% |
| ! | CACTTAACAATTAACGATAT+CGG | - | chr1_4:60780525-60780544 | Msa0175000:intron | 25.0% |
| !!! | AAGTTGATTTGAGTTTTTTC+TGG | + | chr1_4:60780707-60780726 | None:intergenic | 25.0% |
| ! | AGATTGCATTAAGTTTATGT+AGG | + | chr1_4:60780815-60780834 | None:intergenic | 25.0% |
| ! | AATCGTTACATGCTATAATT+AGG | - | chr1_4:60780836-60780855 | Msa0175000:intron | 25.0% |
| ! | CAAGATCATTATAGACTTAT+AGG | + | chr1_4:60780995-60781014 | None:intergenic | 25.0% |
| ! | TAATAAATTGAGAAGGATCA+TGG | + | chr1_4:60781210-60781229 | None:intergenic | 25.0% |
| ! | GTTCTCTTAATAAATTGAGA+AGG | + | chr1_4:60781217-60781236 | None:intergenic | 25.0% |
| !! | GAGAAAATTGAAAATGGATT+GGG | - | chr1_4:60781869-60781888 | Msa0175000:intron | 25.0% |
| ! | AATTGAGCAATTAAAGCATA+AGG | + | chr1_4:60781976-60781995 | None:intergenic | 25.0% |
| ! | TTACCATAAATTTAAACCCT+AGG | - | chr1_4:60782190-60782209 | Msa0175000:intron | 25.0% |
| ! | TACCATAAATTTAAACCCTA+GGG | - | chr1_4:60782191-60782210 | Msa0175000:intron | 25.0% |
| !!! | AGACATTTTGAACTGATTTA+TGG | + | chr1_4:60782230-60782249 | None:intergenic | 25.0% |
| !! | TATGATTTTTAAACGTGAGA+TGG | + | chr1_4:60782678-60782697 | None:intergenic | 25.0% |
| ! | ATCATCTTTATAGTTAACAC+AGG | + | chr1_4:60782980-60782999 | None:intergenic | 25.0% |
| !!! | ACATTTTAACACTACTATGT+AGG | - | chr1_4:60783037-60783056 | Msa0175000:intron | 25.0% |
| ! | GAAAACAAAATACAAGTCAT+TGG | + | chr1_4:60783381-60783400 | None:intergenic | 25.0% |
| !!! | ACTTGTATTTTGTTTTCTCT+TGG | - | chr1_4:60783384-60783403 | Msa0175000:intron | 25.0% |
| ! | ACAGTTTAATTAAGCACTTA+TGG | - | chr1_4:60783546-60783565 | Msa0175000:intron | 25.0% |
| ! | AATAATACAATGGATGTATG+TGG | - | chr1_4:60783755-60783774 | Msa0175000:intron | 25.0% |
| !!! | TGGTTTTTAATTGAATGCAT+TGG | - | chr1_4:60784080-60784099 | Msa0175000:intron | 25.0% |
| !! | TTGGCAATTTCAATTTTGTT+TGG | - | chr1_4:60784099-60784118 | Msa0175000:intron | 25.0% |
| ! | AAAAAATCTGAAGAGCAAAT+TGG | + | chr1_4:60784186-60784205 | None:intergenic | 25.0% |
| !!! | ATTTTAGGGTTTGTGAGAAT+GGG | + | chr1_4:60777479-60777498 | None:intergenic | 30.0% |
| !!! | AATTTTAGGGTTTGTGAGAA+TGG | + | chr1_4:60777480-60777499 | None:intergenic | 30.0% |
| ! | GAGAATGCGAAAGAAATTTT+AGG | + | chr1_4:60777494-60777513 | None:intergenic | 30.0% |
| ! | ATTTTCATACACAACACGTT+TGG | - | chr1_4:60778006-60778025 | Msa0175000:intron | 30.0% |
| !! | AAAGGCATTATGAAAGAAGA+CGG | + | chr1_4:60778051-60778070 | None:intergenic | 30.0% |
| ! | TTTCATAATGCCTTTCTAGT+TGG | - | chr1_4:60778056-60778075 | Msa0175000:intron | 30.0% |
| AACAAATACTCCAACTAGAA+AGG | + | chr1_4:60778069-60778088 | None:intergenic | 30.0% | |
| TAATCATTCAGGAAACCTTA+AGG | + | chr1_4:60778114-60778133 | None:intergenic | 30.0% | |
| ATTCGATGGAACATATGTTT+CGG | + | chr1_4:60778460-60778479 | None:intergenic | 30.0% | |
| AATGTGATTGACAATTGTGT+TGG | + | chr1_4:60778587-60778606 | None:intergenic | 30.0% | |
| GTTAACAAAGCAAATTCTCA+CGG | + | chr1_4:60778978-60778997 | None:intergenic | 30.0% | |
| ! | AGACTTTTGTATCAGATACA+TGG | - | chr1_4:60779003-60779022 | Msa0175000:intron | 30.0% |
| ! | GACTTTTGTATCAGATACAT+GGG | - | chr1_4:60779004-60779023 | Msa0175000:intron | 30.0% |
| ! | ACTTTTGTATCAGATACATG+GGG | - | chr1_4:60779005-60779024 | Msa0175000:intron | 30.0% |
| TTCCAATTAACATCCAGAAT+TGG | - | chr1_4:60779031-60779050 | Msa0175000:intron | 30.0% | |
| ! | TGATTGTTTGTTAAGCACTT+TGG | + | chr1_4:60779093-60779112 | None:intergenic | 30.0% |
| !! | TTAAAACTTGAGAAGCATCT+AGG | - | chr1_4:60779326-60779345 | Msa0175000:intron | 30.0% |
| !! | TAAAACTTGAGAAGCATCTA+GGG | - | chr1_4:60779327-60779346 | Msa0175000:intron | 30.0% |
| GAAAATTACTTCAACATAGG+AGG | - | chr1_4:60779368-60779387 | Msa0175000:exon | 30.0% | |
| ! | GCTTTCCATTTATCTCATTT+TGG | + | chr1_4:60779404-60779423 | None:intergenic | 30.0% |
| !!! | CATGTATCCTGTTTTGATTA+TGG | + | chr1_4:60779574-60779593 | None:intergenic | 30.0% |
| ATCAAAACAGGATACATGAA+TGG | - | chr1_4:60779576-60779595 | Msa0175000:intron | 30.0% | |
| ACTACCATTTCATAGTGAAT+GGG | + | chr1_4:60779814-60779833 | None:intergenic | 30.0% | |
| ATGCTTTGTGAACAATTTCA+TGG | + | chr1_4:60779979-60779998 | None:intergenic | 30.0% | |
