Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784300 | XP_003616649.1 | 93.103 | 145 | 10 | 0 | 1 | 145 | 87 | 231 | 1.36e-91 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784300 | G7K247 | 93.103 | 145 | 10 | 0 | 1 | 145 | 87 | 231 | 6.50e-92 | 276 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015400 | Msa0784300 | 0.830489 | 2.854326e-55 | -8.615850e-47 |
| Msa0604350 | Msa0784300 | 0.821739 | 3.439691e-53 | -8.615850e-47 |
| Msa0636170 | Msa0784300 | 0.810103 | 1.361615e-50 | -8.615850e-47 |
| Msa0645300 | Msa0784300 | 0.802702 | 4.949044e-49 | -8.615850e-47 |
| Msa0701010 | Msa0784300 | 0.827863 | 1.236608e-54 | -8.615850e-47 |
| Msa0725850 | Msa0784300 | 0.801525 | 8.642456e-49 | -8.615850e-47 |
| Msa0726140 | Msa0784300 | 0.828166 | 1.045665e-54 | -8.615850e-47 |
| Msa0729800 | Msa0784300 | 0.842016 | 3.345344e-58 | -8.615850e-47 |
| Msa0732540 | Msa0784300 | 0.827502 | 1.510014e-54 | -8.615850e-47 |
| Msa0733290 | Msa0784300 | 0.816415 | 5.595403e-52 | -8.615850e-47 |
| Msa0743810 | Msa0784300 | 0.820081 | 8.281409e-53 | -8.615850e-47 |
| Msa0745060 | Msa0784300 | 0.837934 | 3.877648e-57 | -8.615850e-47 |
| Msa0768290 | Msa0784300 | 0.814598 | 1.419791e-51 | -8.615850e-47 |
| Msa0768370 | Msa0784300 | 0.831791 | 1.365901e-55 | -8.615850e-47 |
| Msa0775300 | Msa0784300 | 0.807090 | 5.989628e-50 | -8.615850e-47 |
| Msa0783160 | Msa0784300 | 0.808406 | 3.146075e-50 | -8.615850e-47 |
| Msa0784290 | Msa0784300 | 0.925564 | 1.547283e-90 | -8.615850e-47 |
| Msa0784300 | Msa0808010 | 0.831847 | 1.323231e-55 | -8.615850e-47 |
| Msa0784300 | Msa0808020 | 0.826096 | 3.272602e-54 | -8.615850e-47 |
| Msa0784300 | Msa0811270 | 0.816517 | 5.310328e-52 | -8.615850e-47 |
| Msa0784300 | Msa0824590 | 0.831364 | 1.740484e-55 | -8.615850e-47 |
| Msa0784300 | Msa0824600 | 0.821475 | 3.958126e-53 | -8.615850e-47 |
| Msa0784300 | Msa0825860 | 0.835295 | 1.823549e-56 | -8.615850e-47 |
| Msa0784300 | Msa0833290 | 0.834160 | 3.519033e-56 | -8.615850e-47 |
| Msa0784300 | Msa0844490 | 0.832721 | 8.042236e-56 | -8.615850e-47 |
| Msa0784300 | Msa0846330 | 0.806112 | 9.634653e-50 | -8.615850e-47 |
| Msa0784300 | Msa0846350 | 0.815525 | 8.840074e-52 | -8.615850e-47 |
| Msa0784300 | Msa0848960 | 0.818968 | 1.486201e-52 | -8.615850e-47 |
| Msa0784300 | Msa0851390 | 0.809206 | 2.121370e-50 | -8.615850e-47 |
| Msa0784300 | Msa0858980 | 0.835589 | 1.536438e-56 | -8.615850e-47 |
| Msa0784300 | Msa0864070 | 0.838880 | 2.211197e-57 | -8.615850e-47 |
| Msa0784300 | Msa0865320 | 0.820365 | 7.127973e-53 | -8.615850e-47 |
| Msa0784300 | Msa0877250 | 0.823558 | 1.298665e-53 | -8.615850e-47 |
| Msa0784300 | Msa0888370 | 0.818250 | 2.162381e-52 | -8.615850e-47 |
