Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784290 | RHN57146.1 | 91.765 | 255 | 21 | 0 | 74 | 328 | 1 | 255 | 2.22e-169 | 482 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784290 | A0A396HUX2 | 91.765 | 255 | 21 | 0 | 74 | 328 | 1 | 255 | 1.06e-169 | 482 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015400 | Msa0784290 | 0.822720 | 2.037358e-53 | -8.615850e-47 |
| Msa0062860 | Msa0784290 | 0.801189 | 1.012342e-48 | -8.615850e-47 |
| Msa0090320 | Msa0784290 | 0.800179 | 1.627092e-48 | -8.615850e-47 |
| Msa0102070 | Msa0784290 | 0.808906 | 2.460353e-50 | -8.615850e-47 |
| Msa0105070 | Msa0784290 | 0.809688 | 1.671792e-50 | -8.615850e-47 |
| Msa0604350 | Msa0784290 | 0.814514 | 1.481936e-51 | -8.615850e-47 |
| Msa0632740 | Msa0784290 | 0.801667 | 8.080183e-49 | -8.615850e-47 |
| Msa0636170 | Msa0784290 | 0.816220 | 6.186075e-52 | -8.615850e-47 |
| Msa0639610 | Msa0784290 | 0.814693 | 1.352690e-51 | -8.615850e-47 |
| Msa0645300 | Msa0784290 | 0.827199 | 1.785184e-54 | -8.615850e-47 |
| Msa0650630 | Msa0784290 | 0.812163 | 4.868793e-51 | -8.615850e-47 |
| Msa0694370 | Msa0784290 | 0.811046 | 8.515757e-51 | -8.615850e-47 |
| Msa0701010 | Msa0784290 | 0.823916 | 1.070387e-53 | -8.615850e-47 |
| Msa0718100 | Msa0784290 | 0.801522 | 8.652393e-49 | -8.615850e-47 |
| Msa0725850 | Msa0784290 | 0.847017 | 1.509057e-59 | -8.615850e-47 |
| Msa0726140 | Msa0784290 | 0.829174 | 5.964940e-55 | -8.615850e-47 |
| Msa0729800 | Msa0784290 | 0.817916 | 2.572960e-52 | -8.615850e-47 |
| Msa0732540 | Msa0784290 | 0.831252 | 1.854930e-55 | -8.615850e-47 |
| Msa0733290 | Msa0784290 | 0.802195 | 6.294025e-49 | -8.615850e-47 |
| Msa0743810 | Msa0784290 | 0.843640 | 1.237209e-58 | -8.615850e-47 |
| Msa0745060 | Msa0784290 | 0.841966 | 3.448218e-58 | -8.615850e-47 |
| Msa0748970 | Msa0784290 | 0.808826 | 2.558494e-50 | -8.615850e-47 |
| Msa0760130 | Msa0784290 | 0.803514 | 3.361512e-49 | -8.615850e-47 |
| Msa0768290 | Msa0784290 | 0.828983 | 6.635563e-55 | -8.615850e-47 |
| Msa0768370 | Msa0784290 | 0.842553 | 2.410669e-58 | -8.615850e-47 |
| Msa0777870 | Msa0784290 | 0.804853 | 1.769496e-49 | -8.615850e-47 |
| Msa0783160 | Msa0784290 | 0.810693 | 1.015436e-50 | -8.615850e-47 |
| Msa0784290 | Msa0784300 | 0.925564 | 1.547283e-90 | -8.615850e-47 |
| Msa0784290 | Msa0808010 | 0.841365 | 4.966705e-58 | -8.615850e-47 |
| Msa0784290 | Msa0808020 | 0.831999 | 1.214186e-55 | -8.615850e-47 |
| Msa0784290 | Msa0811270 | 0.832526 | 8.992382e-56 | -8.615850e-47 |
| Msa0784290 | Msa0820850 | 0.828003 | 1.144300e-54 | -8.615850e-47 |
| Msa0784290 | Msa0824590 | 0.839309 | 1.711630e-57 | -8.615850e-47 |
| Msa0784290 | Msa0824600 | 0.821206 | 4.566658e-53 | -8.615850e-47 |
| Msa0784290 | Msa0825860 | 0.841445 | 4.732165e-58 | -8.615850e-47 |
| Msa0784290 | Msa0832340 | 0.801736 | 7.822440e-49 | -8.615850e-47 |
| Msa0784290 | Msa0833290 | 0.830117 | 3.518723e-55 | -8.615850e-47 |
| Msa0784290 | Msa0844490 | 0.839179 | 1.849995e-57 | -8.615850e-47 |
| Msa0784290 | Msa0844500 | 0.840004 | 1.128632e-57 | -8.615850e-47 |
| Msa0784290 | Msa0845930 | 0.833654 | 4.709842e-56 | -8.615850e-47 |
| Msa0784290 | Msa0846330 | 0.835248 | 1.874356e-56 | -8.615850e-47 |
| Msa0784290 | Msa0846350 | 0.816961 | 4.221547e-52 | -8.615850e-47 |
| Msa0784290 | Msa0848960 | 0.804950 | 1.688722e-49 | -8.615850e-47 |
| Msa0784290 | Msa0858980 | 0.849492 | 3.124051e-60 | -8.615850e-47 |
| Msa0784290 | Msa0861130 | 0.824815 | 6.580572e-54 | -8.615850e-47 |
| Msa0784290 | Msa0864070 | 0.858275 | 9.211460e-63 | -8.615850e-47 |
| Msa0784290 | Msa0865320 | 0.821657 | 3.594440e-53 | -8.615850e-47 |
| Msa0784290 | Msa0877250 | 0.833193 | 6.138787e-56 | -8.615850e-47 |
| Msa0784290 | Msa0888370 | 0.820363 | 7.136192e-53 | -8.615850e-47 |
| Msa0784290 | Msa0888420 | 0.843120 | 1.703564e-58 | -8.615850e-47 |
| Msa0784290 | Msa0898080 | 0.801762 | 7.725361e-49 | -8.615850e-47 |
| Msa0784290 | Msa0899430 | 0.872342 | 3.424575e-67 | -8.615850e-47 |
| Msa0784290 | Msa0899450 | 0.880612 | 4.756742e-70 | -8.615850e-47 |
| Msa0784290 | Msa0901070 | 0.806019 | 1.007913e-49 | -8.615850e-47 |
| Msa0784290 | Msa0907070 | 0.805189 | 1.505019e-49 | -8.615850e-47 |
| Msa0784290 | Msa0907260 | 0.800666 | 1.294934e-48 | -8.615850e-47 |
| Msa0784290 | Msa0914760 | 0.855811 | 4.911524e-62 | -8.615850e-47 |
| Msa0784290 | Msa0927380 | 0.849802 | 2.559220e-60 | -8.615850e-47 |
| Msa0784290 | Msa0936300 | 0.818178 | 2.244175e-52 | -8.615850e-47 |
| Msa0784290 | Msa0952720 | 0.834144 | 3.552002e-56 | -8.615850e-47 |
