Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278970 | XP_013444843.2 | 96.829 | 410 | 12 | 1 | 1 | 409 | 1 | 410 | 0.0 | 818 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278970 | sp|Q9M2D2|YU88_ARATH | 63.520 | 392 | 139 | 3 | 14 | 405 | 19 | 406 | 6.83e-173 | 492 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278970 | A0A396GMK3 | 96.829 | 410 | 12 | 1 | 1 | 409 | 1 | 410 | 0.0 | 818 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1278970 | -0.802314 | 5.949779e-49 | -8.615850e-47 |
| Msa0048510 | Msa1278970 | -0.820582 | 6.355436e-53 | -8.615850e-47 |
| Msa0077340 | Msa1278970 | -0.803331 | 3.668107e-49 | -8.615850e-47 |
| Msa0693340 | Msa1278970 | 0.822317 | 2.527034e-53 | -8.615850e-47 |
| Msa0734250 | Msa1278970 | -0.800406 | 1.463059e-48 | -8.615850e-47 |
| Msa0829300 | Msa1278970 | -0.801036 | 1.088160e-48 | -8.615850e-47 |
| Msa1278970 | Msa1318410 | 0.873163 | 1.819591e-67 | -8.615850e-47 |
| Msa1278970 | Msa1325410 | 0.821847 | 3.247165e-53 | -8.615850e-47 |
| Msa1278970 | Msa1340200 | -0.804665 | 1.936665e-49 | -8.615850e-47 |
| Msa1278970 | Msa1341840 | -0.806799 | 6.900954e-50 | -8.615850e-47 |
| Msa1278970 | Msa1356600 | 0.809258 | 2.068338e-50 | -8.615850e-47 |
| Msa1278970 | Msa1405460 | -0.802821 | 4.677518e-49 | -8.615850e-47 |
| Msa1278970 | Msa1464090 | -0.822784 | 1.968199e-53 | -8.615850e-47 |
| Msa0401970 | Msa1278970 | -0.811162 | 8.034606e-51 | -8.615850e-47 |
| Msa0244640 | Msa1278970 | -0.802013 | 6.863030e-49 | -8.615850e-47 |
| Msa0279690 | Msa1278970 | -0.814498 | 1.494246e-51 | -8.615850e-47 |
| Msa0298470 | Msa1278970 | -0.805740 | 1.153388e-49 | -8.615850e-47 |
| Msa1190180 | Msa1278970 | -0.820043 | 8.449531e-53 | -8.615850e-47 |
| Msa0529030 | Msa1278970 | -0.801254 | 9.819500e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278970 | MtrunA17_Chr8g0349011 | 96.829 | 410 | 12 | 1 | 1 | 409 | 1 | 410 | 0.0 | 818 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278970 | AT3G61320.1 | 63.520 | 392 | 139 | 3 | 14 | 405 | 19 | 406 | 6.94e-174 | 492 |
| Msa1278970 | AT3G61320.3 | 61.314 | 411 | 147 | 3 | 4 | 405 | 60 | 467 | 6.75e-173 | 492 |
| Msa1278970 | AT2G45870.1 | 60.000 | 380 | 147 | 3 | 34 | 409 | 32 | 410 | 1.43e-160 | 458 |
| Msa1278970 | AT3G61320.4 | 65.192 | 339 | 114 | 3 | 14 | 352 | 19 | 353 | 1.40e-150 | 431 |
| Msa1278970 | AT2G45870.3 | 62.848 | 323 | 115 | 3 | 34 | 352 | 32 | 353 | 1.51e-140 | 405 |
| Msa1278970 | AT3G61320.2 | 56.597 | 288 | 113 | 3 | 4 | 282 | 60 | 344 | 8.04e-100 | 301 |
| Msa1278970 | AT2G45870.2 | 56.863 | 255 | 105 | 3 | 34 | 284 | 32 | 285 | 1.88e-91 | 278 |
Find 111 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTTCTTGAATGTCTTTC+TGG | 0.021380 | 8_3:+15588212 | None:intergenic |
| AGGAAGTGTGTGTGGCATTT+TGG | 0.144774 | 8_3:+15591151 | None:intergenic |
| TGTGAGTTTGATTTGGTTAT+TGG | 0.165006 | 8_3:+15591195 | None:intergenic |
| AGTTTATATTTACATGATTA+TGG | 0.170266 | 8_3:+15587860 | None:intergenic |
| TGGCTTATGTGAACAGCTTC+TGG | 0.202848 | 8_3:-15589350 | Msa1278970:CDS |
| AGCAAAATTCTCTTCCATTT+AGG | 0.207491 | 8_3:+15588102 | None:intergenic |
| CTTCAAGGTTTCTTGTCTTA+TGG | 0.213922 | 8_3:-15589294 | Msa1278970:CDS |
| GCATTCCTCGTTCTTGGTTT+TGG | 0.221817 | 8_3:+15591002 | None:intergenic |
| TGTACGGAGGAGGGTGATTA+TGG | 0.237196 | 8_3:+15591042 | None:intergenic |
| AGGGGAGTTGGTTGGTGTGG+TGG | 0.264720 | 8_3:+15591293 | None:intergenic |
| GAGTTGGTTGGTGTGGTGGG+TGG | 0.265131 | 8_3:+15591297 | None:intergenic |
| GTGAGTTTGATTTGGTTATT+GGG | 0.275198 | 8_3:+15591196 | None:intergenic |
| GAATGTCTTTCTGGGCCTTT+TGG | 0.278304 | 8_3:+15588221 | None:intergenic |
| GAGCATTCGGCTACTAAAAT+TGG | 0.287044 | 8_3:-15589629 | Msa1278970:CDS |
| TTGGGGTGAATTGGGAAGTT+AGG | 0.291376 | 8_3:+15591170 | None:intergenic |
| CACTCTACAACCACACAAAC+TGG | 0.292794 | 8_3:-15590967 | Msa1278970:CDS |
| AAATCTATCCATAGTGCTTT+AGG | 0.304951 | 8_3:-15587925 | Msa1278970:three_prime_UTR |
| TCCTGCTCTTGCGTTGCTAT+TGG | 0.308883 | 8_3:-15590738 | Msa1278970:CDS |
| TGGCTGGCCTAGCTCCTAAA+TGG | 0.330706 | 8_3:-15588116 | Msa1278970:exon |
| AGGGGAGGAGGGTTAGTTGT+TGG | 0.339455 | 8_3:+15591128 | None:intergenic |
| TGCTTCTTGAATGTCTTTCT+GGG | 0.339634 | 8_3:+15588213 | None:intergenic |
| CATATACCCGTCTTACTTCA+AGG | 0.343283 | 8_3:-15589309 | Msa1278970:CDS |
| ACTTGTTTCCATGATGGAAT+TGG | 0.348735 | 8_3:-15589370 | Msa1278970:CDS |
| CAATCATCCCAAAGTATGAT+AGG | 0.352692 | 8_3:+15589259 | None:intergenic |
