Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1356600 | XP_003601651.2 | 98.069 | 466 | 9 | 0 | 1 | 466 | 1 | 466 | 0.0 | 946 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1356600 | sp|Q93WX6|CNIF1_ARATH | 77.468 | 466 | 102 | 1 | 1 | 466 | 1 | 463 | 0.0 | 732 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1356600 | G7JA74 | 98.069 | 466 | 9 | 0 | 1 | 466 | 1 | 466 | 0.0 | 946 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000050 | Msa1356600 | -0.852530 | 4.346366e-61 | -8.615850e-47 |
Msa0001550 | Msa1356600 | 0.819583 | 1.076346e-52 | -8.615850e-47 |
Msa0002110 | Msa1356600 | 0.812609 | 3.889515e-51 | -8.615850e-47 |
Msa0002580 | Msa1356600 | -0.801439 | 8.998501e-49 | -8.615850e-47 |
Msa0005380 | Msa1356600 | -0.815040 | 1.133333e-51 | -8.615850e-47 |
Msa0011450 | Msa1356600 | 0.816121 | 6.512012e-52 | -8.615850e-47 |
Msa0017670 | Msa1356600 | -0.806890 | 6.604321e-50 | -8.615850e-47 |
Msa0017930 | Msa1356600 | -0.823100 | 1.661102e-53 | -8.615850e-47 |
Msa0027280 | Msa1356600 | -0.812286 | 4.575738e-51 | -8.615850e-47 |
Msa0029520 | Msa1356600 | 0.807112 | 5.927121e-50 | -8.615850e-47 |
Msa0030160 | Msa1356600 | -0.812807 | 3.520404e-51 | -8.615850e-47 |
Msa0030700 | Msa1356600 | -0.829519 | 4.920444e-55 | -8.615850e-47 |
Msa0033840 | Msa1356600 | 0.807051 | 6.104359e-50 | -8.615850e-47 |
Msa0038290 | Msa1356600 | 0.809908 | 1.499761e-50 | -8.615850e-47 |
Msa0042640 | Msa1356600 | -0.817451 | 3.275031e-52 | -8.615850e-47 |
Msa0046110 | Msa1356600 | 0.801431 | 9.031606e-49 | -8.615850e-47 |
Msa0048510 | Msa1356600 | -0.829261 | 5.682328e-55 | -8.615850e-47 |
Msa0057770 | Msa1356600 | 0.812364 | 4.401202e-51 | -8.615850e-47 |
Msa0065670 | Msa1356600 | 0.800562 | 1.359441e-48 | -8.615850e-47 |
Msa0077340 | Msa1356600 | -0.844733 | 6.296578e-59 | -8.615850e-47 |
Msa0077560 | Msa1356600 | -0.817172 | 3.784733e-52 | -8.615850e-47 |
Msa0078120 | Msa1356600 | -0.828585 | 8.282646e-55 | -8.615850e-47 |
Msa0081390 | Msa1356600 | -0.815416 | 9.347028e-52 | -8.615850e-47 |
Msa0081450 | Msa1356600 | -0.802942 | 4.414981e-49 | -8.615850e-47 |
Msa0093950 | Msa1356600 | 0.837330 | 5.540327e-57 | -8.615850e-47 |
Msa0094170 | Msa1356600 | 0.817605 | 3.023189e-52 | -8.615850e-47 |
Msa0095810 | Msa1356600 | 0.816342 | 5.809782e-52 | -8.615850e-47 |
Msa0098040 | Msa1356600 | -0.831709 | 1.430983e-55 | -8.615850e-47 |
Msa0099700 | Msa1356600 | -0.823914 | 1.071771e-53 | -8.615850e-47 |
Msa0102240 | Msa1356600 | -0.823677 | 1.217817e-53 | -8.615850e-47 |
Msa0105650 | Msa1356600 | -0.817556 | 3.101498e-52 | -8.615850e-47 |
Msa0111110 | Msa1356600 | 0.821031 | 5.010962e-53 | -8.615850e-47 |
Msa1346560 | Msa1356600 | -0.803248 | 3.815955e-49 | -8.615850e-47 |
Msa1348170 | Msa1356600 | 0.924666 | 5.195136e-90 | -8.615850e-47 |
Msa1356600 | Msa1363820 | 0.842864 | 1.992996e-58 | -8.615850e-47 |
Msa1356600 | Msa1364350 | 0.811530 | 6.686613e-51 | -8.615850e-47 |
Msa1356600 | Msa1372040 | -0.818046 | 2.404001e-52 | -8.615850e-47 |
Msa1356600 | Msa1375610 | 0.831948 | 1.249519e-55 | -8.615850e-47 |
Msa1356600 | Msa1376550 | 0.815395 | 9.449948e-52 | -8.615850e-47 |
Msa1356600 | Msa1382300 | -0.812942 | 3.289143e-51 | -8.615850e-47 |
Msa1356600 | Msa1389900 | -0.841592 | 4.327493e-58 | -8.615850e-47 |
Msa1356600 | Msa1390290 | -0.817628 | 2.988177e-52 | -8.615850e-47 |
Msa1356600 | Msa1395430 | 0.823721 | 1.188980e-53 | -8.615850e-47 |
Msa1356600 | Msa1405460 | -0.841783 | 3.854436e-58 | -8.615850e-47 |
Msa1356600 | Msa1407750 | -0.811509 | 6.755928e-51 | -8.615850e-47 |
Msa1356600 | Msa1414640 | -0.806242 | 9.048239e-50 | -8.615850e-47 |
Msa1356600 | Msa1415540 | -0.805443 | 1.331745e-49 | -8.615850e-47 |
Msa1356600 | Msa1417370 | -0.808568 | 2.904930e-50 | -8.615850e-47 |
Msa1356600 | Msa1417380 | -0.842294 | 2.822642e-58 | -8.615850e-47 |
Msa1356600 | Msa1427100 | -0.808342 | 3.246936e-50 | -8.615850e-47 |
Msa1356600 | Msa1434220 | -0.835538 | 1.583464e-56 | -8.615850e-47 |
Msa1356600 | Msa1445910 | 0.827216 | 1.767976e-54 | -8.615850e-47 |
Msa1356600 | Msa1452710 | -0.806639 | 7.459236e-50 | -8.615850e-47 |
Msa1356600 | Msa1464090 | -0.813873 | 2.052859e-51 | -8.615850e-47 |
Msa0611210 | Msa1356600 | -0.821326 | 4.285259e-53 | -8.615850e-47 |
Msa0611540 | Msa1356600 | 0.812118 | 4.979298e-51 | -8.615850e-47 |
Msa0624420 | Msa1356600 | -0.817260 | 3.616997e-52 | -8.615850e-47 |
Msa0640110 | Msa1356600 | -0.813895 | 2.030116e-51 | -8.615850e-47 |
Msa0646410 | Msa1356600 | 0.812857 | 3.432328e-51 | -8.615850e-47 |
Msa0651550 | Msa1356600 | -0.806756 | 7.048138e-50 | -8.615850e-47 |
Msa0654410 | Msa1356600 | 0.811600 | 6.454704e-51 | -8.615850e-47 |
Msa0654490 | Msa1356600 | 0.823973 | 1.037848e-53 | -8.615850e-47 |
Msa0657720 | Msa1356600 | -0.808738 | 2.671659e-50 | -8.615850e-47 |
Msa0665000 | Msa1356600 | -0.802879 | 4.550526e-49 | -8.615850e-47 |
Msa0674480 | Msa1356600 | -0.888237 | 7.054192e-73 | -8.615850e-47 |
Msa0674560 | Msa1356600 | -0.815720 | 7.999875e-52 | -8.615850e-47 |
Msa0678380 | Msa1356600 | -0.839375 | 1.645731e-57 | -8.615850e-47 |
Msa0693340 | Msa1356600 | 0.844771 | 6.151111e-59 | -8.615850e-47 |
Msa0702720 | Msa1356600 | -0.805667 | 1.195058e-49 | -8.615850e-47 |
Msa0702790 | Msa1356600 | -0.803062 | 4.169620e-49 | -8.615850e-47 |
Msa0720410 | Msa1356600 | -0.811839 | 5.728417e-51 | -8.615850e-47 |
Msa0723090 | Msa1356600 | -0.819066 | 1.411657e-52 | -8.615850e-47 |
Msa0733010 | Msa1356600 | -0.818390 | 2.009752e-52 | -8.615850e-47 |
Msa0734250 | Msa1356600 | -0.865615 | 5.193574e-65 | -8.615850e-47 |
Msa0741220 | Msa1356600 | -0.808297 | 3.319362e-50 | -8.615850e-47 |
Msa0741650 | Msa1356600 | -0.807427 | 5.081938e-50 | -8.615850e-47 |
Msa0769300 | Msa1356600 | -0.817161 | 3.805709e-52 | -8.615850e-47 |
Msa0769690 | Msa1356600 | -0.804563 | 2.034813e-49 | -8.615850e-47 |
Msa0780570 | Msa1356600 | -0.802136 | 6.472117e-49 | -8.615850e-47 |
Msa0792370 | Msa1356600 | -0.817001 | 4.135562e-52 | -8.615850e-47 |
Msa0795750 | Msa1356600 | -0.846336 | 2.315348e-59 | -8.615850e-47 |
Msa0795870 | Msa1356600 | -0.804445 | 2.152413e-49 | -8.615850e-47 |
Msa0813160 | Msa1356600 | -0.806456 | 8.155611e-50 | -8.615850e-47 |
Msa0815970 | Msa1356600 | -0.811520 | 6.720286e-51 | -8.615850e-47 |
Msa0822320 | Msa1356600 | 0.807325 | 5.340314e-50 | -8.615850e-47 |
Msa0823480 | Msa1356600 | 0.802686 | 4.987117e-49 | -8.615850e-47 |
Msa0826950 | Msa1356600 | -0.807250 | 5.541016e-50 | -8.615850e-47 |
Msa0828950 | Msa1356600 | -0.809696 | 1.665324e-50 | -8.615850e-47 |
Msa0828960 | Msa1356600 | -0.801114 | 1.048944e-48 | -8.615850e-47 |
Msa0829300 | Msa1356600 | -0.824845 | 6.473289e-54 | -8.615850e-47 |
Msa0829330 | Msa1356600 | -0.812566 | 3.974294e-51 | -8.615850e-47 |
Msa0833530 | Msa1356600 | -0.850573 | 1.556078e-60 | -8.615850e-47 |
Msa0833650 | Msa1356600 | -0.809254 | 2.071813e-50 | -8.615850e-47 |
Msa0833950 | Msa1356600 | 0.804865 | 1.759620e-49 | -8.615850e-47 |
Msa0125360 | Msa1356600 | -0.818322 | 2.082137e-52 | -8.615850e-47 |
Msa0126000 | Msa1356600 | 0.809860 | 1.535751e-50 | -8.615850e-47 |
Msa0133140 | Msa1356600 | 0.811107 | 8.261332e-51 | -8.615850e-47 |
Msa0140770 | Msa1356600 | 0.822438 | 2.368825e-53 | -8.615850e-47 |
Msa0151510 | Msa1356600 | 0.805560 | 1.258508e-49 | -8.615850e-47 |
Msa0152220 | Msa1356600 | -0.831260 | 1.846768e-55 | -8.615850e-47 |
Msa0154890 | Msa1356600 | 0.801070 | 1.070881e-48 | -8.615850e-47 |
Msa0168410 | Msa1356600 | 0.840054 | 1.095392e-57 | -8.615850e-47 |
Msa0173690 | Msa1356600 | -0.826521 | 2.592175e-54 | -8.615850e-47 |
Msa0175750 | Msa1356600 | -0.803050 | 4.194549e-49 | -8.615850e-47 |
Msa0187590 | Msa1356600 | 0.806102 | 9.684028e-50 | -8.615850e-47 |
Msa0189560 | Msa1356600 | 0.828205 | 1.023181e-54 | -8.615850e-47 |