| Msa0784300 | Msa0888420 | 0.839188 | 1.839410e-57 | -8.615850e-47 |
| Msa0784300 | Msa0899430 | 0.863310 | 2.727480e-64 | -8.615850e-47 |
| Msa0784300 | Msa0899450 | 0.869483 | 2.993940e-66 | -8.615850e-47 |
| Msa0784300 | Msa0907260 | 0.817155 | 3.818882e-52 | -8.615850e-47 |
| Msa0784300 | Msa0914760 | 0.848583 | 5.586970e-60 | -8.615850e-47 |
| Msa0784300 | Msa0927380 | 0.834443 | 2.989222e-56 | -8.615850e-47 |
| Msa0784300 | Msa0952720 | 0.832850 | 7.471355e-56 | -8.615850e-47 |
| Msa0784300 | Msa0953120 | 0.804735 | 1.873320e-49 | -8.615850e-47 |
| Msa0784300 | Msa0956270 | 0.802588 | 5.224787e-49 | -8.615850e-47 |
| Msa0784300 | Msa0958550 | 0.885650 | 6.768979e-72 | -8.615850e-47 |
| Msa0784300 | Msa0964900 | 0.851150 | 1.070574e-60 | -8.615850e-47 |
| Msa0784300 | Msa0974080 | 0.812515 | 4.078564e-51 | -8.615850e-47 |
| Msa0784300 | Msa0981370 | 0.816971 | 4.198769e-52 | -8.615850e-47 |
| Msa0784300 | Msa0989060 | 0.825815 | 3.815126e-54 | -8.615850e-47 |
| Msa0784300 | Msa1014540 | 0.816581 | 5.136470e-52 | -8.615850e-47 |
| Msa0784300 | Msa1016280 | 0.820885 | 5.415905e-53 | -8.615850e-47 |
| Msa0784300 | Msa1023050 | 0.818060 | 2.387180e-52 | -8.615850e-47 |
| Msa0784300 | Msa1024240 | 0.814983 | 1.166962e-51 | -8.615850e-47 |
| Msa0784300 | Msa1025360 | 0.834761 | 2.485815e-56 | -8.615850e-47 |
| Msa0784300 | Msa1025370 | 0.826731 | 2.309441e-54 | -8.615850e-47 |
| Msa0784300 | Msa1028230 | 0.811831 | 5.750951e-51 | -8.615850e-47 |
| Msa0784300 | Msa1044830 | 0.824298 | 8.707600e-54 | -8.615850e-47 |
| Msa0784300 | Msa1044840 | 0.834980 | 2.189869e-56 | -8.615850e-47 |
| Msa0784300 | Msa1092990 | 0.841479 | 4.633750e-58 | -8.615850e-47 |
| Msa0784300 | Msa1100980 | 0.815569 | 8.642087e-52 | -8.615850e-47 |
| Msa0784300 | Msa1109440 | 0.806431 | 8.254860e-50 | -8.615850e-47 |
| Msa0784300 | Msa1112300 | 0.805660 | 1.199021e-49 | -8.615850e-47 |
| Msa0784300 | Msa1117150 | 0.823242 | 1.538941e-53 | -8.615850e-47 |
| Msa0784300 | Msa1120610 | 0.818857 | 1.574770e-52 | -8.615850e-47 |
| Msa0784300 | Msa1121200 | 0.846877 | 1.648153e-59 | -8.615850e-47 |
| Msa0784300 | Msa1121480 | 0.829234 | 5.769886e-55 | -8.615850e-47 |
| Msa0784300 | Msa1121490 | 0.832081 | 1.158733e-55 | -8.615850e-47 |
| Msa0784300 | Msa1139680 | 0.812149 | 4.902544e-51 | -8.615850e-47 |
| Msa0784300 | Msa1150370 | 0.813472 | 2.515480e-51 | -8.615850e-47 |
| Msa0784300 | Msa1184420 | 0.816012 | 6.886094e-52 | -8.615850e-47 |
| Msa0784300 | Msa1192640 | 0.807684 | 4.482435e-50 | -8.615850e-47 |
| Msa0784300 | Msa1248300 | 0.802181 | 6.335979e-49 | -8.615850e-47 |
| Msa0784300 | Msa1248310 | 0.815556 | 8.700404e-52 | -8.615850e-47 |