| ACCAGATTGAGGATTTCTTT+AGG | 0.357650 | 8_3:-15587958 | Msa1278970:three_prime_UTR |
| GGGGAGTTGGTTGGTGTGGT+GGG | 0.358146 | 8_3:+15591294 | None:intergenic |
| CAAAGAGGCAGCACTGATAA+AGG | 0.360465 | 8_3:+15589213 | None:intergenic |
| AGTTGGTTGGTGTGGTGGGT+GGG | 0.366630 | 8_3:+15591298 | None:intergenic |
| TACTTTGGGATGATTGTCAT+TGG | 0.371618 | 8_3:-15589252 | Msa1278970:CDS |
| AAGAATACCTTAAGAACAAT+AGG | 0.378297 | 8_3:+15590545 | None:intergenic |
| TTAGGTTTGTGAGTTTGATT+TGG | 0.383930 | 8_3:+15591188 | None:intergenic |
| CGTCTGGTTCCATTACTTGC+CGG | 0.396905 | 8_3:-15590810 | Msa1278970:CDS |
| GACGCTCCCTATCATACTTT+GGG | 0.402973 | 8_3:-15589266 | Msa1278970:CDS |
| TGACGCTCCCTATCATACTT+TGG | 0.409664 | 8_3:-15589267 | Msa1278970:CDS |
| AGTTTATATCACAGAGCATT+CGG | 0.423636 | 8_3:-15589642 | Msa1278970:CDS |
| AATATACTCCTAAAGCACTA+TGG | 0.425954 | 8_3:+15587917 | None:intergenic |
| GGCTTATGTGAACAGCTTCT+GGG | 0.429998 | 8_3:-15589349 | Msa1278970:CDS |
| TCCTAAAGAAATCCTCAATC+TGG | 0.432503 | 8_3:+15587957 | None:intergenic |
| GCAGGAGCAGTAAGCTGATA+AGG | 0.432959 | 8_3:+15590755 | None:intergenic |
| AAAGAAGTGAAGAAGAGAAC+AGG | 0.435786 | 8_3:+15590863 | None:intergenic |
| TTAAGTGCAAGCATTGGAAA+TGG | 0.446400 | 8_3:+15588253 | None:intergenic |
| TATTGATGATGAAGAGGAGA+GGG | 0.449309 | 8_3:+15591274 | None:intergenic |
| GAGAGGGGAGTTGGTTGGTG+TGG | 0.450598 | 8_3:+15591290 | None:intergenic |
| TAGCCACATTAATTGTGGTT+AGG | 0.453740 | 8_3:-15588024 | Msa1278970:three_prime_UTR |
| TGATTTGGTTATTGGGAGGA+TGG | 0.458733 | 8_3:+15591203 | None:intergenic |
| TTCTCTTCCATTTAGGAGCT+AGG | 0.463417 | 8_3:+15588109 | None:intergenic |
| CCGCTTACAACTCCGCCGTC+TGG | 0.465961 | 8_3:-15590826 | Msa1278970:CDS |
| AGCGAAGAAGCTCGTAGCAC+AGG | 0.467896 | 8_3:+15590779 | None:intergenic |
| ATGCAGTGTCATGTGTTGTA+TGG | 0.471216 | 8_3:-15589757 | Msa1278970:intron |
| GGAGGAGGGTTAGTTGTTGG+AGG | 0.476818 | 8_3:+15591131 | None:intergenic |
| AAGATCACTTGTTTCCATGA+TGG | 0.486583 | 8_3:-15589376 | Msa1278970:CDS |
| TCCTCCGTACAATCCCAGAC+TGG | 0.489039 | 8_3:-15591030 | Msa1278970:CDS |
| ACCAATAGCAACGCAAGAGC+AGG | 0.492418 | 8_3:+15590737 | None:intergenic |
| GATGAAGAGGAGAGGGGAGT+TGG | 0.497034 | 8_3:+15591281 | None:intergenic |
| GCTACACTTGCACCAGATTG+AGG | 0.498225 | 8_3:-15587969 | Msa1278970:three_prime_UTR |
| TTGTTGAAGGGAAGAAAGCT+TGG | 0.502301 | 8_3:-15590685 | Msa1278970:CDS |
| TCTAAAGAGCATTCACCAAA+TGG | 0.503162 | 8_3:-15588136 | Msa1278970:CDS |
| TCTTATGCTAGATTTGTTGA+AGG | 0.508587 | 8_3:-15590698 | Msa1278970:CDS |
| GGATTCTAGAAGAAGTATCT+TGG | 0.512856 | 8_3:-15589605 | Msa1278970:intron |
| CATTCGGCTACTAAAATTGG+AGG | 0.521365 | 8_3:-15589626 | Msa1278970:CDS |
| CGGGTATATGATAACGGAAT+CGG | 0.522844 | 8_3:+15589322 | None:intergenic |
| AAGAGGAGAGGGGAGTTGGT+TGG | 0.524276 | 8_3:+15591285 | None:intergenic |
| CTGCCCAGTCTGGGATTGTA+CGG | 0.524923 | 8_3:+15591026 | None:intergenic |
| TGAGAATATTGATGATGAAG+AGG | 0.527594 | 8_3:+15591268 | None:intergenic |
| AAGCACTATGGATAGATTTG+AGG | 0.528579 | 8_3:+15587929 | None:intergenic |
| TTGTATAGCCACATTAATTG+TGG | 0.530594 | 8_3:-15588029 | Msa1278970:three_prime_UTR |
| AGTCTGGGATTGTACGGAGG+AGG | 0.530882 | 8_3:+15591032 | None:intergenic |
| GTAGGTTGGAGTTCTTATAG+AGG | 0.537255 | 8_3:-15588278 | Msa1278970:intron |
| ACTTAATGATCTCTGCCAAA+AGG | 0.538988 | 8_3:-15588236 | Msa1278970:CDS |
| GCACGTGACGGAGGGAGGAA+CGG | 0.547211 | 8_3:+15590936 | None:intergenic |
| AAGAGCATTCACCAAATGGC+TGG | 0.548531 | 8_3:-15588132 | Msa1278970:CDS |
| AGTATATTCTGCTAATGTAG+TGG | 0.549596 | 8_3:-15587902 | Msa1278970:three_prime_UTR |
| CAAGAAACCTTGAAGTAAGA+CGG | 0.551894 | 8_3:+15589302 | None:intergenic |
| CTTATGCTAGATTTGTTGAA+GGG | 0.552693 | 8_3:-15590697 | Msa1278970:CDS |
| GCAGCACTGATAAAGGTAGC+AGG | 0.553615 | 8_3:+15589220 | None:intergenic |
| ATTGATGATGAAGAGGAGAG+GGG | 0.554791 | 8_3:+15591275 | None:intergenic |
| AAGAAACCTTGAAGTAAGAC+GGG | 0.556854 | 8_3:+15589303 | None:intergenic |
| CACATAAGCCAATTCCATCA+TGG | 0.557282 | 8_3:+15589362 | None:intergenic |
| GTAAGACGGGTATATGATAA+CGG | 0.559042 | 8_3:+15589316 | None:intergenic |
| AAAGTGACGCACGTGACGGA+GGG | 0.559488 | 8_3:+15590928 | None:intergenic |
| TTGAGATGGTGAAAGAGAAG+AGG | 0.560320 | 8_3:+15591230 | None:intergenic |
| TACTGTTGATGTGAGTGGGA+AGG | 0.560902 | 8_3:-15590615 | Msa1278970:CDS |
| ACTGTTGATGTGAGTGGGAA+GGG | 0.565384 | 8_3:-15590614 | Msa1278970:CDS |
| GTATATTCTGCTAATGTAGT+GGG | 0.565506 | 8_3:-15587901 | Msa1278970:three_prime_UTR |