Msa0199940 | Msa1356600 | -0.810490 | 1.123505e-50 | -8.615850e-47 |
Msa0220400 | Msa1356600 | 0.853611 | 2.131526e-61 | -8.615850e-47 |
Msa0225100 | Msa1356600 | -0.803991 | 2.676275e-49 | -8.615850e-47 |
Msa0225190 | Msa1356600 | 0.808826 | 2.559230e-50 | -8.615850e-47 |
Msa0225790 | Msa1356600 | 0.817871 | 2.633327e-52 | -8.615850e-47 |
Msa0230840 | Msa1356600 | -0.810995 | 8.734370e-51 | -8.615850e-47 |
Msa0234090 | Msa1356600 | -0.812221 | 4.728913e-51 | -8.615850e-47 |
Msa0235290 | Msa1356600 | -0.821561 | 3.781023e-53 | -8.615850e-47 |
Msa1225860 | Msa1356600 | 0.874660 | 5.676663e-68 | -8.615850e-47 |
Msa1265650 | Msa1356600 | -0.801173 | 1.020227e-48 | -8.615850e-47 |
Msa1278970 | Msa1356600 | 0.809258 | 2.068338e-50 | -8.615850e-47 |
Msa1308400 | Msa1356600 | -0.807833 | 4.167819e-50 | -8.615850e-47 |
Msa1321060 | Msa1356600 | -0.803645 | 3.158588e-49 | -8.615850e-47 |
Msa1325410 | Msa1356600 | 0.844641 | 6.666610e-59 | -8.615850e-47 |
Msa1340200 | Msa1356600 | -0.815825 | 7.578459e-52 | -8.615850e-47 |
Msa1341840 | Msa1356600 | -0.832642 | 8.413179e-56 | -8.615850e-47 |
Msa0365210 | Msa1356600 | -0.850006 | 2.243893e-60 | -8.615850e-47 |
Msa0369790 | Msa1356600 | -0.805686 | 1.184049e-49 | -8.615850e-47 |
Msa0372300 | Msa1356600 | -0.806827 | 6.809775e-50 | -8.615850e-47 |
Msa0375330 | Msa1356600 | 0.932180 | 1.254272e-94 | -8.615850e-47 |
Msa0380400 | Msa1356600 | 0.807396 | 5.158623e-50 | -8.615850e-47 |
Msa0385930 | Msa1356600 | 0.825278 | 5.114344e-54 | -8.615850e-47 |
Msa0402070 | Msa1356600 | 0.827355 | 1.637887e-54 | -8.615850e-47 |
Msa0412790 | Msa1356600 | -0.817745 | 2.811639e-52 | -8.615850e-47 |
Msa0457560 | Msa1356600 | -0.840811 | 6.943669e-58 | -8.615850e-47 |
Msa0457570 | Msa1356600 | -0.833313 | 5.729295e-56 | -8.615850e-47 |
Msa0464000 | Msa1356600 | -0.804899 | 1.730851e-49 | -8.615850e-47 |
Msa0476170 | Msa1356600 | 0.828206 | 1.022466e-54 | -8.615850e-47 |
Msa0479760 | Msa1356600 | 0.819205 | 1.312437e-52 | -8.615850e-47 |
Msa1044250 | Msa1356600 | -0.810602 | 1.062308e-50 | -8.615850e-47 |
Msa1044680 | Msa1356600 | -0.803881 | 2.820334e-49 | -8.615850e-47 |
Msa1065470 | Msa1356600 | -0.801571 | 8.454987e-49 | -8.615850e-47 |
Msa1071180 | Msa1356600 | 0.822449 | 2.354505e-53 | -8.615850e-47 |
Msa1072940 | Msa1356600 | -0.826976 | 2.018459e-54 | -8.615850e-47 |
Msa1074890 | Msa1356600 | -0.810558 | 1.086135e-50 | -8.615850e-47 |
Msa1089450 | Msa1356600 | -0.807535 | 4.821064e-50 | -8.615850e-47 |
Msa1092310 | Msa1356600 | -0.808555 | 2.924030e-50 | -8.615850e-47 |
Msa1106590 | Msa1356600 | -0.813994 | 1.931217e-51 | -8.615850e-47 |
Msa0240900 | Msa1356600 | -0.837015 | 6.669005e-57 | -8.615850e-47 |
Msa0244640 | Msa1356600 | -0.849998 | 2.255731e-60 | -8.615850e-47 |
Msa0244890 | Msa1356600 | -0.804533 | 2.064296e-49 | -8.615850e-47 |
Msa0260580 | Msa1356600 | 0.824656 | 7.172319e-54 | -8.615850e-47 |
Msa0260640 | Msa1356600 | 0.808886 | 2.484224e-50 | -8.615850e-47 |
Msa0263230 | Msa1356600 | -0.826701 | 2.348125e-54 | -8.615850e-47 |
Msa0266180 | Msa1356600 | -0.810868 | 9.303838e-51 | -8.615850e-47 |
Msa0267790 | Msa1356600 | -0.810883 | 9.237810e-51 | -8.615850e-47 |
Msa0271540 | Msa1356600 | -0.808789 | 2.606048e-50 | -8.615850e-47 |
Msa0281470 | Msa1356600 | -0.808394 | 3.165085e-50 | -8.615850e-47 |
Msa0283330 | Msa1356600 | -0.837381 | 5.375188e-57 | -8.615850e-47 |
Msa0287740 | Msa1356600 | -0.810685 | 1.019131e-50 | -8.615850e-47 |
Msa0290720 | Msa1356600 | -0.802326 | 5.916970e-49 | -8.615850e-47 |
Msa0299530 | Msa1356600 | 0.845093 | 5.034366e-59 | -8.615850e-47 |
Msa0300840 | Msa1356600 | -0.850558 | 1.571371e-60 | -8.615850e-47 |
Msa0307270 | Msa1356600 | -0.818282 | 2.126465e-52 | -8.615850e-47 |
Msa0307670 | Msa1356600 | -0.825149 | 5.487886e-54 | -8.615850e-47 |
Msa0313900 | Msa1356600 | -0.826245 | 3.016275e-54 | -8.615850e-47 |
Msa0317970 | Msa1356600 | -0.807176 | 5.744375e-50 | -8.615850e-47 |
Msa0319920 | Msa1356600 | -0.826789 | 2.236577e-54 | -8.615850e-47 |
Msa0320500 | Msa1356600 | -0.805292 | 1.432427e-49 | -8.615850e-47 |
Msa0321620 | Msa1356600 | -0.824107 | 9.657511e-54 | -8.615850e-47 |
Msa0338340 | Msa1356600 | -0.858230 | 9.498050e-63 | -8.615850e-47 |
Msa0349210 | Msa1356600 | -0.814127 | 1.804535e-51 | -8.615850e-47 |
Msa0361910 | Msa1356600 | -0.809857 | 1.537577e-50 | -8.615850e-47 |
Msa1128520 | Msa1356600 | 0.801554 | 8.525660e-49 | -8.615850e-47 |
Msa1129200 | Msa1356600 | 0.821401 | 4.116753e-53 | -8.615850e-47 |
Msa1129300 | Msa1356600 | 0.802288 | 6.023916e-49 | -8.615850e-47 |
Msa1130060 | Msa1356600 | -0.825023 | 5.874464e-54 | -8.615850e-47 |
Msa1132840 | Msa1356600 | -0.814139 | 1.794075e-51 | -8.615850e-47 |
Msa1143370 | Msa1356600 | 0.820981 | 5.146599e-53 | -8.615850e-47 |
Msa1150960 | Msa1356600 | -0.827199 | 1.784954e-54 | -8.615850e-47 |
Msa1155170 | Msa1356600 | 0.876474 | 1.357225e-68 | -8.615850e-47 |
Msa1160920 | Msa1356600 | -0.807040 | 6.136481e-50 | -8.615850e-47 |
Msa1175990 | Msa1356600 | -0.808417 | 3.128953e-50 | -8.615850e-47 |
Msa1184120 | Msa1356600 | -0.825271 | 5.134247e-54 | -8.615850e-47 |
Msa1190100 | Msa1356600 | 0.802284 | 6.034715e-49 | -8.615850e-47 |
Msa1190180 | Msa1356600 | -0.808599 | 2.861865e-50 | -8.615850e-47 |
Msa0513970 | Msa1356600 | -0.837793 | 4.214471e-57 | -8.615850e-47 |
Msa0519750 | Msa1356600 | -0.813803 | 2.127899e-51 | -8.615850e-47 |
Msa0519820 | Msa1356600 | -0.807940 | 3.954303e-50 | -8.615850e-47 |
Msa0519830 | Msa1356600 | -0.809403 | 1.924724e-50 | -8.615850e-47 |
Msa0523430 | Msa1356600 | 0.833929 | 4.020115e-56 | -8.615850e-47 |
Msa0523490 | Msa1356600 | 0.877127 | 8.058780e-69 | -8.615850e-47 |
Msa0526730 | Msa1356600 | -0.817646 | 2.960245e-52 | -8.615850e-47 |
Msa0528570 | Msa1356600 | -0.806898 | 6.578752e-50 | -8.615850e-47 |
Msa0529030 | Msa1356600 | -0.841726 | 3.989052e-58 | -8.615850e-47 |
Msa0534720 | Msa1356600 | -0.804288 | 2.321399e-49 | -8.615850e-47 |
Msa0543560 | Msa1356600 | -0.840803 | 6.975978e-58 | -8.615850e-47 |
Msa0556230 | Msa1356600 | 0.818474 | 1.923186e-52 | -8.615850e-47 |
Msa0559650 | Msa1356600 | 0.850486 | 1.646062e-60 | -8.615850e-47 |
Msa0580370 | Msa1356600 | -0.813730 | 2.207577e-51 | -8.615850e-47 |
Msa0583360 | Msa1356600 | 0.875692 | 2.522565e-68 | -8.615850e-47 |
Msa0594050 | Msa1356600 | -0.818685 | 1.723130e-52 | -8.615850e-47 |
Msa0599420 | Msa1356600 | -0.836775 | 7.680093e-57 | -8.615850e-47 |
Msa0862480 | Msa1356600 | 0.809588 | 1.757141e-50 | -8.615850e-47 |
Msa0870460 | Msa1356600 | 0.842627 | 2.303715e-58 | -8.615850e-47 |
Msa0876940 | Msa1356600 | -0.801589 | 8.383834e-49 | -8.615850e-47 |
Msa0879930 | Msa1356600 | -0.818765 | 1.652038e-52 | -8.615850e-47 |
Msa0960880 | Msa1356600 | 0.805438 | 1.334988e-49 | -8.615850e-47 |
Msa0967170 | Msa1356600 | -0.831953 | 1.245955e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1356600 | MtrunA17_Chr3g0121581 | 98.069 | 466 | 9 | 0 | 1 | 466 | 1 | 466 | 0.0 | 946 |
Msa1356600 | MtrunA17_Chr5g0400751 | 25.258 | 388 | 257 | 9 | 77 | 453 | 56 | 421 | 9.91e-25 | 106 |
Msa1356600 | MtrunA17_Chr7g0271361 | 24.603 | 252 | 161 | 9 | 74 | 307 | 48 | 288 | 1.87e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1356600 | AT1G08490.1 | 77.468 | 466 | 102 | 1 | 1 | 466 | 1 | 463 | 0.0 | 732 |
Msa1356600 | AT5G65720.3 | 24.444 | 450 | 283 | 11 | 20 | 453 | 12 | 420 | 1.32e-21 | 97.4 |
Msa1356600 | AT5G65720.1 | 24.444 | 450 | 283 | 11 | 20 | 453 | 12 | 420 | 1.32e-21 | 97.4 |
Msa1356600 | AT5G65720.2 | 23.920 | 301 | 188 | 8 | 169 | 453 | 17 | 292 | 3.76e-13 | 70.9 |
Find 153 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACTGATCTTGCAACATTTC+TGG | 0.138943 | tig0015809:+55930 | Msa1356600:CDS |
TGGCTATTTATTTATTATTA+TGG | 0.153869 | tig0015809:-51166 | None:intergenic |
GGCCCATAGATGCGAATATT+TGG | 0.178379 | tig0015809:-55844 | None:intergenic |