| Msa0784300 | Msa1248370 | 0.811717 | 6.087667e-51 | -8.615850e-47 |
| Msa0784300 | Msa1269670 | 0.835361 | 1.754786e-56 | -8.615850e-47 |
| Msa0784300 | Msa1270230 | 0.826143 | 3.188968e-54 | -8.615850e-47 |
| Msa0784300 | Msa1270240 | 0.823521 | 1.324245e-53 | -8.615850e-47 |
| Msa0784300 | Msa1270270 | 0.802672 | 5.019891e-49 | -8.615850e-47 |
| Msa0784300 | Msa1283330 | 0.829172 | 5.974221e-55 | -8.615850e-47 |
| Msa0784300 | Msa1284680 | 0.812989 | 3.211014e-51 | -8.615850e-47 |
| Msa0784300 | Msa1285540 | 0.801447 | 8.963693e-49 | -8.615850e-47 |
| Msa0784300 | Msa1285930 | 0.815532 | 8.811436e-52 | -8.615850e-47 |
| Msa0784300 | Msa1286800 | 0.800209 | 1.604889e-48 | -8.615850e-47 |
| Msa0784300 | Msa1287800 | 0.814209 | 1.730790e-51 | -8.615850e-47 |
| Msa0784300 | Msa1287810 | 0.826439 | 2.710659e-54 | -8.615850e-47 |
| Msa0784300 | Msa1288560 | 0.827547 | 1.472827e-54 | -8.615850e-47 |
| Msa0784300 | Msa1289430 | 0.813829 | 2.099397e-51 | -8.615850e-47 |
| Msa0784300 | Msa1307890 | 0.835818 | 1.344844e-56 | -8.615850e-47 |
| Msa0784300 | Msa1320300 | 0.810943 | 8.965977e-51 | -8.615850e-47 |
| Msa0784300 | Msa1340590 | 0.820274 | 7.478854e-53 | -8.615850e-47 |
| Msa0784300 | Msa1344520 | 0.816646 | 4.966936e-52 | -8.615850e-47 |
| Msa0784300 | Msa1366810 | 0.805277 | 1.442454e-49 | -8.615850e-47 |
| Msa0784300 | Msa1369430 | 0.811884 | 5.598419e-51 | -8.615850e-47 |
| Msa0784300 | Msa1397580 | 0.816540 | 5.246285e-52 | -8.615850e-47 |
| Msa0784300 | Msa1402790 | 0.814215 | 1.725598e-51 | -8.615850e-47 |
| Msa0784300 | Msa1404000 | 0.825999 | 3.450199e-54 | -8.615850e-47 |
| Msa0784300 | Msa1410680 | 0.803327 | 3.676012e-49 | -8.615850e-47 |
| Msa0784300 | Msa1415310 | 0.808402 | 3.151607e-50 | -8.615850e-47 |
| Msa0784300 | Msa1422180 | 0.800975 | 1.119992e-48 | -8.615850e-47 |
| Msa0784300 | Msa1433120 | 0.832085 | 1.156040e-55 | -8.615850e-47 |
| Msa0784300 | Msa1451570 | 0.840110 | 1.059425e-57 | -8.615850e-47 |
| Msa0142220 | Msa0784300 | 0.815679 | 8.168349e-52 | -8.615850e-47 |
| Msa0200000 | Msa0784300 | 0.804887 | 1.740546e-49 | -8.615850e-47 |
| Msa0227480 | Msa0784300 | 0.807561 | 4.759736e-50 | -8.615850e-47 |
| Msa0232850 | Msa0784300 | 0.825529 | 4.460517e-54 | -8.615850e-47 |
| Msa0365500 | Msa0784300 | 0.805984 | 1.025190e-49 | -8.615850e-47 |
| Msa0371730 | Msa0784300 | 0.801902 | 7.233303e-49 | -8.615850e-47 |
| Msa0384890 | Msa0784300 | 0.835102 | 2.040179e-56 | -8.615850e-47 |
| Msa0414410 | Msa0784300 | 0.800850 | 1.187684e-48 | -8.615850e-47 |
| Msa0414420 | Msa0784300 | 0.811322 | 7.417611e-51 | -8.615850e-47 |
| Msa0424320 | Msa0784300 | 0.800024 | 1.749491e-48 | -8.615850e-47 |
