Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0743810 | Msa1285540 | 0.807093 | 5.981363e-50 | -8.615850e-47 |
| Msa0784290 | Msa1285540 | 0.806385 | 8.439044e-50 | -8.615850e-47 |
| Msa0784300 | Msa1285540 | 0.801447 | 8.963693e-49 | -8.615850e-47 |
| Msa0808010 | Msa1285540 | 0.807819 | 4.196190e-50 | -8.615850e-47 |
| Msa0808020 | Msa1285540 | 0.814482 | 1.506793e-51 | -8.615850e-47 |
| Msa0825860 | Msa1285540 | 0.804731 | 1.876627e-49 | -8.615850e-47 |
| Msa0142220 | Msa1285540 | 0.812120 | 4.974155e-51 | -8.615850e-47 |
| Msa1248310 | Msa1285540 | 0.812661 | 3.789186e-51 | -8.615850e-47 |
| Msa1270230 | Msa1285540 | 0.810677 | 1.023689e-50 | -8.615850e-47 |
| Msa1283330 | Msa1285540 | 0.811542 | 6.646192e-51 | -8.615850e-47 |
| Msa1285540 | Msa1287810 | 0.809221 | 2.106661e-50 | -8.615850e-47 |
| Msa1285540 | Msa1344520 | 0.803333 | 3.665682e-49 | -8.615850e-47 |
| Msa1285540 | Msa1404000 | 0.812489 | 4.131346e-51 | -8.615850e-47 |
| Msa1285540 | Msa1433120 | 0.815435 | 9.256666e-52 | -8.615850e-47 |
| Msa0452900 | Msa1285540 | 0.823662 | 1.227782e-53 | -8.615850e-47 |
| Msa1016280 | Msa1285540 | 0.804701 | 1.904064e-49 | -8.615850e-47 |
| Msa1025360 | Msa1285540 | 0.822150 | 2.763321e-53 | -8.615850e-47 |
| Msa1025370 | Msa1285540 | 0.819591 | 1.071482e-52 | -8.615850e-47 |
| Msa1044830 | Msa1285540 | 0.821771 | 3.382708e-53 | -8.615850e-47 |
| Msa1044840 | Msa1285540 | 0.819107 | 1.381460e-52 | -8.615850e-47 |
| Msa1100980 | Msa1285540 | 0.807964 | 3.907461e-50 | -8.615850e-47 |
| Msa0267000 | Msa1285540 | 0.813509 | 2.469209e-51 | -8.615850e-47 |
| Msa0267010 | Msa1285540 | 0.810393 | 1.178446e-50 | -8.615850e-47 |
| Msa0362420 | Msa1285540 | 0.815394 | 9.453344e-52 | -8.615850e-47 |
| Msa1146110 | Msa1285540 | 0.814895 | 1.220232e-51 | -8.615850e-47 |
| Msa0848960 | Msa1285540 | 0.804144 | 2.486879e-49 | -8.615850e-47 |
| Msa0858980 | Msa1285540 | 0.824501 | 7.799885e-54 | -8.615850e-47 |
| Msa0899430 | Msa1285540 | 0.804416 | 2.182850e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 72 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTTCTTGAAGAAGAAAA+AGG | 0.247818 | 8_3:-30359256 | Msa1285540:CDS |
| AGGATTTGTGTATCCCTCTT+AGG | 0.275160 | 8_3:-30359439 | Msa1285540:CDS |
| AAGGAGATCGCAGTGGCTTT+TGG | 0.276507 | 8_3:-30355770 | Msa1285540:CDS |
| AAGTGGGACGTCGACGAAAA+TGG | 0.304195 | 8_3:+30361109 | None:intergenic |
| TTGCATACTCATTCAAAGTT+GGG | 0.379805 | 8_3:-30354551 | Msa1285540:CDS |
| AAAGTTGGGGCTTGATGCCC+TGG | 0.383813 | 8_3:-30354537 | Msa1285540:CDS |
| ACTGTGTTTGTACGAACAAT+GGG | 0.405702 | 8_3:-30359201 | Msa1285540:CDS |
| TGTGAATGACTAAGCATTCC+AGG | 0.406072 | 8_3:+30354475 | None:intergenic |
| TGTGAATGACTAAGCATTCC+AGG | 0.406072 | 8_3:+30354519 | None:intergenic |
| AAGAATTCTGAGTTCCTAAG+AGG | 0.425605 | 8_3:+30359425 | None:intergenic |
| TTGCCGAATCTCTCCGTTGA+AGG | 0.434590 | 8_3:+30355830 | None:intergenic |
| GATTGTGAGGCGACGGTGGC+TGG | 0.437589 | 8_3:+30361073 | None:intergenic |
| ATTGCATACTCATTCAAAGT+TGG | 0.440628 | 8_3:-30354552 | Msa1285540:CDS |
| GAAGGTGGATAAAACGGAAC+AGG | 0.446506 | 8_3:+30361154 | None:intergenic |
| TTGGTGAGGGCTTGATGCCC+TGG | 0.453072 | 8_3:-30354493 | Msa1285540:CDS |
| ATCCATGGCATTGTTCTAAG+AGG | 0.456559 | 8_3:+30359373 | None:intergenic |
| AAATCGAATATCTTTGTTGA+AGG | 0.465014 | 8_3:-30360940 | Msa1285540:intron |
| TCACCTTCAACGGAGAGATT+CGG | 0.469721 | 8_3:-30355833 | Msa1285540:CDS |
| AGAGAACTGATGTTGAAATT+CGG | 0.473828 | 8_3:-30360555 | Msa1285540:exon |
| TTGAATCTTGTATTTGGTGA+AGG | 0.477829 | 8_3:+30355864 | None:intergenic |
| TGCTTAGTCATTCACACGAT+TGG | 0.479881 | 8_3:-30354512 | Msa1285540:CDS |
| GGATCGTATTTGTTGGAGGA+AGG | 0.480199 | 8_3:-30355749 | Msa1285540:CDS |
| AGGGATACACAAACAAATCA+TGG | 0.491580 | 8_3:+30359393 | None:intergenic |
| TCGTTACAGCCTACGTGCCT+TGG | 0.499914 | 8_3:-30360493 | Msa1285540:CDS |
| AATTCGGTGCCCTCTCCGCC+AGG | 0.502342 | 8_3:-30360539 | Msa1285540:CDS |
| TCCGACGAAGGTGGATAAAA+CGG | 0.503144 | 8_3:+30361148 | None:intergenic |
| ACGGTGAGAGTGAGGGATCA+AGG | 0.515014 | 8_3:+30361015 | None:intergenic |
| TGCATACTCATTCAAAGTTG+GGG | 0.521037 | 8_3:-30354550 | Msa1285540:CDS |
| GTCATTCACACGATTGGTGA+GGG | 0.525310 | 8_3:-30354506 | Msa1285540:CDS |
| GTTGGAGGAAGGAGATCGAG+AGG | 0.540662 | 8_3:-30355738 | Msa1285540:intron |
| AAGACTTCTGGTCAAGGACA+AGG | 0.542952 | 8_3:-30355350 | Msa1285540:CDS |
| GTCACGCGACGGCGAATCCA+AGG | 0.549305 | 8_3:+30360476 | None:intergenic |
| TGTACGAACAATGGGGATGA+AGG | 0.551846 | 8_3:-30359193 | Msa1285540:CDS |
| TGATCCCTCACTCTCACCGT+TGG | 0.552967 | 8_3:-30361012 | Msa1285540:five_prime_UTR |
| TTCATCACACCTGGCGGAGA+GGG | 0.553490 | 8_3:+30360530 | None:intergenic |
| CTTAGAACAATGCCATGGAT+TGG | 0.556432 | 8_3:-30359370 | Msa1285540:CDS |
| AACTTTGAATGAGTATGCAA+TGG | 0.562408 | 8_3:+30354554 | None:intergenic |
| AGATTCAGATTCATCACACC+TGG | 0.567800 | 8_3:+30360521 | None:intergenic |
| TACTGTGTTTGTACGAACAA+TGG | 0.577699 | 8_3:-30359202 | Msa1285540:CDS |
| TGTTTCCAACGGTGAGAGTG+AGG | 0.582953 | 8_3:+30361007 | None:intergenic |
| TGAAATCTTCTCTCCGACGA+AGG | 0.587439 | 8_3:+30361136 | None:intergenic |
| AGAATTCTGAGTTCCTAAGA+GGG | 0.592460 | 8_3:+30359426 | None:intergenic |
| TCCATGGCATTGTTCTAAGA+GGG | 0.598515 | 8_3:+30359374 | None:intergenic |
| CACACAAAATCACCAATCCA+TGG | 0.602499 | 8_3:+30359358 | None:intergenic |
| AATCTTCTCTCCGACGAAGG+TGG | 0.603824 | 8_3:+30361139 | None:intergenic |
| CTGGAATGAGACAGATCAAG+TGG | 0.604046 | 8_3:+30361092 | None:intergenic |
| CTTAGTCACAATTCAGCCGT+CGG | 0.609510 | 8_3:-30360983 | Msa1285540:five_prime_UTR |
| AGTCATTCACACGATTGGTG+AGG | 0.610724 | 8_3:-30354507 | Msa1285540:CDS |