| TGATTTGAAAAGCAACGATT+GGG | + | chr1_4:60780190-60780209 | None:intergenic | 30.0% | |
| GAGTTAATTACAGGACTAAA+AGG | - | chr1_4:60780323-60780342 | Msa0175000:intron | 30.0% | |
| CATTAGTGAATCAATTTAGC+AGG | - | chr1_4:60780496-60780515 | Msa0175000:intron | 30.0% | |
| TTAGTGAATCAATTTAGCAG+GGG | - | chr1_4:60780498-60780517 | Msa0175000:intron | 30.0% | |
| TATCCAAGTCATTCTTCTAT+TGG | + | chr1_4:60780576-60780595 | None:intergenic | 30.0% | |
| AATAACTTCACCATCAACAT+TGG | - | chr1_4:60780666-60780685 | Msa0175000:intron | 30.0% | |
| !!! | TTTGAGTTTTTTCTGGTCTT+TGG | + | chr1_4:60780700-60780719 | None:intergenic | 30.0% |
| !!! | GAGTTTTTTCGTCGATAATT+AGG | - | chr1_4:60780858-60780877 | Msa0175000:intron | 30.0% |
| AATAGGTAGTTCATTGCATT+GGG | + | chr1_4:60781025-60781044 | None:intergenic | 30.0% | |
| GCTGATTATGTTTCATTGTT+TGG | + | chr1_4:60781110-60781129 | None:intergenic | 30.0% | |
| AACAATGAAACATAATCAGC+AGG | - | chr1_4:60781110-60781129 | Msa0175000:intron | 30.0% | |
| !!! | TTTTTTTTTGGGCATGTGTA+TGG | + | chr1_4:60781293-60781312 | None:intergenic | 30.0% |
| TATACTCAAAGTAAGTGTGT+AGG | - | chr1_4:60781374-60781393 | Msa0175000:intron | 30.0% | |
| !!! | TTTGCTTGCTGTTGAAATTT+TGG | + | chr1_4:60781436-60781455 | None:intergenic | 30.0% |
| TCATCTATGTATCTATAGCA+AGG | - | chr1_4:60781485-60781504 | Msa0175000:intron | 30.0% | |
| TTGTGAAAGAAGATTGTAGA+TGG | - | chr1_4:60781643-60781662 | Msa0175000:intron | 30.0% | |
| !!! | TGGTAAGTTTTAAGCATTTG+GGG | + | chr1_4:60781721-60781740 | None:intergenic | 30.0% |
| !!! | CTGGTAAGTTTTAAGCATTT+GGG | + | chr1_4:60781722-60781741 | None:intergenic | 30.0% |
| !!! | ACTGGTAAGTTTTAAGCATT+TGG | + | chr1_4:60781723-60781742 | None:intergenic | 30.0% |
| TATGAATCAATTCTTATGGG+TGG | + | chr1_4:60781748-60781767 | None:intergenic | 30.0% | |
| AATTGGAGATTTAAACCGTA+AGG | - | chr1_4:60781812-60781831 | Msa0175000:intron | 30.0% | |
| TGTGAGGAGAAAATTGAAAA+TGG | - | chr1_4:60781863-60781882 | Msa0175000:intron | 30.0% | |
| GGAGAAAATTGAAAATGGAT+TGG | - | chr1_4:60781868-60781887 | Msa0175000:intron | 30.0% | |
| !! | AAAATTGAAAATGGATTGGG+AGG | - | chr1_4:60781872-60781891 | Msa0175000:intron | 30.0% |
| TGTGTGTTTGTCTTATGATT+CGG | + | chr1_4:60782095-60782114 | None:intergenic | 30.0% | |
| ! | CAACATTTGAATCCAAGTTT+TGG | - | chr1_4:60782138-60782157 | Msa0175000:intron | 30.0% |
| !! | GTTTTAGCCCTTAGTTATTA+CGG | + | chr1_4:60782166-60782185 | None:intergenic | 30.0% |
| AACCCTAGGGTTTAAATTTA+TGG | + | chr1_4:60782196-60782215 | None:intergenic | 30.0% | |
| !! | ATACCATTTTAACCTAACTG+CGG | + | chr1_4:60782343-60782362 | None:intergenic | 30.0% |
| TTGTGATGTGTTATAGTCTT+TGG | - | chr1_4:60782421-60782440 | Msa0175000:intron | 30.0% | |
| GTTGGATAATATTATGACAG+TGG | - | chr1_4:60782774-60782793 | Msa0175000:intron | 30.0% | |
| TTTCTGTTCAAAAACCAATC+TGG | + | chr1_4:60782826-60782845 | None:intergenic | 30.0% | |
| !! | TTGGTTTTTGAACAGAAAGA+AGG | - | chr1_4:60782828-60782847 | Msa0175000:intron | 30.0% |
| !!! | CTCAGTTGGTTTTTTAGTAT+AGG | - | chr1_4:60783005-60783024 | Msa0175000:intron | 30.0% |
| AGATGTAGTAGTAAGATGAT+AGG | - | chr1_4:60783073-60783092 | Msa0175000:intron | 30.0% | |
| CTGTTATTCAAACACTATCA+AGG | + | chr1_4:60783144-60783163 | None:intergenic | 30.0% | |
| AGTGTTTGAAAATAGAACAG+TGG | - | chr1_4:60783264-60783283 | Msa0175000:intron | 30.0% | |
| GTGTTTGAAAATAGAACAGT+GGG | - | chr1_4:60783265-60783284 | Msa0175000:intron | 30.0% | |
| AATCAAATGTTTCCCATAAG+CGG | - | chr1_4:60783311-60783330 | Msa0175000:intron | 30.0% | |
| ATGAAAACAGTTTATGGACA+TGG | - | chr1_4:60783621-60783640 | Msa0175000:intron | 30.0% | |
| TTTGCATAAGCAAACTGTTT+GGG | + | chr1_4:60783669-60783688 | None:intergenic | 30.0% | |
| ATTTGCATAAGCAAACTGTT+TGG | + | chr1_4:60783670-60783689 | None:intergenic | 30.0% | |
| AATCATCTAATCTCCAAAAC+AGG | + | chr1_4:60784010-60784029 | None:intergenic | 30.0% | |
| ! | TTGGAGATTAGATGATTTTG+AGG | - | chr1_4:60784013-60784032 | Msa0175000:intron | 30.0% |
| TTTCATATACCGAGTTTGTA+TGG | - | chr1_4:60784060-60784079 | Msa0175000:intron | 30.0% | |
| CTTATGTGAAACGTGAATCT+TGG | + | chr1_4:60777846-60777865 | None:intergenic | 35.0% | |
| CGTTTCACATAAGCCATATA+TGG | - | chr1_4:60777853-60777872 | Msa0175000:intron | 35.0% | |