| GAAGTGAAGAAGAGAACAGG+AGG | 0.569132 | 8_3:+15590866 | None:intergenic |
| ATATTGATGATGAAGAGGAG+AGG | 0.570033 | 8_3:+15591273 | None:intergenic |
| AGATCATTAAGTGCAAGCAT+TGG | 0.571323 | 8_3:+15588247 | None:intergenic |
| AATCATCCCAAAGTATGATA+GGG | 0.572755 | 8_3:+15589260 | None:intergenic |
| TGGCTACTGTTGATGTGAGT+GGG | 0.573291 | 8_3:-15590619 | Msa1278970:CDS |
| GTTGTTGGAGGAAGTGTGTG+TGG | 0.574566 | 8_3:+15591143 | None:intergenic |
| AGTTTGATTTGGTTATTGGG+AGG | 0.587844 | 8_3:+15591199 | None:intergenic |
| TTGGTGAATGCTCTTTAGAG+TGG | 0.597298 | 8_3:+15588140 | None:intergenic |
| ACTCTACAACCACACAAACT+GGG | 0.602994 | 8_3:-15590966 | Msa1278970:CDS |
| GTCTGGGATTGTACGGAGGA+GGG | 0.608407 | 8_3:+15591033 | None:intergenic |
| GTGACGCACGTGACGGAGGG+AGG | 0.608794 | 8_3:+15590931 | None:intergenic |
| AAAAGTGACGCACGTGACGG+AGG | 0.611743 | 8_3:+15590927 | None:intergenic |
| ATGGCTACTGTTGATGTGAG+TGG | 0.618185 | 8_3:-15590620 | Msa1278970:CDS |
| GGGAGGATGGTACATTGAGA+TGG | 0.625123 | 8_3:+15591216 | None:intergenic |
| GTTCCTAACCACAATTAATG+TGG | 0.626611 | 8_3:+15588021 | None:intergenic |
| TTCTTCAATGCAGAACAAAG+AGG | 0.637682 | 8_3:+15589198 | None:intergenic |
| GGTGTGTGACCCAGTTTGTG+TGG | 0.646028 | 8_3:+15590957 | None:intergenic |
| GAACAGGAGGGACTAAAGAG+AGG | 0.649071 | 8_3:+15590879 | None:intergenic |
| GTTGTAAGCGGCGATGACAG+CGG | 0.654951 | 8_3:+15590838 | None:intergenic |
| CCAGACGGCGGAGTTGTAAG+CGG | 0.658004 | 8_3:+15590826 | None:intergenic |
| CCCAGTCTGGGATTGTACGG+AGG | 0.658078 | 8_3:+15591029 | None:intergenic |
| AAGTGAAGAAGAGAACAGGA+GGG | 0.692777 | 8_3:+15590867 | None:intergenic |
| TAAAGAGAGGATGACACGTG+AGG | 0.708230 | 8_3:+15590892 | None:intergenic |
| CAAGTAATGGAACCAGACGG+CGG | 0.715460 | 8_3:+15590814 | None:intergenic |
| CGGCAAGTAATGGAACCAGA+CGG | 0.716242 | 8_3:+15590811 | None:intergenic |
| GCAGACCAAAACCAAGAACG+AGG | 0.744295 | 8_3:-15591007 | Msa1278970:CDS |
| ATAAACTCAATAATGCAGCG+AGG | 0.784829 | 8_3:+15589658 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATGTTTAAATTTGT+TGG | + | chr8_3:15590353-15590372 | None:intergenic | 10.0% |
| !! | ATTAAATATTTGGTATATTA+TGG | - | chr8_3:15590610-15590629 | Msa1278970:CDS | 10.0% |
| !!! | AAAATTTCAATAATTACTTT+TGG | + | chr8_3:15590823-15590842 | None:intergenic | 10.0% |
| !! | ATAAAACAAACCAAAATTAA+GGG | + | chr8_3:15588969-15588988 | None:intergenic | 15.0% |
| !! | AATAAAACAAACCAAAATTA+AGG | + | chr8_3:15588970-15588989 | None:intergenic | 15.0% |
| !! | ATTATATCATTAGGAAAAAA+GGG | + | chr8_3:15589177-15589196 | None:intergenic | 15.0% |
| !! | TTGATATATTTAAATAGTCT+AGG | + | chr8_3:15590045-15590064 | None:intergenic | 15.0% |
| !!! | GATGATAGTTTTTTTTTTTA+AGG | - | chr8_3:15590141-15590160 | Msa1278970:intron | 15.0% |
| !!! | AATTTTTTTGGAATATCTTA+TGG | - | chr8_3:15590570-15590589 | Msa1278970:CDS | 15.0% |
| !! | TACCAAATATTTAATATGTA+AGG | + | chr8_3:15590605-15590624 | None:intergenic | 15.0% |
| !! | AGTTTATATTTACATGATTA+TGG | + | chr8_3:15591336-15591355 | None:intergenic | 15.0% |
| !! | TAGTTATAAGTTATGAAACA+TGG | - | chr8_3:15588742-15588761 | Msa1278970:intron | 20.0% |
| !!! | TGTGTTTAAGTTTTTAAAGT+TGG | - | chr8_3:15588999-15589018 | Msa1278970:intron | 20.0% |
| !!! | GTAATGTTTTATGAAGTTTT+AGG | - | chr8_3:15589071-15589090 | Msa1278970:intron | 20.0% |
| !! | TTATATCATTAGGAAAAAAG+GGG | + | chr8_3:15589176-15589195 | None:intergenic | 20.0% |
| !! | CATTATATCATTAGGAAAAA+AGG | + | chr8_3:15589178-15589197 | None:intergenic | 20.0% |
| !!! | TTTTCCTAATGATATAATGA+AGG | - | chr8_3:15589179-15589198 | Msa1278970:intron | 20.0% |
| !! | TTTCCTAATGATATAATGAA+GGG | - | chr8_3:15589180-15589199 | Msa1278970:intron | 20.0% |
| !! | TTGCTATATCATTGATAAAA+GGG | + | chr8_3:15589320-15589339 | None:intergenic | 20.0% |
| !!! | TTTGCTATATCATTGATAAA+AGG | + | chr8_3:15589321-15589340 | None:intergenic | 20.0% |
| !!! | TTGTATAGAGTAAACTTTTT+GGG | - | chr8_3:15589366-15589385 | Msa1278970:CDS | 20.0% |
| !! | CAAAACTACATATTGAATTT+AGG | - | chr8_3:15589636-15589655 | Msa1278970:CDS | 20.0% |
| !!! | AATTAATTTAAGGGTAGTTT+TGG | - | chr8_3:15590267-15590286 | Msa1278970:intron | 20.0% |
| !! | ACAAACAAATGTTAAAAGAT+AGG | - | chr8_3:15590486-15590505 | Msa1278970:intron | 20.0% |
| !! | GTCCTTACATATTAAATATT+TGG | - | chr8_3:15590600-15590619 | Msa1278970:CDS | 20.0% |
| !! | TTCATCTGTTAAAATAGATT+TGG | - | chr8_3:15590767-15590786 | Msa1278970:CDS | 20.0% |
| !!! | AATTTTCACTGTTAAAATGA+TGG | - | chr8_3:15590837-15590856 | Msa1278970:CDS | 20.0% |