| CGTCGCGTGACTCTCATCGT+TGG | 0.620121 | 8_3:-30360464 | Msa1285540:intron |
| TCCCTCTTAGAACAATGCCA+TGG | 0.622285 | 8_3:-30359375 | Msa1285540:CDS |
| TGGGACGTCGACGAAAATGG+TGG | 0.623020 | 8_3:+30361112 | None:intergenic |
| GTACGAACAATGGGGATGAA+GGG | 0.623308 | 8_3:-30359192 | Msa1285540:intron |
| CAGTGATTGTGAGGCGACGG+TGG | 0.624540 | 8_3:+30361069 | None:intergenic |
| GTTTCCAACGGTGAGAGTGA+GGG | 0.625319 | 8_3:+30361008 | None:intergenic |
| ATGACGCAACAGTGATTGTG+AGG | 0.630200 | 8_3:+30361060 | None:intergenic |
| ATTCATCACACCTGGCGGAG+AGG | 0.634029 | 8_3:+30360529 | None:intergenic |
| GTGAATGACTAAGCATTCCA+GGG | 0.638468 | 8_3:+30354476 | None:intergenic |
| GTGAATGACTAAGCATTCCA+GGG | 0.638468 | 8_3:+30354520 | None:intergenic |
| CAACAGTGATTGTGAGGCGA+CGG | 0.639124 | 8_3:+30361066 | None:intergenic |
| TGTGACTAAGATGTTTCCAA+CGG | 0.648870 | 8_3:+30360996 | None:intergenic |
| AGTAACTGTTGAATCGCGGA+AGG | 0.650141 | 8_3:-30355789 | Msa1285540:CDS |
| AAGGTGGATAAAACGGAACA+GGG | 0.666087 | 8_3:+30361155 | None:intergenic |
| TTCAGATTCATCACACCTGG+CGG | 0.669870 | 8_3:+30360524 | None:intergenic |
| CGAAAAGATTGAGTAACCGA+CGG | 0.692455 | 8_3:+30360967 | None:intergenic |
| TGGAATGAGACAGATCAAGT+GGG | 0.695410 | 8_3:+30361093 | None:intergenic |
| CAACGATGAGAGTCACGCGA+CGG | 0.699697 | 8_3:+30360465 | None:intergenic |
| AAACAGTAACTGTTGAATCG+CGG | 0.701260 | 8_3:-30355793 | Msa1285540:CDS |
| ACGGCGAATCCAAGGCACGT+AGG | 0.722004 | 8_3:+30360484 | None:intergenic |
| GTGAGAGTGAGGGATCAAGG+AGG | 0.736055 | 8_3:+30361018 | None:intergenic |
| ATCGCGGAAGGAGATCGCAG+TGG | 0.751325 | 8_3:-30355777 | Msa1285540:CDS |
| CTGTGTTTGTACGAACAATG+GGG | 0.773596 | 8_3:-30359200 | Msa1285540:CDS |
| AGGTGGATAAAACGGAACAG+GGG | 0.779375 | 8_3:+30361156 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGGTAATAAAAATAAAATA+TGG | + | chr8_3:30357039-30357058 | None:intergenic | 10.0% |
| !! | AGTAAAAAAAACATAATAAA+CGG | - | chr8_3:30357951-30357970 | Msa1285540:intron | 10.0% |
| !!! | TGAAGAAATTAAAATTTTAA+GGG | + | chr8_3:30359119-30359138 | None:intergenic | 10.0% |
| !!! | AATTTATTTTGAAATCATTT+GGG | + | chr8_3:30359768-30359787 | None:intergenic | 10.0% |
| !!! | AAATTTATTTTGAAATCATT+TGG | + | chr8_3:30359769-30359788 | None:intergenic | 10.0% |
| !!! | TTTTAAATTTGTTTGGATAT+TGG | - | chr8_3:30354927-30354946 | Msa1285540:intron | 15.0% |
| !!! | AAAATTGTTTTTCAATATCT+TGG | - | chr8_3:30355312-30355331 | Msa1285540:intron | 15.0% |
| !! | AAAATTTATACATGTGATAT+TGG | - | chr8_3:30355621-30355640 | Msa1285540:intron | 15.0% |
| !!! | AATTAACCAGTTTTAAAAAA+AGG | - | chr8_3:30356808-30356827 | Msa1285540:intron | 15.0% |
| !!! | TGATTTTTGACTAATAATAA+AGG | - | chr8_3:30356924-30356943 | Msa1285540:intron | 15.0% |
| !!! | GATTTTTGACTAATAATAAA+GGG | - | chr8_3:30356925-30356944 | Msa1285540:intron | 15.0% |
| !!! | ATATAACCATAATTTTACAA+AGG | - | chr8_3:30357228-30357247 | Msa1285540:intron | 15.0% |
| !! | AACATGTATTCAATTAAAAA+TGG | - | chr8_3:30358118-30358137 | Msa1285540:intron | 15.0% |
| !! | AATAAAAATTACAGTACAAT+TGG | - | chr8_3:30358215-30358234 | Msa1285540:intron | 15.0% |
| !!! | AATTTTTTTGTATCATTTTC+TGG | + | chr8_3:30358578-30358597 | None:intergenic | 15.0% |
| !!! | GTGAAGAAATTAAAATTTTA+AGG | + | chr8_3:30359120-30359139 | None:intergenic | 15.0% |
| !! | TGAAGAAATTAATCATATTA+GGG | + | chr8_3:30359740-30359759 | None:intergenic | 15.0% |
| !! | ATGAAGAAATTAATCATATT+AGG | + | chr8_3:30359741-30359760 | None:intergenic | 15.0% |
| !! | AGTTGTTAAAAAAATAGTTA+TGG | + | chr8_3:30360522-30360541 | None:intergenic | 15.0% |
| !! | AAAGTTTATTTAAACTTTGA+AGG | - | chr8_3:30360646-30360665 | Msa1285540:intron | 15.0% |
| !! | TTTGGATAACAAAATTAGTT+TGG | - | chr8_3:30354836-30354855 | Msa1285540:intron | 20.0% |
| !!! | AACAAAATTAGTTTGGATAT+TGG | - | chr8_3:30354843-30354862 | Msa1285540:intron | 20.0% |
| !!! | CTCTGATTTTTAAATTTGTT+TGG | - | chr8_3:30354920-30354939 | Msa1285540:intron | 20.0% |
| !! | CAAATTTCAAAATCAAAATG+TGG | + | chr8_3:30355004-30355023 | None:intergenic | 20.0% |
| !! | AGAAAATTTAAGTATTTACC+AGG | + | chr8_3:30355048-30355067 | None:intergenic | 20.0% |
| !! | ATGTTGTTAATTATTTCGAA+AGG | - | chr8_3:30355071-30355090 | Msa1285540:intron | 20.0% |
| !! | TGTTGTTAATTATTTCGAAA+GGG | - | chr8_3:30355072-30355091 | Msa1285540:intron | 20.0% |
| !! | ATGTAATAATAAGTCAAAAG+TGG | - | chr8_3:30355679-30355698 | Msa1285540:intron | 20.0% |
| !! | TGTAATAATAAGTCAAAAGT+GGG | - | chr8_3:30355680-30355699 | Msa1285540:intron | 20.0% |
| !!! | ATGTTTTTGACATGAAAATA+TGG | - | chr8_3:30355713-30355732 | Msa1285540:intron | 20.0% |
| !!! | GTTTATTGTTATTTCCTAAA+CGG | - | chr8_3:30356004-30356023 | Msa1285540:intron | 20.0% |
| !! | GCTAGCATATTAAAATATAA+AGG | - | chr8_3:30356180-30356199 | Msa1285540:intron | 20.0% |
| !! | GCATATTAAAATATAAAGGA+TGG | - | chr8_3:30356184-30356203 | Msa1285540:intron | 20.0% |
| !! | AAATTTCTTGAAGAAGAAAA+AGG | - | chr8_3:30356400-30356419 | Msa1285540:intron | 20.0% |
| !! | AATTTCTTGAAGAAGAAAAA+GGG | - | chr8_3:30356401-30356420 | Msa1285540:intron | 20.0% |
| !! | TTAGTGAAAGGAATATATTA+TGG | - | chr8_3:30357092-30357111 | Msa1285540:intron | 20.0% |
| !!! | ATATAACCACAATTTTACAA+TGG | - | chr8_3:30357427-30357446 | Msa1285540:intron | 20.0% |
| !!! | AATTTTCACAAGATATTTCT+AGG | - | chr8_3:30357598-30357617 | Msa1285540:intron | 20.0% |
| !!! | TTTTTCTTGAATCTTGTATT+TGG | + | chr8_3:30359801-30359820 | None:intergenic | 20.0% |
| !! | TCAGTAAATAAATGTTCTAT+GGG | - | chr8_3:30360367-30360386 | Msa1285540:intron | 20.0% |
| !! | AAAAATAATCGAGAGAAAAA+TGG | - | chr8_3:30360577-30360596 | Msa1285540:intron | 20.0% |
| !! | ACTTTACTTAATTATGGTTA+TGG | - | chr8_3:30360731-30360750 | Msa1285540:intron | 20.0% |