| Msa0784290 | Msa0953120 | 0.810618 | 1.054155e-50 | -8.615850e-47 |
| Msa0784290 | Msa0954910 | 0.826159 | 3.161322e-54 | -8.615850e-47 |
| Msa0784290 | Msa0957860 | 0.830667 | 2.581576e-55 | -8.615850e-47 |
| Msa0784290 | Msa0957960 | 0.830498 | 2.838785e-55 | -8.615850e-47 |
| Msa0784290 | Msa0958550 | 0.891358 | 4.271690e-74 | -8.615850e-47 |
| Msa0784290 | Msa0964900 | 0.871912 | 4.760199e-67 | -8.615850e-47 |
| Msa0784290 | Msa0966750 | 0.800909 | 1.155215e-48 | -8.615850e-47 |
| Msa0784290 | Msa0973100 | 0.829374 | 5.336270e-55 | -8.615850e-47 |
| Msa0784290 | Msa0974080 | 0.802462 | 5.545541e-49 | -8.615850e-47 |
| Msa0784290 | Msa0976670 | 0.801362 | 9.333171e-49 | -8.615850e-47 |
| Msa0784290 | Msa0980200 | 0.807266 | 5.496580e-50 | -8.615850e-47 |
| Msa0784290 | Msa0981370 | 0.822131 | 2.791008e-53 | -8.615850e-47 |
| Msa0784290 | Msa0989060 | 0.833562 | 4.965791e-56 | -8.615850e-47 |
| Msa0784290 | Msa0999220 | 0.802681 | 4.998589e-49 | -8.615850e-47 |
| Msa0784290 | Msa1000900 | 0.807456 | 5.009539e-50 | -8.615850e-47 |
| Msa0784290 | Msa1002810 | 0.800737 | 1.252191e-48 | -8.615850e-47 |
| Msa0784290 | Msa1014540 | 0.820935 | 5.274118e-53 | -8.615850e-47 |
| Msa0784290 | Msa1016280 | 0.828034 | 1.125149e-54 | -8.615850e-47 |
| Msa0784290 | Msa1023050 | 0.815309 | 9.874193e-52 | -8.615850e-47 |
| Msa0784290 | Msa1024240 | 0.810495 | 1.120340e-50 | -8.615850e-47 |
| Msa0784290 | Msa1025360 | 0.851910 | 6.522039e-61 | -8.615850e-47 |
| Msa0784290 | Msa1025370 | 0.843573 | 1.289676e-58 | -8.615850e-47 |
| Msa0784290 | Msa1028230 | 0.832719 | 8.052756e-56 | -8.615850e-47 |
| Msa0784290 | Msa1044830 | 0.842969 | 1.868599e-58 | -8.615850e-47 |
| Msa0784290 | Msa1044840 | 0.853305 | 2.608465e-61 | -8.615850e-47 |
| Msa0784290 | Msa1057920 | 0.815869 | 7.409560e-52 | -8.615850e-47 |
| Msa0784290 | Msa1060840 | 0.848304 | 6.674258e-60 | -8.615850e-47 |
| Msa0784290 | Msa1069220 | 0.803400 | 3.549694e-49 | -8.615850e-47 |
| Msa0784290 | Msa1075540 | 0.802830 | 4.657816e-49 | -8.615850e-47 |
| Msa0784290 | Msa1083840 | 0.805696 | 1.178573e-49 | -8.615850e-47 |
| Msa0784290 | Msa1085740 | 0.801760 | 7.735787e-49 | -8.615850e-47 |
| Msa0784290 | Msa1092990 | 0.847179 | 1.362466e-59 | -8.615850e-47 |
| Msa0784290 | Msa1099970 | 0.823754 | 1.168086e-53 | -8.615850e-47 |
| Msa0784290 | Msa1100980 | 0.833748 | 4.462211e-56 | -8.615850e-47 |
| Msa0784290 | Msa1109440 | 0.811161 | 8.041926e-51 | -8.615850e-47 |
| Msa0784290 | Msa1112300 | 0.824515 | 7.741382e-54 | -8.615850e-47 |
| Msa0784290 | Msa1114030 | 0.817368 | 3.418796e-52 | -8.615850e-47 |
| Msa0784290 | Msa1117150 | 0.811140 | 8.126279e-51 | -8.615850e-47 |
| Msa0784290 | Msa1120610 | 0.808111 | 3.635625e-50 | -8.615850e-47 |
| Msa0784290 | Msa1121200 | 0.843362 | 1.467948e-58 | -8.615850e-47 |
| Msa0784290 | Msa1121480 | 0.831478 | 1.631783e-55 | -8.615850e-47 |
| Msa0784290 | Msa1121490 | 0.838428 | 2.893545e-57 | -8.615850e-47 |
| Msa0784290 | Msa1135740 | 0.811411 | 7.096769e-51 | -8.615850e-47 |
| Msa0784290 | Msa1139680 | 0.810809 | 9.582564e-51 | -8.615850e-47 |
| Msa0784290 | Msa1149360 | 0.804590 | 2.008097e-49 | -8.615850e-47 |
| Msa0784290 | Msa1150370 | 0.830037 | 3.680560e-55 | -8.615850e-47 |
| Msa0784290 | Msa1173920 | 0.815981 | 6.997937e-52 | -8.615850e-47 |
| Msa0784290 | Msa1181800 | 0.814071 | 1.856545e-51 | -8.615850e-47 |
| Msa0784290 | Msa1184420 | 0.819063 | 1.413484e-52 | -8.615850e-47 |
| Msa0784290 | Msa1187940 | 0.803441 | 3.481641e-49 | -8.615850e-47 |
| Msa0784290 | Msa1187950 | 0.818553 | 1.846062e-52 | -8.615850e-47 |
| Msa0784290 | Msa1192640 | 0.814359 | 1.603773e-51 | -8.615850e-47 |
| Msa0784290 | Msa1241010 | 0.811707 | 6.119857e-51 | -8.615850e-47 |
| Msa0784290 | Msa1246880 | 0.802118 | 6.530241e-49 | -8.615850e-47 |
| Msa0784290 | Msa1248310 | 0.824988 | 5.988582e-54 | -8.615850e-47 |
| Msa0784290 | Msa1248370 | 0.831250 | 1.856861e-55 | -8.615850e-47 |
| Msa0784290 | Msa1269670 | 0.838186 | 3.338781e-57 | -8.615850e-47 |
| Msa0784290 | Msa1270230 | 0.843321 | 1.505636e-58 | -8.615850e-47 |
| Msa0784290 | Msa1270240 | 0.828927 | 6.846000e-55 | -8.615850e-47 |
| Msa0784290 | Msa1270270 | 0.812374 | 4.378331e-51 | -8.615850e-47 |
| Msa0784290 | Msa1277660 | 0.801423 | 9.069742e-49 | -8.615850e-47 |
| Msa0784290 | Msa1283330 | 0.854917 | 8.941363e-62 | -8.615850e-47 |
| Msa0784290 | Msa1284680 | 0.821230 | 4.508791e-53 | -8.615850e-47 |
| Msa0784290 | Msa1285540 | 0.806385 | 8.439044e-50 | -8.615850e-47 |