CAACCCCTCCATCGGTATTT+AGG | 0.187810 | tig0015809:+56407 | Msa1356600:CDS |
AACTCTTAGTTCTCCCTCTT+TGG | 0.194746 | tig0015809:+51863 | Msa1356600:CDS |
TCCTTCAATTTGTCTATATC+TGG | 0.214976 | tig0015809:-52748 | None:intergenic |
AATGATTTCAGATGTATATT+TGG | 0.234059 | tig0015809:+53844 | Msa1356600:CDS |
TGGATTCTTATATGGTAAAA+TGG | 0.237622 | tig0015809:+53611 | Msa1356600:CDS |
GTCCCAAATATTCGCATCTA+TGG | 0.258743 | tig0015809:+55841 | Msa1356600:CDS |
GACATGTTATTCCACAATTA+AGG | 0.283706 | tig0015809:-56673 | None:intergenic |
ACAGGCATTGGATTCTTATA+TGG | 0.290323 | tig0015809:+53603 | Msa1356600:CDS |
TCAATCTAGTAGCTTATTCT+TGG | 0.296895 | tig0015809:+52252 | Msa1356600:CDS |
AATTTATACTCGCAATAGTA+TGG | 0.307512 | tig0015809:+56782 | Msa1356600:three_prime_UTR |
ACTCTTAGTTCTCCCTCTTT+GGG | 0.324312 | tig0015809:+51864 | Msa1356600:CDS |
TTACTTCCTGGTGAAGTATA+GGG | 0.324627 | tig0015809:-51908 | None:intergenic |
AACCCCTCCATCGGTATTTA+GGG | 0.335796 | tig0015809:+56408 | Msa1356600:CDS |
AGTGATTGAACAGCAATAAC+TGG | 0.340667 | tig0015809:-51748 | None:intergenic |
TTAGGATTGGTTCAATTGAT+AGG | 0.340879 | tig0015809:+56586 | Msa1356600:three_prime_UTR |
GCAGCAATTGATTACTTGTC+TGG | 0.346961 | tig0015809:+54430 | Msa1356600:CDS |
ATACTTCACCAGGAAGTAAA+TGG | 0.354665 | tig0015809:+51912 | Msa1356600:CDS |
TCCATCGCCATTGGTTGGGT+TGG | 0.374008 | tig0015809:+51239 | Msa1356600:five_prime_UTR |
TTTACTTCCTGGTGAAGTAT+AGG | 0.375419 | tig0015809:-51909 | None:intergenic |
ATTGGTGAAGCAATTGGATT+AGG | 0.377119 | tig0015809:+54406 | Msa1356600:CDS |
ATTGATTACTTGTCTGGGAT+TGG | 0.379311 | tig0015809:+54436 | Msa1356600:CDS |
CCATCGCCATTGGTTGGGTT+GGG | 0.379491 | tig0015809:+51240 | Msa1356600:five_prime_UTR |
ATGAGATCAGCAAGAGGAAT+TGG | 0.385117 | tig0015809:-56623 | None:intergenic |
CCAGCTATTGGTGAAGCAAT+TGG | 0.385593 | tig0015809:+54400 | Msa1356600:CDS |
CCTGGTGAAGTATAGGGAAA+TGG | 0.386768 | tig0015809:-51902 | None:intergenic |
TAACTGGGGCTTGGAAGTTT+CGG | 0.386871 | tig0015809:-51732 | None:intergenic |
TCTGACACGTGATGTGGTTC+TGG | 0.390059 | tig0015809:-51772 | None:intergenic |
CAGTGTGCAATATCTCTAAT+AGG | 0.390967 | tig0015809:-53375 | None:intergenic |
GCAAGTATGCAACTGTTAAC+TGG | 0.400568 | tig0015809:-51270 | None:intergenic |
GCCCATAGATGCGAATATTT+GGG | 0.403525 | tig0015809:-55843 | None:intergenic |
CTGGTGAAGTATAGGGAAAT+GGG | 0.406014 | tig0015809:-51901 | None:intergenic |
CTATATCTGGAATTTCATCT+TGG | 0.406188 | tig0015809:-52735 | None:intergenic |
ATAGGAGAATTCCAAAATCT+TGG | 0.408694 | tig0015809:-51681 | None:intergenic |
TTACAATTCAAACGTGCATC+GGG | 0.418015 | tig0015809:+52019 | Msa1356600:CDS |
CAATCTAGTAGCTTATTCTT+GGG | 0.419995 | tig0015809:+52253 | Msa1356600:CDS |
GGTTTCCATCGCCATTGGTT+GGG | 0.422201 | tig0015809:+51235 | Msa1356600:five_prime_UTR |
GAGGCTGGAACACCAGCTAT+TGG | 0.422236 | tig0015809:+54388 | Msa1356600:CDS |
TTGATTACTTGTCTGGGATT+GGG | 0.425333 | tig0015809:+54437 | Msa1356600:CDS |
TTGACGGTTGATGCACGAAC+AGG | 0.429519 | tig0015809:-51822 | None:intergenic |
TTGACTTCTTTCGAAGGGGC+TGG | 0.434464 | tig0015809:-55865 | None:intergenic |
CACAAACCTGGACGGAGGTT+CGG | 0.435387 | tig0015809:-53882 | None:intergenic |
TGCAACATTTCTGGACCAAC+AGG | 0.438009 | tig0015809:+55939 | Msa1356600:CDS |
AATGCCTTCACAACAGCTGC+AGG | 0.442651 | tig0015809:-51978 | None:intergenic |
CTCGTTTGACTTCTTTCGAA+GGG | 0.444579 | tig0015809:-55870 | None:intergenic |
TTACAGATGTGTGGGCCTAC+AGG | 0.456863 | tig0015809:+53585 | Msa1356600:intron |
TTCAGCTACTGCTTGATTGA+CGG | 0.459909 | tig0015809:-51838 | None:intergenic |
CCTTAGTGTTGTAGAAATAG+AGG | 0.461757 | tig0015809:-56454 | None:intergenic |
AAGTATAGGGAAATGGGGTC+TGG | 0.471495 | tig0015809:-51895 | None:intergenic |
CAAATGGTTTCCATCGCCAT+TGG | 0.471565 | tig0015809:+51230 | Msa1356600:five_prime_UTR |
TAAATACCGATGGAGGGGTT+GGG | 0.473325 | tig0015809:-56405 | None:intergenic |
CATGGAGTGGCAATCAGATC+AGG | 0.475274 | tig0015809:+56371 | Msa1356600:CDS |
TTAAGGCCTACTGTAATTAG+TGG | 0.475990 | tig0015809:-56656 | None:intergenic |
TCCAGATATAGACAAATTGA+AGG | 0.478567 | tig0015809:+52747 | Msa1356600:CDS |
CTTCAATTCATTCAAGTAGT+CGG | 0.482994 | tig0015809:+56523 | Msa1356600:exon |
GACTGTACATCAGTTAGGAT+TGG | 0.484410 | tig0015809:+56573 | Msa1356600:three_prime_UTR |
AAAATGGAGGCATGGAAGAC+AGG | 0.487304 | tig0015809:-53638 | None:intergenic |
GTGGAGAACAGCGGCGGCGA+GGG | 0.491164 | tig0015809:-51367 | None:intergenic |
TCCATTGCTAACCACCCAAT+AGG | 0.493901 | tig0015809:-51699 | None:intergenic |
GAACAGCAATAACTGGGGCT+TGG | 0.497888 | tig0015809:-51741 | None:intergenic |
ATTTATGTGTTACAAAATGC+CGG | 0.499401 | tig0015809:+56708 | Msa1356600:three_prime_UTR |
TGGTTTCCATCGCCATTGGT+TGG | 0.499995 | tig0015809:+51234 | Msa1356600:five_prime_UTR |
TCCTATTGGGTGGTTAGCAA+TGG | 0.500044 | tig0015809:+51698 | Msa1356600:exon |
CTCTTGCTGATCTCATAGAT+AGG | 0.500389 | tig0015809:+56630 | Msa1356600:three_prime_UTR |
ACTCACCTCATACTCATGTA+TGG | 0.501136 | tig0015809:-54467 | None:intergenic |
AGAAATGTTGCAAGATCAGT+AGG | 0.504435 | tig0015809:-55928 | None:intergenic |
CAGCAATTGATTACTTGTCT+GGG | 0.508847 | tig0015809:+54431 | Msa1356600:CDS |
TACCATACTAGATTTGAGGC+TGG | 0.512947 | tig0015809:+54373 | Msa1356600:intron |
GCAAGCCATACATGAGTATG+AGG | 0.513803 | tig0015809:+54462 | Msa1356600:CDS |
CTGACAGAAGCCTTTCATAC+AGG | 0.515663 | tig0015809:-55819 | None:intergenic |
ATGTGTGGGCCTACAGGCAT+TGG | 0.516246 | tig0015809:+53591 | Msa1356600:CDS |
CATCATGTTTCAAATGTGCT+TGG | 0.517203 | tig0015809:+52805 | Msa1356600:CDS |
CTAAATACCGATGGAGGGGT+TGG | 0.521306 | tig0015809:-56406 | None:intergenic |
CCATTTCCCTATACTTCACC+AGG | 0.523096 | tig0015809:+51902 | Msa1356600:CDS |
GATATTGCACACTGGGCACA+TGG | 0.530497 | tig0015809:+53384 | Msa1356600:CDS |
TCCCAAATATTCGCATCTAT+GGG | 0.531604 | tig0015809:+55842 | Msa1356600:CDS |
CCAATTGCTTCACCAATAGC+TGG | 0.533136 | tig0015809:-54400 | None:intergenic |
ACCACATCACGTGTCAGACT+TGG | 0.534095 | tig0015809:+51777 | Msa1356600:CDS |
GTGATTGAACAGCAATAACT+GGG | 0.535039 | tig0015809:-51747 | None:intergenic |
CACGTGTCGGATCAAGCAAA+TGG | 0.535997 | tig0015809:+51214 | Msa1356600:five_prime_UTR |
GCACACTGGGCACATGGGGT+TGG | 0.536529 | tig0015809:+53390 | Msa1356600:CDS |
TTATGATGATCAGAGCTTAG+TGG | 0.536844 | tig0015809:-51386 | None:intergenic |
GAACAGGGAGATAAGTTAAA+CGG | 0.538325 | tig0015809:-51806 | None:intergenic |
TGAACATCAACCACCATGTG+TGG | 0.542670 | tig0015809:-53447 | None:intergenic |
GTTACAATTCAAACGTGCAT+CGG | 0.544500 | tig0015809:+52018 | Msa1356600:CDS |
CTTATGCCGAACCTCCGTCC+AGG | 0.545005 | tig0015809:+53876 | Msa1356600:CDS |
ATCATAATTCAATTCATACT+AGG | 0.547474 | tig0015809:+51402 | Msa1356600:five_prime_UTR |
GGAAATGGGGTCTGGTAGTG+TGG | 0.550619 | tig0015809:-51887 | None:intergenic |
TGGGTACATACCTGTATGAA+AGG | 0.550622 | tig0015809:+55809 | Msa1356600:CDS |
GCATTGCAAGACTATTATGA+AGG | 0.553126 | tig0015809:+51996 | Msa1356600:CDS |
TATTAGAGATATTGCACACT+GGG | 0.555135 | tig0015809:+53377 | Msa1356600:CDS |
CCTCTATTTCTACAACACTA+AGG | 0.555763 | tig0015809:+56454 | Msa1356600:CDS |
TCTTGTTGCTTCTTCTCACA+AGG | 0.556164 | tig0015809:+53488 | Msa1356600:CDS |
AATCTAGTAGCTTATTCTTG+GGG | 0.557727 | tig0015809:+52254 | Msa1356600:CDS |
CAACAAGAAAATCAGCATCA+AGG | 0.558160 | tig0015809:-53473 | None:intergenic |
CCCAACCCAACCAATGGCGA+TGG | 0.558816 | tig0015809:-51240 | None:intergenic |
AGAAGTTGACCGTGTCATGA+AGG | 0.561968 | tig0015809:-56502 | None:intergenic |
CATTTGCTTGATCCGACACG+TGG | 0.567329 | tig0015809:-51213 | None:intergenic |
GAAGTTGACCGTGTCATGAA+GGG | 0.567742 | tig0015809:-56501 | None:intergenic |
TATGGTGTACTCTTTCACAC+TGG | 0.567865 | tig0015809:+56800 | Msa1356600:three_prime_UTR |
GAAGCCTGCAGCTGTTGTGA+AGG | 0.567977 | tig0015809:+51974 | Msa1356600:CDS |
GCTCGTTTGACTTCTTTCGA+AGG | 0.577103 | tig0015809:-55871 | None:intergenic |