| ! | AAATCGAATATCTTTGTTGA+AGG | - | chr8_3:30354716-30354735 | Msa1285540:intron | 25.0% |
| !! | TGAAGTTTGTTCTCAAAAAA+TGG | - | chr8_3:30354805-30354824 | Msa1285540:intron | 25.0% |
| !! | GAAGTTTGTTCTCAAAAAAT+GGG | - | chr8_3:30354806-30354825 | Msa1285540:intron | 25.0% |
| ! | AAACATGGTTATGTGATTAT+AGG | - | chr8_3:30354951-30354970 | Msa1285540:intron | 25.0% |
| ! | ATTTAAGTATTTACCAGGTT+TGG | + | chr8_3:30355043-30355062 | None:intergenic | 25.0% |
| ! | TGCTTAACTATCTTAATCAA+TGG | - | chr8_3:30355245-30355264 | Msa1285540:intron | 25.0% |
| !!! | TTTTTCAATATCTTGGTTGA+GGG | - | chr8_3:30355319-30355338 | Msa1285540:intron | 25.0% |
| ! | CATTTAGTGTTAACCAATTT+CGG | + | chr8_3:30355384-30355403 | None:intergenic | 25.0% |
| ! | GTTAACACTAAATGTAGTTT+AGG | - | chr8_3:30355390-30355409 | Msa1285540:intron | 25.0% |
| !!! | TAGCTTTGAATTAGTTATGA+TGG | - | chr8_3:30355439-30355458 | Msa1285540:intron | 25.0% |
| !!! | TTAGTTATGATGGATTTAGA+TGG | - | chr8_3:30355449-30355468 | Msa1285540:intron | 25.0% |
| ! | AATCCAATCTATGTATGATT+AGG | - | chr8_3:30355589-30355608 | Msa1285540:intron | 25.0% |
| ! | TATCCTAATCATACATAGAT+TGG | + | chr8_3:30355595-30355614 | None:intergenic | 25.0% |
| ! | ATTTATACATGTGATATTGG+AGG | - | chr8_3:30355624-30355643 | Msa1285540:intron | 25.0% |
| ! | TTTATACATGTGATATTGGA+GGG | - | chr8_3:30355625-30355644 | Msa1285540:intron | 25.0% |
| ! | TGAAAATATGGTTGAAATAG+AGG | - | chr8_3:30355725-30355744 | Msa1285540:intron | 25.0% |
| ! | TTATGTGTATAAACTAGTTG+AGG | - | chr8_3:30355757-30355776 | Msa1285540:CDS | 25.0% |
| !!! | TCAATGACTTGTAGAAATTT+TGG | - | chr8_3:30355954-30355973 | Msa1285540:intron | 25.0% |
| !! | AAATTTTGGACAAATGCATA+AGG | - | chr8_3:30355968-30355987 | Msa1285540:intron | 25.0% |
| !!! | TAAAGGATGGATATTTTTGT+AGG | - | chr8_3:30356197-30356216 | Msa1285540:intron | 25.0% |
| !! | AGTGATGTGATCTATTTTAT+AGG | - | chr8_3:30356514-30356533 | Msa1285540:intron | 25.0% |
| ! | ATGCTATAAGTACTAAATGT+GGG | + | chr8_3:30356725-30356744 | None:intergenic | 25.0% |
| !!! | GTTACACCTTTTTTTAAAAC+TGG | + | chr8_3:30356817-30356836 | None:intergenic | 25.0% |
| ! | CTCGTAATGAAAATAAATTG+TGG | + | chr8_3:30356839-30356858 | None:intergenic | 25.0% |
| ! | TTCAGTTAAAGGGATATATT+TGG | - | chr8_3:30356891-30356910 | Msa1285540:intron | 25.0% |
| !! | GCTACACATTTGTTAAAATA+TGG | + | chr8_3:30357017-30357036 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTTGACAGAATTT+AGG | - | chr8_3:30357163-30357182 | Msa1285540:intron | 25.0% |
| ! | GTTACATTCAACTAAAACTA+TGG | + | chr8_3:30357194-30357213 | None:intergenic | 25.0% |
| ! | GGTTATATGCTTCAATTATT+TGG | + | chr8_3:30357216-30357235 | None:intergenic | 25.0% |
| ! | GTTACACCTTTGTAAAATTA+TGG | + | chr8_3:30357237-30357256 | None:intergenic | 25.0% |
| ! | TTTAACGTAGGATAAAAAGA+TGG | + | chr8_3:30357259-30357278 | None:intergenic | 25.0% |
| !!! | TTAGTTTGATATTTTGAGGT+TGG | + | chr8_3:30357302-30357321 | None:intergenic | 25.0% |
| ! | CTAGTATTTACATGATAAGT+TGG | - | chr8_3:30357350-30357369 | Msa1285540:intron | 25.0% |
| !! | TAAAACGATATAGTTTTCAC+AGG | - | chr8_3:30357375-30357394 | Msa1285540:intron | 25.0% |
| ! | GGTTATATGCTTCAATTATT+TGG | + | chr8_3:30357216-30357235 | None:intergenic | 25.0% |
| !! | TTAATTTTCTGTTGTAAGGT+TGG | + | chr8_3:30357500-30357519 | None:intergenic | 25.0% |
| !! | TCTGTTAATTTTCTGTTGTA+AGG | + | chr8_3:30357504-30357523 | None:intergenic | 25.0% |
| ! | TGACTACATTGTATGTTTAT+TGG | + | chr8_3:30357535-30357554 | None:intergenic | 25.0% |
| !! | ACATAACCACAATTTTACAA+AGG | - | chr8_3:30357639-30357658 | Msa1285540:intron | 25.0% |
| ! | GTTATACCTTTGTAAAATTG+TGG | + | chr8_3:30357648-30357667 | None:intergenic | 25.0% |
| !! | TTAATTTTCTGTTATGAGGT+CGG | + | chr8_3:30357714-30357733 | None:intergenic | 25.0% |
| ! | ACCTCATAACAGAAAATTAA+TGG | - | chr8_3:30357714-30357733 | Msa1285540:intron | 25.0% |
| !! | TCCATTAATTTTCTGTTATG+AGG | + | chr8_3:30357718-30357737 | None:intergenic | 25.0% |
| !! | ATAAGCTGACTTAAATGATA+TGG | - | chr8_3:30357786-30357805 | Msa1285540:intron | 25.0% |
| ! | GGATATATGCTTCAATTATT+TGG | + | chr8_3:30357836-30357855 | None:intergenic | 25.0% |
| ! | GTTTACTCTTTGTAAAATTG+TGG | + | chr8_3:30357857-30357876 | None:intergenic | 25.0% |
| ! | TTTGAACACAGGAAAAAATA+TGG | + | chr8_3:30357879-30357898 | None:intergenic | 25.0% |
| !! | TTAATTTTATGTTGTGAGGT+TGG | + | chr8_3:30357922-30357941 | None:intergenic | 25.0% |
| ! | ACCTCACAACATAAAATTAA+TGG | - | chr8_3:30357922-30357941 | Msa1285540:intron | 25.0% |
| !! | TCCATTAATTTTATGTTGTG+AGG | + | chr8_3:30357926-30357945 | None:intergenic | 25.0% |
| !!! | TAAGATTCAATTGCTGATTT+TGG | - | chr8_3:30358520-30358539 | Msa1285540:intron | 25.0% |
| ! | TACAAAAAAATTGAGCTGAT+AGG | - | chr8_3:30358586-30358605 | Msa1285540:intron | 25.0% |
| !!! | GTCTTTTTTATCAACTAATC+AGG | - | chr8_3:30358611-30358630 | Msa1285540:intron | 25.0% |
| ! | GGTTATACTCTTCAAAAATT+TGG | + | chr8_3:30358740-30358759 | None:intergenic | 25.0% |
| ! | GTATAACCAAAATTTCACAA+AGG | - | chr8_3:30358752-30358771 | Msa1285540:intron | 25.0% |
| !!! | TTAGTTTTCTGTTATGAGTA+TGG | + | chr8_3:30358827-30358846 | None:intergenic | 25.0% |
| ! | AATGATAAATTGCCATAGAA+TGG | - | chr8_3:30358895-30358914 | Msa1285540:intron | 25.0% |
| !!! | TGTCTTTCTGTTTTGTTATT+TGG | + | chr8_3:30359035-30359054 | None:intergenic | 25.0% |
| !!! | AAATTAAAATTTTAAGGGCG+AGG | + | chr8_3:30359114-30359133 | None:intergenic | 25.0% |
| ! | ACTATGCATATAAAAATGAG+AGG | - | chr8_3:30359432-30359451 | Msa1285540:CDS | 25.0% |
| ! | AGGTGAATGTTATTCTATAT+AGG | - | chr8_3:30359452-30359471 | Msa1285540:intron | 25.0% |