| Msa0784290 | Msa1285930 | 0.823291 | 1.499283e-53 | -8.615850e-47 |
| Msa0784290 | Msa1286800 | 0.816854 | 4.462020e-52 | -8.615850e-47 |
| Msa0784290 | Msa1287800 | 0.824035 | 1.003703e-53 | -8.615850e-47 |
| Msa0784290 | Msa1287810 | 0.834742 | 2.513621e-56 | -8.615850e-47 |
| Msa0784290 | Msa1288560 | 0.846321 | 2.337529e-59 | -8.615850e-47 |
| Msa0784290 | Msa1289430 | 0.822171 | 2.732312e-53 | -8.615850e-47 |
| Msa0784290 | Msa1307890 | 0.856066 | 4.134459e-62 | -8.615850e-47 |
| Msa0784290 | Msa1314280 | 0.807441 | 5.047714e-50 | -8.615850e-47 |
| Msa0784290 | Msa1320300 | 0.813104 | 3.030410e-51 | -8.615850e-47 |
| Msa0784290 | Msa1321560 | 0.804207 | 2.412952e-49 | -8.615850e-47 |
| Msa0784290 | Msa1340590 | 0.806678 | 7.321979e-50 | -8.615850e-47 |
| Msa0784290 | Msa1344520 | 0.814669 | 1.369556e-51 | -8.615850e-47 |
| Msa0784290 | Msa1366810 | 0.801168 | 1.022607e-48 | -8.615850e-47 |
| Msa0784290 | Msa1369430 | 0.817006 | 4.125460e-52 | -8.615850e-47 |
| Msa0784290 | Msa1386330 | 0.845271 | 4.505952e-59 | -8.615850e-47 |
| Msa0784290 | Msa1387280 | 0.814232 | 1.711239e-51 | -8.615850e-47 |
| Msa0784290 | Msa1397580 | 0.816512 | 5.323039e-52 | -8.615850e-47 |
| Msa0784290 | Msa1402790 | 0.812448 | 4.217562e-51 | -8.615850e-47 |
| Msa0784290 | Msa1404000 | 0.840183 | 1.013632e-57 | -8.615850e-47 |
| Msa0784290 | Msa1410680 | 0.814608 | 1.413117e-51 | -8.615850e-47 |
| Msa0784290 | Msa1415310 | 0.823365 | 1.440808e-53 | -8.615850e-47 |
| Msa0784290 | Msa1420820 | 0.817940 | 2.540191e-52 | -8.615850e-47 |
| Msa0784290 | Msa1422180 | 0.806099 | 9.697374e-50 | -8.615850e-47 |
| Msa0784290 | Msa1427230 | 0.801088 | 1.062082e-48 | -8.615850e-47 |
| Msa0784290 | Msa1433120 | 0.827586 | 1.441984e-54 | -8.615850e-47 |
| Msa0784290 | Msa1451570 | 0.837728 | 4.379897e-57 | -8.615850e-47 |
| Msa0784290 | Msa1460830 | 0.806233 | 9.084794e-50 | -8.615850e-47 |
| Msa0127800 | Msa0784290 | 0.800230 | 1.588678e-48 | -8.615850e-47 |
| Msa0135660 | Msa0784290 | 0.802799 | 4.727075e-49 | -8.615850e-47 |
| Msa0142220 | Msa0784290 | 0.813327 | 2.706933e-51 | -8.615850e-47 |
| Msa0145750 | Msa0784290 | 0.806891 | 6.598681e-50 | -8.615850e-47 |
| Msa0182740 | Msa0784290 | 0.800366 | 1.490677e-48 | -8.615850e-47 |
| Msa0197010 | Msa0784290 | 0.821716 | 3.483105e-53 | -8.615850e-47 |
| Msa0208090 | Msa0784290 | 0.828779 | 7.437432e-55 | -8.615850e-47 |
| Msa0227480 | Msa0784290 | 0.823868 | 1.098690e-53 | -8.615850e-47 |
| Msa0232850 | Msa0784290 | 0.843720 | 1.178022e-58 | -8.615850e-47 |
| Msa0233300 | Msa0784290 | 0.823569 | 1.290851e-53 | -8.615850e-47 |
| Msa0365500 | Msa0784290 | 0.849498 | 3.110987e-60 | -8.615850e-47 |
| Msa0371730 | Msa0784290 | 0.830787 | 2.412830e-55 | -8.615850e-47 |
| Msa0384800 | Msa0784290 | 0.810980 | 8.800377e-51 | -8.615850e-47 |
| Msa0384890 | Msa0784290 | 0.831332 | 1.772232e-55 | -8.615850e-47 |
| Msa0394970 | Msa0784290 | 0.805490 | 1.301902e-49 | -8.615850e-47 |
| Msa0414410 | Msa0784290 | 0.815016 | 1.147236e-51 | -8.615850e-47 |
| Msa0414420 | Msa0784290 | 0.826360 | 2.831087e-54 | -8.615850e-47 |
| Msa0423020 | Msa0784290 | 0.800427 | 1.448734e-48 | -8.615850e-47 |
| Msa0424320 | Msa0784290 | 0.800263 | 1.564722e-48 | -8.615850e-47 |
| Msa0434200 | Msa0784290 | 0.816409 | 5.612539e-52 | -8.615850e-47 |
| Msa0435230 | Msa0784290 | 0.827964 | 1.169251e-54 | -8.615850e-47 |
| Msa0436780 | Msa0784290 | 0.835128 | 2.009389e-56 | -8.615850e-47 |
| Msa0436800 | Msa0784290 | 0.815284 | 1.000070e-51 | -8.615850e-47 |
| Msa0450000 | Msa0784290 | 0.834765 | 2.479905e-56 | -8.615850e-47 |
| Msa0452900 | Msa0784290 | 0.835064 | 2.085301e-56 | -8.615850e-47 |
| Msa0453120 | Msa0784290 | 0.823998 | 1.024150e-53 | -8.615850e-47 |
| Msa0459160 | Msa0784290 | 0.820971 | 5.173921e-53 | -8.615850e-47 |
| Msa0466120 | Msa0784290 | 0.815214 | 1.036655e-51 | -8.615850e-47 |
| Msa0471380 | Msa0784290 | 0.803670 | 3.121037e-49 | -8.615850e-47 |
| Msa0479340 | Msa0784290 | 0.845350 | 4.289072e-59 | -8.615850e-47 |
| Msa0251320 | Msa0784290 | 0.862285 | 5.646000e-64 | -8.615850e-47 |
| Msa0251640 | Msa0784290 | 0.817286 | 3.568647e-52 | -8.615850e-47 |
| Msa0267000 | Msa0784290 | 0.840543 | 8.164500e-58 | -8.615850e-47 |
| Msa0267010 | Msa0784290 | 0.844945 | 5.518573e-59 | -8.615850e-47 |
| Msa0270520 | Msa0784290 | 0.822944 | 1.806249e-53 | -8.615850e-47 |
| Msa0276570 | Msa0784290 | 0.808642 | 2.802099e-50 | -8.615850e-47 |
| Msa0290870 | Msa0784290 | 0.833421 | 5.385242e-56 | -8.615850e-47 |