GTGTTGCAGCAAATGTATAC+CGG | 0.577878 | tig0015809:-56727 | None:intergenic |
CTGGTAGTGTGGCCCAAAGA+GGG | 0.578324 | tig0015809:-51876 | None:intergenic |
ATTACAGTAGGCCTTAATTG+TGG | 0.580967 | tig0015809:+56662 | Msa1356600:three_prime_UTR |
TGACCCCTAAATACCGATGG+AGG | 0.582901 | tig0015809:-56412 | None:intergenic |
TTTGGAATTCTCCTATTGGG+TGG | 0.589480 | tig0015809:+51688 | Msa1356600:five_prime_UTR |
ACCCCTAAATACCGATGGAG+GGG | 0.591422 | tig0015809:-56410 | None:intergenic |
CATGTGTGGAACACTCTGGC+AGG | 0.593828 | tig0015809:-53433 | None:intergenic |
GGCTTGTCAAATTTAAAACA+AGG | 0.594239 | tig0015809:+52275 | Msa1356600:CDS |
GACCCCTAAATACCGATGGA+GGG | 0.595603 | tig0015809:-56411 | None:intergenic |
ATCACAGCGCAATTGTTCCA+TGG | 0.596198 | tig0015809:+52662 | Msa1356600:CDS |
CTGCCAGAGTGTTCCACACA+TGG | 0.600132 | tig0015809:+53434 | Msa1356600:CDS |
TCTGGTAGTGTGGCCCAAAG+AGG | 0.600966 | tig0015809:-51877 | None:intergenic |
TGACCGTGTCATGAAGGGCA+TGG | 0.603142 | tig0015809:-56496 | None:intergenic |
CATTGACCCCTAAATACCGA+TGG | 0.603227 | tig0015809:-56415 | None:intergenic |
TATCCATGCCCTTCATGACA+CGG | 0.605173 | tig0015809:+56493 | Msa1356600:CDS |
TCGTTTGACTTCTTTCGAAG+GGG | 0.606212 | tig0015809:-55869 | None:intergenic |
AACCTGTCTTACAGATGTGT+GGG | 0.606697 | tig0015809:+53577 | Msa1356600:intron |
GAACCTGTCTTACAGATGTG+TGG | 0.607400 | tig0015809:+53576 | Msa1356600:intron |
ATTGTGCCCAACCCCTCCAT+CGG | 0.607814 | tig0015809:+56399 | Msa1356600:CDS |
AGTGGAGAACAGCGGCGGCG+AGG | 0.608765 | tig0015809:-51368 | None:intergenic |
AAAGAGGGAGAACTAAGAGT+TGG | 0.613517 | tig0015809:-51861 | None:intergenic |
TATTGCACACTGGGCACATG+GGG | 0.615050 | tig0015809:+53386 | Msa1356600:CDS |
CCACCATGTGTGGAACACTC+TGG | 0.619780 | tig0015809:-53437 | None:intergenic |
AGGCATCCACTAATTACAGT+AGG | 0.623139 | tig0015809:+56650 | Msa1356600:three_prime_UTR |
TGACGGTTGATGCACGAACA+GGG | 0.628972 | tig0015809:-51821 | None:intergenic |
GATGGAGGGGTTGGGCACAA+TGG | 0.630626 | tig0015809:-56397 | None:intergenic |
AAATTTAAAACAAGGAGATG+AGG | 0.633993 | tig0015809:+52283 | Msa1356600:CDS |
TATTTATGGATGTAGTGCAA+AGG | 0.635359 | tig0015809:+52130 | Msa1356600:intron |
GCCAAGTCTGACACGTGATG+TGG | 0.638545 | tig0015809:-51778 | None:intergenic |
CTATTAGAGATATTGCACAC+TGG | 0.643145 | tig0015809:+53376 | Msa1356600:CDS |
ATATTGCACACTGGGCACAT+GGG | 0.643244 | tig0015809:+53385 | Msa1356600:CDS |
AGCTGATTCATACTCGTCTG+TGG | 0.647061 | tig0015809:-52153 | None:intergenic |
ACGAGTATGAATCAGCTAGA+CGG | 0.649988 | tig0015809:+52159 | Msa1356600:CDS |
CTATCTATGAGATCAGCAAG+AGG | 0.652182 | tig0015809:-56629 | None:intergenic |
AGCTTAGTGGAGAACAGCGG+CGG | 0.652892 | tig0015809:-51373 | None:intergenic |
ATCGGGGCATACATTACTTG+AGG | 0.654297 | tig0015809:+52036 | Msa1356600:CDS |
TGGTGAAGTATAGGGAAATG+GGG | 0.664059 | tig0015809:-51900 | None:intergenic |
TATAAGAATCCAATGCCTGT+AGG | 0.671673 | tig0015809:-53600 | None:intergenic |
GTATGAATCAGCTAGACGGA+AGG | 0.672338 | tig0015809:+52163 | Msa1356600:CDS |
ACCCCTCCATCGGTATTTAG+GGG | 0.674227 | tig0015809:+56409 | Msa1356600:CDS |
CTATTTCTACAACACTAAGG+AGG | 0.678567 | tig0015809:+56457 | Msa1356600:CDS |
GAAATGTTGCAAGATCAGTA+GGG | 0.688737 | tig0015809:-55927 | None:intergenic |
ATGGAGGCATGGAAGACAGG+AGG | 0.692069 | tig0015809:-53635 | None:intergenic |
CCAGAGTGTTCCACACATGG+TGG | 0.696122 | tig0015809:+53437 | Msa1356600:CDS |
AAGTTCACAAACCTGGACGG+AGG | 0.708907 | tig0015809:-53887 | None:intergenic |
TACAATTCAAACGTGCATCG+GGG | 0.710508 | tig0015809:+52020 | Msa1356600:CDS |
CAGAGCTTAGTGGAGAACAG+CGG | 0.747768 | tig0015809:-51376 | None:intergenic |
CAGGGAGATAAGTTAAACGG+CGG | 0.749242 | tig0015809:-51803 | None:intergenic |
TGATTGAACAGCAATAACTG+GGG | 0.771247 | tig0015809:-51746 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTATTTAATTCCATTT+TGG | + | tig0015809:51442-51461 | Msa1356600:intron | 10.0% |
!!! | TAAACAATTTTTTATGAAAA+AGG | + | tig0015809:56033-56052 | Msa1356600:intron | 10.0% |
!!! | TTATTCATAAACTTTTATAT+AGG | + | tig0015809:56118-56137 | Msa1356600:intron | 10.0% |
!! | TGGCTATTTATTTATTATTA+TGG | - | tig0015809:51169-51188 | None:intergenic | 15.0% |
!! | TCATGTTTAAAAATTTAGAT+GGG | - | tig0015809:52407-52426 | None:intergenic | 15.0% |
!! | ATCATGTTTAAAAATTTAGA+TGG | - | tig0015809:52408-52427 | None:intergenic | 15.0% |
!! | TATAATAACTTACCTAAAAA+TGG | - | tig0015809:53657-53676 | None:intergenic | 15.0% |
!! | AAAACAAAATCTTATTAACA+TGG | - | tig0015809:53770-53789 | None:intergenic | 15.0% |
!!! | TGTATATCATTTTTAAGATA+AGG | - | tig0015809:53935-53954 | None:intergenic | 15.0% |
!! | ATCTTAAAAATGATATACAT+TGG | + | tig0015809:53936-53955 | Msa1356600:intron | 15.0% |
!! | GGTTATATTAAATTTAGAAA+AGG | - | tig0015809:54239-54258 | None:intergenic | 15.0% |
!! | AATAAATAGCCAGTAAAAAT+TGG | + | tig0015809:51177-51196 | Msa1356600:five_prime_UTR | 20.0% |
!! | ATCATAATTCAATTCATACT+AGG | + | tig0015809:51402-51421 | Msa1356600:five_prime_UTR | 20.0% |
!!! | ATTATTGTGCTTGTTAAATT+TGG | + | tig0015809:52064-52083 | Msa1356600:intron | 20.0% |
!!! | TGTTAAATTTGGAATTACAT+TGG | + | tig0015809:52075-52094 | Msa1356600:intron | 20.0% |
!! | TTTATGTGCACAATTATTTA+TGG | + | tig0015809:52116-52135 | Msa1356600:intron | 20.0% |
!! | CATGTTTAAAAATTTAGATG+GGG | - | tig0015809:52406-52425 | None:intergenic | 20.0% |
!!! | TTGTGCATATTTTTAAGATT+CGG | + | tig0015809:52434-52453 | Msa1356600:intron | 20.0% |
!! | ATCAAATGTGATATTGAAAT+AGG | + | tig0015809:52482-52501 | Msa1356600:intron | 20.0% |
!!! | TTTTACATGAGCATATTTAT+TGG | - | tig0015809:52595-52614 | None:intergenic | 20.0% |
!!! | TTTATAGGTTTTGACATTAA+CGG | + | tig0015809:52909-52928 | Msa1356600:intron | 20.0% |
!! | ATTTCCAATATTCAACTATA+AGG | + | tig0015809:53073-53092 | Msa1356600:intron | 20.0% |
!! | TTTCCAATATTCAACTATAA+GGG | + | tig0015809:53074-53093 | Msa1356600:intron | 20.0% |
!!! | ACCAAGTTTAAATGTTTTTA+GGG | - | tig0015809:53182-53201 | None:intergenic | 20.0% |
!! | TTTAGGTAAGTTATTATACA+CGG | + | tig0015809:53659-53678 | Msa1356600:intron | 20.0% |
!! | AATGATTTCAGATGTATATT+TGG | + | tig0015809:53844-53863 | Msa1356600:CDS | 20.0% |
!! | GTATCTTATTATTATATCTG+AGG | + | tig0015809:54344-54363 | Msa1356600:intron | 20.0% |
!! | ATTATAACGATAACATTGAA+GGG | - | tig0015809:55402-55421 | None:intergenic | 20.0% |
!! | AATTATAACGATAACATTGA+AGG | - | tig0015809:55403-55422 | None:intergenic | 20.0% |
!! | AAAATCATTAATTTAGCTAG+TGG | - | tig0015809:55430-55449 | None:intergenic | 20.0% |
!!! | TTTGTAACACATAAATTTTC+AGG | - | tig0015809:56704-56723 | None:intergenic | 20.0% |
!! | TCAATGAATTTAGAGTAGAA+AGG | - | tig0015809:51475-51494 | None:intergenic | 25.0% |
!!! | TTTTTTCTTAGCCAAGATTT+TGG | + | tig0015809:51670-51689 | Msa1356600:five_prime_UTR | 25.0% |
!! | TTGGAATTACATTGGTAATT+TGG | + | tig0015809:52083-52102 | Msa1356600:intron | 25.0% |
! | TAATTGTGCACATAAACATT+TGG | - | tig0015809:52112-52131 | None:intergenic | 25.0% |
!! | AAATTTAAAACAAGGAGATG+AGG | + | tig0015809:52283-52302 | Msa1356600:CDS | 25.0% |
! | AAGTTCTATTCCTTTATGTT+TGG | + | tig0015809:52556-52575 | Msa1356600:intron | 25.0% |
! | TAATGACAATCCAAACATAA+AGG | - | tig0015809:52569-52588 | None:intergenic | 25.0% |
! | TTACATACACTCATATAAAG+AGG | + | tig0015809:53050-53069 | Msa1356600:intron | 25.0% |
! | ACCCTAAAAACATTTAAACT+TGG | + | tig0015809:53178-53197 | Msa1356600:intron | 25.0% |
!! | CACCAAGTTTAAATGTTTTT+AGG | - | tig0015809:53183-53202 | None:intergenic | 25.0% |
! | AAAAACCATTGAAACAATTG+GGG | - | tig0015809:53238-53257 | None:intergenic | 25.0% |
! | GAAAAACCATTGAAACAATT+GGG | - | tig0015809:53239-53258 | None:intergenic | 25.0% |
! | TGAAAAACCATTGAAACAAT+TGG | - | tig0015809:53240-53259 | None:intergenic | 25.0% |
! | TGGATTCTTATATGGTAAAA+TGG | + | tig0015809:53611-53630 | Msa1356600:CDS | 25.0% |