| !!! | ATTTGTTGGTAATTGCAAAT+GGG | + | chr8_3:30359542-30359561 | None:intergenic | 25.0% |
| !!! | ACTGATTTAGTGAGAATTTT+GGG | + | chr8_3:30359711-30359730 | None:intergenic | 25.0% |
| !!! | TACTGATTTAGTGAGAATTT+TGG | + | chr8_3:30359712-30359731 | None:intergenic | 25.0% |
| !! | AAAATTGATCTTTGATGACA+TGG | + | chr8_3:30360125-30360144 | None:intergenic | 25.0% |
| ! | GTCAGTAAATAAATGTTCTA+TGG | - | chr8_3:30360366-30360385 | Msa1285540:intron | 25.0% |
| !! | ATTTTTGTTCGAACAAAACA+AGG | + | chr8_3:30360563-30360582 | None:intergenic | 25.0% |
| ! | ACATTCGTGAATATAAGAAA+TGG | - | chr8_3:30360615-30360634 | Msa1285540:intron | 25.0% |
| ! | AACAATACATTCATCCATAT+AGG | - | chr8_3:30360686-30360705 | Msa1285540:intron | 25.0% |
| ! | TAGCGTACTTTACTTAATTA+TGG | - | chr8_3:30360725-30360744 | Msa1285540:intron | 25.0% |
| TACAAAGTCTCAACACAAAA+TGG | + | chr8_3:30354767-30354786 | None:intergenic | 30.0% | |
| TGTGTTGAGACTTTGTATTT+AGG | - | chr8_3:30354770-30354789 | Msa1285540:intron | 30.0% | |
| GTGTTGAGACTTTGTATTTA+GGG | - | chr8_3:30354771-30354790 | Msa1285540:intron | 30.0% | |
| CAAAAAATGGGCAAATACTT+TGG | - | chr8_3:30354818-30354837 | Msa1285540:intron | 30.0% | |
| AGTTTGGATATTGGTAAACA+TGG | - | chr8_3:30354852-30354871 | Msa1285540:intron | 30.0% | |
| TGTTTGGATATTGGTAAACA+TGG | - | chr8_3:30354936-30354955 | Msa1285540:intron | 30.0% | |
| TATTTACCAGGTTTGGATTA+AGG | + | chr8_3:30355036-30355055 | None:intergenic | 30.0% | |
| AGAGAACTGATGTTGAAATT+CGG | - | chr8_3:30355101-30355120 | Msa1285540:intron | 30.0% | |
| !! | GTTTTTCAATATCTTGGTTG+AGG | - | chr8_3:30355318-30355337 | Msa1285540:intron | 30.0% |
| TGAAAATTGATGTCCGAAAT+TGG | - | chr8_3:30355368-30355387 | Msa1285540:intron | 30.0% | |
| GCAATATCAATATCATCAAG+AGG | + | chr8_3:30355558-30355577 | None:intergenic | 30.0% | |
| ! | CTTGATGATATTGATATTGC+TGG | - | chr8_3:30355558-30355577 | Msa1285540:intron | 30.0% |
| ! | TATAGTTTTCTTACATGTGC+AGG | - | chr8_3:30355781-30355800 | Msa1285540:CDS | 30.0% |
| TGTTGACAAATGAACTGAAA+TGG | - | chr8_3:30356088-30356107 | Msa1285540:intron | 30.0% | |
| CATATACAAGATTGTTTGTG+TGG | - | chr8_3:30356151-30356170 | Msa1285540:intron | 30.0% | |
| TTGCATGTTTGACATATTCA+TGG | + | chr8_3:30356568-30356587 | None:intergenic | 30.0% | |
| ! | CTGCACAAATGATAATGTAT+GGG | + | chr8_3:30356610-30356629 | None:intergenic | 30.0% |
| ! | TCTGCACAAATGATAATGTA+TGG | + | chr8_3:30356611-30356630 | None:intergenic | 30.0% |
| TCTTGTTCAAATAAGCTTAG+AGG | - | chr8_3:30356637-30356656 | Msa1285540:intron | 30.0% | |
| TATAAGTACTAAATGTGGGT+TGG | + | chr8_3:30356721-30356740 | None:intergenic | 30.0% | |
| CATGCTATAAGTACTAAATG+TGG | + | chr8_3:30356726-30356745 | None:intergenic | 30.0% | |
| TCCACATGATTTCAGTTAAA+GGG | - | chr8_3:30356881-30356900 | Msa1285540:intron | 30.0% | |
| TTGACTAATAATAAAGGGAG+AGG | - | chr8_3:30356930-30356949 | Msa1285540:intron | 30.0% | |
| AATCATGTGGATAAATTGAG+AGG | + | chr8_3:30357072-30357091 | None:intergenic | 30.0% | |
| !! | ATCCACATGATTTTAGTGAA+AGG | - | chr8_3:30357080-30357099 | Msa1285540:intron | 30.0% |
| TTCCTTTCACTAAAATCATG+TGG | + | chr8_3:30357085-30357104 | None:intergenic | 30.0% | |
| TATATGGGTAACTTTAACGT+AGG | + | chr8_3:30357271-30357290 | None:intergenic | 30.0% | |
| ! | AGGTTGGTCAACTTATATAT+GGG | + | chr8_3:30357286-30357305 | None:intergenic | 30.0% |
| !! | GGCATTAGTTTGATATTTTG+AGG | + | chr8_3:30357306-30357325 | None:intergenic | 30.0% |
| CTAATGCCAAGAAACATAAA+AGG | - | chr8_3:30357318-30357337 | Msa1285540:intron | 30.0% | |
| GTTACACCATTGTAAAATTG+TGG | + | chr8_3:30357436-30357455 | None:intergenic | 30.0% | |
| TTTCGAACGCATGAAAAATA+TGG | + | chr8_3:30357458-30357477 | None:intergenic | 30.0% | |
| TTGAAAGCAGGAAAAAAAGA+TGG | + | chr8_3:30357670-30357689 | None:intergenic | 30.0% | |
| !! | AGATGAGTAATTTTGAAAGC+AGG | + | chr8_3:30357682-30357701 | None:intergenic | 30.0% |
| ! | AGATGAGTAATTTTGAACAC+AGG | + | chr8_3:30357890-30357909 | None:intergenic | 30.0% |
| GCTTGTAGTAATTGAATAGT+GGG | + | chr8_3:30358158-30358177 | None:intergenic | 30.0% | |
| TGCTTGTAGTAATTGAATAG+TGG | + | chr8_3:30358159-30358178 | None:intergenic | 30.0% | |
| TTTGAATTTAGAGACCATAG+AGG | + | chr8_3:30358326-30358345 | None:intergenic | 30.0% | |
| AATCTGAATTTGAATGTGGA+TGG | + | chr8_3:30358371-30358390 | None:intergenic | 30.0% | |
| GATGAATCTGAATTTGAATG+TGG | + | chr8_3:30358375-30358394 | None:intergenic | 30.0% | |
| ! | TGAGATTTGATGCTAGATTT+TGG | + | chr8_3:30358422-30358441 | None:intergenic | 30.0% |
| !! | CCAAATGGCTATTTCAATTT+TGG | + | chr8_3:30358499-30358518 | None:intergenic | 30.0% |
| CCAAAATTGAAATAGCCATT+TGG | - | chr8_3:30358496-30358515 | Msa1285540:intron | 30.0% | |
| GCAATTGAATCTTATCCAAA+TGG | + | chr8_3:30358514-30358533 | None:intergenic | 30.0% | |
| AGAGTCAATCAAATTACCTA+AGG | + | chr8_3:30358677-30358696 | None:intergenic | 30.0% | |
| TTGCATGCAAGAAAAACATA+TGG | + | chr8_3:30358783-30358802 | None:intergenic | 30.0% | |
| ! | GTTTTTCTTGCATGCAAAAT+TGG | - | chr8_3:30358786-30358805 | Msa1285540:intron | 30.0% |
| GCTAAAACAATACCATTCTA+TGG | + | chr8_3:30358910-30358929 | None:intergenic | 30.0% | |
| !!! | TAGAATGGTATTGTTTTAGC+AGG | - | chr8_3:30358910-30358929 | Msa1285540:intron | 30.0% |
| GTGATGTGTTTGTAAAATTG+TGG | + | chr8_3:30358971-30358990 | None:intergenic | 30.0% | |
| !! | TTTTCATTTAATAGAGCACC+AGG | + | chr8_3:30359080-30359099 | None:intergenic | 30.0% |
| TTTATCTCAAACTTTGCACT+CGG | + | chr8_3:30359142-30359161 | None:intergenic | 30.0% | |
| AAGTTAAGCCATTCTTTAGT+TGG | + | chr8_3:30359494-30359513 | None:intergenic | 30.0% | |
| !! | GATTTGTTGGTAATTGCAAA+TGG | + | chr8_3:30359543-30359562 | None:intergenic | 30.0% |
| ! | TTGAATCTTGTATTTGGTGA+AGG | + | chr8_3:30359795-30359814 | None:intergenic | 30.0% |