| !! | ATTATGGTTTTTATTGGAGT+GGG | + | chr8_3:15588138-15588157 | None:intergenic | 25.0% |
| ! | AAGAATACCTTAAGAACAAT+AGG | + | chr8_3:15588651-15588670 | None:intergenic | 25.0% |
| ! | TTGAGGTTAAAATAGTTCAA+CGG | - | chr8_3:15588932-15588951 | Msa1278970:intron | 25.0% |
| !!! | TGTTTTATGAAGTTTTAGGA+TGG | - | chr8_3:15589075-15589094 | Msa1278970:intron | 25.0% |
| !!! | TTGTTTAGAGCAAGTTTTTT+GGG | - | chr8_3:15589225-15589244 | Msa1278970:CDS | 25.0% |
| !! | GTTGTATAGAGTAAACTTTT+TGG | - | chr8_3:15589365-15589384 | Msa1278970:CDS | 25.0% |
| ! | AACACATAAATTTACGTTTC+TGG | + | chr8_3:15589691-15589710 | None:intergenic | 25.0% |
| !! | TGAAATTAGGTATTTTCTGA+TGG | + | chr8_3:15590110-15590129 | None:intergenic | 25.0% |
| ! | TAATCTACCCCTAATTATAA+TGG | - | chr8_3:15590222-15590241 | Msa1278970:intron | 25.0% |
| ! | AGTCAAATATAAGCAAATGT+TGG | + | chr8_3:15590330-15590349 | None:intergenic | 25.0% |
| !!! | AGTGGACTGTATAATTTTTT+TGG | - | chr8_3:15590558-15590577 | Msa1278970:CDS | 25.0% |
| !!! | AAATTAAAGTCTCTAGCTTT+GGG | + | chr8_3:15590662-15590681 | None:intergenic | 25.0% |
| ! | ATGTGAAAAATGATTGATGT+AGG | - | chr8_3:15590897-15590916 | Msa1278970:CDS | 25.0% |
| !! | TTCTTCAATTTTTGCTTATG+AGG | - | chr8_3:15591123-15591142 | Msa1278970:CDS | 25.0% |
| !! | TGAGAATATTGATGATGAAG+AGG | + | chr8_3:15587928-15587947 | None:intergenic | 30.0% |
| !! | GTGAGTTTGATTTGGTTATT+GGG | + | chr8_3:15588000-15588019 | None:intergenic | 30.0% |
| !! | TGTGAGTTTGATTTGGTTAT+TGG | + | chr8_3:15588001-15588020 | None:intergenic | 30.0% |
| TTAGGTTTGTGAGTTTGATT+TGG | + | chr8_3:15588008-15588027 | None:intergenic | 30.0% | |
| ! | TTATGGTTTTTATTGGAGTG+GGG | + | chr8_3:15588137-15588156 | None:intergenic | 30.0% |
| ! | GATTATGGTTTTTATTGGAG+TGG | + | chr8_3:15588139-15588158 | None:intergenic | 30.0% |
| ! | AGGGTGATTATGGTTTTTAT+TGG | + | chr8_3:15588144-15588163 | None:intergenic | 30.0% |
| !! | TCTTATGCTAGATTTGTTGA+AGG | - | chr8_3:15588495-15588514 | Msa1278970:intron | 30.0% |
| !! | CTTATGCTAGATTTGTTGAA+GGG | - | chr8_3:15588496-15588515 | Msa1278970:intron | 30.0% |
| !!! | TGATTTTGCTAGACTTGTTA+TGG | - | chr8_3:15588554-15588573 | Msa1278970:intron | 30.0% |
| ! | TGCTTTTCCTATTGTTCTTA+AGG | - | chr8_3:15588641-15588660 | Msa1278970:intron | 30.0% |
| ATAACTAATGCAATAACAGC+AGG | + | chr8_3:15588729-15588748 | None:intergenic | 30.0% | |
| TAAAATAGTTCAACGGTCAT+TGG | - | chr8_3:15588939-15588958 | Msa1278970:intron | 30.0% | |
| AAAATAGTTCAACGGTCATT+GGG | - | chr8_3:15588940-15588959 | Msa1278970:intron | 30.0% | |
| GTTACTACATGATAGTTCAA+TGG | - | chr8_3:15589021-15589040 | Msa1278970:intron | 30.0% | |
| ! | GTTGAGTTTTTACATGCTTA+TGG | - | chr8_3:15589121-15589140 | Msa1278970:intron | 30.0% |
| ACACCCTTCATTATATCATT+AGG | + | chr8_3:15589186-15589205 | None:intergenic | 30.0% | |
| !!! | GTTGTTTAGAGCAAGTTTTT+TGG | - | chr8_3:15589224-15589243 | Msa1278970:CDS | 30.0% |
| AGTCTTAAGTCTGAACAAAA+TGG | + | chr8_3:15589293-15589312 | None:intergenic | 30.0% | |
| !! | CTGCATTGAAAGTATTCAAA+TGG | + | chr8_3:15589422-15589441 | None:intergenic | 30.0% |
| ! | AGTTTATATCACAGAGCATT+CGG | - | chr8_3:15589551-15589570 | Msa1278970:intron | 30.0% |
| CGTAAATTTATGTGTTTCCT+TGG | - | chr8_3:15589695-15589714 | Msa1278970:CDS | 30.0% | |
| AATTTGTATCCAACACTTCT+TGG | + | chr8_3:15589729-15589748 | None:intergenic | 30.0% | |
| TTCAAACATTTCCCTATTTG+CGG | - | chr8_3:15589783-15589802 | Msa1278970:intron | 30.0% | |
| AATCATCCCAAAGTATGATA+GGG | + | chr8_3:15589936-15589955 | None:intergenic | 30.0% | |
| ! | AATAGTCTAGGATTGAAGTA+AGG | + | chr8_3:15590033-15590052 | None:intergenic | 30.0% |
| ACCTAATTTCACACTTACTA+AGG | - | chr8_3:15590119-15590138 | Msa1278970:intron | 30.0% | |
| TCCTTAGTAAGTGTGAAATT+AGG | + | chr8_3:15590123-15590142 | None:intergenic | 30.0% | |
| CAGATGACCATTATAATTAG+GGG | + | chr8_3:15590232-15590251 | None:intergenic | 30.0% | |
| GCAGATGACCATTATAATTA+GGG | + | chr8_3:15590233-15590252 | None:intergenic | 30.0% | |
| AGCAGATGACCATTATAATT+AGG | + | chr8_3:15590234-15590253 | None:intergenic | 30.0% | |
| TCTTTCCTTTGTAATTCATC+AGG | - | chr8_3:15590446-15590465 | Msa1278970:intron | 30.0% | |
| TTTCACCTGATGAATTACAA+AGG | + | chr8_3:15590454-15590473 | None:intergenic | 30.0% | |
| ! | CAAATTAAAGTCTCTAGCTT+TGG | + | chr8_3:15590663-15590682 | None:intergenic | 30.0% |
| !! | GTTTTGCACTGATAGAAATT+TGG | - | chr8_3:15590682-15590701 | Msa1278970:CDS | 30.0% |