! | AATAACTTACCTAAAAATGG+AGG | - | tig0015809:53654-53673 | None:intergenic | 25.0% |
! | ACATGAACAACTAGTTAAAA+TGG | + | tig0015809:53707-53726 | Msa1356600:intron | 25.0% |
! | AGAAAAAATCCTGTTTGTTT+AGG | + | tig0015809:53742-53761 | Msa1356600:intron | 25.0% |
!! | TTTTGTAGCTAATACATTTC+CGG | + | tig0015809:53786-53805 | Msa1356600:intron | 25.0% |
!! | AAAAATGATATACATTGGCT+TGG | + | tig0015809:53941-53960 | Msa1356600:intron | 25.0% |
!!! | AAAATGATATACATTGGCTT+GGG | + | tig0015809:53942-53961 | Msa1356600:intron | 25.0% |
!!! | TTTTGGTTATAGAATCCTAT+GGG | - | tig0015809:54114-54133 | None:intergenic | 25.0% |
!!! | TTTTTGGTTATAGAATCCTA+TGG | - | tig0015809:54115-54134 | None:intergenic | 25.0% |
!!! | TGGTAGATCGAATAATTTTT+TGG | - | tig0015809:54131-54150 | None:intergenic | 25.0% |
! | ATTGACAACGATCATTTAAA+TGG | - | tig0015809:54151-54170 | None:intergenic | 25.0% |
! | GATACAATACAAGTAATTGA+TGG | - | tig0015809:54329-54348 | None:intergenic | 25.0% |
!! | ATTTTACCATACTAGATTTG+AGG | + | tig0015809:54369-54388 | Msa1356600:intron | 25.0% |
! | TTTATAGTCAATAAGACTGA+AGG | - | tig0015809:54496-54515 | None:intergenic | 25.0% |
! | AAATCAACTAAATCATAACG+AGG | - | tig0015809:54704-54723 | None:intergenic | 25.0% |
! | AAATACAAGAATAAACCACA+GGG | - | tig0015809:54909-54928 | None:intergenic | 25.0% |
! | TAAATACAAGAATAAACCAC+AGG | - | tig0015809:54910-54929 | None:intergenic | 25.0% |
! | AAGATTCACTTCTAATCATT+TGG | + | tig0015809:54960-54979 | Msa1356600:intron | 25.0% |
! | AGATTCACTTCTAATCATTT+GGG | + | tig0015809:54961-54980 | Msa1356600:intron | 25.0% |
!! | AGCTTAACTACAAGTTATTT+TGG | - | tig0015809:55134-55153 | None:intergenic | 25.0% |
! | AATATACATTAATGAGGTTG+AGG | - | tig0015809:55352-55371 | None:intergenic | 25.0% |
!! | GCTTTGAATATACATTAATG+AGG | - | tig0015809:55358-55377 | None:intergenic | 25.0% |
! | TTATTAGGTGAAAACAATGT+AGG | + | tig0015809:55578-55597 | Msa1356600:intron | 25.0% |
!! | TATGACATCCAAATTTTCAT+AGG | + | tig0015809:55780-55799 | Msa1356600:intron | 25.0% |
! | AATAAGTTAAAAACAACCCA+TGG | + | tig0015809:56141-56160 | Msa1356600:intron | 25.0% |
! | TAATTGATTACAGACTAAGA+AGG | - | tig0015809:56257-56276 | None:intergenic | 25.0% |
!! | TACTAAATTGCCCAAATTTT+CGG | + | tig0015809:56275-56294 | Msa1356600:intron | 25.0% |
! | ATTTATGTGTTACAAAATGC+CGG | + | tig0015809:56708-56727 | Msa1356600:three_prime_UTR | 25.0% |
! | AATTTATACTCGCAATAGTA+TGG | + | tig0015809:56782-56801 | Msa1356600:three_prime_UTR | 25.0% |
! | AAAGTCGAACCAATTTTTAC+TGG | - | tig0015809:51189-51208 | None:intergenic | 30.0% |
! | AATTTAGAGTAGAAAGGAGA+GGG | - | tig0015809:51469-51488 | None:intergenic | 30.0% |
GAAGAGAAACATTAAAGAGT+CGG | - | tig0015809:51627-51646 | None:intergenic | 30.0% | |
ATAGGAGAATTCCAAAATCT+TGG | - | tig0015809:51684-51703 | None:intergenic | 30.0% | |
!!! | AGATTTTGGAATTCTCCTAT+TGG | + | tig0015809:51684-51703 | Msa1356600:five_prime_UTR | 30.0% |
!!! | GATTTTGGAATTCTCCTATT+GGG | + | tig0015809:51685-51704 | Msa1356600:five_prime_UTR | 30.0% |
! | GAATTACATTGGTAATTTGG+AGG | + | tig0015809:52086-52105 | Msa1356600:intron | 30.0% |
TATTTATGGATGTAGTGCAA+AGG | + | tig0015809:52130-52149 | Msa1356600:intron | 30.0% | |
TCAATCTAGTAGCTTATTCT+TGG | + | tig0015809:52252-52271 | Msa1356600:CDS | 30.0% | |
CAATCTAGTAGCTTATTCTT+GGG | + | tig0015809:52253-52272 | Msa1356600:CDS | 30.0% | |
AATCTAGTAGCTTATTCTTG+GGG | + | tig0015809:52254-52273 | Msa1356600:CDS | 30.0% | |
! | GGCTTGTCAAATTTAAAACA+AGG | + | tig0015809:52275-52294 | Msa1356600:CDS | 30.0% |
!!! | ATGTTTGGATTAGCGTATTT+TGG | + | tig0015809:52349-52368 | Msa1356600:intron | 30.0% |
!! | GAAATAGGAGTTTTAATACC+AGG | + | tig0015809:52497-52516 | Msa1356600:intron | 30.0% |
TAAAGGAATAGAACTTCAAC+CGG | - | tig0015809:52552-52571 | None:intergenic | 30.0% | |
CAATTAGTAGCTCAAAAAGT+TGG | + | tig0015809:52685-52704 | Msa1356600:CDS | 30.0% | |
! | CTATATCTGGAATTTCATCT+TGG | - | tig0015809:52738-52757 | None:intergenic | 30.0% |
TCCAGATATAGACAAATTGA+AGG | + | tig0015809:52747-52766 | Msa1356600:CDS | 30.0% | |
TCCTTCAATTTGTCTATATC+TGG | - | tig0015809:52751-52770 | None:intergenic | 30.0% | |
AAAAGTTTCTGTATTCGTAC+TGG | - | tig0015809:52993-53012 | None:intergenic | 30.0% | |
AGTCCCTTATAGTTGAATAT+TGG | - | tig0015809:53080-53099 | None:intergenic | 30.0% | |
AAAACCATTGAAACAATTGG+GGG | - | tig0015809:53237-53256 | None:intergenic | 30.0% | |
CTATCATTGTGGAAAATAAG+AGG | - | tig0015809:53271-53290 | None:intergenic | 30.0% | |
!! | GAGTAAAAGTACTATCATTG+TGG | - | tig0015809:53282-53301 | None:intergenic | 30.0% |
TATTAGAGATATTGCACACT+GGG | + | tig0015809:53377-53396 | Msa1356600:CDS | 30.0% | |
ACTAGTTGTTCATGTTTGAT+AGG | - | tig0015809:53702-53721 | None:intergenic | 30.0% | |
GAAAAAAAAGTTCACAAACC+TGG | - | tig0015809:53897-53916 | None:intergenic | 30.0% | |
TTTGGTTATAGAATCCTATG+GGG | - | tig0015809:54113-54132 | None:intergenic | 30.0% | |
AGAGTTTCCATTTCTTATCT+TGG | + | tig0015809:54190-54209 | Msa1356600:intron | 30.0% | |
GAGTTTCCATTTCTTATCTT+GGG | + | tig0015809:54191-54210 | Msa1356600:intron | 30.0% | |
AAATGACTGTAGGTTATGAA+TGG | - | tig0015809:54260-54279 | None:intergenic | 30.0% | |
AGAAAACTAGAGTAATTCAC+AGG | + | tig0015809:54515-54534 | Msa1356600:intron | 30.0% | |
AAGAGGATAGTAAAGTAAAC+GGG | - | tig0015809:54585-54604 | None:intergenic | 30.0% | |
GAAGAGGATAGTAAAGTAAA+CGG | - | tig0015809:54586-54605 | None:intergenic | 30.0% | |
!! | GGTATCATCTTTTGAAAATC+TGG | + | tig0015809:54775-54794 | Msa1356600:intron | 30.0% |
CATTAGATGGTTAAGCAAAT+TGG | - | tig0015809:54805-54824 | None:intergenic | 30.0% | |
!! | TTGGCTTTATTGTCATTAGA+TGG | - | tig0015809:54818-54837 | None:intergenic | 30.0% |
CAATCAATACATTAAGTGCT+TGG | - | tig0015809:54837-54856 | None:intergenic | 30.0% | |
CTGATCAAGTTAAACATTGT+CGG | - | tig0015809:55189-55208 | None:intergenic | 30.0% | |
GAAGAAGTAAAACAACAATC+AGG | - | tig0015809:55286-55305 | None:intergenic | 30.0% | |
! | CAAAATCAGTTTTCATACAG+AGG | + | tig0015809:55508-55527 | Msa1356600:intron | 30.0% |
CTAACACTCACTTTCTTATT+AGG | + | tig0015809:55563-55582 | Msa1356600:intron | 30.0% | |
TTGTTGGGTTAAATCAATGT+AGG | - | tig0015809:55644-55663 | None:intergenic | 30.0% | |
CTAACACTTATTCTCTTGTT+GGG | - | tig0015809:55659-55678 | None:intergenic | 30.0% | |
TCTAACACTTATTCTCTTGT+TGG | - | tig0015809:55660-55679 | None:intergenic | 30.0% | |
TATTTCATCTTCTTACCTGT+TGG | - | tig0015809:55957-55976 | None:intergenic | 30.0% | |
AACAAGAAAATGCATATAGC+TGG | - | tig0015809:55986-56005 | None:intergenic | 30.0% | |
TTAACTAATGACATGTCCAT+GGG | - | tig0015809:56160-56179 | None:intergenic | 30.0% | |
ATTAACTAATGACATGTCCA+TGG | - | tig0015809:56161-56180 | None:intergenic | 30.0% | |
AGTGTCTATGTCATGAAATA+AGG | + | tig0015809:56210-56229 | Msa1356600:intron | 30.0% | |
CCAATTACTACCGAAAATTT+GGG | - | tig0015809:56288-56307 | None:intergenic | 30.0% | |
TCCAATTACTACCGAAAATT+TGG | - | tig0015809:56289-56308 | None:intergenic | 30.0% | |
ACATCATCGAAATTCAAGAA+AGG | - | tig0015809:56340-56359 | None:intergenic | 30.0% | |
! | ATGATGTATCATTTTCAGCA+TGG | + | tig0015809:56353-56372 | Msa1356600:intron | 30.0% |
CTTCAATTCATTCAAGTAGT+CGG | + | tig0015809:56523-56542 | Msa1356600:exon | 30.0% | |
!!! | ATTTTGACTGTACATCAGTT+AGG | + | tig0015809:56568-56587 | Msa1356600:three_prime_UTR | 30.0% |
!! | TTAGGATTGGTTCAATTGAT+AGG | + | tig0015809:56586-56605 | Msa1356600:three_prime_UTR | 30.0% |
GACATGTTATTCCACAATTA+AGG | - | tig0015809:56676-56695 | None:intergenic | 30.0% | |
!! | GTAACACATAAATTTTCAGG+AGG | - | tig0015809:56701-56720 | None:intergenic | 30.0% |
TTATGATGATCAGAGCTTAG+TGG | - | tig0015809:51389-51408 | None:intergenic | 35.0% | |
! | GAATTTAGAGTAGAAAGGAG+AGG | - | tig0015809:51470-51489 | None:intergenic | 35.0% |