| AAGAAAAACTTCACCTTCAA+CGG | - | chr8_3:30359813-30359832 | Msa1285540:intron | 30.0% | |
| !!! | AAGTATTTTAGCCATGTCAT+CGG | - | chr8_3:30360148-30360167 | Msa1285540:intron | 30.0% |
| !! | TAACATTTGGTGTGTCTATA+AGG | - | chr8_3:30360188-30360207 | Msa1285540:intron | 30.0% |
| TATCAGCACTCTATAATGAA+AGG | - | chr8_3:30360220-30360239 | Msa1285540:intron | 30.0% | |
| ATCAGCACTCTATAATGAAA+GGG | - | chr8_3:30360221-30360240 | Msa1285540:intron | 30.0% | |
| TCTGACAGCATAATTAGAAA+AGG | + | chr8_3:30360281-30360300 | None:intergenic | 30.0% | |
| !!! | TGTCAGATTTTTAAGACTTC+TGG | - | chr8_3:30360294-30360313 | Msa1285540:intron | 30.0% |
| !!! | ATTTTTAAGACTTCTGGTCA+AGG | - | chr8_3:30360300-30360319 | Msa1285540:intron | 30.0% |
| AGTAAGACTATGATCCTATA+TGG | + | chr8_3:30360703-30360722 | None:intergenic | 30.0% | |
| TTATGGTTATGGTTTCAATC+AGG | - | chr8_3:30360742-30360761 | Msa1285540:intron | 30.0% | |
| ATAACAGCATCGCAATATAA+CGG | + | chr8_3:30360934-30360953 | None:intergenic | 30.0% | |
| CTTATTAAAGTTGTAAGCGT+CGG | - | chr8_3:30360992-30361011 | Msa1285540:five_prime_UTR | 30.0% | |
| GTAAGAGTTGTCCATATTTA+AGG | - | chr8_3:30361031-30361050 | Msa1285540:five_prime_UTR | 30.0% | |
| AACTTTGAATGAGTATGCAA+TGG | + | chr8_3:30361105-30361124 | None:intergenic | 30.0% | |
| ATTGCATACTCATTCAAAGT+TGG | - | chr8_3:30361104-30361123 | Msa1285540:five_prime_UTR | 30.0% | |
| TTGCATACTCATTCAAAGTT+GGG | - | chr8_3:30361105-30361124 | Msa1285540:five_prime_UTR | 30.0% | |
| TGTGACTAAGATGTTTCCAA+CGG | + | chr8_3:30354663-30354682 | None:intergenic | 35.0% | |
| GAATATCTTTGTTGAAGGTG+AGG | - | chr8_3:30354721-30354740 | Msa1285540:intron | 35.0% | |
| TTAAAGCCTTAATCCAAACC+TGG | - | chr8_3:30355027-30355046 | Msa1285540:intron | 35.0% | |
| !! | TGTTGCTGATTCTTTGTTGA+AGG | - | chr8_3:30355278-30355297 | Msa1285540:intron | 35.0% |
| TCTTTGTTGAAGGTGAACTT+TGG | - | chr8_3:30355288-30355307 | Msa1285540:intron | 35.0% | |
| ! | GGTTGAGGGTTTTACATTTT+TGG | - | chr8_3:30355333-30355352 | Msa1285540:intron | 35.0% |
| ! | TGTGCAGGTACAATTTTCAT+TGG | - | chr8_3:30355796-30355815 | Msa1285540:CDS | 35.0% |
| ! | CAGGTACAATTTTCATTGGT+GGG | - | chr8_3:30355800-30355819 | Msa1285540:CDS | 35.0% |
| ! | AGGTACAATTTTCATTGGTG+GGG | - | chr8_3:30355801-30355820 | Msa1285540:CDS | 35.0% |
| AGAGAGCAAATAAACCGTTT+AGG | + | chr8_3:30356021-30356040 | None:intergenic | 35.0% | |
| TTTGAAAGATTGACGATGCA+AGG | - | chr8_3:30356052-30356071 | Msa1285540:intron | 35.0% | |
| TCAGTTCATTTGTCAACAAG+AGG | + | chr8_3:30356086-30356105 | None:intergenic | 35.0% | |
| AGAATTCTGAGTTCCTAAGA+GGG | + | chr8_3:30356233-30356252 | None:intergenic | 35.0% | |
| AAGAATTCTGAGTTCCTAAG+AGG | + | chr8_3:30356234-30356253 | None:intergenic | 35.0% | |
| AGGGATACACAAACAAATCA+TGG | + | chr8_3:30356266-30356285 | None:intergenic | 35.0% | |
| TACTGTGTTTGTACGAACAA+TGG | - | chr8_3:30356454-30356473 | Msa1285540:intron | 35.0% | |
| ACTGTGTTTGTACGAACAAT+GGG | - | chr8_3:30356455-30356474 | Msa1285540:intron | 35.0% | |
| ATAATGTATGGGTCGAGTAT+GGG | + | chr8_3:30356599-30356618 | None:intergenic | 35.0% | |
| CTCCACATGATTTCAGTTAA+AGG | - | chr8_3:30356880-30356899 | Msa1285540:intron | 35.0% | |
| TCCCTTTAACTGAAATCATG+TGG | + | chr8_3:30356885-30356904 | None:intergenic | 35.0% | |
| ATTGAGAGGAAGAGAGAAAT+TGG | + | chr8_3:30357058-30357077 | None:intergenic | 35.0% | |
| ! | GAGGTTGGTCAACTTATATA+TGG | + | chr8_3:30357287-30357306 | None:intergenic | 35.0% |
| ATGCCAAGAAACATAAAAGG+TGG | - | chr8_3:30357321-30357340 | Msa1285540:intron | 35.0% | |
| ! | TGACCACCTTTTATGTTTCT+TGG | + | chr8_3:30357327-30357346 | None:intergenic | 35.0% |
| GGTTATGTGCTTCAATTATC+TGG | + | chr8_3:30357627-30357646 | None:intergenic | 35.0% | |
| TAGAGTCCAAGAAACGTAAT+AGG | - | chr8_3:30357740-30357759 | Msa1285540:intron | 35.0% | |
| TGATCACCTATTACGTTTCT+TGG | + | chr8_3:30357749-30357768 | None:intergenic | 35.0% | |
| ! | ACGTAATAGGTGATCACTTT+TGG | - | chr8_3:30357753-30357772 | Msa1285540:intron | 35.0% |
| ! | GGTTTTCACATGATAACTTC+AGG | - | chr8_3:30357807-30357826 | Msa1285540:intron | 35.0% |
| ! | TATATCCTTTTAAGCCAACC+TGG | + | chr8_3:30357998-30358017 | None:intergenic | 35.0% |
| !! | GAATTGTCCAAGGTCTTATT+TGG | + | chr8_3:30358296-30358315 | None:intergenic | 35.0% |
| ATAAGACCTTGGACAATTCT+AGG | - | chr8_3:30358297-30358316 | Msa1285540:intron | 35.0% | |
| AAATTCAGATTCATCACACC+TGG | - | chr8_3:30358380-30358399 | Msa1285540:intron | 35.0% | |
| AATTCAGATTCATCACACCT+GGG | - | chr8_3:30358381-30358400 | Msa1285540:intron | 35.0% | |
| TAACAGTAGCAATTGCAGAA+TGG | - | chr8_3:30358445-30358464 | Msa1285540:intron | 35.0% | |
| TTTGCAAGTTAGGAACAAGA+TGG | + | chr8_3:30358550-30358569 | None:intergenic | 35.0% | |
| ! | TCTGGAAGATTTTGCAAGTT+AGG | + | chr8_3:30358560-30358579 | None:intergenic | 35.0% |
| AGTAAGAACATGATGTCCTT+AGG | - | chr8_3:30358658-30358677 | Msa1285540:intron | 35.0% | |
| ! | GTTACGCCTTTGTGAAATTT+TGG | + | chr8_3:30358761-30358780 | None:intergenic | 35.0% |
| GGTTACACGCTTCAAATATT+TGG | + | chr8_3:30358950-30358969 | None:intergenic | 35.0% | |
| GCGGTGATATATTTGTAACT+TGG | + | chr8_3:30359058-30359077 | None:intergenic | 35.0% | |
| TCGCTAAATCTCTCTATTGA+AGG | + | chr8_3:30359170-30359189 | None:intergenic | 35.0% | |
| TCAATAGAGAGATTTAGCGA+CGG | - | chr8_3:30359170-30359189 | Msa1285540:intron | 35.0% | |
| TTCGAGGAAAATTGCAAAGA+CGG | - | chr8_3:30359220-30359239 | Msa1285540:CDS | 35.0% | |
| ! | TGGTTACAGTGTAGTTTTTG+TGG | + | chr8_3:30359286-30359305 | None:intergenic | 35.0% |
| GTGATTGTATTTGTACGTTC+TGG | + | chr8_3:30359306-30359325 | None:intergenic | 35.0% | |