| CAACAATCAAGTCATCCTTA+AGG | - | chr1_4:60778096-60778115 | Msa0175000:intron | 35.0% | |
| TGGACTAAGGTTAACATTGA+TGG | + | chr1_4:60778281-60778300 | None:intergenic | 35.0% | |
| !!! | CTTAGTGTTTTTGGCCTTAA+AGG | - | chr1_4:60778341-60778360 | Msa0175000:intron | 35.0% |
| AGCTTCTAAATATGCTATGC+TGG | + | chr1_4:60778396-60778415 | None:intergenic | 35.0% | |
| ! | TATGTTTCGGAGTGTTATTG+TGG | + | chr1_4:60778447-60778466 | None:intergenic | 35.0% |
| CAATAATAATGCGCATTCGA+TGG | + | chr1_4:60778474-60778493 | None:intergenic | 35.0% | |
| !! | TTGACAATTGTGTTGGTAAC+TGG | + | chr1_4:60778580-60778599 | None:intergenic | 35.0% |
| GATGAGAATCTTAGGAAAAG+GGG | + | chr1_4:60778755-60778774 | None:intergenic | 35.0% | |
| GGATGAGAATCTTAGGAAAA+GGG | + | chr1_4:60778756-60778775 | None:intergenic | 35.0% | |
| CAGAAAATGAAAGACCTAGA+GGG | - | chr1_4:60778803-60778822 | Msa0175000:CDS | 35.0% | |
| AGTAAGTTCTCCATCATCAA+AGG | - | chr1_4:60778907-60778926 | Msa0175000:CDS | 35.0% | |
| TGCCAATTCTGGATGTTAAT+TGG | + | chr1_4:60779036-60779055 | None:intergenic | 35.0% | |
| ! | TAGAAGTCTTGGCTTTCATA+GGG | + | chr1_4:60779144-60779163 | None:intergenic | 35.0% |
| GTCATAAAAGAGGTTGTTGA+TGG | + | chr1_4:60779545-60779564 | None:intergenic | 35.0% | |
| ATGGAGAACTGTCATAAAAG+AGG | + | chr1_4:60779555-60779574 | None:intergenic | 35.0% | |
| CAGTTCTCCATAATCAAAAC+AGG | - | chr1_4:60779564-60779583 | Msa0175000:intron | 35.0% | |
| TCAGAGTATACTTAGTTAGG+TGG | - | chr1_4:60779698-60779717 | Msa0175000:intron | 35.0% | |
| CATTCCCATTCACTATGAAA+TGG | - | chr1_4:60779807-60779826 | Msa0175000:intron | 35.0% | |
| CACTACCATTTCATAGTGAA+TGG | + | chr1_4:60779815-60779834 | None:intergenic | 35.0% | |
| CATTCACTATGAAATGGTAG+TGG | - | chr1_4:60779813-60779832 | Msa0175000:intron | 35.0% | |
| GTGATTTGAAAAGCAACGAT+TGG | + | chr1_4:60780191-60780210 | None:intergenic | 35.0% | |
| TCAAATCACTCTTACCCAAA+AGG | - | chr1_4:60780202-60780221 | Msa0175000:intron | 35.0% | |
| CAACGCAACAAAAGATCTAA+AGG | - | chr1_4:60780244-60780263 | Msa0175000:intron | 35.0% | |
| !!! | GTGTGTTGCTTTTATCCTAA+AGG | + | chr1_4:60780439-60780458 | None:intergenic | 35.0% |
| CATCCAATAGAAGAATGACT+TGG | - | chr1_4:60780570-60780589 | Msa0175000:intron | 35.0% | |
| AAGTCATTCTTCAATACCGA+TGG | + | chr1_4:60780625-60780644 | None:intergenic | 35.0% | |
| ! | ATCGGTATTGAAGAATGACT+TGG | - | chr1_4:60780624-60780643 | Msa0175000:intron | 35.0% |
| !!! | GTTTTTTCTGGTCTTTGGAA+TGG | + | chr1_4:60780695-60780714 | None:intergenic | 35.0% |
| CAATAGGTAGTTCATTGCAT+TGG | + | chr1_4:60781026-60781045 | None:intergenic | 35.0% | |
| ATCTCATTGCTTGAAGCAAT+AGG | + | chr1_4:60781042-60781061 | None:intergenic | 35.0% | |
| AGCAATGAGATTTAACAGCA+AGG | - | chr1_4:60781051-60781070 | Msa0175000:intron | 35.0% | |
| !!! | TTTCTTCTGGTTTTTACCTC+TGG | + | chr1_4:60781149-60781168 | None:intergenic | 35.0% |
| !!! | TACTGCTGTCTTTTTTCTTC+TGG | + | chr1_4:60781162-60781181 | None:intergenic | 35.0% |
| ! | ATGGACTGCAGAAAAATTGT+GGG | + | chr1_4:60781274-60781293 | None:intergenic | 35.0% |
| ! | TATGGACTGCAGAAAAATTG+TGG | + | chr1_4:60781275-60781294 | None:intergenic | 35.0% |
| CAGCAAGCAAAATCAAATAG+AGG | - | chr1_4:60781445-60781464 | Msa0175000:intron | 35.0% | |
| CTTAACTACTTCCTTTGATG+CGG | - | chr1_4:60781539-60781558 | Msa0175000:intron | 35.0% | |
| TTAACTACTTCCTTTGATGC+GGG | - | chr1_4:60781540-60781559 | Msa0175000:intron | 35.0% | |
| TGTTACAGTGATAAGTTCGA+AGG | + | chr1_4:60781597-60781616 | None:intergenic | 35.0% | |
| GAACTTATCACTGTAACAGA+TGG | - | chr1_4:60781599-60781618 | Msa0175000:intron | 35.0% | |
| GTTTGATTGTGAGTCGAAAT+TGG | - | chr1_4:60781795-60781814 | Msa0175000:intron | 35.0% | |
| GAGCAATTAAAGCATAAGGT+CGG | + | chr1_4:60781972-60781991 | None:intergenic | 35.0% | |
| !! | TTATGATTCGGTGTGTGTTT+GGG | + | chr1_4:60782083-60782102 | None:intergenic | 35.0% |
| !! | TTTTGAACTGATTTATGGCC+TGG | + | chr1_4:60782225-60782244 | None:intergenic | 35.0% |
| CAAAATGTCTGAGTATGCTT+AGG | - | chr1_4:60782240-60782259 | Msa0175000:intron | 35.0% | |
| TGATGTGTTATAGTCTTTGG+TGG | - | chr1_4:60782424-60782443 | Msa0175000:intron | 35.0% | |
| GTGTTGAACACAAATGTTGA+TGG | - | chr1_4:60782476-60782495 | Msa0175000:intron | 35.0% | |