!! | ATAAAAGTTTTGACCAGGGT+GGG | - | tig0015809:51519-51538 | None:intergenic | 35.0% |
!! | AGCCATAAAAGTTTTGACCA+GGG | - | tig0015809:51523-51542 | None:intergenic | 35.0% |
!! | TAGCCATAAAAGTTTTGACC+AGG | - | tig0015809:51524-51543 | None:intergenic | 35.0% |
AATCATGCAACAAACACCAT+CGG | - | tig0015809:51580-51599 | None:intergenic | 35.0% | |
TGATTGAACAGCAATAACTG+GGG | - | tig0015809:51749-51768 | None:intergenic | 35.0% | |
GTGATTGAACAGCAATAACT+GGG | - | tig0015809:51750-51769 | None:intergenic | 35.0% | |
AGTGATTGAACAGCAATAAC+TGG | - | tig0015809:51751-51770 | None:intergenic | 35.0% | |
GAACAGGGAGATAAGTTAAA+CGG | - | tig0015809:51809-51828 | None:intergenic | 35.0% | |
TTACTTCCTGGTGAAGTATA+GGG | - | tig0015809:51911-51930 | None:intergenic | 35.0% | |
TTTACTTCCTGGTGAAGTAT+AGG | - | tig0015809:51912-51931 | None:intergenic | 35.0% | |
ATACTTCACCAGGAAGTAAA+TGG | + | tig0015809:51912-51931 | Msa1356600:CDS | 35.0% | |
GCATTGCAAGACTATTATGA+AGG | + | tig0015809:51996-52015 | Msa1356600:CDS | 35.0% | |
GTTACAATTCAAACGTGCAT+CGG | + | tig0015809:52018-52037 | Msa1356600:CDS | 35.0% | |
TTACAATTCAAACGTGCATC+GGG | + | tig0015809:52019-52038 | Msa1356600:CDS | 35.0% | |
!! | ATTTCAACTTGCTGCATGTT+TGG | + | tig0015809:52334-52353 | Msa1356600:intron | 35.0% |
!! | TTAAGATTCGGAGAGTGTTA+AGG | + | tig0015809:52446-52465 | Msa1356600:intron | 35.0% |
!! | ATAGGAGTTTTAATACCAGG+AGG | + | tig0015809:52500-52519 | Msa1356600:intron | 35.0% |
AAAGGAATAGAACTTCAACC+GGG | - | tig0015809:52551-52570 | None:intergenic | 35.0% | |
! | TTTTGAGCTACTAATTGCCA+TGG | - | tig0015809:52682-52701 | None:intergenic | 35.0% |
CATCATGTTTCAAATGTGCT+TGG | + | tig0015809:52805-52824 | Msa1356600:CDS | 35.0% | |
! | TTTTGACATTAACGGTCTTC+TGG | + | tig0015809:52917-52936 | Msa1356600:intron | 35.0% |
! | CATGTTTGCTAAGTACTAGT+CGG | - | tig0015809:53121-53140 | None:intergenic | 35.0% |
TATTGGGTCTCAATATGCAT+AGG | - | tig0015809:53149-53168 | None:intergenic | 35.0% | |
!!! | AATGTTTTTAGGGTCACGTT+GGG | - | tig0015809:53172-53191 | None:intergenic | 35.0% |
!!! | AAATGTTTTTAGGGTCACGT+TGG | - | tig0015809:53173-53192 | None:intergenic | 35.0% |
CAGTGTGCAATATCTCTAAT+AGG | - | tig0015809:53378-53397 | None:intergenic | 35.0% | |
CTATTAGAGATATTGCACAC+TGG | + | tig0015809:53376-53395 | Msa1356600:CDS | 35.0% | |
CAACAAGAAAATCAGCATCA+AGG | - | tig0015809:53476-53495 | None:intergenic | 35.0% | |
TATAAGAATCCAATGCCTGT+AGG | - | tig0015809:53603-53622 | None:intergenic | 35.0% | |
!! | ACAGGCATTGGATTCTTATA+TGG | + | tig0015809:53603-53622 | Msa1356600:CDS | 35.0% |
AAAAAGTTCACAAACCTGGA+CGG | - | tig0015809:53893-53912 | None:intergenic | 35.0% | |
!! | ATTGGTATTTTGAACCCCAT+AGG | + | tig0015809:54096-54115 | Msa1356600:intron | 35.0% |
ATCAGTCCCAAGATAAGAAA+TGG | - | tig0015809:54200-54219 | None:intergenic | 35.0% | |
AAAAAATTAGCACTGTGAGG+CGG | - | tig0015809:54287-54306 | None:intergenic | 35.0% | |
AGCAAAAAATTAGCACTGTG+AGG | - | tig0015809:54290-54309 | None:intergenic | 35.0% | |
ATTGGTGAAGCAATTGGATT+AGG | + | tig0015809:54406-54425 | Msa1356600:CDS | 35.0% | |
CAGCAATTGATTACTTGTCT+GGG | + | tig0015809:54431-54450 | Msa1356600:CDS | 35.0% | |
! | ATTGATTACTTGTCTGGGAT+TGG | + | tig0015809:54436-54455 | Msa1356600:CDS | 35.0% |
! | TTGATTACTTGTCTGGGATT+GGG | + | tig0015809:54437-54456 | Msa1356600:CDS | 35.0% |
TACTTTACTATCCTCTTCTG+TGG | + | tig0015809:54588-54607 | Msa1356600:intron | 35.0% | |
!! | TGAAGCTTTTTCTCCTTCAT+GGG | + | tig0015809:54754-54773 | Msa1356600:intron | 35.0% |
TCAAAAGATGATACCCATGA+AGG | - | tig0015809:54770-54789 | None:intergenic | 35.0% | |
CAACAATCAGGATGACAAAA+TGG | - | tig0015809:55274-55293 | None:intergenic | 35.0% | |
! | TTTTCATACAGAGGATTGCT+AGG | + | tig0015809:55517-55536 | Msa1356600:intron | 35.0% |
TAGGTCCTACTACTTTATGT+GGG | + | tig0015809:55597-55616 | Msa1356600:intron | 35.0% | |
! | AAATTTTCATAGGTCGAGCT+GGG | + | tig0015809:55790-55809 | Msa1356600:intron | 35.0% |
TCCCAAATATTCGCATCTAT+GGG | + | tig0015809:55842-55861 | Msa1356600:CDS | 35.0% | |
GAAATGTTGCAAGATCAGTA+GGG | - | tig0015809:55930-55949 | None:intergenic | 35.0% | |
AGAAATGTTGCAAGATCAGT+AGG | - | tig0015809:55931-55950 | None:intergenic | 35.0% | |
TACTGATCTTGCAACATTTC+TGG | + | tig0015809:55930-55949 | Msa1356600:CDS | 35.0% | |
! | CCCAAATTTTCGGTAGTAAT+TGG | + | tig0015809:56285-56304 | Msa1356600:intron | 35.0% |
ATTGGAATAGCTGTTGAACT+TGG | + | tig0015809:56303-56322 | Msa1356600:intron | 35.0% | |
CCTTAGTGTTGTAGAAATAG+AGG | - | tig0015809:56457-56476 | None:intergenic | 35.0% | |
!! | CCTCTATTTCTACAACACTA+AGG | + | tig0015809:56454-56473 | Msa1356600:CDS | 35.0% |
!! | CTATTTCTACAACACTAAGG+AGG | + | tig0015809:56457-56476 | Msa1356600:CDS | 35.0% |
TTAAGGCCTACTGTAATTAG+TGG | - | tig0015809:56659-56678 | None:intergenic | 35.0% | |
ATTACAGTAGGCCTTAATTG+TGG | + | tig0015809:56662-56681 | Msa1356600:three_prime_UTR | 35.0% | |
! | TTTTAACCCAACCCAACCAA+TGG | - | tig0015809:51249-51268 | None:intergenic | 40.0% |
GCAAGTATGCAACTGTTAAC+TGG | - | tig0015809:51273-51292 | None:intergenic | 40.0% | |
!! | CATAAAAGTTTTGACCAGGG+TGG | - | tig0015809:51520-51539 | None:intergenic | 40.0% |
! | CACCCTGGTCAAAACTTTTA+TGG | + | tig0015809:51518-51537 | Msa1356600:intron | 40.0% |
CAATTCACTGCTGCAAGTTA+AGG | - | tig0015809:51551-51570 | None:intergenic | 40.0% | |
CAGTGAATTGAATTTCCCGA+TGG | + | tig0015809:51561-51580 | Msa1356600:intron | 40.0% | |
ATCATGCAACAAACACCATC+GGG | - | tig0015809:51579-51598 | None:intergenic | 40.0% | |
! | TTTGGAATTCTCCTATTGGG+TGG | + | tig0015809:51688-51707 | Msa1356600:five_prime_UTR | 40.0% |
TTCAGCTACTGCTTGATTGA+CGG | - | tig0015809:51841-51860 | None:intergenic | 40.0% | |
AAAGAGGGAGAACTAAGAGT+TGG | - | tig0015809:51864-51883 | None:intergenic | 40.0% | |
! | AACTCTTAGTTCTCCCTCTT+TGG | + | tig0015809:51863-51882 | Msa1356600:CDS | 40.0% |
! | ACTCTTAGTTCTCCCTCTTT+GGG | + | tig0015809:51864-51883 | Msa1356600:CDS | 40.0% |
TGGTGAAGTATAGGGAAATG+GGG | - | tig0015809:51903-51922 | None:intergenic | 40.0% | |
CTGGTGAAGTATAGGGAAAT+GGG | - | tig0015809:51904-51923 | None:intergenic | 40.0% | |
!! | GTTTTGAGCCATTTACTTCC+TGG | - | tig0015809:51923-51942 | None:intergenic | 40.0% |
TACAATTCAAACGTGCATCG+GGG | + | tig0015809:52020-52039 | Msa1356600:CDS | 40.0% | |
ACGAGTATGAATCAGCTAGA+CGG | + | tig0015809:52159-52178 | Msa1356600:CDS | 40.0% | |
TTAATACCAGGAGGAGACAT+TGG | + | tig0015809:52509-52528 | Msa1356600:intron | 40.0% | |
TAATACCAGGAGGAGACATT+GGG | + | tig0015809:52510-52529 | Msa1356600:intron | 40.0% | |
ACCTATAAAGTTAACCCAGC+AGG | - | tig0015809:52898-52917 | None:intergenic | 40.0% | |
TTGAATCAACGTTGCATCGA+GGG | + | tig0015809:52958-52977 | Msa1356600:intron | 40.0% | |
CAGAAGCTACAGAAAAGCAA+AGG | - | tig0015809:53350-53369 | None:intergenic | 40.0% | |
! | TCTTGTTGCTTCTTCTCACA+AGG | + | tig0015809:53488-53507 | Msa1356600:CDS | 40.0% |
!! | AGTAACTTGTTACACTGGTC+TGG | - | tig0015809:53556-53575 | None:intergenic | 40.0% |
!! | GGTTCAGTAACTTGTTACAC+TGG | - | tig0015809:53561-53580 | None:intergenic | 40.0% |
AACCTGTCTTACAGATGTGT+GGG | + | tig0015809:53577-53596 | Msa1356600:intron | 40.0% | |
!! | TCTTCCATGCCTCCATTTTT+AGG | + | tig0015809:53642-53661 | Msa1356600:CDS | 40.0% |
CTTACCTAAAAATGGAGGCA+TGG | - | tig0015809:53649-53668 | None:intergenic | 40.0% | |
AACATGGTGCCTAAACAAAC+AGG | - | tig0015809:53754-53773 | None:intergenic | 40.0% | |
CCTGAAACAAGCAAAAGATG+AGG | - | tig0015809:53815-53834 | None:intergenic | 40.0% | |
! | CCTCATCTTTTGCTTGTTTC+AGG | + | tig0015809:53812-53831 | Msa1356600:intron | 40.0% |
! | CATCTTTTGCTTGTTTCAGG+CGG | + | tig0015809:53815-53834 | Msa1356600:intron | 40.0% |
!! | ATGATATACATTGGCTTGGG+TGG | + | tig0015809:53945-53964 | Msa1356600:intron | 40.0% |
TCAGCTTTCTTTCCTACACA+GGG | - | tig0015809:53988-54007 | None:intergenic | 40.0% | |