| CCAATCATTTAGTCTCTCTT+TGG | + | chr8_3:30359392-30359411 | None:intergenic | 35.0% | |
| CCAAAGAGAGACTAAATGAT+TGG | - | chr8_3:30359389-30359408 | Msa1285540:CDS | 35.0% | |
| GACACAAACCAACTAAAGAA+TGG | - | chr8_3:30359483-30359502 | Msa1285540:intron | 35.0% | |
| TTGTCTGATTGTTGCATTCT+GGG | + | chr8_3:30359621-30359640 | None:intergenic | 35.0% | |
| ATTGTCTGATTGTTGCATTC+TGG | + | chr8_3:30359622-30359641 | None:intergenic | 35.0% | |
| AAACAGTAACTGTTGAATCG+CGG | - | chr8_3:30359863-30359882 | Msa1285540:intron | 35.0% | |
| !! | TTTTGGATCGTATTTGTTGG+AGG | - | chr8_3:30359903-30359922 | Msa1285540:intron | 35.0% |
| TTATGGTTTCAATCAGGCAT+AGG | - | chr8_3:30360748-30360767 | Msa1285540:intron | 35.0% | |
| AAGTTAAGGTTTCCAAAGTC+AGG | + | chr8_3:30360777-30360796 | None:intergenic | 35.0% | |
| TTCGCTCACATGAAAAGTTA+AGG | + | chr8_3:30360791-30360810 | None:intergenic | 35.0% | |
| AAGTTGTGTGTCAAGAAAGA+GGG | + | chr8_3:30360865-30360884 | None:intergenic | 35.0% | |
| TAAGTTGTGTGTCAAGAAAG+AGG | + | chr8_3:30360866-30360885 | None:intergenic | 35.0% | |
| ! | CTTTTGCGACTCCTTAAATA+TGG | + | chr8_3:30361045-30361064 | None:intergenic | 35.0% |
| CATGATGTTGTCTAAGTTGT+AGG | - | chr8_3:30361070-30361089 | Msa1285540:five_prime_UTR | 35.0% | |
| TGCATACTCATTCAAAGTTG+GGG | - | chr8_3:30361106-30361125 | Msa1285540:five_prime_UTR | 35.0% | |
| AAGGTGGATAAAACGGAACA+GGG | + | chr8_3:30354504-30354523 | None:intergenic | 40.0% | |
| TGGAATGAGACAGATCAAGT+GGG | + | chr8_3:30354566-30354585 | None:intergenic | 40.0% | |
| CGAAAAGATTGAGTAACCGA+CGG | + | chr8_3:30354692-30354711 | None:intergenic | 40.0% | |
| ! | CGGTTACTCAATCTTTTCGT+CGG | - | chr8_3:30354693-30354712 | Msa1285540:intron | 40.0% |
| AGATTCAGATTCATCACACC+TGG | + | chr8_3:30355138-30355157 | None:intergenic | 40.0% | |
| ! | GCAGGTACAATTTTCATTGG+TGG | - | chr8_3:30355799-30355818 | Msa1285540:CDS | 40.0% |
| AAGATTGTTTGTGTGGTGCT+TGG | - | chr8_3:30356158-30356177 | Msa1285540:intron | 40.0% | |
| AGGATTTGTGTATCCCTCTT+AGG | - | chr8_3:30356217-30356236 | Msa1285540:intron | 40.0% | |
| !! | TCCATGGCATTGTTCTAAGA+GGG | + | chr8_3:30356285-30356304 | None:intergenic | 40.0% |
| ! | ATCCATGGCATTGTTCTAAG+AGG | + | chr8_3:30356286-30356305 | None:intergenic | 40.0% |
| CTTAGAACAATGCCATGGAT+TGG | - | chr8_3:30356286-30356305 | Msa1285540:intron | 40.0% | |
| CACACAAAATCACCAATCCA+TGG | + | chr8_3:30356301-30356320 | None:intergenic | 40.0% | |
| CTGTGTTTGTACGAACAATG+GGG | - | chr8_3:30356456-30356475 | Msa1285540:intron | 40.0% | |
| GATAATGTATGGGTCGAGTA+TGG | + | chr8_3:30356600-30356619 | None:intergenic | 40.0% | |
| GTACTTATAGCATGAGTGAG+AGG | - | chr8_3:30356732-30356751 | Msa1285540:intron | 40.0% | |
| AATGATCCTCTGTGTTTCAC+AGG | - | chr8_3:30356955-30356974 | Msa1285540:intron | 40.0% | |
| CTAAAACCTGTGAAACACAG+AGG | + | chr8_3:30356964-30356983 | None:intergenic | 40.0% | |
| ! | GGTTAAGTGCAGCTCATTTT+TGG | + | chr8_3:30356996-30357015 | None:intergenic | 40.0% |
| !!! | CTTTTGAAATTTCCCTTGCC+AGG | - | chr8_3:30357977-30357996 | Msa1285540:intron | 40.0% |
| TCAATTACTACAAGCAGCAG+AGG | - | chr8_3:30358163-30358182 | Msa1285540:intron | 40.0% | |
| CAACCATCCAAATAAGACCT+TGG | - | chr8_3:30358286-30358305 | Msa1285540:intron | 40.0% | |
| !! | TGTCCAAGGTCTTATTTGGA+TGG | + | chr8_3:30358292-30358311 | None:intergenic | 40.0% |
| !! | ACAATTCTAGGACTCCTCTA+TGG | - | chr8_3:30358309-30358328 | Msa1285540:intron | 40.0% |
| CTGAATTTGAATGTGGATGG+AGG | + | chr8_3:30358368-30358387 | None:intergenic | 40.0% | |
| ATTCAGATTCATCACACCTG+GGG | - | chr8_3:30358382-30358401 | Msa1285540:intron | 40.0% | |
| !!! | ACCTTGTTTTCTTGAACGCA+GGG | + | chr8_3:30359005-30359024 | None:intergenic | 40.0% |
| !!! | TACCTTGTTTTCTTGAACGC+AGG | + | chr8_3:30359006-30359025 | None:intergenic | 40.0% |
| GTTACAAATATATCACCGCC+TGG | - | chr8_3:30359059-30359078 | Msa1285540:intron | 40.0% | |
| ! | TCATTTAATAGAGCACCAGG+CGG | + | chr8_3:30359077-30359096 | None:intergenic | 40.0% |
| CAATAGAGAGATTTAGCGAC+GGG | - | chr8_3:30359171-30359190 | Msa1285540:intron | 40.0% | |
| AGGAAAATTGCAAAGACGGA+GGG | - | chr8_3:30359224-30359243 | Msa1285540:CDS | 40.0% | |
| ! | TTGGTAATTGCAAATGGGTC+TGG | + | chr8_3:30359537-30359556 | None:intergenic | 40.0% |
| ! | GTTGCTACTGTCTGATTTGT+TGG | + | chr8_3:30359556-30359575 | None:intergenic | 40.0% |
| ! | GGCTTTTGGATCGTATTTGT+TGG | - | chr8_3:30359900-30359919 | Msa1285540:intron | 40.0% |
| AGAGGTTAATTAAGCTGTCG+CGG | - | chr8_3:30359936-30359955 | Msa1285540:intron | 40.0% | |
| !!! | TATTTTAGCCATGTCATCGG+TGG | - | chr8_3:30360151-30360170 | Msa1285540:intron | 40.0% |
| ! | ATGAGGGGGTGTATAACATT+TGG | - | chr8_3:30360175-30360194 | Msa1285540:intron | 40.0% |
| !! | CATTTGGTGTGTCTATAAGG+TGG | - | chr8_3:30360191-30360210 | Msa1285540:intron | 40.0% |
| TCTCTCATCTTGTCTGTTCT+AGG | - | chr8_3:30360831-30360850 | Msa1285540:intron | 40.0% | |
| AGTTGTGTGTCAAGAAAGAG+GGG | + | chr8_3:30360864-30360883 | None:intergenic | 40.0% | |
| GTGAATGACTAAGCATTCCA+GGG | + | chr8_3:30361139-30361158 | None:intergenic | 40.0% | |
| TGTGAATGACTAAGCATTCC+AGG | + | chr8_3:30361140-30361159 | None:intergenic | 40.0% | |
| TGCTTAGTCATTCACACGAT+TGG | - | chr8_3:30361144-30361163 | Msa1285540:five_prime_UTR | 40.0% | |
| AGGTGGATAAAACGGAACAG+GGG | + | chr8_3:30354503-30354522 | None:intergenic | 45.0% | |
| GAAGGTGGATAAAACGGAAC+AGG | + | chr8_3:30354505-30354524 | None:intergenic | 45.0% | |
| ! | TCCGTTTTATCCACCTTCGT+CGG | - | chr8_3:30354507-30354526 | Msa1285540:CDS | 45.0% |
| TCCGACGAAGGTGGATAAAA+CGG | + | chr8_3:30354511-30354530 | None:intergenic | 45.0% | |
| TGAAATCTTCTCTCCGACGA+AGG | + | chr8_3:30354523-30354542 | None:intergenic | 45.0% | |