| ! | TTGTTGGATTTATTTAGGGC+TGG | - | chr1_4:60782733-60782752 | Msa0175000:intron | 35.0% |
| GAACAGAAAGAAGGATTACA+AGG | - | chr1_4:60782837-60782856 | Msa0175000:intron | 35.0% | |
| AGAAAGAAGGATTACAAGGA+TGG | - | chr1_4:60782841-60782860 | Msa0175000:intron | 35.0% | |
| CATGAAGTTGAGAGATGATT+TGG | - | chr1_4:60782897-60782916 | Msa0175000:intron | 35.0% | |
| ACAATGAAGTAGCATCTTAC+CGG | + | chr1_4:60782939-60782958 | None:intergenic | 35.0% | |
| AAAGATGATTCTCACTCAGT+TGG | - | chr1_4:60782991-60783010 | Msa0175000:intron | 35.0% | |
| ACTAATAACCATTGCTTCGA+TGG | - | chr1_4:60783096-60783115 | Msa0175000:intron | 35.0% | |
| ACAGAACGAGAATTCACTAT+TGG | - | chr1_4:60783160-60783179 | Msa0175000:intron | 35.0% | |
| TTGCATAAGCAAACTGTTTG+GGG | + | chr1_4:60783668-60783687 | None:intergenic | 35.0% | |
| ATGGATGTATGTGGAGAAAT+TGG | - | chr1_4:60783821-60783840 | Msa0175000:intron | 35.0% | |
| TGGATGTATGTGGAGAAATT+GGG | - | chr1_4:60783822-60783841 | Msa0175000:intron | 35.0% | |
| GTGATTACTGCATAACAGAA+AGG | + | chr1_4:60783879-60783898 | None:intergenic | 35.0% | |
| TTCTGTTATGCAGTAATCAC+CGG | - | chr1_4:60783879-60783898 | Msa0175000:intron | 35.0% | |
| ATACCACCATTCAACTAATC+AGG | + | chr1_4:60784141-60784160 | None:intergenic | 35.0% | |
| AAACGTGAATGCGCCATATA+TGG | + | chr1_4:60777869-60777888 | None:intergenic | 40.0% | |
| !!! | CAACACGTTTGGCTTTTTTG+TGG | - | chr1_4:60778017-60778036 | Msa0175000:intron | 40.0% |
| ! | AACATTGATGGATCCTGCTT+TGG | + | chr1_4:60778269-60778288 | None:intergenic | 40.0% |
| ACCTTAGTCCAACCAATATC+TGG | - | chr1_4:60778290-60778309 | Msa0175000:intron | 40.0% | |
| ! | TCCAGATATTGGTTGGACTA+AGG | + | chr1_4:60778294-60778313 | None:intergenic | 40.0% |
| ! | TCAACGGCACTTAGTGTTTT+TGG | - | chr1_4:60778332-60778351 | Msa0175000:intron | 40.0% |
| ! | AAATGCAGAAGCTTTGGCAT+AGG | + | chr1_4:60778655-60778674 | None:intergenic | 40.0% |
| CGGATGAGAATCTTAGGAAA+AGG | + | chr1_4:60778757-60778776 | None:intergenic | 40.0% | |
| TTCCTAAGATTCTCATCCGT+CGG | - | chr1_4:60778758-60778777 | Msa0175000:intron | 40.0% | |
| ! | CCTCTAGGTCTTTCATTTTC+TGG | + | chr1_4:60778805-60778824 | None:intergenic | 40.0% |
| CCAGAAAATGAAAGACCTAG+AGG | - | chr1_4:60778802-60778821 | Msa0175000:CDS | 40.0% | |
| AAAATGAAAGACCTAGAGGG+AGG | - | chr1_4:60778806-60778825 | Msa0175000:CDS | 40.0% | |
| TGAGGTGGTGTAAGTTAGTT+TGG | + | chr1_4:60778844-60778863 | None:intergenic | 40.0% | |
| TATAACACCTTGCACATCTC+TGG | + | chr1_4:60778875-60778894 | None:intergenic | 40.0% | |
| ! | AGAGATGTGCAAGGTGTTAT+AGG | - | chr1_4:60778874-60778893 | Msa0175000:CDS | 40.0% |
| TTTGTTCAGCTTGCCAATTC+TGG | + | chr1_4:60779047-60779066 | None:intergenic | 40.0% | |
| ! | GTAGAAGTCTTGGCTTTCAT+AGG | + | chr1_4:60779145-60779164 | None:intergenic | 40.0% |
| TGCATTCGTTGTAGAAGTCT+TGG | + | chr1_4:60779155-60779174 | None:intergenic | 40.0% | |
| AACCTTCCATTGAAGTTTGC+AGG | - | chr1_4:60779435-60779454 | Msa0175000:intron | 40.0% | |
| ACCTTCCATTGAAGTTTGCA+GGG | - | chr1_4:60779436-60779455 | Msa0175000:intron | 40.0% | |
| CGATGCATGCCAATAATCAA+TGG | + | chr1_4:60779610-60779629 | None:intergenic | 40.0% | |
| TAGCAGCAGAGGAAAAGAAA+AGG | - | chr1_4:60780346-60780365 | Msa0175000:intron | 40.0% | |
| AGCAGCAGAGGAAAAGAAAA+GGG | - | chr1_4:60780347-60780366 | Msa0175000:intron | 40.0% | |
| ! | CTTTTATCCTAAAGGCAGCA+AGG | + | chr1_4:60780431-60780450 | None:intergenic | 40.0% |
| GAGAAGTTTGCAACGATTAC+TGG | + | chr1_4:60780477-60780496 | None:intergenic | 40.0% | |
| GGAATGGATACCAATGTTGA+TGG | + | chr1_4:60780679-60780698 | None:intergenic | 40.0% | |
| TAGCATCACACATCTAACAG+TGG | - | chr1_4:60780893-60780912 | Msa0175000:intron | 40.0% | |
| AGTGGTCAAGGAACATCTTA+TGG | - | chr1_4:60780911-60780930 | Msa0175000:intron | 40.0% | |
| TGAGAAGGATCATGGAAACT+AGG | + | chr1_4:60781202-60781221 | None:intergenic | 40.0% | |
| ACAAGTGTATTTACTGCTGC+TGG | + | chr1_4:60781241-60781260 | None:intergenic | 40.0% | |
| CGCATCAAAGGAAGTAGTTA+AGG | + | chr1_4:60781541-60781560 | None:intergenic | 40.0% | |
| GTGATAAGTTCGAAGGAGAA+TGG | + | chr1_4:60781590-60781609 | None:intergenic | 40.0% | |
| TTCTCTCTAATTCGCTTGCT+GGG | + | chr1_4:60781692-60781711 | None:intergenic | 40.0% | |
| TTTCTCTCTAATTCGCTTGC+TGG | + | chr1_4:60781693-60781712 | None:intergenic | 40.0% | |