| CAACTTGTGTGATTTCAATA+TGG | + | chr8_3:15590718-15590737 | None:intergenic | 30.0% | |
| GAAAAATGATTGATGTAGGT+TGG | - | chr8_3:15590901-15590920 | Msa1278970:CDS | 30.0% | |
| AGCAAAATTCTCTTCCATTT+AGG | + | chr8_3:15591094-15591113 | None:intergenic | 30.0% | |
| ! | TTCAATTTTTGCTTATGAGG+TGG | - | chr8_3:15591126-15591145 | Msa1278970:CDS | 30.0% |
| TTGTATAGCCACATTAATTG+TGG | - | chr8_3:15591164-15591183 | Msa1278970:CDS | 30.0% | |
| AAATCTATCCATAGTGCTTT+AGG | - | chr8_3:15591268-15591287 | Msa1278970:five_prime_UTR | 30.0% | |
| ! | AATATACTCCTAAAGCACTA+TGG | + | chr8_3:15591279-15591298 | None:intergenic | 30.0% |
| AGTATATTCTGCTAATGTAG+TGG | - | chr8_3:15591291-15591310 | Msa1278970:five_prime_UTR | 30.0% | |
| GTATATTCTGCTAATGTAGT+GGG | - | chr8_3:15591292-15591311 | Msa1278970:five_prime_UTR | 30.0% | |
| !! | TATTGATGATGAAGAGGAGA+GGG | + | chr8_3:15587922-15587941 | None:intergenic | 35.0% |
| !! | ATATTGATGATGAAGAGGAG+AGG | + | chr8_3:15587923-15587942 | None:intergenic | 35.0% |
| !! | AGTTTGATTTGGTTATTGGG+AGG | + | chr8_3:15587997-15588016 | None:intergenic | 35.0% |
| !! | TGTTTGTAGGATTTTGAGGA+GGG | + | chr8_3:15588087-15588106 | None:intergenic | 35.0% |
| ! | TATGGTTTTTATTGGAGTGG+GGG | + | chr8_3:15588136-15588155 | None:intergenic | 35.0% |
| !!! | TTTTTTGCATTCCTCGTTCT+TGG | + | chr8_3:15588200-15588219 | None:intergenic | 35.0% |
| AAAGAAGTGAAGAAGAGAAC+AGG | + | chr8_3:15588333-15588352 | None:intergenic | 35.0% | |
| !!! | GGGTGATTTTCAAGTTAAGA+AGG | - | chr8_3:15588599-15588618 | Msa1278970:intron | 35.0% |
| TATTAGCAGTGTCTATGTGT+CGG | + | chr8_3:15588783-15588802 | None:intergenic | 35.0% | |
| ! | CATTGGGTATCCCTTAATTT+TGG | - | chr8_3:15588956-15588975 | Msa1278970:intron | 35.0% |
| ! | AGACTTGGTTTCATGTTTGT+TGG | - | chr8_3:15589146-15589165 | Msa1278970:intron | 35.0% |
| ! | GACTTGGTTTCATGTTTGTT+GGG | - | chr8_3:15589147-15589166 | Msa1278970:intron | 35.0% |
| !!! | TTAGAGCAAGTTTTTTGGGT+TGG | - | chr8_3:15589229-15589248 | Msa1278970:CDS | 35.0% |
| !! | ATAGAGTAAACTTTTTGGGC+TGG | - | chr8_3:15589370-15589389 | Msa1278970:CDS | 35.0% |
| ATAAACTCAATAATGCAGCG+AGG | + | chr8_3:15589538-15589557 | None:intergenic | 35.0% | |
| !! | GGATTCTAGAAGAAGTATCT+TGG | - | chr8_3:15589588-15589607 | Msa1278970:intron | 35.0% |
| ! | TATGTGTTTCCTTGGTAATC+AGG | - | chr8_3:15589703-15589722 | Msa1278970:CDS | 35.0% |
| AAGATCACTTGTTTCCATGA+TGG | - | chr8_3:15589817-15589836 | Msa1278970:intron | 35.0% | |
| ! | ACTTGTTTCCATGATGGAAT+TGG | - | chr8_3:15589823-15589842 | Msa1278970:intron | 35.0% |
| GTAAGACGGGTATATGATAA+CGG | + | chr8_3:15589880-15589899 | None:intergenic | 35.0% | |
| AAGAAACCTTGAAGTAAGAC+GGG | + | chr8_3:15589893-15589912 | None:intergenic | 35.0% | |
| CAAGAAACCTTGAAGTAAGA+CGG | + | chr8_3:15589894-15589913 | None:intergenic | 35.0% | |
| CTTCAAGGTTTCTTGTCTTA+TGG | - | chr8_3:15589899-15589918 | Msa1278970:intron | 35.0% | |
| CAATCATCCCAAAGTATGAT+AGG | + | chr8_3:15589937-15589956 | None:intergenic | 35.0% | |
| !! | TACTTTGGGATGATTGTCAT+TGG | - | chr8_3:15589941-15589960 | Msa1278970:intron | 35.0% |
| TTCTTCAATGCAGAACAAAG+AGG | + | chr8_3:15589998-15590017 | None:intergenic | 35.0% | |
| ! | TATTTTCTGATGGTTGAGTC+CGG | + | chr8_3:15590100-15590119 | None:intergenic | 35.0% |
| CTGTAATAGTCTAAAGATCC+TGG | + | chr8_3:15590418-15590437 | None:intergenic | 35.0% | |
| ! | AGCAGTTAGATTTTTGTGAG+TGG | - | chr8_3:15590540-15590559 | Msa1278970:intron | 35.0% |
| ! | TATATTATGGACTGCACTTC+TGG | - | chr8_3:15590623-15590642 | Msa1278970:CDS | 35.0% |
| CAGAGTTCAGTTTAGATTTG+GGG | + | chr8_3:15590800-15590819 | None:intergenic | 35.0% | |
| GCAGAGTTCAGTTTAGATTT+GGG | + | chr8_3:15590801-15590820 | None:intergenic | 35.0% | |
| !! | TTAAGTGCAAGCATTGGAAA+TGG | + | chr8_3:15590943-15590962 | None:intergenic | 35.0% |
| AGATCATTAAGTGCAAGCAT+TGG | + | chr8_3:15590949-15590968 | None:intergenic | 35.0% | |
| ACTTAATGATCTCTGCCAAA+AGG | - | chr8_3:15590957-15590976 | Msa1278970:CDS | 35.0% | |
| TGCTTCTTGAATGTCTTTCT+GGG | + | chr8_3:15590983-15591002 | None:intergenic | 35.0% | |
| TTGCTTCTTGAATGTCTTTC+TGG | + | chr8_3:15590984-15591003 | None:intergenic | 35.0% | |
| !! | TCTAAAGAGCATTCACCAAA+TGG | - | chr8_3:15591057-15591076 | Msa1278970:CDS | 35.0% |
| TAGCCACATTAATTGTGGTT+AGG | - | chr8_3:15591169-15591188 | Msa1278970:CDS | 35.0% | |
| GTTCCTAACCACAATTAATG+TGG | + | chr8_3:15591175-15591194 | None:intergenic | 35.0% | |
| ACCAGATTGAGGATTTCTTT+AGG | - | chr8_3:15591235-15591254 | Msa1278970:five_prime_UTR | 35.0% | |