| Msa0307540 | Msa0784290 | 0.811083 | 8.357742e-51 | -8.615850e-47 |
| Msa0311750 | Msa0784290 | 0.802271 | 6.073136e-49 | -8.615850e-47 |
| Msa0337900 | Msa0784290 | 0.807501 | 4.900964e-50 | -8.615850e-47 |
| Msa0339620 | Msa0784290 | 0.803234 | 3.841966e-49 | -8.615850e-47 |
| Msa0342240 | Msa0784290 | 0.802546 | 5.328972e-49 | -8.615850e-47 |
| Msa0342750 | Msa0784290 | 0.814979 | 1.168842e-51 | -8.615850e-47 |
| Msa0360510 | Msa0784290 | 0.822442 | 2.364309e-53 | -8.615850e-47 |
| Msa0491590 | Msa0784290 | 0.809210 | 2.117748e-50 | -8.615850e-47 |
| Msa0501560 | Msa0784290 | 0.819729 | 9.964892e-53 | -8.615850e-47 |
| Msa0505080 | Msa0784290 | 0.813357 | 2.666894e-51 | -8.615850e-47 |
| Msa0506270 | Msa0784290 | 0.828624 | 8.107379e-55 | -8.615850e-47 |
| Msa0514900 | Msa0784290 | 0.811162 | 8.034794e-51 | -8.615850e-47 |
| Msa0523940 | Msa0784290 | 0.811964 | 5.378343e-51 | -8.615850e-47 |
| Msa0545700 | Msa0784290 | 0.811118 | 8.212765e-51 | -8.615850e-47 |
| Msa0564890 | Msa0784290 | 0.812998 | 3.197043e-51 | -8.615850e-47 |
| Msa0585230 | Msa0784290 | 0.813714 | 2.225501e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784290 | MtrunA17_Chr5g0437241 | 91.765 | 255 | 21 | 0 | 74 | 328 | 1 | 255 | 2.04e-173 | 482 |
| Msa0784290 | MtrunA17_Chr5g0437231 | 63.946 | 294 | 92 | 5 | 1 | 284 | 1 | 290 | 1.43e-120 | 350 |
| Msa0784290 | MtrunA17_Chr5g0415931 | 45.692 | 383 | 180 | 10 | 1 | 359 | 3 | 381 | 7.06e-103 | 308 |
| Msa0784290 | MtrunA17_Chr1g0181301 | 43.781 | 402 | 179 | 10 | 1 | 359 | 1 | 398 | 4.32e-101 | 304 |
| Msa0784290 | MtrunA17_Chr5g0415901 | 43.316 | 374 | 151 | 9 | 1 | 359 | 1 | 328 | 8.15e-90 | 273 |
| Msa0784290 | MtrunA17_Chr1g0208731 | 42.627 | 373 | 164 | 10 | 4 | 359 | 5 | 344 | 1.08e-84 | 260 |
| Msa0784290 | MtrunA17_Chr7g0247701 | 41.414 | 396 | 166 | 14 | 2 | 359 | 3 | 370 | 2.55e-75 | 238 |
| Msa0784290 | MtrunA17_Chr7g0247731 | 41.646 | 401 | 152 | 18 | 3 | 359 | 4 | 366 | 2.35e-74 | 234 |
| Msa0784290 | MtrunA17_Chr7g0247721 | 40.796 | 402 | 158 | 17 | 2 | 358 | 41 | 407 | 4.05e-72 | 230 |
| Msa0784290 | MtrunA17_Chr1g0151451 | 44.560 | 193 | 70 | 6 | 4 | 174 | 5 | 182 | 1.65e-43 | 150 |
| Msa0784290 | MtrunA17_Chr7g0246641 | 38.983 | 295 | 132 | 13 | 86 | 359 | 1 | 268 | 3.95e-43 | 150 |
| Msa0784290 | MtrunA17_Chr3g0143621 | 25.735 | 408 | 233 | 16 | 1 | 357 | 20 | 408 | 3.19e-20 | 91.3 |
| Msa0784290 | MtrunA17_Chr7g0246651 | 33.679 | 193 | 98 | 8 | 73 | 245 | 29 | 211 | 1.26e-18 | 83.6 |
| Msa0784290 | MtrunA17_Chr3g0143611 | 26.289 | 388 | 220 | 22 | 1 | 357 | 1 | 353 | 1.52e-16 | 79.7 |
| Msa0784290 | MtrunA17_Chr3g0088531 | 26.368 | 201 | 136 | 6 | 154 | 354 | 184 | 372 | 6.25e-11 | 63.2 |
| Msa0784290 | MtrunA17_Chr7g0246661 | 30.952 | 126 | 62 | 4 | 163 | 267 | 8 | 129 | 8.74e-11 | 59.3 |
| Msa0784290 | MtrunA17_Chr6g0459631 | 44.304 | 79 | 41 | 2 | 133 | 211 | 75 | 150 | 9.39e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 70 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTAATCTCATTGGAAATT+TGG | 0.120632 | 5_2:-68830810 | None:intergenic |
| GGAACTAGATTGGGCAAATT+TGG | 0.170985 | 5_2:+68829747 | Msa0784290:CDS |
| TAGCATTTGTTTAAAATTTC+CGG | 0.173834 | 5_2:-68830529 | None:intergenic |
| TAAGAATTTGGCAATTTAAA+TGG | 0.183830 | 5_2:-68829970 | None:intergenic |
| TAATCATTTGGTCTTGTTAT+AGG | 0.187600 | 5_2:-68830165 | None:intergenic |
| TACAAACATCTTTCTGTTCT+TGG | 0.199967 | 5_2:-68829922 | None:intergenic |
| GAGCTGGAGTCATTCCTTTA+TGG | 0.214315 | 5_2:+68830275 | Msa0784290:CDS |
| AGCAGCAGCCACCACCTTTC+TGG | 0.214961 | 5_2:+68830781 | Msa0784290:CDS |
| TTTATGGATGTTATGTTCTA+TGG | 0.218295 | 5_2:+68830291 | Msa0784290:CDS |
| CAAATATGGTAATAAGAATT+TGG | 0.251801 | 5_2:-68829982 | None:intergenic |
| CAAATAGATCACATTTGTTT+TGG | 0.278174 | 5_2:+68829811 | Msa0784290:CDS |
| GGCTAAATCCACAACAAATA+TGG | 0.289458 | 5_2:-68829996 | None:intergenic |
| AATCATTTGGTCTTGTTATA+GGG | 0.294407 | 5_2:-68830164 | None:intergenic |
| AACAAGACCAAATGATTATA+TGG | 0.314220 | 5_2:+68830170 | Msa0784290:CDS |
| ACTTGTGGTCCATTTCATAT+AGG | 0.341950 | 5_2:+68830696 | Msa0784290:CDS |
| GCTATGTCCTGAATTGGATT+TGG | 0.346401 | 5_2:-68830384 | None:intergenic |
| TTCTAAACCGCTGATCTTGA+TGG | 0.357058 | 5_2:-68829873 | None:intergenic |
| TGAAAAGCTATGTCCTGAAT+TGG | 0.358033 | 5_2:-68830390 | None:intergenic |
| GATAACTCCAAATCCAATTC+AGG | 0.366133 | 5_2:+68830377 | Msa0784290:CDS |
| TCGAGGGTTGGAAGACTAAT+AGG | 0.372920 | 5_2:-68830087 | None:intergenic |
| ACAAACATCTTTCTGTTCTT+GGG | 0.381418 | 5_2:-68829921 | None:intergenic |