| CTGGAATGAGACAGATCAAG+TGG | + | chr8_3:30354567-30354586 | None:intergenic | 45.0% | |
| ATGACGCAACAGTGATTGTG+AGG | + | chr8_3:30354599-30354618 | None:intergenic | 45.0% | |
| CTTAGTCACAATTCAGCCGT+CGG | - | chr8_3:30354673-30354692 | Msa1285540:intron | 45.0% | |
| TTCAGATTCATCACACCTGG+CGG | + | chr8_3:30358383-30358402 | None:intergenic | 45.0% | |
| !!! | TTTTCATTGGTGGGGTGTTG+TGG | - | chr8_3:30355809-30355828 | Msa1285540:CDS | 45.0% |
| !! | TTTCATTGGTGGGGTGTTGT+GGG | - | chr8_3:30355810-30355829 | Msa1285540:CDS | 45.0% |
| TGTCACAGCTGATGACATCT+TGG | - | chr8_3:30355911-30355930 | Msa1285540:intron | 45.0% | |
| GTCACAGCTGATGACATCTT+GGG | - | chr8_3:30355912-30355931 | Msa1285540:intron | 45.0% | |
| TCCCTCTTAGAACAATGCCA+TGG | - | chr8_3:30356281-30356300 | Msa1285540:intron | 45.0% | |
| TGTACGAACAATGGGGATGA+AGG | - | chr8_3:30356463-30356482 | Msa1285540:intron | 45.0% | |
| GTACGAACAATGGGGATGAA+GGG | - | chr8_3:30356464-30356483 | Msa1285540:intron | 45.0% | |
| TGAAATTTCCCTTGCCAGGT+TGG | - | chr8_3:30357981-30358000 | Msa1285540:intron | 45.0% | |
| ! | CTTTTAAGCCAACCTGGCAA+GGG | + | chr8_3:30357992-30358011 | None:intergenic | 45.0% |
| AGGAGTCCTAGAATTGTCCA+AGG | + | chr8_3:30358306-30358325 | None:intergenic | 45.0% | |
| TGTGGATGGAGGATGCTTTA+AGG | + | chr8_3:30358357-30358376 | None:intergenic | 45.0% | |
| TTCAGATTCATCACACCTGG+GGG | - | chr8_3:30358383-30358402 | Msa1285540:intron | 45.0% | |
| CTCGTTTGTGCTTGAAAGTC+TGG | + | chr8_3:30358640-30358659 | None:intergenic | 45.0% | |
| TGAACGCAGGGGAAAAAACA+TGG | + | chr8_3:30358993-30359012 | None:intergenic | 45.0% | |
| !!! | CCTTGTTTTCTTGAACGCAG+GGG | + | chr8_3:30359004-30359023 | None:intergenic | 45.0% |
| CTTTGACGCCAAAATAGAGC+CGG | - | chr8_3:30359195-30359214 | Msa1285540:CDS | 45.0% | |
| TTTGACGCCAAAATAGAGCC+GGG | - | chr8_3:30359196-30359215 | Msa1285540:CDS | 45.0% | |
| ! | TTGCAATTTTCCTCGAAGCC+CGG | + | chr8_3:30359217-30359236 | None:intergenic | 45.0% |
| GAGGAAAATTGCAAAGACGG+AGG | - | chr8_3:30359223-30359242 | Msa1285540:CDS | 45.0% | |
| AAAATTGCAAAGACGGAGGG+AGG | - | chr8_3:30359227-30359246 | Msa1285540:CDS | 45.0% | |
| CACCACGCAAAGATAGATGT+AGG | - | chr8_3:30359254-30359273 | Msa1285540:CDS | 45.0% | |
| CTCCTACATCTATCTTTGCG+TGG | + | chr8_3:30359259-30359278 | None:intergenic | 45.0% | |
| ATCAGACTTTACGCCATCAG+CGG | - | chr8_3:30359361-30359380 | Msa1285540:intron | 45.0% | |
| TCACCTTCAACGGAGAGATT+CGG | - | chr8_3:30359823-30359842 | Msa1285540:intron | 45.0% | |
| AGTAACTGTTGAATCGCGGA+AGG | - | chr8_3:30359867-30359886 | Msa1285540:intron | 45.0% | |
| ! | GGATCGTATTTGTTGGAGGA+AGG | - | chr8_3:30359907-30359926 | Msa1285540:intron | 45.0% |
| TAATTAAGCTGTCGCGGTTG+AGG | - | chr8_3:30359942-30359961 | Msa1285540:intron | 45.0% | |
| AATTAAGCTGTCGCGGTTGA+GGG | - | chr8_3:30359943-30359962 | Msa1285540:intron | 45.0% | |
| AGAGATGGAGGGAGAGATTT+CGG | - | chr8_3:30359966-30359985 | Msa1285540:intron | 45.0% | |
| AAGACTTCTGGTCAAGGACA+AGG | - | chr8_3:30360306-30360325 | Msa1285540:intron | 45.0% | |
| GTTGTGTGTCAAGAAAGAGG+GGG | + | chr8_3:30360863-30360882 | None:intergenic | 45.0% | |
| AGTCATTCACACGATTGGTG+AGG | - | chr8_3:30361149-30361168 | Msa1285540:five_prime_UTR | 45.0% | |
| GTCATTCACACGATTGGTGA+GGG | - | chr8_3:30361150-30361169 | Msa1285540:five_prime_UTR | 45.0% | |
| !! | TAATATTAATGAAAAATATA+TGG | + | chr8_3:30356357-30356376 | None:intergenic | 5.0% |
| AATCTTCTCTCCGACGAAGG+TGG | + | chr8_3:30354520-30354539 | None:intergenic | 50.0% | |
| AAGTGGGACGTCGACGAAAA+TGG | + | chr8_3:30354550-30354569 | None:intergenic | 50.0% | |
| CAACAGTGATTGTGAGGCGA+CGG | + | chr8_3:30354593-30354612 | None:intergenic | 50.0% | |
| GTTTCCAACGGTGAGAGTGA+GGG | + | chr8_3:30354651-30354670 | None:intergenic | 50.0% | |
| TGTTTCCAACGGTGAGAGTG+AGG | + | chr8_3:30354652-30354671 | None:intergenic | 50.0% | |
| ! | GGGTGTTGTGGGTTGCAATT+AGG | - | chr8_3:30355821-30355840 | Msa1285540:CDS | 50.0% |
| TGCAATGACAAACCAGCGTG+TGG | - | chr8_3:30356319-30356338 | Msa1285540:intron | 50.0% | |
| ACAAACCAGCGTGTGGACAA+TGG | - | chr8_3:30356326-30356345 | Msa1285540:intron | 50.0% | |
| ! | CCTTTTAAGCCAACCTGGCA+AGG | + | chr8_3:30357993-30358012 | None:intergenic | 50.0% |
| !! | CCTTGCCAGGTTGGCTTAAA+AGG | - | chr8_3:30357990-30358009 | Msa1285540:intron | 50.0% |
| ACTACAAGCAGCAGAGGCTA+TGG | - | chr8_3:30358169-30358188 | Msa1285540:intron | 50.0% | |
| CTACAAGCAGCAGAGGCTAT+GGG | - | chr8_3:30358170-30358189 | Msa1285540:intron | 50.0% | |
| TCAGATTCATCACACCTGGG+GGG | - | chr8_3:30358384-30358403 | Msa1285540:intron | 50.0% | |
| CCCCTGCGTTCAAGAAAACA+AGG | - | chr8_3:30359001-30359020 | Msa1285540:intron | 50.0% | |
| CTCTTTGGATGTTCCGCTGA+TGG | + | chr8_3:30359377-30359396 | None:intergenic | 50.0% | |
| TTGCCGAATCTCTCCGTTGA+AGG | + | chr8_3:30359829-30359848 | None:intergenic | 50.0% | |
| ! | AAGGAGATCGCAGTGGCTTT+TGG | - | chr8_3:30359886-30359905 | Msa1285540:intron | 50.0% |
| CAAGATTCGCTCGTAGAGAG+AGG | - | chr8_3:30360026-30360045 | Msa1285540:intron | 50.0% | |
| CCATGTCATCGGTGGTATGA+GGG | - | chr8_3:30360159-30360178 | Msa1285540:intron | 50.0% | |
| CATGTCATCGGTGGTATGAG+GGG | - | chr8_3:30360160-30360179 | Msa1285540:intron | 50.0% | |
| ATGTCATCGGTGGTATGAGG+GGG | - | chr8_3:30360161-30360180 | Msa1285540:intron | 50.0% | |
| AGGCATAGGATGCCTGACTT+TGG | - | chr8_3:30360762-30360781 | Msa1285540:intron | 50.0% | |
| TGGGACGTCGACGAAAATGG+TGG | + | chr8_3:30354547-30354566 | None:intergenic | 55.0% | |
| GTGAGAGTGAGGGATCAAGG+AGG | + | chr8_3:30354641-30354660 | None:intergenic | 55.0% | |
| ACGGTGAGAGTGAGGGATCA+AGG | + | chr8_3:30354644-30354663 | None:intergenic | 55.0% | |
| TGATCCCTCACTCTCACCGT+TGG | - | chr8_3:30354644-30354663 | Msa1285540:intron | 55.0% | |