| TCCTAAAGAAATCCTCAATC+TGG | + | chr8_3:15591239-15591258 | None:intergenic | 35.0% | |
| AAGCACTATGGATAGATTTG+AGG | + | chr8_3:15591267-15591286 | None:intergenic | 35.0% | |
| !! | ATTGATGATGAAGAGGAGAG+GGG | + | chr8_3:15587921-15587940 | None:intergenic | 40.0% |
| TTGAGATGGTGAAAGAGAAG+AGG | + | chr8_3:15587966-15587985 | None:intergenic | 40.0% | |
| !! | TGATTTGGTTATTGGGAGGA+TGG | + | chr8_3:15587993-15588012 | None:intergenic | 40.0% |
| !! | GTTTGTAGGATTTTGAGGAG+GGG | + | chr8_3:15588086-15588105 | None:intergenic | 40.0% |
| !! | GTGTTTGTAGGATTTTGAGG+AGG | + | chr8_3:15588088-15588107 | None:intergenic | 40.0% |
| ! | GGTGTGTTTGTAGGATTTTG+AGG | + | chr8_3:15588091-15588110 | None:intergenic | 40.0% |
| !! | TTTTATGGGGGTGTGTTTGT+AGG | + | chr8_3:15588100-15588119 | None:intergenic | 40.0% |
| ! | AGGTGTGGAACATTTTATGG+GGG | + | chr8_3:15588112-15588131 | None:intergenic | 40.0% |
| ! | GAGGTGTGGAACATTTTATG+GGG | + | chr8_3:15588113-15588132 | None:intergenic | 40.0% |
| !! | GGAGGTGTGGAACATTTTAT+GGG | + | chr8_3:15588114-15588133 | None:intergenic | 40.0% |
| ! | ATGGTTTTTATTGGAGTGGG+GGG | + | chr8_3:15588135-15588154 | None:intergenic | 40.0% |
| ACTCTACAACCACACAAACT+GGG | - | chr8_3:15588227-15588246 | Msa1278970:CDS | 40.0% | |
| AAGTGAAGAAGAGAACAGGA+GGG | + | chr8_3:15588329-15588348 | None:intergenic | 40.0% | |
| GAAAAAACTCCGGCAAGTAA+TGG | + | chr8_3:15588395-15588414 | None:intergenic | 40.0% | |
| !!! | TTGCGTTGCTATTGGTTTTC+AGG | - | chr8_3:15588463-15588482 | Msa1278970:intron | 40.0% |
| !!! | GTTGCTATTGGTTTTCAGGA+CGG | - | chr8_3:15588467-15588486 | Msa1278970:intron | 40.0% |
| TTGTTGAAGGGAAGAAAGCT+TGG | - | chr8_3:15588508-15588527 | Msa1278970:intron | 40.0% | |
| GTCACGAGGCTAATTCAATT+TGG | - | chr8_3:15588877-15588896 | Msa1278970:intron | 40.0% | |
| GCTGTAAGTTGTGCATAGTT+GGG | - | chr8_3:15588899-15588918 | Msa1278970:intron | 40.0% | |
| !! | AGTTGGGTTGAAGTTGTTTG+AGG | - | chr8_3:15588915-15588934 | Msa1278970:intron | 40.0% |
| !!! | TGAAGTTTTAGGATGGCAGT+CGG | - | chr8_3:15589082-15589101 | Msa1278970:intron | 40.0% |
| TACATGCTTATGGTCAGACT+TGG | - | chr8_3:15589131-15589150 | Msa1278970:intron | 40.0% | |
| !! | TATAATGAAGGGTGTCTGCA+AGG | - | chr8_3:15589191-15589210 | Msa1278970:intron | 40.0% |
| TATAGCAAAGCTTGTCTGCA+AGG | - | chr8_3:15589332-15589351 | Msa1278970:CDS | 40.0% | |
| ATGCAGTGTCATGTGTTGTA+TGG | - | chr8_3:15589436-15589455 | Msa1278970:intron | 40.0% | |
| GAGCATTCGGCTACTAAAAT+TGG | - | chr8_3:15589564-15589583 | Msa1278970:intron | 40.0% | |
| CATTCGGCTACTAAAATTGG+AGG | - | chr8_3:15589567-15589586 | Msa1278970:intron | 40.0% | |
| TGATTCCTGTACCGCAAATA+GGG | + | chr8_3:15589797-15589816 | None:intergenic | 40.0% | |
| TTGATTCCTGTACCGCAAAT+AGG | + | chr8_3:15589798-15589817 | None:intergenic | 40.0% | |
| CACATAAGCCAATTCCATCA+TGG | + | chr8_3:15589834-15589853 | None:intergenic | 40.0% | |
| !! | CGGGTATATGATAACGGAAT+CGG | + | chr8_3:15589874-15589893 | None:intergenic | 40.0% |
| CATATACCCGTCTTACTTCA+AGG | - | chr8_3:15589884-15589903 | Msa1278970:intron | 40.0% | |
| ! | TCTAGGATTGAAGTAAGGTG+AGG | + | chr8_3:15590028-15590047 | None:intergenic | 40.0% |
| ACGTTGTAGTTAACAGAACC+AGG | - | chr8_3:15590397-15590416 | Msa1278970:intron | 40.0% | |
| ATTCTGCAGTCTGTTCTGTT+TGG | + | chr8_3:15590741-15590760 | None:intergenic | 40.0% | |
| GGCAGAGTTCAGTTTAGATT+TGG | + | chr8_3:15590802-15590821 | None:intergenic | 40.0% | |
| ! | GTAGGTTGGAGTTCTTATAG+AGG | - | chr8_3:15590915-15590934 | Msa1278970:CDS | 40.0% |
| ! | GTGCGCATGAATCACATTTT+CGG | + | chr8_3:15591013-15591032 | None:intergenic | 40.0% |
| !! | GGTAGTTTTGCTTTGCAACA+AGG | + | chr8_3:15591035-15591054 | None:intergenic | 40.0% |
| ! | TTGGTGAATGCTCTTTAGAG+TGG | + | chr8_3:15591056-15591075 | None:intergenic | 40.0% |
| TTCTCTTCCATTTAGGAGCT+AGG | + | chr8_3:15591087-15591106 | None:intergenic | 40.0% | |
| TTGGGGTGAATTGGGAAGTT+AGG | + | chr8_3:15588026-15588045 | None:intergenic | 45.0% | |
| !!! | GTGGCATTTTGGGGTGAATT+GGG | + | chr8_3:15588034-15588053 | None:intergenic | 45.0% |
| !!! | TGTGGCATTTTGGGGTGAAT+TGG | + | chr8_3:15588035-15588054 | None:intergenic | 45.0% |
| ! | GAAGTGTGTGTGGCATTTTG+GGG | + | chr8_3:15588043-15588062 | None:intergenic | 45.0% |
| !! | GGAAGTGTGTGTGGCATTTT+GGG | + | chr8_3:15588044-15588063 | None:intergenic | 45.0% |
| !! | AGGAAGTGTGTGTGGCATTT+TGG | + | chr8_3:15588045-15588064 | None:intergenic | 45.0% |