| GCAGCAGCCACCACCTTTCT+GGG | 0.398247 | 5_2:+68830782 | Msa0784290:CDS |
| GCCGCAACCATATAATCATT+TGG | 0.404338 | 5_2:-68830177 | None:intergenic |
| GCAATTCACACTAGCATTCA+TGG | 0.409604 | 5_2:+68830198 | Msa0784290:CDS |
| TGGTTAGAATGGAACTAGAT+TGG | 0.415806 | 5_2:+68829737 | None:intergenic |
| TGATTTAATTCTTGATAAGT+TGG | 0.416195 | 5_2:+68829783 | Msa0784290:CDS |
| CTTGTGGTCCATTTCATATA+GGG | 0.417934 | 5_2:+68830697 | Msa0784290:CDS |
| CGAATTCCAACTTGTACACT+TGG | 0.421527 | 5_2:-68830497 | None:intergenic |
| GGTTAGAATGGAACTAGATT+GGG | 0.421888 | 5_2:+68829738 | None:intergenic |
| TTATATATCCCTATATGAAA+TGG | 0.424795 | 5_2:-68830705 | None:intergenic |
| TTATCTTGTGAAATCATTAG+AGG | 0.436221 | 5_2:+68830428 | Msa0784290:CDS |
| ATAGGAGCAACATTCTTAGA+AGG | 0.444870 | 5_2:-68830069 | None:intergenic |
| TTGGCGCCGTGTGCAAGAAT+TGG | 0.448573 | 5_2:+68829830 | Msa0784290:CDS |
| ATAGAACATAACATCCATAA+AGG | 0.458967 | 5_2:-68830289 | None:intergenic |
| AGAAGGATGCAATAGTGTTA+TGG | 0.460688 | 5_2:-68830052 | None:intergenic |
| TGTTCTTGGGATCATTAGCA+TGG | 0.462460 | 5_2:-68829908 | None:intergenic |
| ATGCTAAAGCTTGAGAGTCT+TGG | 0.465110 | 5_2:+68830546 | Msa0784290:CDS |
| TAAAAGCGGGCGAACCATGC+TGG | 0.470666 | 5_2:+68830235 | Msa0784290:CDS |
| GTATCAGCTTCATACTTCTC+CGG | 0.473456 | 5_2:+68830609 | Msa0784290:CDS |
| AACCATGCTGGACTTATGTA+TGG | 0.481402 | 5_2:+68830247 | Msa0784290:CDS |
| TCTTATTACCATATTTGTTG+TGG | 0.483010 | 5_2:+68829988 | Msa0784290:CDS |
| CTTATGTATGGAGCTTGAGC+TGG | 0.493140 | 5_2:+68830259 | Msa0784290:CDS |
| TTTATCTGAGGTCGGGTACA+AGG | 0.517119 | 5_2:+68830125 | Msa0784290:CDS |
| ACCAAATGATTATATGGTTG+CGG | 0.517425 | 5_2:+68830176 | Msa0784290:CDS |
| TGATTTCCAAGTGTACAAGT+TGG | 0.520656 | 5_2:+68830491 | Msa0784290:CDS |
| GTTGTGGATTTAGCCATGGT+TGG | 0.523421 | 5_2:+68830004 | Msa0784290:CDS |
| GTGAAGATTATGATGATCAA+TGG | 0.528142 | 5_2:-68830742 | None:intergenic |
| ATACAAGTTTATCTGAGGTC+GGG | 0.533775 | 5_2:+68830118 | Msa0784290:CDS |
| GGGATATATAATGTAAGAGA+TGG | 0.535003 | 5_2:+68830717 | Msa0784290:CDS |
| TATACAAGTTTATCTGAGGT+CGG | 0.543905 | 5_2:+68830117 | Msa0784290:CDS |
| ATTTGTTGTGGATTTAGCCA+TGG | 0.546254 | 5_2:+68830000 | Msa0784290:CDS |
| ATGGATGTTATGTTCTATGG+AGG | 0.548376 | 5_2:+68830294 | Msa0784290:CDS |
| AAATTTGGTAAAACCCAGAA+AGG | 0.548520 | 5_2:-68830795 | None:intergenic |
| GTTCTTGGGATCATTAGCAT+GGG | 0.554796 | 5_2:-68829907 | None:intergenic |
| TATCTTGTGAAATCATTAGA+GGG | 0.568311 | 5_2:+68830429 | Msa0784290:CDS |
| GGTAAAACCCAGAAAGGTGG+TGG | 0.590899 | 5_2:-68830789 | None:intergenic |
| TTGGAATTCGATGCTCAGAC+CGG | 0.595230 | 5_2:+68830510 | Msa0784290:CDS |
| TATGTTGCTAGTAAATATCA+CGG | 0.603958 | 5_2:+68830324 | Msa0784290:CDS |
| CTATTGTTGCAAGCCAACCA+TGG | 0.611822 | 5_2:-68830017 | None:intergenic |
| AACTTGTATATGATCGATCG+AGG | 0.611957 | 5_2:-68830104 | None:intergenic |
| AAGTTAGATTGTGTAACTTG+TGG | 0.613074 | 5_2:+68830681 | Msa0784290:CDS |
| ATCATATACAAGTTTATCTG+AGG | 0.615631 | 5_2:+68830113 | Msa0784290:CDS |
| GTATATGATCGATCGAGGGT+TGG | 0.616455 | 5_2:-68830099 | None:intergenic |
| AGCTTAACCATCAAGATCAG+CGG | 0.626714 | 5_2:+68829866 | Msa0784290:CDS |
| CTCCATACATAAGTCCAGCA+TGG | 0.636983 | 5_2:-68830249 | None:intergenic |
| AATCATTAGAGGGAGACTTG+TGG | 0.640892 | 5_2:+68830439 | Msa0784290:CDS |
| TTTGGTAAAACCCAGAAAGG+TGG | 0.643098 | 5_2:-68830792 | None:intergenic |
| TAATCGCCAATTCTTGCACA+CGG | 0.653587 | 5_2:-68829836 | None:intergenic |
| ACTTGTATATGATCGATCGA+GGG | 0.674359 | 5_2:-68830103 | None:intergenic |
| ATTAGAGGGAGACTTGTGGA+TGG | 0.690554 | 5_2:+68830443 | Msa0784290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAATGGATACATTTTTT+TGG | - | chr5_2:68829959-68829978 | None:intergenic | 15.0% |
| !!! | TTTAAATGGATACATTTTTT+TGG | - | chr5_2:68829959-68829978 | None:intergenic | 15.0% |
| !! | TGATTTAATTCTTGATAAGT+TGG | + | chr5_2:68829783-68829802 | Msa0784290:CDS | 20.0% |
| !! | TAAGAATTTGGCAATTTAAA+TGG | - | chr5_2:68829973-68829992 | None:intergenic | 20.0% |
| !! | CAAATATGGTAATAAGAATT+TGG | - | chr5_2:68829985-68830004 | None:intergenic | 20.0% |
| !!! | ATGTTTCGTTTTTATAAAAG+CGG | + | chr5_2:68830221-68830240 | Msa0784290:CDS | 20.0% |
| !!! | TAGCATTTGTTTAAAATTTC+CGG | - | chr5_2:68830532-68830551 | None:intergenic | 20.0% |
| !! | TTATATATCCCTATATGAAA+TGG | - | chr5_2:68830708-68830727 | None:intergenic | 20.0% |
| !! | TGATTTAATTCTTGATAAGT+TGG | + | chr5_2:68829783-68829802 | Msa0784290:CDS | 20.0% |