| TTCATCACACCTGGCGGAGA+GGG | + | chr8_3:30355129-30355148 | None:intergenic | 55.0% | |
| ATTCATCACACCTGGCGGAG+AGG | + | chr8_3:30355130-30355149 | None:intergenic | 55.0% | |
| TCGTTACAGCCTACGTGCCT+TGG | - | chr8_3:30355163-30355182 | Msa1285540:intron | 55.0% | |
| CAACGATGAGAGTCACGCGA+CGG | + | chr8_3:30355194-30355213 | None:intergenic | 55.0% | |
| CATTGCCATTGTCCACACGC+TGG | + | chr8_3:30356334-30356353 | None:intergenic | 55.0% | |
| TGGGGATGAAGGGTGAGATG+CGG | - | chr8_3:30356474-30356493 | Msa1285540:intron | 55.0% | |
| CAGATTCATCACACCTGGGG+GGG | - | chr8_3:30358385-30358404 | Msa1285540:intron | 55.0% | |
| AGATTCATCACACCTGGGGG+GGG | - | chr8_3:30358386-30358405 | Msa1285540:intron | 55.0% | |
| ! | CTCGAAGCCCGGCTCTATTT+TGG | + | chr8_3:30359206-30359225 | None:intergenic | 55.0% |
| CAAAATAGAGCCGGGCTTCG+AGG | - | chr8_3:30359204-30359223 | Msa1285540:CDS | 55.0% | |
| GTTGGAGGAAGGAGATCGAG+AGG | - | chr8_3:30359918-30359937 | Msa1285540:intron | 55.0% | |
| ATTTCGGCCGTCGGAGGAAA+TGG | - | chr8_3:30359982-30360001 | Msa1285540:intron | 55.0% | |
| GGAAATGGCGCAGAGAGAGA+TGG | - | chr8_3:30359997-30360016 | Msa1285540:intron | 55.0% | |
| TTCGCTCGTAGAGAGAGGTG+AGG | - | chr8_3:30360031-30360050 | Msa1285540:intron | 55.0% | |
| GCCATGTCATCGGTGGTATG+AGG | - | chr8_3:30360158-30360177 | Msa1285540:intron | 55.0% | |
| CCCTCATACCACCGATGACA+TGG | + | chr8_3:30360162-30360181 | None:intergenic | 55.0% | |
| GTGTCAAGAAAGAGGGGGCA+GGG | + | chr8_3:30360858-30360877 | None:intergenic | 55.0% | |
| TGTGTCAAGAAAGAGGGGGC+AGG | + | chr8_3:30360859-30360878 | None:intergenic | 55.0% | |
| AAAGTTGGGGCTTGATGCCC+TGG | - | chr8_3:30361119-30361138 | Msa1285540:five_prime_UTR | 55.0% | |
| CAGTGATTGTGAGGCGACGG+TGG | + | chr8_3:30354590-30354609 | None:intergenic | 60.0% | |
| ACGGCGAATCCAAGGCACGT+AGG | + | chr8_3:30355175-30355194 | None:intergenic | 60.0% | |
| CGTCGCGTGACTCTCATCGT+TGG | - | chr8_3:30355192-30355211 | Msa1285540:intron | 60.0% | |
| GATTCATCACACCTGGGGGG+GGG | - | chr8_3:30358387-30358406 | Msa1285540:intron | 60.0% | |
| ATTCATCACACCTGGGGGGG+GGG | - | chr8_3:30358388-30358407 | Msa1285540:intron | 60.0% | |
| ATCGCGGAAGGAGATCGCAG+TGG | - | chr8_3:30359879-30359898 | Msa1285540:intron | 60.0% | |
| TGTCGCGGTTGAGGGAGAGA+TGG | - | chr8_3:30359951-30359970 | Msa1285540:intron | 60.0% | |
| GCGGTTGAGGGAGAGATGGA+GGG | - | chr8_3:30359955-30359974 | Msa1285540:intron | 60.0% | |
| GAGGGAGAGATTTCGGCCGT+CGG | - | chr8_3:30359973-30359992 | Msa1285540:intron | 60.0% | |
| CTCTGCGCCATTTCCTCCGA+CGG | + | chr8_3:30359992-30360011 | None:intergenic | 60.0% | |
| TTGGTGAGGGCTTGATGCCC+TGG | - | chr8_3:30361163-30361182 | Msa1285540:five_prime_UTR | 60.0% | |
| GATTGTGAGGCGACGGTGGC+TGG | + | chr8_3:30354586-30354605 | None:intergenic | 65.0% | |
| !! | AATTCGGTGCCCTCTCCGCC+AGG | - | chr8_3:30355117-30355136 | Msa1285540:intron | 65.0% |
| GTCACGCGACGGCGAATCCA+AGG | + | chr8_3:30355183-30355202 | None:intergenic | 65.0% | |
| TTCATCACACCTGGGGGGGG+GGG | - | chr8_3:30358389-30358408 | Msa1285540:intron | 65.0% | |
| CGCGGTTGAGGGAGAGATGG+AGG | - | chr8_3:30359954-30359973 | Msa1285540:intron | 65.0% | |
| GGAGAGATTTCGGCCGTCGG+AGG | - | chr8_3:30359976-30359995 | Msa1285540:intron | 65.0% | |
| TCATCACACCTGGGGGGGGG+GGG | - | chr8_3:30358390-30358409 | Msa1285540:intron | 70.0% | |
| CATCACACCTGGGGGGGGGG+GGG | - | chr8_3:30358391-30358410 | Msa1285540:intron | 75.0% | |
| ATCACACCTGGGGGGGGGGG+GGG | - | chr8_3:30358392-30358411 | Msa1285540:intron | 75.0% | |
| ! | TCACACCTGGGGGGGGGGGG+GGG | - | chr8_3:30358393-30358412 | Msa1285540:intron | 80.0% |
| ! | GGTATCCCCCCCCCCCCCCC+AGG | + | chr8_3:30358401-30358420 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 30354484 | 30361194 | 30354484 | ID=Msa1285540;Name=Msa1285540 |
| chr8_3 | mRNA | 30354484 | 30361194 | 30354484 | ID=Msa1285540-mRNA-1;Parent=Msa1285540;Name=Msa1285540-mRNA-1;_AED=0.53;_eAED=0.53;_QI=271|0.16|0.28|0.42|0.83|0.71|7|0|194 |
| chr8_3 | exon | 30354484 | 30354586 | 30354484 | ID=Msa1285540-mRNA-1:exon:9903;Parent=Msa1285540-mRNA-1 |
| chr8_3 | exon | 30355338 | 30355378 | 30355338 | ID=Msa1285540-mRNA-1:exon:9902;Parent=Msa1285540-mRNA-1 |
| chr8_3 | exon | 30355739 | 30355886 | 30355739 | ID=Msa1285540-mRNA-1:exon:9901;Parent=Msa1285540-mRNA-1 |
| chr8_3 | exon | 30359193 | 30359284 | 30359193 | ID=Msa1285540-mRNA-1:exon:9900;Parent=Msa1285540-mRNA-1 |
| chr8_3 | exon | 30359363 | 30359459 | 30359363 | ID=Msa1285540-mRNA-1:exon:9899;Parent=Msa1285540-mRNA-1 |
| chr8_3 | exon | 30360465 | 30360585 | 30360465 | ID=Msa1285540-mRNA-1:exon:9898;Parent=Msa1285540-mRNA-1 |
| chr8_3 | exon | 30360941 | 30361194 | 30360941 | ID=Msa1285540-mRNA-1:exon:9897;Parent=Msa1285540-mRNA-1 |
| chr8_3 | five_prime_UTR | 30360941 | 30361194 | 30360941 | ID=Msa1285540-mRNA-1:five_prime_utr;Parent=Msa1285540-mRNA-1 |
| chr8_3 | five_prime_UTR | 30360569 | 30360585 | 30360569 | ID=Msa1285540-mRNA-1:five_prime_utr;Parent=Msa1285540-mRNA-1 |
| chr8_3 | CDS | 30360465 | 30360568 | 30360465 | ID=Msa1285540-mRNA-1:cds;Parent=Msa1285540-mRNA-1 |
| chr8_3 | CDS | 30359363 | 30359459 | 30359363 | ID=Msa1285540-mRNA-1:cds;Parent=Msa1285540-mRNA-1 |
| chr8_3 | CDS | 30359193 | 30359284 | 30359193 | ID=Msa1285540-mRNA-1:cds;Parent=Msa1285540-mRNA-1 |
| chr8_3 | CDS | 30355739 | 30355886 | 30355739 | ID=Msa1285540-mRNA-1:cds;Parent=Msa1285540-mRNA-1 |
| chr8_3 | CDS | 30355338 | 30355378 | 30355338 | ID=Msa1285540-mRNA-1:cds;Parent=Msa1285540-mRNA-1 |
| chr8_3 | CDS | 30354484 | 30354586 | 30354484 | ID=Msa1285540-mRNA-1:cds;Parent=Msa1285540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