TTCAGCTTTCTTTCCTACAC+AGG | - | tig0015809:53989-54008 | None:intergenic | 40.0% | |
TGTAGGAAAGAAAGCTGAAG+AGG | + | tig0015809:53990-54009 | Msa1356600:intron | 40.0% | |
AGAAAGCTGAAGAGGATCAA+TGG | + | tig0015809:53998-54017 | Msa1356600:intron | 40.0% | |
TGGCTCTTGATGTTAGTCAT+TGG | + | tig0015809:54078-54097 | Msa1356600:intron | 40.0% | |
TGATCGTTGTCAATATCAGC+CGG | + | tig0015809:54157-54176 | Msa1356600:intron | 40.0% | |
TTATCTTGGGACTGATACTC+TGG | + | tig0015809:54204-54223 | Msa1356600:intron | 40.0% | |
! | TACCATACTAGATTTGAGGC+TGG | + | tig0015809:54373-54392 | Msa1356600:intron | 40.0% |
TTCCAGCCTCAAATCTAGTA+TGG | - | tig0015809:54378-54397 | None:intergenic | 40.0% | |
GCAGCAATTGATTACTTGTC+TGG | + | tig0015809:54430-54449 | Msa1356600:CDS | 40.0% | |
ACTCACCTCATACTCATGTA+TGG | - | tig0015809:54470-54489 | None:intergenic | 40.0% | |
! | TACAGAAGGTATGGCATTTG+AGG | - | tig0015809:54729-54748 | None:intergenic | 40.0% |
TTCAGCATCTACAGAAGGTA+TGG | - | tig0015809:54738-54757 | None:intergenic | 40.0% | |
AAAGCTTCAGCATCTACAGA+AGG | - | tig0015809:54743-54762 | None:intergenic | 40.0% | |
!! | CTGAAGCTTTTTCTCCTTCA+TGG | + | tig0015809:54753-54772 | Msa1356600:intron | 40.0% |
! | AGAATAAACCACAGGGTGTT+TGG | - | tig0015809:54902-54921 | None:intergenic | 40.0% |
TTCTAATCATTTGGGAGCTG+TGG | + | tig0015809:54969-54988 | Msa1356600:intron | 40.0% | |
GTAGGTCCTACTACTTTATG+TGG | + | tig0015809:55596-55615 | Msa1356600:intron | 40.0% | |
! | AGGTCCAGCACTTTGAAAAT+GGG | - | tig0015809:55624-55643 | None:intergenic | 40.0% |
! | TAGGTCCAGCACTTTGAAAA+TGG | - | tig0015809:55625-55644 | None:intergenic | 40.0% |
CAGCTCGACCTATGAAAATT+TGG | - | tig0015809:55791-55810 | None:intergenic | 40.0% | |
! | CAAATTTTCATAGGTCGAGC+TGG | + | tig0015809:55789-55808 | Msa1356600:intron | 40.0% |
TGGGTACATACCTGTATGAA+AGG | + | tig0015809:55809-55828 | Msa1356600:CDS | 40.0% | |
GTCCCAAATATTCGCATCTA+TGG | + | tig0015809:55841-55860 | Msa1356600:CDS | 40.0% | |
GCCCATAGATGCGAATATTT+GGG | - | tig0015809:55846-55865 | None:intergenic | 40.0% | |
! | TCGTTTGACTTCTTTCGAAG+GGG | - | tig0015809:55872-55891 | None:intergenic | 40.0% |
! | CTCGTTTGACTTCTTTCGAA+GGG | - | tig0015809:55873-55892 | None:intergenic | 40.0% |
GAATAGCTGTTGAACTTGGT+TGG | + | tig0015809:56307-56326 | Msa1356600:intron | 40.0% | |
! | GTATCATTTTCAGCATGGAG+TGG | + | tig0015809:56358-56377 | Msa1356600:intron | 40.0% |
GACTGTACATCAGTTAGGAT+TGG | + | tig0015809:56573-56592 | Msa1356600:three_prime_UTR | 40.0% | |
ATGAGATCAGCAAGAGGAAT+TGG | - | tig0015809:56626-56645 | None:intergenic | 40.0% | |
CTATCTATGAGATCAGCAAG+AGG | - | tig0015809:56632-56651 | None:intergenic | 40.0% | |
CTCTTGCTGATCTCATAGAT+AGG | + | tig0015809:56630-56649 | Msa1356600:three_prime_UTR | 40.0% | |
AGGCATCCACTAATTACAGT+AGG | + | tig0015809:56650-56669 | Msa1356600:three_prime_UTR | 40.0% | |
GTGTTGCAGCAAATGTATAC+CGG | - | tig0015809:56730-56749 | None:intergenic | 40.0% | |
TATGGTGTACTCTTTCACAC+TGG | + | tig0015809:56800-56819 | Msa1356600:three_prime_UTR | 40.0% | |
! | TCGACTTTTAAGCCACGTGT+CGG | + | tig0015809:51201-51220 | Msa1356600:five_prime_UTR | 45.0% |
CAAATGGTTTCCATCGCCAT+TGG | + | tig0015809:51230-51249 | Msa1356600:five_prime_UTR | 45.0% | |
AGAAAGGAGAGGGACCAAAA+TGG | - | tig0015809:51459-51478 | None:intergenic | 45.0% | |
! | CAGGGTGGGTTTGTTTAGTT+TGG | - | tig0015809:51505-51524 | None:intergenic | 45.0% |
CAAACTAAACAAACCCACCC+TGG | + | tig0015809:51503-51522 | Msa1356600:intron | 45.0% | |
TCCTATTGGGTGGTTAGCAA+TGG | + | tig0015809:51698-51717 | Msa1356600:exon | 45.0% | |
TCCATTGCTAACCACCCAAT+AGG | - | tig0015809:51702-51721 | None:intergenic | 45.0% | |
TAACTGGGGCTTGGAAGTTT+CGG | - | tig0015809:51735-51754 | None:intergenic | 45.0% | |
CAGGGAGATAAGTTAAACGG+CGG | - | tig0015809:51806-51825 | None:intergenic | 45.0% | |
AAGTATAGGGAAATGGGGTC+TGG | - | tig0015809:51898-51917 | None:intergenic | 45.0% | |
CCTGGTGAAGTATAGGGAAA+TGG | - | tig0015809:51905-51924 | None:intergenic | 45.0% | |
CCATTTCCCTATACTTCACC+AGG | + | tig0015809:51902-51921 | Msa1356600:CDS | 45.0% | |
ATCGGGGCATACATTACTTG+AGG | + | tig0015809:52036-52055 | Msa1356600:CDS | 45.0% | |
! | AGCTGATTCATACTCGTCTG+TGG | - | tig0015809:52156-52175 | None:intergenic | 45.0% |
GTATGAATCAGCTAGACGGA+AGG | + | tig0015809:52163-52182 | Msa1356600:CDS | 45.0% | |
AATACCAGGAGGAGACATTG+GGG | + | tig0015809:52511-52530 | Msa1356600:intron | 45.0% | |
ATCACAGCGCAATTGTTCCA+TGG | + | tig0015809:52662-52681 | Msa1356600:CDS | 45.0% | |
TGCTTGGTATGTTTCTCGTC+AGG | + | tig0015809:52821-52840 | Msa1356600:intron | 45.0% | |
TGTCAAAGATATCTGCCTGC+TGG | + | tig0015809:52880-52899 | Msa1356600:intron | 45.0% | |
GTCAAAGATATCTGCCTGCT+GGG | + | tig0015809:52881-52900 | Msa1356600:intron | 45.0% | |
GCCTGCTGGGTTAACTTTAT+AGG | + | tig0015809:52894-52913 | Msa1356600:intron | 45.0% | |
CTTGAATCAACGTTGCATCG+AGG | + | tig0015809:52957-52976 | Msa1356600:intron | 45.0% | |
TTAGGGTCACGTTGGGTATT+GGG | - | tig0015809:53165-53184 | None:intergenic | 45.0% | |
! | TTTAGGGTCACGTTGGGTAT+TGG | - | tig0015809:53166-53185 | None:intergenic | 45.0% |
AACAATTGGGGGCTGAAATG+AGG | - | tig0015809:53226-53245 | None:intergenic | 45.0% | |
TCAGCCCCCAATTGTTTCAA+TGG | + | tig0015809:53230-53249 | Msa1356600:intron | 45.0% | |
ATATTGCACACTGGGCACAT+GGG | + | tig0015809:53385-53404 | Msa1356600:CDS | 45.0% | |
TGAACATCAACCACCATGTG+TGG | - | tig0015809:53450-53469 | None:intergenic | 45.0% | |
! | TGTTACACTGGTCTGGAATC+TGG | - | tig0015809:53549-53568 | None:intergenic | 45.0% |
GAACCTGTCTTACAGATGTG+TGG | + | tig0015809:53576-53595 | Msa1356600:intron | 45.0% | |
! | AAAATGGAGGCATGGAAGAC+AGG | - | tig0015809:53641-53660 | None:intergenic | 45.0% |
CAAGCAAAAGATGAGGTTGC+CGG | - | tig0015809:53808-53827 | None:intergenic | 45.0% | |
!! | ATATACATTGGCTTGGGTGG+AGG | + | tig0015809:53948-53967 | Msa1356600:intron | 45.0% |
ACAGGTTTGATTCCCTGTGT+AGG | + | tig0015809:53973-53992 | Msa1356600:intron | 45.0% | |
TGACTAACATCAAGAGCCAG+AGG | - | tig0015809:54077-54096 | None:intergenic | 45.0% | |
GATCGTTGTCAATATCAGCC+GGG | + | tig0015809:54158-54177 | Msa1356600:intron | 45.0% | |
ATCGTTGTCAATATCAGCCG+GGG | + | tig0015809:54159-54178 | Msa1356600:intron | 45.0% | |
TCAATATCAGCCGGGGAAAA+AGG | + | tig0015809:54166-54185 | Msa1356600:intron | 45.0% | |
! | GGAAACTCTTCCTTTTTCCC+CGG | - | tig0015809:54179-54198 | None:intergenic | 45.0% |
AGGCGGAGAAAAATGACTGT+AGG | - | tig0015809:54270-54289 | None:intergenic | 45.0% | |
CCAATTGCTTCACCAATAGC+TGG | - | tig0015809:54403-54422 | None:intergenic | 45.0% | |
CCAGCTATTGGTGAAGCAAT+TGG | + | tig0015809:54400-54419 | Msa1356600:CDS | 45.0% | |
GCAAGCCATACATGAGTATG+AGG | + | tig0015809:54462-54481 | Msa1356600:CDS | 45.0% | |
ATGAGATGTCACCACAGAAG+AGG | - | tig0015809:54602-54621 | None:intergenic | 45.0% | |
TGGGTCCCACATAAAGTAGT+AGG | - | tig0015809:55605-55624 | None:intergenic | 45.0% | |
CTGACAGAAGCCTTTCATAC+AGG | - | tig0015809:55822-55841 | None:intergenic | 45.0% | |
GGCCCATAGATGCGAATATT+TGG | - | tig0015809:55847-55866 | None:intergenic | 45.0% | |
! | GCTCGTTTGACTTCTTTCGA+AGG | - | tig0015809:55874-55893 | None:intergenic | 45.0% |
! | TGCAACATTTCTGGACCAAC+AGG | + | tig0015809:55939-55958 | Msa1356600:CDS | 45.0% |
TAAATACCGATGGAGGGGTT+GGG | - | tig0015809:56408-56427 | None:intergenic | 45.0% | |
AACCCCTCCATCGGTATTTA+GGG | + | tig0015809:56408-56427 | Msa1356600:CDS | 45.0% | |
CATTGACCCCTAAATACCGA+TGG | - | tig0015809:56418-56437 | None:intergenic | 45.0% | |
TATCCATGCCCTTCATGACA+CGG | + | tig0015809:56493-56512 | Msa1356600:CDS | 45.0% | |
GAAGTTGACCGTGTCATGAA+GGG | - | tig0015809:56504-56523 | None:intergenic | 45.0% | |
AGAAGTTGACCGTGTCATGA+AGG | - | tig0015809:56505-56524 | None:intergenic | 45.0% | |
CATTTGCTTGATCCGACACG+TGG | - | tig0015809:51216-51235 | None:intergenic | 50.0% | |