| !! | TAAGAATTTGGCAATTTAAA+TGG | - | chr5_2:68829973-68829992 | None:intergenic | 20.0% |
| !! | CAAATATGGTAATAAGAATT+TGG | - | chr5_2:68829985-68830004 | None:intergenic | 20.0% |
| !!! | ATGTTTCGTTTTTATAAAAG+CGG | + | chr5_2:68830221-68830240 | Msa0784290:CDS | 20.0% |
| !!! | TAGCATTTGTTTAAAATTTC+CGG | - | chr5_2:68830532-68830551 | None:intergenic | 20.0% |
| !! | TTATATATCCCTATATGAAA+TGG | - | chr5_2:68830708-68830727 | None:intergenic | 20.0% |
| !! | CAAATAGATCACATTTGTTT+TGG | + | chr5_2:68829811-68829830 | Msa0784290:CDS | 25.0% |
| !! | TCTTATTACCATATTTGTTG+TGG | + | chr5_2:68829988-68830007 | Msa0784290:CDS | 25.0% |
| ! | ATCATATACAAGTTTATCTG+AGG | + | chr5_2:68830113-68830132 | Msa0784290:CDS | 25.0% |
| !!! | AATCATTTGGTCTTGTTATA+GGG | - | chr5_2:68830167-68830186 | None:intergenic | 25.0% |
| !!! | TAATCATTTGGTCTTGTTAT+AGG | - | chr5_2:68830168-68830187 | None:intergenic | 25.0% |
| ! | AACAAGACCAAATGATTATA+TGG | + | chr5_2:68830170-68830189 | Msa0784290:CDS | 25.0% |
| !!! | TGTTTCGTTTTTATAAAAGC+GGG | + | chr5_2:68830222-68830241 | Msa0784290:CDS | 25.0% |
| ! | ATAGAACATAACATCCATAA+AGG | - | chr5_2:68830292-68830311 | None:intergenic | 25.0% |
| ! | TTTATGGATGTTATGTTCTA+TGG | + | chr5_2:68830291-68830310 | Msa0784290:CDS | 25.0% |
| ! | TATGTTGCTAGTAAATATCA+CGG | + | chr5_2:68830324-68830343 | Msa0784290:CDS | 25.0% |
| !! | GGTATAGTATCTTTTAATCT+TGG | + | chr5_2:68830345-68830364 | Msa0784290:CDS | 25.0% |
| ! | TTATCTTGTGAAATCATTAG+AGG | + | chr5_2:68830428-68830447 | Msa0784290:CDS | 25.0% |
| ! | TATCTTGTGAAATCATTAGA+GGG | + | chr5_2:68830429-68830448 | Msa0784290:CDS | 25.0% |
| !! | CAAATAGATCACATTTGTTT+TGG | + | chr5_2:68829811-68829830 | Msa0784290:CDS | 25.0% |
| !! | TCTTATTACCATATTTGTTG+TGG | + | chr5_2:68829988-68830007 | Msa0784290:CDS | 25.0% |
| ! | ATCATATACAAGTTTATCTG+AGG | + | chr5_2:68830113-68830132 | Msa0784290:CDS | 25.0% |
| !!! | AATCATTTGGTCTTGTTATA+GGG | - | chr5_2:68830167-68830186 | None:intergenic | 25.0% |
| !!! | TAATCATTTGGTCTTGTTAT+AGG | - | chr5_2:68830168-68830187 | None:intergenic | 25.0% |
| ! | AACAAGACCAAATGATTATA+TGG | + | chr5_2:68830170-68830189 | Msa0784290:CDS | 25.0% |
| !!! | TGTTTCGTTTTTATAAAAGC+GGG | + | chr5_2:68830222-68830241 | Msa0784290:CDS | 25.0% |
| ! | ATAGAACATAACATCCATAA+AGG | - | chr5_2:68830292-68830311 | None:intergenic | 25.0% |
| ! | TTTATGGATGTTATGTTCTA+TGG | + | chr5_2:68830291-68830310 | Msa0784290:CDS | 25.0% |
| ! | TATGTTGCTAGTAAATATCA+CGG | + | chr5_2:68830324-68830343 | Msa0784290:CDS | 25.0% |
| !! | GGTATAGTATCTTTTAATCT+TGG | + | chr5_2:68830345-68830364 | Msa0784290:CDS | 25.0% |
| ! | TTATCTTGTGAAATCATTAG+AGG | + | chr5_2:68830428-68830447 | Msa0784290:CDS | 25.0% |
| ! | TATCTTGTGAAATCATTAGA+GGG | + | chr5_2:68830429-68830448 | Msa0784290:CDS | 25.0% |
| ACAAACATCTTTCTGTTCTT+GGG | - | chr5_2:68829924-68829943 | None:intergenic | 30.0% | |
| TACAAACATCTTTCTGTTCT+TGG | - | chr5_2:68829925-68829944 | None:intergenic | 30.0% | |
| ! | TATACAAGTTTATCTGAGGT+CGG | + | chr5_2:68830117-68830136 | Msa0784290:CDS | 30.0% |
| ACCAAATGATTATATGGTTG+CGG | + | chr5_2:68830176-68830195 | Msa0784290:CDS | 30.0% | |
| ! | CTTTTAATCTTGGTCATAAG+AGG | + | chr5_2:68830355-68830374 | Msa0784290:CDS | 30.0% |
| !! | TGGAGACAATGTTTTATTCT+TGG | + | chr5_2:68830566-68830585 | Msa0784290:CDS | 30.0% |
| !! | GGAGACAATGTTTTATTCTT+GGG | + | chr5_2:68830567-68830586 | Msa0784290:CDS | 30.0% |
| !!! | TGAATCTTTTTTCAGACAAC+CGG | - | chr5_2:68830631-68830650 | None:intergenic | 30.0% |
| AAGTTAGATTGTGTAACTTG+TGG | + | chr5_2:68830681-68830700 | Msa0784290:CDS | 30.0% | |
| GGGATATATAATGTAAGAGA+TGG | + | chr5_2:68830717-68830736 | Msa0784290:CDS | 30.0% | |
| GTGAAGATTATGATGATCAA+TGG | - | chr5_2:68830745-68830764 | None:intergenic | 30.0% | |
| AAATTTGGTAAAACCCAGAA+AGG | - | chr5_2:68830798-68830817 | None:intergenic | 30.0% | |
| ACAAACATCTTTCTGTTCTT+GGG | - | chr5_2:68829924-68829943 | None:intergenic | 30.0% | |
| TACAAACATCTTTCTGTTCT+TGG | - | chr5_2:68829925-68829944 | None:intergenic | 30.0% | |
| ! | TATACAAGTTTATCTGAGGT+CGG | + | chr5_2:68830117-68830136 | Msa0784290:CDS | 30.0% |
| ACCAAATGATTATATGGTTG+CGG | + | chr5_2:68830176-68830195 | Msa0784290:CDS | 30.0% | |
| ! | CTTTTAATCTTGGTCATAAG+AGG | + | chr5_2:68830355-68830374 | Msa0784290:CDS | 30.0% |
| !! | TGGAGACAATGTTTTATTCT+TGG | + | chr5_2:68830566-68830585 | Msa0784290:CDS | 30.0% |
| !! | GGAGACAATGTTTTATTCTT+GGG | + | chr5_2:68830567-68830586 | Msa0784290:CDS | 30.0% |