| GCAAGCGAATTAGAGAGAAA+TGG | - | chr1_4:60781693-60781712 | Msa0175000:intron | 40.0% | |
| CAATTCTTATGGGTGGTAAC+TGG | + | chr1_4:60781741-60781760 | None:intergenic | 40.0% | |
| TTTAAACCGTAAGGAGAGAG+AGG | - | chr1_4:60781821-60781840 | Msa0175000:intron | 40.0% | |
| AGGAAGAATAAGCTTCCGTA+TGG | - | chr1_4:60781897-60781916 | Msa0175000:intron | 40.0% | |
| GGAAGAATAAGCTTCCGTAT+GGG | - | chr1_4:60781898-60781917 | Msa0175000:intron | 40.0% | |
| ! | CATCCTATTGGCTAATTGTG+TGG | - | chr1_4:60782019-60782038 | Msa0175000:intron | 40.0% |
| TAGCCACACAATTAGCCAAT+AGG | + | chr1_4:60782025-60782044 | None:intergenic | 40.0% | |
| !! | CTTATGATTCGGTGTGTGTT+TGG | + | chr1_4:60782084-60782103 | None:intergenic | 40.0% |
| ! | TTTTGGCGCCGTAATAACTA+AGG | - | chr1_4:60782155-60782174 | Msa0175000:intron | 40.0% |
| TTTGGCGCCGTAATAACTAA+GGG | - | chr1_4:60782156-60782175 | Msa0175000:intron | 40.0% | |
| GTCTGAGTATGCTTAGGTTA+TGG | - | chr1_4:60782246-60782265 | Msa0175000:intron | 40.0% | |
| AGTATGCTTAGGTTATGGCT+AGG | - | chr1_4:60782251-60782270 | Msa0175000:intron | 40.0% | |
| GTATGCTTAGGTTATGGCTA+GGG | - | chr1_4:60782252-60782271 | Msa0175000:intron | 40.0% | |
| ! | ACGGAGGATTTTGTTGAAGA+GGG | + | chr1_4:60782320-60782339 | None:intergenic | 40.0% |
| !! | CATTTTAACCTAACTGCGGA+CGG | + | chr1_4:60782339-60782358 | None:intergenic | 40.0% |
| TTCGCAATGACCTCAATCAA+GGG | - | chr1_4:60782515-60782534 | Msa0175000:intron | 40.0% | |
| ! | ATGACCTCAATCAAGGGTAT+TGG | - | chr1_4:60782521-60782540 | Msa0175000:intron | 40.0% |
| CTGATGTTGACATGAACAAG+AGG | - | chr1_4:60782576-60782595 | Msa0175000:intron | 40.0% | |
| GTCAATTCAAGGTTCCAGAT+TGG | - | chr1_4:60782809-60782828 | Msa0175000:intron | 40.0% | |
| !! | CAACTTCATGTCGAGTTGAT+TGG | + | chr1_4:60782887-60782906 | None:intergenic | 40.0% |
| ATAACCATTGCTTCGATGGT+TGG | - | chr1_4:60783100-60783119 | Msa0175000:intron | 40.0% | |
| GTTTCCCATAAGCGGAAATA+CGG | - | chr1_4:60783319-60783338 | Msa0175000:intron | 40.0% | |
| TTTCCCATAAGCGGAAATAC+GGG | - | chr1_4:60783320-60783339 | Msa0175000:intron | 40.0% | |
| GGAAATACGGGCAATAGAAT+TGG | - | chr1_4:60783332-60783351 | Msa0175000:intron | 40.0% | |
| GAATTGGACCAAAAAGTAGC+TGG | - | chr1_4:60783348-60783367 | Msa0175000:intron | 40.0% | |
| !!! | GATAAGAGCCAGCTACTTTT+TGG | + | chr1_4:60783359-60783378 | None:intergenic | 40.0% |
| AAATAATGGCATGCCCAGAT+AGG | + | chr1_4:60783711-60783730 | None:intergenic | 40.0% | |
| TATGTGGAGAAATTGGGCAT+TGG | - | chr1_4:60783828-60783847 | Msa0175000:intron | 40.0% | |
| TCTGTTATGCAGTAATCACC+GGG | - | chr1_4:60783880-60783899 | Msa0175000:intron | 40.0% | |
| ! | TTAAGCGTGATGTCCTGTTT+TGG | - | chr1_4:60783994-60784013 | Msa0175000:intron | 40.0% |
| ! | CAAGTGCCTGATTAGTTGAA+TGG | - | chr1_4:60784132-60784151 | Msa0175000:intron | 40.0% |
| GAGCAAATTGGTCATGCTAA+AGG | + | chr1_4:60784174-60784193 | None:intergenic | 40.0% | |
| TTAAGGCTGTATGTCCCTCT+GGG | + | chr1_4:60777522-60777541 | None:intergenic | 45.0% | |
| TGGCTGGATTTCAAAGCTAC+TGG | + | chr1_4:60777826-60777845 | None:intergenic | 45.0% | |
| TGTGAAACGTGAATCTTGGC+TGG | + | chr1_4:60777842-60777861 | None:intergenic | 45.0% | |
| !!! | CACGTTTGGCTTTTTTGTGG+TGG | - | chr1_4:60778020-60778039 | Msa0175000:intron | 45.0% |
| TACTGGCACTCTCCAGATAT+TGG | + | chr1_4:60778305-60778324 | None:intergenic | 45.0% | |
| GTGCCAGTAGACATTCTCAA+CGG | - | chr1_4:60778316-60778335 | Msa0175000:intron | 45.0% | |
| ! | CGGAGTGTTATTGTGGAAGT+AGG | + | chr1_4:60778440-60778459 | None:intergenic | 45.0% |
| CAGTTCTGCACATTATCTGG+AGG | + | chr1_4:60778526-60778545 | None:intergenic | 45.0% | |
| CAGCAGTTCTGCACATTATC+TGG | + | chr1_4:60778529-60778548 | None:intergenic | 45.0% | |
| !! | TGTTGGTAACTGGAGCAAAC+AGG | + | chr1_4:60778570-60778589 | None:intergenic | 45.0% |
| TTTGGCATAGGTTGTGCACT+GGG | + | chr1_4:60778643-60778662 | None:intergenic | 45.0% | |
| TGCCAAAGCTTCTGCATTTC+TGG | - | chr1_4:60778656-60778675 | Msa0175000:intron | 45.0% | |
| GCCAAAGCTTCTGCATTTCT+GGG | - | chr1_4:60778657-60778676 | Msa0175000:intron | 45.0% | |
| GCAGCAGAAGAAAAGATGAG+TGG | - | chr1_4:60778679-60778698 | Msa0175000:intron | 45.0% | |
| ACAATTTCGTACCTCCCTCT+AGG | + | chr1_4:60778820-60778839 | None:intergenic | 45.0% | |