| Msa0430420 | Msa0784300 | 0.802202 | 6.274112e-49 | -8.615850e-47 |
| Msa0436780 | Msa0784300 | 0.805347 | 1.394952e-49 | -8.615850e-47 |
| Msa0450000 | Msa0784300 | 0.835271 | 1.848913e-56 | -8.615850e-47 |
| Msa0452900 | Msa0784300 | 0.831416 | 1.689828e-55 | -8.615850e-47 |
| Msa0453120 | Msa0784300 | 0.813803 | 2.126985e-51 | -8.615850e-47 |
| Msa0479340 | Msa0784300 | 0.832975 | 6.954316e-56 | -8.615850e-47 |
| Msa0251320 | Msa0784300 | 0.823915 | 1.071286e-53 | -8.615850e-47 |
| Msa0267000 | Msa0784300 | 0.824622 | 7.306844e-54 | -8.615850e-47 |
| Msa0267010 | Msa0784300 | 0.826726 | 2.315438e-54 | -8.615850e-47 |
| Msa0273100 | Msa0784300 | 0.802166 | 6.382579e-49 | -8.615850e-47 |
| Msa0278110 | Msa0784300 | 0.800849 | 1.188228e-48 | -8.615850e-47 |
| Msa0290870 | Msa0784300 | 0.842643 | 2.280953e-58 | -8.615850e-47 |
| Msa0342750 | Msa0784300 | 0.806505 | 7.961999e-50 | -8.615850e-47 |
| Msa0360510 | Msa0784300 | 0.811400 | 7.134865e-51 | -8.615850e-47 |
| Msa0491590 | Msa0784300 | 0.825612 | 4.263804e-54 | -8.615850e-47 |
| Msa0501560 | Msa0784300 | 0.803250 | 3.812394e-49 | -8.615850e-47 |
| Msa0506270 | Msa0784300 | 0.800156 | 1.645220e-48 | -8.615850e-47 |
| Msa0523940 | Msa0784300 | 0.805774 | 1.134711e-49 | -8.615850e-47 |
| Msa0600700 | Msa0784300 | 0.802967 | 4.363662e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784300 | MtrunA17_Chr5g0437241 | 93.103 | 145 | 10 | 0 | 1 | 145 | 111 | 255 | 9.84e-95 | 275 |
| Msa0784300 | MtrunA17_Chr1g0181301 | 43.147 | 197 | 89 | 4 | 2 | 176 | 203 | 398 | 1.24e-44 | 151 |
| Msa0784300 | MtrunA17_Chr5g0415931 | 40.104 | 192 | 98 | 4 | 1 | 176 | 191 | 381 | 6.08e-36 | 128 |
| Msa0784300 | MtrunA17_Chr5g0437231 | 61.468 | 109 | 33 | 2 | 1 | 100 | 181 | 289 | 2.06e-34 | 122 |
| Msa0784300 | MtrunA17_Chr1g0208731 | 39.459 | 185 | 81 | 5 | 1 | 176 | 182 | 344 | 5.32e-30 | 112 |
| Msa0784300 | MtrunA17_Chr7g0247731 | 41.117 | 197 | 72 | 10 | 3 | 176 | 191 | 366 | 3.94e-26 | 102 |
| Msa0784300 | MtrunA17_Chr5g0415901 | 42.000 | 150 | 71 | 3 | 34 | 176 | 188 | 328 | 4.54e-26 | 101 |
| Msa0784300 | MtrunA17_Chr7g0246641 | 37.436 | 195 | 88 | 8 | 2 | 176 | 88 | 268 | 1.04e-24 | 96.7 |
| Msa0784300 | MtrunA17_Chr7g0247721 | 37.563 | 197 | 84 | 9 | 2 | 175 | 227 | 407 | 1.54e-24 | 98.6 |
| Msa0784300 | MtrunA17_Chr7g0247701 | 38.071 | 197 | 84 | 7 | 2 | 176 | 190 | 370 | 5.54e-24 | 96.7 |
| Msa0784300 | MtrunA17_Chr3g0143621 | 29.016 | 193 | 106 | 9 | 2 | 174 | 227 | 408 | 9.77e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 27 sgRNAs with CRISPR-Local
Find 33 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTAATCTCATTGGAAATT+TGG | 0.118149 | 5_2:-68833071 | None:intergenic |