CACGTGTCGGATCAAGCAAA+TGG | + | tig0015809:51214-51233 | Msa1356600:five_prime_UTR | 50.0% | |
TGGTTTCCATCGCCATTGGT+TGG | + | tig0015809:51234-51253 | Msa1356600:five_prime_UTR | 50.0% | |
! | GGTTTCCATCGCCATTGGTT+GGG | + | tig0015809:51235-51254 | Msa1356600:five_prime_UTR | 50.0% |
CAGAGCTTAGTGGAGAACAG+CGG | - | tig0015809:51379-51398 | None:intergenic | 50.0% | |
GAACAGCAATAACTGGGGCT+TGG | - | tig0015809:51744-51763 | None:intergenic | 50.0% | |
TCTGACACGTGATGTGGTTC+TGG | - | tig0015809:51775-51794 | None:intergenic | 50.0% | |
ACCACATCACGTGTCAGACT+TGG | + | tig0015809:51777-51796 | Msa1356600:CDS | 50.0% | |
! | TGACGGTTGATGCACGAACA+GGG | - | tig0015809:51824-51843 | None:intergenic | 50.0% |
! | TTGACGGTTGATGCACGAAC+AGG | - | tig0015809:51825-51844 | None:intergenic | 50.0% |
AATGCCTTCACAACAGCTGC+AGG | - | tig0015809:51981-52000 | None:intergenic | 50.0% | |
ATACCAGGAGGAGACATTGG+GGG | + | tig0015809:52512-52531 | Msa1356600:intron | 50.0% | |
GGGGGTTCTCTTTAATCACC+CGG | + | tig0015809:52530-52549 | Msa1356600:intron | 50.0% | |
GATATTGCACACTGGGCACA+TGG | + | tig0015809:53384-53403 | Msa1356600:CDS | 50.0% | |
TATTGCACACTGGGCACATG+GGG | + | tig0015809:53386-53405 | Msa1356600:CDS | 50.0% | |
TTACAGATGTGTGGGCCTAC+AGG | + | tig0015809:53585-53604 | Msa1356600:intron | 50.0% | |
! | CTTTTGCTTGTTTCAGGCGG+TGG | + | tig0015809:53818-53837 | Msa1356600:intron | 50.0% |
AAGTTCACAAACCTGGACGG+AGG | - | tig0015809:53890-53909 | None:intergenic | 50.0% | |
CGTTTCTCCTTCACTTCCTC+TGG | + | tig0015809:54058-54077 | Msa1356600:intron | 50.0% | |
TCAAGAGCCAGAGGAAGTGA+AGG | - | tig0015809:54068-54087 | None:intergenic | 50.0% | |
TCTTGGGACTGATACTCTGG+TGG | + | tig0015809:54207-54226 | Msa1356600:intron | 50.0% | |
CATGCAGTTGAGTCACTTCC+AGG | + | tig0015809:54863-54882 | Msa1356600:intron | 50.0% | |
!! | TTTGGCTCTCGGATATGTCC+TGG | - | tig0015809:54884-54903 | None:intergenic | 50.0% |
! | CATTGAAGGGCACAGAGACT+AGG | - | tig0015809:55389-55408 | None:intergenic | 50.0% |
! | GGGACCCATTTTCAAAGTGC+TGG | + | tig0015809:55617-55636 | Msa1356600:intron | 50.0% |
TTGACTTCTTTCGAAGGGGC+TGG | - | tig0015809:55868-55887 | None:intergenic | 50.0% | |
CATGGAGTGGCAATCAGATC+AGG | + | tig0015809:56371-56390 | Msa1356600:CDS | 50.0% | |
CTAAATACCGATGGAGGGGT+TGG | - | tig0015809:56409-56428 | None:intergenic | 50.0% | |
CAACCCCTCCATCGGTATTT+AGG | + | tig0015809:56407-56426 | Msa1356600:CDS | 50.0% | |
ACCCCTCCATCGGTATTTAG+GGG | + | tig0015809:56409-56428 | Msa1356600:CDS | 50.0% | |
ACCCCTAAATACCGATGGAG+GGG | - | tig0015809:56413-56432 | None:intergenic | 50.0% | |
GACCCCTAAATACCGATGGA+GGG | - | tig0015809:56414-56433 | None:intergenic | 50.0% | |
TGACCCCTAAATACCGATGG+AGG | - | tig0015809:56415-56434 | None:intergenic | 50.0% | |
! | TCCATCGCCATTGGTTGGGT+TGG | + | tig0015809:51239-51258 | Msa1356600:five_prime_UTR | 55.0% |
! | CCATCGCCATTGGTTGGGTT+GGG | + | tig0015809:51240-51259 | Msa1356600:five_prime_UTR | 55.0% |
AGCTTAGTGGAGAACAGCGG+CGG | - | tig0015809:51376-51395 | None:intergenic | 55.0% | |
GCCAAGTCTGACACGTGATG+TGG | - | tig0015809:51781-51800 | None:intergenic | 55.0% | |
! | CTGGTAGTGTGGCCCAAAGA+GGG | - | tig0015809:51879-51898 | None:intergenic | 55.0% |
! | TCTGGTAGTGTGGCCCAAAG+AGG | - | tig0015809:51880-51899 | None:intergenic | 55.0% |
! | GGAAATGGGGTCTGGTAGTG+TGG | - | tig0015809:51890-51909 | None:intergenic | 55.0% |
GAAGCCTGCAGCTGTTGTGA+AGG | + | tig0015809:51974-51993 | Msa1356600:CDS | 55.0% | |
CATGTGTGGAACACTCTGGC+AGG | - | tig0015809:53436-53455 | None:intergenic | 55.0% | |
! | CTGCCAGAGTGTTCCACACA+TGG | + | tig0015809:53434-53453 | Msa1356600:CDS | 55.0% |
CCACCATGTGTGGAACACTC+TGG | - | tig0015809:53440-53459 | None:intergenic | 55.0% | |
! | CCAGAGTGTTCCACACATGG+TGG | + | tig0015809:53437-53456 | Msa1356600:CDS | 55.0% |
GGCCCACACATCTGTAAGAC+AGG | - | tig0015809:53582-53601 | None:intergenic | 55.0% | |
ATGTGTGGGCCTACAGGCAT+TGG | + | tig0015809:53591-53610 | Msa1356600:CDS | 55.0% | |
! | ATGGAGGCATGGAAGACAGG+AGG | - | tig0015809:53638-53657 | None:intergenic | 55.0% |
CACAAACCTGGACGGAGGTT+CGG | - | tig0015809:53885-53904 | None:intergenic | 55.0% | |
GAGGCTGGAACACCAGCTAT+TGG | + | tig0015809:54388-54407 | Msa1356600:CDS | 55.0% | |
!! | ACCACAGGGTGTTTGGCTCT+CGG | - | tig0015809:54895-54914 | None:intergenic | 55.0% |
ATTGTGCCCAACCCCTCCAT+CGG | + | tig0015809:56399-56418 | Msa1356600:CDS | 55.0% | |
TGACCGTGTCATGAAGGGCA+TGG | - | tig0015809:56499-56518 | None:intergenic | 55.0% | |
CCCAACCCAACCAATGGCGA+TGG | - | tig0015809:51243-51262 | None:intergenic | 60.0% | |
GAACCCCCAATGTCTCCTCC+TGG | - | tig0015809:52518-52537 | None:intergenic | 60.0% | |
CTTATGCCGAACCTCCGTCC+AGG | + | tig0015809:53876-53895 | Msa1356600:CDS | 60.0% | |
!! | TTGGCTTGGGTGGAGGTCAC+AGG | + | tig0015809:53955-53974 | Msa1356600:intron | 60.0% |
TCCGAGAGCCAAACACCCTG+TGG | + | tig0015809:54891-54910 | Msa1356600:intron | 60.0% | |
GATGGAGGGGTTGGGCACAA+TGG | - | tig0015809:56400-56419 | None:intergenic | 60.0% | |
GCACACTGGGCACATGGGGT+TGG | + | tig0015809:53390-53409 | Msa1356600:CDS | 65.0% | |
GTGGAGAACAGCGGCGGCGA+GGG | - | tig0015809:51370-51389 | None:intergenic | 70.0% | |
AGTGGAGAACAGCGGCGGCG+AGG | - | tig0015809:51371-51390 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0015809 | gene | 51102 | 56861 | 51102 | ID=Msa1356600;Name=Msa1356600 |
tig0015809 | mRNA | 51102 | 56861 | 51102 | ID=Msa1356600-mRNA-1;Parent=Msa1356600;Name=Msa1356600-mRNA-1;_AED=0.22;_eAED=0.22;_QI=387|1|1|1|0.88|0.8|10|320|466 |
tig0015809 | exon | 51102 | 51423 | 51102 | ID=Msa1356600-mRNA-1:exon:9998;Parent=Msa1356600-mRNA-1 |
tig0015809 | exon | 51652 | 52057 | 51652 | ID=Msa1356600-mRNA-1:exon:9999;Parent=Msa1356600-mRNA-1 |
tig0015809 | exon | 52145 | 52304 | 52145 | ID=Msa1356600-mRNA-1:exon:10000;Parent=Msa1356600-mRNA-1 |
tig0015809 | exon | 52640 | 52826 | 52640 | ID=Msa1356600-mRNA-1:exon:10001;Parent=Msa1356600-mRNA-1 |
tig0015809 | exon | 53364 | 53509 | 53364 | ID=Msa1356600-mRNA-1:exon:10002;Parent=Msa1356600-mRNA-1 |
tig0015809 | exon | 53591 | 53663 | 53591 | ID=Msa1356600-mRNA-1:exon:10003;Parent=Msa1356600-mRNA-1 |
tig0015809 | exon | 53834 | 53897 | 53834 | ID=Msa1356600-mRNA-1:exon:10004;Parent=Msa1356600-mRNA-1 |
tig0015809 | exon | 54384 | 54483 | 54384 | ID=Msa1356600-mRNA-1:exon:10005;Parent=Msa1356600-mRNA-1 |
tig0015809 | exon | 55802 | 55960 | 55802 | ID=Msa1356600-mRNA-1:exon:10006;Parent=Msa1356600-mRNA-1 |
tig0015809 | exon | 56371 | 56861 | 56371 | ID=Msa1356600-mRNA-1:exon:10007;Parent=Msa1356600-mRNA-1 |
tig0015809 | five_prime_UTR | 51102 | 51423 | 51102 | ID=Msa1356600-mRNA-1:five_prime_utr;Parent=Msa1356600-mRNA-1 |
tig0015809 | five_prime_UTR | 51652 | 51716 | 51652 | ID=Msa1356600-mRNA-1:five_prime_utr;Parent=Msa1356600-mRNA-1 |
tig0015809 | CDS | 51717 | 52057 | 51717 | ID=Msa1356600-mRNA-1:cds;Parent=Msa1356600-mRNA-1 |
tig0015809 | CDS | 52145 | 52304 | 52145 | ID=Msa1356600-mRNA-1:cds;Parent=Msa1356600-mRNA-1 |
tig0015809 | CDS | 52640 | 52826 | 52640 | ID=Msa1356600-mRNA-1:cds;Parent=Msa1356600-mRNA-1 |
tig0015809 | CDS | 53364 | 53509 | 53364 | ID=Msa1356600-mRNA-1:cds;Parent=Msa1356600-mRNA-1 |
tig0015809 | CDS | 53591 | 53663 | 53591 | ID=Msa1356600-mRNA-1:cds;Parent=Msa1356600-mRNA-1 |
tig0015809 | CDS | 53834 | 53897 | 53834 | ID=Msa1356600-mRNA-1:cds;Parent=Msa1356600-mRNA-1 |
tig0015809 | CDS | 54384 | 54483 | 54384 | ID=Msa1356600-mRNA-1:cds;Parent=Msa1356600-mRNA-1 |
tig0015809 | CDS | 55802 | 55960 | 55802 | ID=Msa1356600-mRNA-1:cds;Parent=Msa1356600-mRNA-1 |
tig0015809 | CDS | 56371 | 56541 | 56371 | ID=Msa1356600-mRNA-1:cds;Parent=Msa1356600-mRNA-1 |
tig0015809 | three_prime_UTR | 56542 | 56861 | 56542 | ID=Msa1356600-mRNA-1:three_prime_utr;Parent=Msa1356600-mRNA-1 |
Gene Sequence |
Protein sequence |