| !! | GGGAGGTGTGGAACATTTTA+TGG | + | chr8_3:15588115-15588134 | None:intergenic | 45.0% |
| ! | GCATTCCTCGTTCTTGGTTT+TGG | + | chr8_3:15588194-15588213 | None:intergenic | 45.0% |
| CACTCTACAACCACACAAAC+TGG | - | chr8_3:15588226-15588245 | Msa1278970:CDS | 45.0% | |
| AGAAAAAGTGACGCACGTGA+CGG | + | chr8_3:15588272-15588291 | None:intergenic | 45.0% | |
| TAAAGAGAGGATGACACGTG+AGG | + | chr8_3:15588304-15588323 | None:intergenic | 45.0% | |
| GAAGTGAAGAAGAGAACAGG+AGG | + | chr8_3:15588330-15588349 | None:intergenic | 45.0% | |
| CGTAGCACAGGAAAAAACTC+CGG | + | chr8_3:15588405-15588424 | None:intergenic | 45.0% | |
| ATGGCTACTGTTGATGTGAG+TGG | - | chr8_3:15588573-15588592 | Msa1278970:intron | 45.0% | |
| TGGCTACTGTTGATGTGAGT+GGG | - | chr8_3:15588574-15588593 | Msa1278970:intron | 45.0% | |
| TACTGTTGATGTGAGTGGGA+AGG | - | chr8_3:15588578-15588597 | Msa1278970:intron | 45.0% | |
| ACTGTTGATGTGAGTGGGAA+GGG | - | chr8_3:15588579-15588598 | Msa1278970:intron | 45.0% | |
| TGAAACATGGACACCAGACA+TGG | - | chr8_3:15588755-15588774 | Msa1278970:intron | 45.0% | |
| TGTTAGACATGCTAGTCACG+AGG | - | chr8_3:15588863-15588882 | Msa1278970:intron | 45.0% | |
| GGCTGTAAGTTGTGCATAGT+TGG | - | chr8_3:15588898-15588917 | Msa1278970:intron | 45.0% | |
| !!! | GAAGTTTTAGGATGGCAGTC+GGG | - | chr8_3:15589083-15589102 | Msa1278970:intron | 45.0% |
| !!! | AAGTTTTAGGATGGCAGTCG+GGG | - | chr8_3:15589084-15589103 | Msa1278970:intron | 45.0% |
| !! | GAGTAAACTTTTTGGGCTGG+TGG | - | chr8_3:15589373-15589392 | Msa1278970:CDS | 45.0% |
| ACTTCTTGGCCTGATTACCA+AGG | + | chr8_3:15589715-15589734 | None:intergenic | 45.0% | |
| ! | GTAATCAGGCCAAGAAGTGT+TGG | - | chr8_3:15589717-15589736 | Msa1278970:CDS | 45.0% |
| CATTTCCCTATTTGCGGTAC+AGG | - | chr8_3:15589789-15589808 | Msa1278970:intron | 45.0% | |
| TGGCTTATGTGAACAGCTTC+TGG | - | chr8_3:15589843-15589862 | Msa1278970:intron | 45.0% | |
| GGCTTATGTGAACAGCTTCT+GGG | - | chr8_3:15589844-15589863 | Msa1278970:intron | 45.0% | |
| TGACGCTCCCTATCATACTT+TGG | - | chr8_3:15589926-15589945 | Msa1278970:intron | 45.0% | |
| GACGCTCCCTATCATACTTT+GGG | - | chr8_3:15589927-15589946 | Msa1278970:intron | 45.0% | |
| !! | CAAAGAGGCAGCACTGATAA+AGG | + | chr8_3:15589983-15590002 | None:intergenic | 45.0% |
| AGAATCTGTTATGCTCCCTC+CGG | - | chr8_3:15590078-15590097 | Msa1278970:intron | 45.0% | |
| ! | GAATGTCTTTCTGGGCCTTT+TGG | + | chr8_3:15590975-15590994 | None:intergenic | 45.0% |
| !! | AAGAGCATTCACCAAATGGC+TGG | - | chr8_3:15591061-15591080 | Msa1278970:CDS | 45.0% |
| !! | AATATTAAGTAATTAATTTA+AGG | - | chr8_3:15590257-15590276 | Msa1278970:intron | 5.0% |
| !! | ATATTAAGTAATTAATTTAA+GGG | - | chr8_3:15590258-15590277 | Msa1278970:intron | 5.0% |
| GGGAGGATGGTACATTGAGA+TGG | + | chr8_3:15587980-15587999 | None:intergenic | 50.0% | |
| ! | GTTGTTGGAGGAAGTGTGTG+TGG | + | chr8_3:15588053-15588072 | None:intergenic | 50.0% |
| !! | TGTAGGATTTTGAGGAGGGG+AGG | + | chr8_3:15588083-15588102 | None:intergenic | 50.0% |
| ! | GTTTTTATTGGAGTGGGGGG+AGG | + | chr8_3:15588132-15588151 | None:intergenic | 50.0% |
| TGTACGGAGGAGGGTGATTA+TGG | + | chr8_3:15588154-15588173 | None:intergenic | 50.0% | |
| GCAGACCAAAACCAAGAACG+AGG | - | chr8_3:15588186-15588205 | Msa1278970:CDS | 50.0% | |
| GAACAGGAGGGACTAAAGAG+AGG | + | chr8_3:15588317-15588336 | None:intergenic | 50.0% | |
| ! | CAAGTAATGGAACCAGACGG+CGG | + | chr8_3:15588382-15588401 | None:intergenic | 50.0% |
| ! | CGGCAAGTAATGGAACCAGA+CGG | + | chr8_3:15588385-15588404 | None:intergenic | 50.0% |
| ! | CGTCTGGTTCCATTACTTGC+CGG | - | chr8_3:15588383-15588402 | Msa1278970:intron | 50.0% |
| GCAGGAGCAGTAAGCTGATA+AGG | + | chr8_3:15588441-15588460 | None:intergenic | 50.0% | |
| TCCTGCTCTTGCGTTGCTAT+TGG | - | chr8_3:15588455-15588474 | Msa1278970:intron | 50.0% | |
| ACCAATAGCAACGCAAGAGC+AGG | + | chr8_3:15588459-15588478 | None:intergenic | 50.0% | |
| !!! | GCTATTGGTTTTCAGGACGG+AGG | - | chr8_3:15588470-15588489 | Msa1278970:intron | 50.0% |
| !! | GCAGCACTGATAAAGGTAGC+AGG | + | chr8_3:15589976-15589995 | None:intergenic | 50.0% |
| TTCTGATGGTTGAGTCCGGA+GGG | + | chr8_3:15590096-15590115 | None:intergenic | 50.0% | |
| TTTCTGATGGTTGAGTCCGG+AGG | + | chr8_3:15590097-15590116 | None:intergenic | 50.0% | |
| GCTACACTTGCACCAGATTG+AGG | - | chr8_3:15591224-15591243 | Msa1278970:exon | 50.0% | |
| !! | AGTTGGTTGGTGTGGTGGGT+GGG | + | chr8_3:15587898-15587917 | None:intergenic | 55.0% |
| ! | AAGAGGAGAGGGGAGTTGGT+TGG | + | chr8_3:15587911-15587930 | None:intergenic | 55.0% |