| TAGCATTTGTTTAAACTTTC+CGG | 0.160572 | 5_2:-68832790 | None:intergenic |
| AGCAGCAGCCACCACCTTTC+TGG | 0.214961 | 5_2:+68833042 | Msa0784300:CDS |
| TTTATGGATGTTATGTTCTA+TGG | 0.218295 | 5_2:+68832552 | None:intergenic |
| GATAACTCCAAATCCATTTC+AGG | 0.313372 | 5_2:+68832638 | Msa0784300:CDS |
| ACTTGTGGTCCATTTCATAT+AGG | 0.341950 | 5_2:+68832957 | Msa0784300:CDS |
| GCTATGTCCTGAAATGGATT+TGG | 0.374010 | 5_2:-68832645 | None:intergenic |
| TGAAAAGCTATGTCCTGAAA+TGG | 0.396599 | 5_2:-68832651 | None:intergenic |
| GCAGCAGCCACCACCTTTCT+GGG | 0.398247 | 5_2:+68833043 | Msa0784300:CDS |
| CTTGTGGTCCATTTCATATA+GGG | 0.417934 | 5_2:+68832958 | Msa0784300:CDS |
| TTATATATCCCTATATGAAA+TGG | 0.424795 | 5_2:-68832966 | None:intergenic |
| CGAATTCAAACTTGTACACT+TGG | 0.434747 | 5_2:-68832758 | None:intergenic |
| TTATCTTGTGAAATCATTAG+AGG | 0.436221 | 5_2:+68832689 | Msa0784300:CDS |
| ATGCTAAAGCTTGAGAGTCT+TGG | 0.465110 | 5_2:+68832807 | Msa0784300:CDS |
| GTATCAGCTTCATACTTCTC+CGG | 0.473456 | 5_2:+68832870 | Msa0784300:CDS |
| GGGATATATAATGTAAGAGA+TGG | 0.535003 | 5_2:+68832978 | Msa0784300:CDS |
| ATGGATGTTATGTTCTATGG+AGG | 0.548376 | 5_2:+68832555 | Msa0784300:CDS |
| AAATTTGGTAAAACCCAGAA+AGG | 0.548520 | 5_2:-68833056 | None:intergenic |
| TTTGAATTCGATGCTCAGAC+CGG | 0.560810 | 5_2:+68832771 | Msa0784300:CDS |
| TATCTTGTGAAATCATTAGA+GGG | 0.568311 | 5_2:+68832690 | Msa0784300:CDS |
| GTGAAGATTATGATGATCAG+AGG | 0.588224 | 5_2:-68833003 | None:intergenic |
| GGTAAAACCCAGAAAGGTGG+TGG | 0.590899 | 5_2:-68833050 | None:intergenic |
| AAGTTAGATTGTGTAACTTG+TGG | 0.613074 | 5_2:+68832942 | Msa0784300:CDS |
| AATCATTAGAGGGAGACTTG+TGG | 0.640892 | 5_2:+68832700 | Msa0784300:CDS |
| TTTGGTAAAACCCAGAAAGG+TGG | 0.643098 | 5_2:-68833053 | None:intergenic |
| TATGTTGCGAGTAAATATCA+CGG | 0.663367 | 5_2:+68832585 | Msa0784300:CDS |
| ATTAGAGGGAGACTTGTGGA+TGG | 0.690554 | 5_2:+68832704 | Msa0784300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATATCCCTATATGAAA+TGG | - | chr5_2:68832969-68832988 | None:intergenic | 20.0% |
| !! | GGTATAGTATCTTTTAATCT+TGG | + | chr5_2:68832606-68832625 | Msa0784300:CDS | 25.0% |
| ! | TTATCTTGTGAAATCATTAG+AGG | + | chr5_2:68832689-68832708 | Msa0784300:CDS | 25.0% |
| ! | TATCTTGTGAAATCATTAGA+GGG | + | chr5_2:68832690-68832709 | Msa0784300:CDS | 25.0% |
| ! | TAGCATTTGTTTAAACTTTC+CGG | - | chr5_2:68832793-68832812 | None:intergenic | 25.0% |
| TATGTTGCGAGTAAATATCA+CGG | + | chr5_2:68832585-68832604 | Msa0784300:CDS | 30.0% | |
| ! | CTTTTAATCTTGGTCATAAG+AGG | + | chr5_2:68832616-68832635 | Msa0784300:CDS | 30.0% |
| !! | TGGAGACAATGTTTTATTCT+TGG | + | chr5_2:68832827-68832846 | Msa0784300:CDS | 30.0% |