| AACTTACACCACCTCACCTT+AGG | - | chr1_4:60778848-60778867 | Msa0175000:CDS | 45.0% | |
| AATTGGAGGGCCTTTGATGA+TGG | + | chr1_4:60778920-60778939 | None:intergenic | 45.0% | |
| ! | ATTCCCGCGATAGGTTGAAT+TGG | + | chr1_4:60778937-60778956 | None:intergenic | 45.0% |
| TTATCGATGATTCCCGCGAT+AGG | + | chr1_4:60778946-60778965 | None:intergenic | 45.0% | |
| GCGGGAATCATCGATAAAGA+GGG | - | chr1_4:60778949-60778968 | Msa0175000:CDS | 45.0% | |
| GACTTCTACAACGAATGCAG+TGG | - | chr1_4:60779156-60779175 | Msa0175000:CDS | 45.0% | |
| AATGGCCCTGCAAACTTCAA+TGG | + | chr1_4:60779444-60779463 | None:intergenic | 45.0% | |
| GCGCATGCTGAAAAAGCTAA+TGG | - | chr1_4:60779510-60779529 | Msa0175000:intron | 45.0% | |
| TTAGGTGGCAATGAAGCACA+TGG | - | chr1_4:60779713-60779732 | Msa0175000:intron | 45.0% | |
| AAAGAAAAGGGTTGCAGCAG+AGG | - | chr1_4:60780359-60780378 | Msa0175000:intron | 45.0% | |
| AAGAAAAGGGTTGCAGCAGA+GGG | - | chr1_4:60780360-60780379 | Msa0175000:intron | 45.0% | |
| AAAAAGGCCTTGCTGCCTTT+AGG | - | chr1_4:60780421-60780440 | Msa0175000:intron | 45.0% | |
| CACACATCTAACAGTGGTCA+AGG | - | chr1_4:60780899-60780918 | Msa0175000:intron | 45.0% | |
| ! | AGAGCTCTGATTAGTCGAGT+GGG | + | chr1_4:60781080-60781099 | None:intergenic | 45.0% |
| ! | TAGAGCTCTGATTAGTCGAG+TGG | + | chr1_4:60781081-60781100 | None:intergenic | 45.0% |
| AGGAAAACTTTGCACACCAG+AGG | - | chr1_4:60781130-60781149 | Msa0175000:intron | 45.0% | |
| AGAAGAGAATCCCGCATCAA+AGG | + | chr1_4:60781553-60781572 | None:intergenic | 45.0% | |
| ! | GGAGAGAGTTTAGGTTTGTG+AGG | - | chr1_4:60781847-60781866 | Msa0175000:intron | 45.0% |
| !! | TGAAAATGGATTGGGAGGAG+AGG | - | chr1_4:60781877-60781896 | Msa0175000:intron | 45.0% |
| ! | ATAAGGTCGGTTTCAGAGGT+CGG | + | chr1_4:60781959-60781978 | None:intergenic | 45.0% |
| ! | AAGCATAAGGTCGGTTTCAG+AGG | + | chr1_4:60781963-60781982 | None:intergenic | 45.0% |
| ! | CACGTGAAGCATCATCCTAT+TGG | - | chr1_4:60782007-60782026 | Msa0175000:intron | 45.0% |
| GTTATTACGGCGCCAAAACT+TGG | + | chr1_4:60782153-60782172 | None:intergenic | 45.0% | |
| ! | TGAACTGATTTATGGCCTGG+CGG | + | chr1_4:60782222-60782241 | None:intergenic | 45.0% |
| ! | CGGAGGATTTTGTTGAAGAG+GGG | + | chr1_4:60782319-60782338 | None:intergenic | 45.0% |
| ! | GACGGAGGATTTTGTTGAAG+AGG | + | chr1_4:60782321-60782340 | None:intergenic | 45.0% |
| CGTCCGCAGTTAGGTTAAAA+TGG | - | chr1_4:60782337-60782356 | Msa0175000:intron | 45.0% | |
| TGATTGAGGTCATTGCGAAC+TGG | + | chr1_4:60782514-60782533 | None:intergenic | 45.0% | |
| GTTCGCAATGACCTCAATCA+AGG | - | chr1_4:60782514-60782533 | Msa0175000:intron | 45.0% | |
| CCTACCAATACCCTTGATTG+AGG | + | chr1_4:60782528-60782547 | None:intergenic | 45.0% | |
| !! | CCTCAATCAAGGGTATTGGT+AGG | - | chr1_4:60782525-60782544 | Msa0175000:intron | 45.0% |
| ! | TGAATTGAGTGCTGCAGAGT+TGG | - | chr1_4:60782756-60782775 | Msa0175000:intron | 45.0% |
| TGCGAATCCTCGTCAATTCA+AGG | - | chr1_4:60782798-60782817 | Msa0175000:intron | 45.0% | |
| ! | TCTGGAACCTTGAATTGACG+AGG | + | chr1_4:60782808-60782827 | None:intergenic | 45.0% |
| CAAGGATGGCAAATTCTCTC+AGG | - | chr1_4:60782855-60782874 | Msa0175000:intron | 45.0% | |
| TGGAGAGACTCAAGAAGATC+CGG | - | chr1_4:60782917-60782936 | Msa0175000:intron | 45.0% | |
| ACACGATCAAAGCAATGCAG+TGG | + | chr1_4:60783222-60783241 | None:intergenic | 45.0% | |
| TTGCCCGTATTTCCGCTTAT+GGG | + | chr1_4:60783326-60783345 | None:intergenic | 45.0% | |
| ATTGCCCGTATTTCCGCTTA+TGG | + | chr1_4:60783327-60783346 | None:intergenic | 45.0% | |
| CTGTTATGCAGTAATCACCG+GGG | - | chr1_4:60783881-60783900 | Msa0175000:intron | 45.0% | |
| ! | GTGCCTGATTAGTTGAATGG+TGG | - | chr1_4:60784135-60784154 | Msa0175000:intron | 45.0% |
| !! | AATAAAAAAATATATACAAA+TGG | - | chr1_4:60778202-60778221 | Msa0175000:intron | 5.0% |
| !! | ATAAAAAAATATATACAAAT+GGG | - | chr1_4:60778203-60778222 | Msa0175000:intron | 5.0% |
| !!! | ATAATTAAGTTTTTTTTTTT+GGG | + | chr1_4:60781304-60781323 | None:intergenic | 5.0% |
| CTTAAGGCTGTATGTCCCTC+TGG | + | chr1_4:60777523-60777542 | None:intergenic | 50.0% | |
| GAGGGACATACAGCCTTAAG+CGG | - | chr1_4:60777523-60777542 | Msa0175000:intron | 50.0% | |
| GCATCTGGACTAAGGTCAGT+TGG | + | chr1_4:60778239-60778258 | None:intergenic | 50.0% | |