| !!! | TGAATCTTTTTTCAGACAAC+CGG | - | chr5_2:68830631-68830650 | None:intergenic | 30.0% |
| AAGTTAGATTGTGTAACTTG+TGG | + | chr5_2:68830681-68830700 | Msa0784290:CDS | 30.0% | |
| GGGATATATAATGTAAGAGA+TGG | + | chr5_2:68830717-68830736 | Msa0784290:CDS | 30.0% | |
| GTGAAGATTATGATGATCAA+TGG | - | chr5_2:68830745-68830764 | None:intergenic | 30.0% | |
| AAATTTGGTAAAACCCAGAA+AGG | - | chr5_2:68830798-68830817 | None:intergenic | 30.0% | |
| GGCTAAATCCACAACAAATA+TGG | - | chr5_2:68829999-68830018 | None:intergenic | 35.0% | |
| !! | ATTTGTTGTGGATTTAGCCA+TGG | + | chr5_2:68830000-68830019 | Msa0784290:CDS | 35.0% |
| AGAAGGATGCAATAGTGTTA+TGG | - | chr5_2:68830055-68830074 | None:intergenic | 35.0% | |
| ATAGGAGCAACATTCTTAGA+AGG | - | chr5_2:68830072-68830091 | None:intergenic | 35.0% | |
| ACTTGTATATGATCGATCGA+GGG | - | chr5_2:68830106-68830125 | None:intergenic | 35.0% | |
| AACTTGTATATGATCGATCG+AGG | - | chr5_2:68830107-68830126 | None:intergenic | 35.0% | |
| ! | ATACAAGTTTATCTGAGGTC+GGG | + | chr5_2:68830118-68830137 | Msa0784290:CDS | 35.0% |
| ATGGATGTTATGTTCTATGG+AGG | + | chr5_2:68830294-68830313 | Msa0784290:CDS | 35.0% | |
| GATAACTCCAAATCCAATTC+AGG | + | chr5_2:68830377-68830396 | Msa0784290:CDS | 35.0% | |
| TGAAAAGCTATGTCCTGAAT+TGG | - | chr5_2:68830393-68830412 | None:intergenic | 35.0% | |
| ! | ATTCAGGACATAGCTTTTCA+TGG | + | chr5_2:68830393-68830412 | Msa0784290:CDS | 35.0% |
| ! | GCTTTTCATGGAAGGTTTAA+AGG | + | chr5_2:68830405-68830424 | Msa0784290:CDS | 35.0% |
| TGATTTCCAAGTGTACAAGT+TGG | + | chr5_2:68830491-68830510 | Msa0784290:CDS | 35.0% | |
| ACTTGTGGTCCATTTCATAT+AGG | + | chr5_2:68830696-68830715 | Msa0784290:CDS | 35.0% | |
| CTTGTGGTCCATTTCATATA+GGG | + | chr5_2:68830697-68830716 | Msa0784290:CDS | 35.0% | |
| GGCTAAATCCACAACAAATA+TGG | - | chr5_2:68829999-68830018 | None:intergenic | 35.0% | |
| !! | ATTTGTTGTGGATTTAGCCA+TGG | + | chr5_2:68830000-68830019 | Msa0784290:CDS | 35.0% |
| AGAAGGATGCAATAGTGTTA+TGG | - | chr5_2:68830055-68830074 | None:intergenic | 35.0% | |
| ATAGGAGCAACATTCTTAGA+AGG | - | chr5_2:68830072-68830091 | None:intergenic | 35.0% | |
| ACTTGTATATGATCGATCGA+GGG | - | chr5_2:68830106-68830125 | None:intergenic | 35.0% | |
| AACTTGTATATGATCGATCG+AGG | - | chr5_2:68830107-68830126 | None:intergenic | 35.0% | |
| ! | ATACAAGTTTATCTGAGGTC+GGG | + | chr5_2:68830118-68830137 | Msa0784290:CDS | 35.0% |
| ATGGATGTTATGTTCTATGG+AGG | + | chr5_2:68830294-68830313 | Msa0784290:CDS | 35.0% | |
| GATAACTCCAAATCCAATTC+AGG | + | chr5_2:68830377-68830396 | Msa0784290:CDS | 35.0% | |
| TGAAAAGCTATGTCCTGAAT+TGG | - | chr5_2:68830393-68830412 | None:intergenic | 35.0% | |
| ! | ATTCAGGACATAGCTTTTCA+TGG | + | chr5_2:68830393-68830412 | Msa0784290:CDS | 35.0% |
| ! | GCTTTTCATGGAAGGTTTAA+AGG | + | chr5_2:68830405-68830424 | Msa0784290:CDS | 35.0% |
| TGATTTCCAAGTGTACAAGT+TGG | + | chr5_2:68830491-68830510 | Msa0784290:CDS | 35.0% | |
| ACTTGTGGTCCATTTCATAT+AGG | + | chr5_2:68830696-68830715 | Msa0784290:CDS | 35.0% | |
| CTTGTGGTCCATTTCATATA+GGG | + | chr5_2:68830697-68830716 | Msa0784290:CDS | 35.0% | |
| GGAACTAGATTGGGCAAATT+TGG | + | chr5_2:68829747-68829766 | Msa0784290:CDS | 40.0% | |
| TAATCGCCAATTCTTGCACA+CGG | - | chr5_2:68829839-68829858 | None:intergenic | 40.0% | |
| AGCTTAACCATCAAGATCAG+CGG | + | chr5_2:68829866-68829885 | Msa0784290:CDS | 40.0% | |
| TTCTAAACCGCTGATCTTGA+TGG | - | chr5_2:68829876-68829895 | None:intergenic | 40.0% | |
| GTTCTTGGGATCATTAGCAT+GGG | - | chr5_2:68829910-68829929 | None:intergenic | 40.0% | |
| TGTTCTTGGGATCATTAGCA+TGG | - | chr5_2:68829911-68829930 | None:intergenic | 40.0% | |
| GCCGCAACCATATAATCATT+TGG | - | chr5_2:68830180-68830199 | None:intergenic | 40.0% | |
| GCAATTCACACTAGCATTCA+TGG | + | chr5_2:68830198-68830217 | Msa0784290:CDS | 40.0% | |
| AACCATGCTGGACTTATGTA+TGG | + | chr5_2:68830247-68830266 | Msa0784290:CDS | 40.0% | |
| GCTATGTCCTGAATTGGATT+TGG | - | chr5_2:68830387-68830406 | None:intergenic | 40.0% | |
| ! | AGGACATAGCTTTTCATGGA+AGG | + | chr5_2:68830397-68830416 | Msa0784290:CDS | 40.0% |
| AATCATTAGAGGGAGACTTG+TGG | + | chr5_2:68830439-68830458 | Msa0784290:CDS | 40.0% | |
| CGAATTCCAACTTGTACACT+TGG | - | chr5_2:68830500-68830519 | None:intergenic | 40.0% | |
| ATGCTAAAGCTTGAGAGTCT+TGG | + | chr5_2:68830546-68830565 | Msa0784290:CDS | 40.0% | |
| GTATCAGCTTCATACTTCTC+CGG | + | chr5_2:68830609-68830628 | Msa0784290:CDS | 40.0% | |
| TTTGGTAAAACCCAGAAAGG+TGG | - | chr5_2:68830795-68830814 | None:intergenic | 40.0% | |
| GGAACTAGATTGGGCAAATT+TGG | + | chr5_2:68829747-68829766 | Msa0784290:CDS | 40.0% | |