| !! | GGAGACAATGTTTTATTCTT+GGG | + | chr5_2:68832828-68832847 | Msa0784300:CDS | 30.0% |
| !!! | TGAATCTTTTTTCAGACAAC+CGG | - | chr5_2:68832892-68832911 | None:intergenic | 30.0% |
| AAGTTAGATTGTGTAACTTG+TGG | + | chr5_2:68832942-68832961 | Msa0784300:CDS | 30.0% | |
| GGGATATATAATGTAAGAGA+TGG | + | chr5_2:68832978-68832997 | Msa0784300:CDS | 30.0% | |
| AAATTTGGTAAAACCCAGAA+AGG | - | chr5_2:68833059-68833078 | None:intergenic | 30.0% | |
| ATGGATGTTATGTTCTATGG+AGG | + | chr5_2:68832555-68832574 | Msa0784300:CDS | 35.0% | |
| GATAACTCCAAATCCATTTC+AGG | + | chr5_2:68832638-68832657 | Msa0784300:CDS | 35.0% | |
| TGAAAAGCTATGTCCTGAAA+TGG | - | chr5_2:68832654-68832673 | None:intergenic | 35.0% | |
| ! | TTTCAGGACATAGCTTTTCA+TGG | + | chr5_2:68832654-68832673 | Msa0784300:CDS | 35.0% |
| ! | GCTTTTCATGGAAGGTTTAA+AGG | + | chr5_2:68832666-68832685 | Msa0784300:CDS | 35.0% |
| CGAATTCAAACTTGTACACT+TGG | - | chr5_2:68832761-68832780 | None:intergenic | 35.0% | |
| ACTTGTGGTCCATTTCATAT+AGG | + | chr5_2:68832957-68832976 | Msa0784300:CDS | 35.0% | |
| CTTGTGGTCCATTTCATATA+GGG | + | chr5_2:68832958-68832977 | Msa0784300:CDS | 35.0% | |
| GTGAAGATTATGATGATCAG+AGG | - | chr5_2:68833006-68833025 | None:intergenic | 35.0% | |
| ! | GCTATGTCCTGAAATGGATT+TGG | - | chr5_2:68832648-68832667 | None:intergenic | 40.0% |
| ! | AGGACATAGCTTTTCATGGA+AGG | + | chr5_2:68832658-68832677 | Msa0784300:CDS | 40.0% |
| AATCATTAGAGGGAGACTTG+TGG | + | chr5_2:68832700-68832719 | Msa0784300:CDS | 40.0% | |
| TTTGAATTCGATGCTCAGAC+CGG | + | chr5_2:68832771-68832790 | Msa0784300:CDS | 40.0% | |
| ATGCTAAAGCTTGAGAGTCT+TGG | + | chr5_2:68832807-68832826 | Msa0784300:CDS | 40.0% | |
| GTATCAGCTTCATACTTCTC+CGG | + | chr5_2:68832870-68832889 | Msa0784300:CDS | 40.0% | |
| TTTGGTAAAACCCAGAAAGG+TGG | - | chr5_2:68833056-68833075 | None:intergenic | 40.0% | |
| ATTAGAGGGAGACTTGTGGA+TGG | + | chr5_2:68832704-68832723 | Msa0784300:CDS | 45.0% | |
| GGTAAAACCCAGAAAGGTGG+TGG | - | chr5_2:68833053-68833072 | None:intergenic | 50.0% | |
| AGCAGCAGCCACCACCTTTC+TGG | + | chr5_2:68833042-68833061 | Msa0784300:CDS | 60.0% | |
| GCAGCAGCCACCACCTTTCT+GGG | + | chr5_2:68833043-68833062 | Msa0784300:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 68832555 | 68833085 | 68832555 | ID=Msa0784300;Name=Msa0784300 |
| chr5_2 | mRNA | 68832555 | 68833085 | 68832555 | ID=Msa0784300-mRNA-1;Parent=Msa0784300;Name=Msa0784300-mRNA-1;_AED=0.89;_eAED=0.89;_QI=0|-1|0|1|-1|1|1|0|176 |
| chr5_2 | exon | 68832555 | 68833085 | 68832555 | ID=Msa0784300-mRNA-1:exon:20666;Parent=Msa0784300-mRNA-1 |
| chr5_2 | CDS | 68832555 | 68833085 | 68832555 | ID=Msa0784300-mRNA-1:cds;Parent=Msa0784300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