| ACTGACCTTAGTCCAGATGC+AGG | - | chr1_4:60778239-60778258 | Msa0175000:intron | 50.0% | |
| CTGACCTTAGTCCAGATGCA+GGG | - | chr1_4:60778240-60778259 | Msa0175000:intron | 50.0% | |
| TGACCTTAGTCCAGATGCAG+GGG | - | chr1_4:60778241-60778260 | Msa0175000:intron | 50.0% | |
| GGCACTCTCCAGATATTGGT+TGG | + | chr1_4:60778301-60778320 | None:intergenic | 50.0% | |
| ! | GTGCCGTTGAGAATGTCTAC+TGG | + | chr1_4:60778322-60778341 | None:intergenic | 50.0% |
| CTTTGGCATAGGTTGTGCAC+TGG | + | chr1_4:60778644-60778663 | None:intergenic | 50.0% | |
| GCCCAGAAATGCAGAAGCTT+TGG | + | chr1_4:60778661-60778680 | None:intergenic | 50.0% | |
| TGCCGACGGATGAGAATCTT+AGG | + | chr1_4:60778763-60778782 | None:intergenic | 50.0% | |
| AGCTCACAACAAGTTGCCGA+CGG | + | chr1_4:60778777-60778796 | None:intergenic | 50.0% | |
| ACATCTCTGGTCCTAAGGTG+AGG | + | chr1_4:60778862-60778881 | None:intergenic | 50.0% | |
| CTTGCACATCTCTGGTCCTA+AGG | + | chr1_4:60778867-60778886 | None:intergenic | 50.0% | |
| CTTAGGACCAGAGATGTGCA+AGG | - | chr1_4:60778865-60778884 | Msa0175000:CDS | 50.0% | |
| ! | CCGCGATAGGTTGAATTGGA+GGG | + | chr1_4:60778933-60778952 | None:intergenic | 50.0% |
| CCCTCCAATTCAACCTATCG+CGG | - | chr1_4:60778930-60778949 | Msa0175000:CDS | 50.0% | |
| CCTCCAATTCAACCTATCGC+GGG | - | chr1_4:60778931-60778950 | Msa0175000:CDS | 50.0% | |
| CGCGGGAATCATCGATAAAG+AGG | - | chr1_4:60778948-60778967 | Msa0175000:CDS | 50.0% | |
| GCCCTGCAAACTTCAATGGA+AGG | + | chr1_4:60779440-60779459 | None:intergenic | 50.0% | |
| GGACTAAAAGGTAGCAGCAG+AGG | - | chr1_4:60780335-60780354 | Msa0175000:intron | 50.0% | |
| ! | AGCTCTGATTAGTCGAGTGG+GGG | + | chr1_4:60781078-60781097 | None:intergenic | 50.0% |
| ! | GAGCTCTGATTAGTCGAGTG+GGG | + | chr1_4:60781079-60781098 | None:intergenic | 50.0% |
| AAACCGTAAGGAGAGAGAGG+TGG | - | chr1_4:60781824-60781843 | Msa0175000:intron | 50.0% | |
| AACCGTAAGGAGAGAGAGGT+GGG | - | chr1_4:60781825-60781844 | Msa0175000:intron | 50.0% | |
| TCTTCCCTCTCTCTCCCATA+CGG | + | chr1_4:60781915-60781934 | None:intergenic | 50.0% | |
| GTTTGGGCGGCAATGTGAAT+TGG | + | chr1_4:60782067-60782086 | None:intergenic | 50.0% | |
| !! | TGATTCGGTGTGTGTTTGGG+CGG | + | chr1_4:60782080-60782099 | None:intergenic | 50.0% |
| AAAATCCTCCGTCCGCAGTT+AGG | - | chr1_4:60782328-60782347 | Msa0175000:intron | 50.0% | |
| TTTAACCTAACTGCGGACGG+AGG | + | chr1_4:60782336-60782355 | None:intergenic | 50.0% | |
| AGCACCAACCATCGAAGCAA+TGG | + | chr1_4:60783107-60783126 | None:intergenic | 50.0% | |
| CGATCAAAGCAATGCAGTGG+TGG | + | chr1_4:60783219-60783238 | None:intergenic | 50.0% | |
| !! | TGGAGAAATTGGGCATTGGC+TGG | - | chr1_4:60783832-60783851 | Msa0175000:intron | 50.0% |
| TATGCTGACCACGAACACGA+AGG | + | chr1_4:60783925-60783944 | None:intergenic | 50.0% | |
| GGTCAGCATACCAAGACTAC+AGG | - | chr1_4:60783935-60783954 | Msa0175000:intron | 50.0% | |
| TCGCATTCTCAAGTGCCCAG+AGG | - | chr1_4:60777504-60777523 | Msa0175000:three_prime_UTR | 55.0% | |
| CGCATTCTCAAGTGCCCAGA+GGG | - | chr1_4:60777505-60777524 | Msa0175000:three_prime_UTR | 55.0% | |
| CTGGAGCAAACAGGTTCAGC+AGG | + | chr1_4:60778561-60778580 | None:intergenic | 55.0% | |
| AAGACCTGGACTGCTCAGGA+TGG | + | chr1_4:60778613-60778632 | None:intergenic | 55.0% | |
| ATCCTGAGCAGTCCAGGTCT+TGG | - | chr1_4:60778612-60778631 | Msa0175000:intron | 55.0% | |
| CACTGGGATTGACCAAGACC+TGG | + | chr1_4:60778627-60778646 | None:intergenic | 55.0% | |
| TCTCTGGTCCTAAGGTGAGG+TGG | + | chr1_4:60778859-60778878 | None:intergenic | 55.0% | |
| ! | CCCGCGATAGGTTGAATTGG+AGG | + | chr1_4:60778934-60778953 | None:intergenic | 55.0% |
| ! | GCTCTGATTAGTCGAGTGGG+GGG | + | chr1_4:60781077-60781096 | None:intergenic | 55.0% |
| ACCGTAAGGAGAGAGAGGTG+GGG | - | chr1_4:60781826-60781845 | Msa0175000:intron | 55.0% | |
| TCCCCACCTCTCTCTCCTTA+CGG | + | chr1_4:60781830-60781849 | None:intergenic | 55.0% | |
| GAGAGGTGGGGAGAGAGTTT+AGG | - | chr1_4:60781838-60781857 | Msa0175000:intron | 55.0% | |
| AGCTTCCGTATGGGAGAGAG+AGG | - | chr1_4:60781907-60781926 | Msa0175000:intron | 55.0% | |
| GCTTCCGTATGGGAGAGAGA+GGG | - | chr1_4:60781908-60781927 | Msa0175000:intron | 55.0% | |
| ! | AACCCTAGGGTTTTACCGCC+AGG | - | chr1_4:60782204-60782223 | Msa0175000:intron | 55.0% |