| GATGAAGAGGAGAGGGGAGT+TGG | + | chr8_3:15587915-15587934 | None:intergenic | 55.0% | |
| !! | GGAGGAGGGTTAGTTGTTGG+AGG | + | chr8_3:15588065-15588084 | None:intergenic | 55.0% |
| !! | AGGGGAGGAGGGTTAGTTGT+TGG | + | chr8_3:15588068-15588087 | None:intergenic | 55.0% |
| !! | GGATTTTGAGGAGGGGAGGA+GGG | + | chr8_3:15588079-15588098 | None:intergenic | 55.0% |
| !! | AGGATTTTGAGGAGGGGAGG+AGG | + | chr8_3:15588080-15588099 | None:intergenic | 55.0% |
| ! | GTCTGGGATTGTACGGAGGA+GGG | + | chr8_3:15588163-15588182 | None:intergenic | 55.0% |
| ! | AGTCTGGGATTGTACGGAGG+AGG | + | chr8_3:15588164-15588183 | None:intergenic | 55.0% |
| TCCTCCGTACAATCCCAGAC+TGG | - | chr8_3:15588163-15588182 | Msa1278970:CDS | 55.0% | |
| CCTCCGTACAATCCCAGACT+GGG | - | chr8_3:15588164-15588183 | Msa1278970:CDS | 55.0% | |
| ! | CTGCCCAGTCTGGGATTGTA+CGG | + | chr8_3:15588170-15588189 | None:intergenic | 55.0% |
| !! | GGTTTTGGTCTGCCCAGTCT+GGG | + | chr8_3:15588179-15588198 | None:intergenic | 55.0% |
| !!! | TGGTTTTGGTCTGCCCAGTC+TGG | + | chr8_3:15588180-15588199 | None:intergenic | 55.0% |
| GGTGTGTGACCCAGTTTGTG+TGG | + | chr8_3:15588239-15588258 | None:intergenic | 55.0% | |
| ! | AAAGTGACGCACGTGACGGA+GGG | + | chr8_3:15588268-15588287 | None:intergenic | 55.0% |
| AAAAGTGACGCACGTGACGG+AGG | + | chr8_3:15588269-15588288 | None:intergenic | 55.0% | |
| GTTGTAAGCGGCGATGACAG+CGG | + | chr8_3:15588358-15588377 | None:intergenic | 55.0% | |
| AGCGAAGAAGCTCGTAGCAC+AGG | + | chr8_3:15588417-15588436 | None:intergenic | 55.0% | |
| !! | CTATGTGTCGGTGCCATGTC+TGG | + | chr8_3:15588771-15588790 | None:intergenic | 55.0% |
| GCAGTCGGGGTTGAACTAGT+CGG | - | chr8_3:15589097-15589116 | Msa1278970:intron | 55.0% | |
| CAGTCGGGGTTGAACTAGTC+GGG | - | chr8_3:15589098-15589117 | Msa1278970:intron | 55.0% | |
| AGTCGGGGTTGAACTAGTCG+GGG | - | chr8_3:15589099-15589118 | Msa1278970:intron | 55.0% | |
| ! | GGGCTGGTGGTTGTAGTTGA+TGG | - | chr8_3:15589386-15589405 | Msa1278970:intron | 55.0% |
| TAGGAGCTAGGCCAGCCATT+TGG | + | chr8_3:15591075-15591094 | None:intergenic | 55.0% | |
| !! | TGGCTGGCCTAGCTCCTAAA+TGG | - | chr8_3:15591077-15591096 | Msa1278970:CDS | 55.0% |
| ! | GAGTTGGTTGGTGTGGTGGG+TGG | + | chr8_3:15587899-15587918 | None:intergenic | 60.0% |
| ! | GGGGAGTTGGTTGGTGTGGT+GGG | + | chr8_3:15587902-15587921 | None:intergenic | 60.0% |
| ! | AGGGGAGTTGGTTGGTGTGG+TGG | + | chr8_3:15587903-15587922 | None:intergenic | 60.0% |
| ! | GAGAGGGGAGTTGGTTGGTG+TGG | + | chr8_3:15587906-15587925 | None:intergenic | 60.0% |
| TATTGGAGTGGGGGGAGGTG+TGG | + | chr8_3:15588127-15588146 | None:intergenic | 60.0% | |
| ! | CCCAGTCTGGGATTGTACGG+AGG | + | chr8_3:15588167-15588186 | None:intergenic | 60.0% |
| CCAGACGGCGGAGTTGTAAG+CGG | + | chr8_3:15588370-15588389 | None:intergenic | 60.0% | |
| ! | GCACGTGACGGAGGGAGGAA+CGG | + | chr8_3:15588260-15588279 | None:intergenic | 65.0% |
| CCGCTTACAACTCCGCCGTC+TGG | - | chr8_3:15588367-15588386 | Msa1278970:intron | 65.0% | |
| ! | GTGACGCACGTGACGGAGGG+AGG | + | chr8_3:15588265-15588284 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 15587849 | 15591366 | 15587849 | ID=Msa1278970;Name=Msa1278970 |
| chr8_3 | mRNA | 15587849 | 15591366 | 15587849 | ID=Msa1278970-mRNA-1;Parent=Msa1278970;Name=Msa1278970-mRNA-1;_AED=0.02;_eAED=0.02;_QI=136|1|1|1|1|1|4|271|409 |
| chr8_3 | exon | 15587849 | 15588296 | 15587849 | ID=Msa1278970-mRNA-1:exon:6060;Parent=Msa1278970-mRNA-1 |
| chr8_3 | exon | 15589198 | 15589404 | 15589198 | ID=Msa1278970-mRNA-1:exon:6059;Parent=Msa1278970-mRNA-1 |
| chr8_3 | exon | 15589606 | 15589773 | 15589606 | ID=Msa1278970-mRNA-1:exon:6058;Parent=Msa1278970-mRNA-1 |
| chr8_3 | exon | 15590553 | 15591366 | 15590553 | ID=Msa1278970-mRNA-1:exon:6057;Parent=Msa1278970-mRNA-1 |
| chr8_3 | five_prime_UTR | 15591231 | 15591366 | 15591231 | ID=Msa1278970-mRNA-1:five_prime_utr;Parent=Msa1278970-mRNA-1 |
| chr8_3 | CDS | 15590553 | 15591230 | 15590553 | ID=Msa1278970-mRNA-1:cds;Parent=Msa1278970-mRNA-1 |
| chr8_3 | CDS | 15589606 | 15589773 | 15589606 | ID=Msa1278970-mRNA-1:cds;Parent=Msa1278970-mRNA-1 |
| chr8_3 | CDS | 15589198 | 15589404 | 15589198 | ID=Msa1278970-mRNA-1:cds;Parent=Msa1278970-mRNA-1 |
| chr8_3 | CDS | 15588120 | 15588296 | 15588120 | ID=Msa1278970-mRNA-1:cds;Parent=Msa1278970-mRNA-1 |
| chr8_3 | three_prime_UTR | 15587849 | 15588119 | 15587849 | ID=Msa1278970-mRNA-1:three_prime_utr;Parent=Msa1278970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