| TAATCGCCAATTCTTGCACA+CGG | - | chr5_2:68829839-68829858 | None:intergenic | 40.0% | |
| AGCTTAACCATCAAGATCAG+CGG | + | chr5_2:68829866-68829885 | Msa0784290:CDS | 40.0% | |
| TTCTAAACCGCTGATCTTGA+TGG | - | chr5_2:68829876-68829895 | None:intergenic | 40.0% | |
| GTTCTTGGGATCATTAGCAT+GGG | - | chr5_2:68829910-68829929 | None:intergenic | 40.0% | |
| TGTTCTTGGGATCATTAGCA+TGG | - | chr5_2:68829911-68829930 | None:intergenic | 40.0% | |
| GCCGCAACCATATAATCATT+TGG | - | chr5_2:68830180-68830199 | None:intergenic | 40.0% | |
| GCAATTCACACTAGCATTCA+TGG | + | chr5_2:68830198-68830217 | Msa0784290:CDS | 40.0% | |
| AACCATGCTGGACTTATGTA+TGG | + | chr5_2:68830247-68830266 | Msa0784290:CDS | 40.0% | |
| GCTATGTCCTGAATTGGATT+TGG | - | chr5_2:68830387-68830406 | None:intergenic | 40.0% | |
| ! | AGGACATAGCTTTTCATGGA+AGG | + | chr5_2:68830397-68830416 | Msa0784290:CDS | 40.0% |
| AATCATTAGAGGGAGACTTG+TGG | + | chr5_2:68830439-68830458 | Msa0784290:CDS | 40.0% | |
| CGAATTCCAACTTGTACACT+TGG | - | chr5_2:68830500-68830519 | None:intergenic | 40.0% | |
| ATGCTAAAGCTTGAGAGTCT+TGG | + | chr5_2:68830546-68830565 | Msa0784290:CDS | 40.0% | |
| GTATCAGCTTCATACTTCTC+CGG | + | chr5_2:68830609-68830628 | Msa0784290:CDS | 40.0% | |
| TTTGGTAAAACCCAGAAAGG+TGG | - | chr5_2:68830795-68830814 | None:intergenic | 40.0% | |
| GTTGTGGATTTAGCCATGGT+TGG | + | chr5_2:68830004-68830023 | Msa0784290:CDS | 45.0% | |
| CTATTGTTGCAAGCCAACCA+TGG | - | chr5_2:68830020-68830039 | None:intergenic | 45.0% | |
| TCGAGGGTTGGAAGACTAAT+AGG | - | chr5_2:68830090-68830109 | None:intergenic | 45.0% | |
| GTATATGATCGATCGAGGGT+TGG | - | chr5_2:68830102-68830121 | None:intergenic | 45.0% | |
| ! | TTTATCTGAGGTCGGGTACA+AGG | + | chr5_2:68830125-68830144 | Msa0784290:CDS | 45.0% |
| CTCCATACATAAGTCCAGCA+TGG | - | chr5_2:68830252-68830271 | None:intergenic | 45.0% | |
| CTTATGTATGGAGCTTGAGC+TGG | + | chr5_2:68830259-68830278 | Msa0784290:CDS | 45.0% | |
| GAGCTGGAGTCATTCCTTTA+TGG | + | chr5_2:68830275-68830294 | Msa0784290:CDS | 45.0% | |
| ATTAGAGGGAGACTTGTGGA+TGG | + | chr5_2:68830443-68830462 | Msa0784290:CDS | 45.0% | |
| TTGGAATTCGATGCTCAGAC+CGG | + | chr5_2:68830510-68830529 | Msa0784290:CDS | 45.0% | |
| GTTGTGGATTTAGCCATGGT+TGG | + | chr5_2:68830004-68830023 | Msa0784290:CDS | 45.0% | |
| CTATTGTTGCAAGCCAACCA+TGG | - | chr5_2:68830020-68830039 | None:intergenic | 45.0% | |
| TCGAGGGTTGGAAGACTAAT+AGG | - | chr5_2:68830090-68830109 | None:intergenic | 45.0% | |
| GTATATGATCGATCGAGGGT+TGG | - | chr5_2:68830102-68830121 | None:intergenic | 45.0% | |
| ! | TTTATCTGAGGTCGGGTACA+AGG | + | chr5_2:68830125-68830144 | Msa0784290:CDS | 45.0% |
| CTCCATACATAAGTCCAGCA+TGG | - | chr5_2:68830252-68830271 | None:intergenic | 45.0% | |
| CTTATGTATGGAGCTTGAGC+TGG | + | chr5_2:68830259-68830278 | Msa0784290:CDS | 45.0% | |
| GAGCTGGAGTCATTCCTTTA+TGG | + | chr5_2:68830275-68830294 | Msa0784290:CDS | 45.0% | |
| ATTAGAGGGAGACTTGTGGA+TGG | + | chr5_2:68830443-68830462 | Msa0784290:CDS | 45.0% | |
| TTGGAATTCGATGCTCAGAC+CGG | + | chr5_2:68830510-68830529 | Msa0784290:CDS | 45.0% | |
| GGTAAAACCCAGAAAGGTGG+TGG | - | chr5_2:68830792-68830811 | None:intergenic | 50.0% | |
| GGTAAAACCCAGAAAGGTGG+TGG | - | chr5_2:68830792-68830811 | None:intergenic | 50.0% | |
| TTGGCGCCGTGTGCAAGAAT+TGG | + | chr5_2:68829830-68829849 | Msa0784290:CDS | 55.0% | |
| TAAAAGCGGGCGAACCATGC+TGG | + | chr5_2:68830235-68830254 | Msa0784290:CDS | 55.0% | |
| TTGGCGCCGTGTGCAAGAAT+TGG | + | chr5_2:68829830-68829849 | Msa0784290:CDS | 55.0% | |
| TAAAAGCGGGCGAACCATGC+TGG | + | chr5_2:68830235-68830254 | Msa0784290:CDS | 55.0% | |
| AGCAGCAGCCACCACCTTTC+TGG | + | chr5_2:68830781-68830800 | Msa0784290:CDS | 60.0% | |
| GCAGCAGCCACCACCTTTCT+GGG | + | chr5_2:68830782-68830801 | Msa0784290:CDS | 60.0% | |
| AGCAGCAGCCACCACCTTTC+TGG | + | chr5_2:68830781-68830800 | Msa0784290:CDS | 60.0% | |
| GCAGCAGCCACCACCTTTCT+GGG | + | chr5_2:68830782-68830801 | Msa0784290:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 68829745 | 68830824 | 68829745 | ID=Msa0784290;Name=Msa0784290 |
| chr5_2 | mRNA | 68829745 | 68830824 | 68829745 | ID=Msa0784290-mRNA-1;Parent=Msa0784290;Name=Msa0784290-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|359 |
| chr5_2 | exon | 68829745 | 68830824 | 68829745 | ID=Msa0784290-mRNA-1:exon:20665;Parent=Msa0784290-mRNA-1 |
| chr5_2 | CDS | 68829745 | 68830824 | 68829745 | ID=Msa0784290-mRNA-1:cds;Parent=Msa0784290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