| ! | ATGCAGTGGTGGTGCATCAG+CGG | + | chr1_4:60783208-60783227 | None:intergenic | 55.0% |
| GCAGTAATCACCGGGGTTTG+AGG | - | chr1_4:60783888-60783907 | Msa0175000:intron | 55.0% | |
| ATACCAAGACTACAGGCCGC+AGG | - | chr1_4:60783942-60783961 | Msa0175000:intron | 55.0% | |
| TACCAAGACTACAGGCCGCA+GGG | - | chr1_4:60783943-60783962 | Msa0175000:intron | 55.0% | |
| CACCAACAGTCTTTCCCCTG+CGG | + | chr1_4:60783961-60783980 | None:intergenic | 55.0% | |
| ! | CGGCGACTAGTTGCCGCTTA+AGG | + | chr1_4:60777539-60777558 | None:intergenic | 60.0% |
| GAGCCCCTGCATCTGGACTA+AGG | + | chr1_4:60778247-60778266 | None:intergenic | 60.0% | |
| !! | TGCTTTGGAGCCCCTGCATC+TGG | + | chr1_4:60778254-60778273 | None:intergenic | 60.0% |
| AGATGCAGGGGCTCCAAAGC+AGG | - | chr1_4:60778253-60778272 | Msa0175000:intron | 60.0% | |
| TCAGCCATCCTGAGCAGTCC+AGG | - | chr1_4:60778606-60778625 | Msa0175000:intron | 60.0% | |
| GACCAAGACCTGGACTGCTC+AGG | + | chr1_4:60778617-60778636 | None:intergenic | 60.0% | |
| GGCCTGGCGGTAAAACCCTA+GGG | + | chr1_4:60782209-60782228 | None:intergenic | 60.0% | |
| TGGCCTGGCGGTAAAACCCT+AGG | + | chr1_4:60782210-60782229 | None:intergenic | 60.0% | |
| ! | ACCGGGGTTTGAGGCACTAC+TGG | - | chr1_4:60783897-60783916 | Msa0175000:intron | 60.0% |
| CCCAGTAGTGCCTCAAACCC+CGG | + | chr1_4:60783901-60783920 | None:intergenic | 60.0% | |
| ! | CCGGGGTTTGAGGCACTACT+GGG | - | chr1_4:60783898-60783917 | Msa0175000:intron | 60.0% |
| ! | CGGGGTTTGAGGCACTACTG+GGG | - | chr1_4:60783899-60783918 | Msa0175000:intron | 60.0% |
| TACTGGGGCCTTCGTGTTCG+TGG | - | chr1_4:60783914-60783933 | Msa0175000:intron | 60.0% | |
| ACCAAGACTACAGGCCGCAG+GGG | - | chr1_4:60783944-60783963 | Msa0175000:intron | 60.0% | |
| ATTAACCCGCGCGACAGCGC+GGG | + | chr1_4:60777563-60777582 | None:intergenic | 65.0% | |
| CATTAACCCGCGCGACAGCG+CGG | + | chr1_4:60777564-60777583 | None:intergenic | 65.0% | |
| TCCCCTGCGGCCTGTAGTCT+TGG | + | chr1_4:60783948-60783967 | None:intergenic | 65.0% | |
| GGCCGCAGGGGAAAGACTGT+TGG | - | chr1_4:60783956-60783975 | Msa0175000:intron | 65.0% | |
| ! | ACCCGCGCGACAGCGCGGGT+CGG | + | chr1_4:60777559-60777578 | None:intergenic | 80.0% |
| ! | CGCCGACCCGCGCTGTCGCG+CGG | - | chr1_4:60777554-60777573 | Msa0175000:intron | 85.0% |
| ! | GCCGACCCGCGCTGTCGCGC+GGG | - | chr1_4:60777555-60777574 | Msa0175000:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 60777475 | 60784251 | 60777475 | ID=Msa0175000;Name=Msa0175000 |
| chr1_4 | mRNA | 60777475 | 60784251 | 60777475 | ID=Msa0175000-mRNA-1;Parent=Msa0175000;Name=Msa0175000-mRNA-1;_AED=0.07;_eAED=0.07;_QI=117|1|1|1|0.6|0.33|6|222|152 |
| chr1_4 | exon | 60777475 | 60777527 | 60777475 | ID=Msa0175000-mRNA-1:exon:19280;Parent=Msa0175000-mRNA-1 |
| chr1_4 | exon | 60777560 | 60777834 | 60777560 | ID=Msa0175000-mRNA-1:exon:19279;Parent=Msa0175000-mRNA-1 |
| chr1_4 | exon | 60778788 | 60778976 | 60778788 | ID=Msa0175000-mRNA-1:exon:19278;Parent=Msa0175000-mRNA-1 |
| chr1_4 | exon | 60779129 | 60779289 | 60779129 | ID=Msa0175000-mRNA-1:exon:19277;Parent=Msa0175000-mRNA-1 |
| chr1_4 | exon | 60779368 | 60779414 | 60779368 | ID=Msa0175000-mRNA-1:exon:19276;Parent=Msa0175000-mRNA-1 |
| chr1_4 | exon | 60784179 | 60784251 | 60784179 | ID=Msa0175000-mRNA-1:exon:19275;Parent=Msa0175000-mRNA-1 |
| chr1_4 | five_prime_UTR | 60784179 | 60784251 | 60784179 | ID=Msa0175000-mRNA-1:five_prime_utr;Parent=Msa0175000-mRNA-1 |
| chr1_4 | five_prime_UTR | 60779371 | 60779414 | 60779371 | ID=Msa0175000-mRNA-1:five_prime_utr;Parent=Msa0175000-mRNA-1 |
| chr1_4 | CDS | 60779368 | 60779370 | 60779368 | ID=Msa0175000-mRNA-1:cds;Parent=Msa0175000-mRNA-1 |
| chr1_4 | CDS | 60779129 | 60779289 | 60779129 | ID=Msa0175000-mRNA-1:cds;Parent=Msa0175000-mRNA-1 |
| chr1_4 | CDS | 60778788 | 60778976 | 60778788 | ID=Msa0175000-mRNA-1:cds;Parent=Msa0175000-mRNA-1 |
| chr1_4 | CDS | 60777729 | 60777834 | 60777729 | ID=Msa0175000-mRNA-1:cds;Parent=Msa0175000-mRNA-1 |
| chr1_4 | three_prime_UTR | 60777560 | 60777728 | 60777560 | ID=Msa0175000-mRNA-1:three_prime_utr;Parent=Msa0175000-mRNA-1 |
| chr1_4 | three_prime_UTR | 60777475 | 60777527 | 60777475 | ID=Msa0175000-mRNA-1:three_prime_utr;Parent=Msa0175000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
