Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1287810 | sp|Q9SSE9|JMJ25_ARATH | 49.296 | 142 | 62 | 2 | 69 | 203 | 550 | 688 | 3.06e-35 | 134 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1287810 | A0A396J3U9 | 65.769 | 260 | 26 | 3 | 1 | 203 | 357 | 610 | 9.28e-101 | 318 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0012700 | Msa1287810 | 0.845027 | 5.244969e-59 | -8.615850e-47 |
Msa0013750 | Msa1287810 | 0.866267 | 3.229920e-65 | -8.615850e-47 |
Msa0014330 | Msa1287810 | 0.824126 | 9.558341e-54 | -8.615850e-47 |
Msa0015750 | Msa1287810 | 0.889754 | 1.824464e-73 | -8.615850e-47 |
Msa0016570 | Msa1287810 | 0.889731 | 1.862718e-73 | -8.615850e-47 |
Msa0016580 | Msa1287810 | 0.861977 | 7.017252e-64 | -8.615850e-47 |
Msa0028380 | Msa1287810 | 0.833665 | 4.680075e-56 | -8.615850e-47 |
Msa0028480 | Msa1287810 | 0.825481 | 4.579677e-54 | -8.615850e-47 |
Msa0071500 | Msa1287810 | 0.804809 | 1.807847e-49 | -8.615850e-47 |
Msa0092630 | Msa1287810 | 0.853524 | 2.257586e-61 | -8.615850e-47 |
Msa0093170 | Msa1287810 | 0.800375 | 1.484261e-48 | -8.615850e-47 |
Msa0102070 | Msa1287810 | 0.936804 | 9.650851e-98 | -8.615850e-47 |
Msa0107580 | Msa1287810 | 0.807177 | 5.741574e-50 | -8.615850e-47 |
Msa0110270 | Msa1287810 | 0.855054 | 8.160569e-62 | -8.615850e-47 |
Msa0111510 | Msa1287810 | 0.848770 | 4.960319e-60 | -8.615850e-47 |
Msa0118060 | Msa1287810 | 0.817769 | 2.777688e-52 | -8.615850e-47 |
Msa0604350 | Msa1287810 | 0.863035 | 3.316556e-64 | -8.615850e-47 |
Msa0636170 | Msa1287810 | 0.887392 | 1.485276e-72 | -8.615850e-47 |
Msa0639610 | Msa1287810 | 0.865332 | 6.377165e-65 | -8.615850e-47 |
Msa0650630 | Msa1287810 | 0.800630 | 1.316908e-48 | -8.615850e-47 |
Msa0668260 | Msa1287810 | 0.814096 | 1.833395e-51 | -8.615850e-47 |
Msa0675830 | Msa1287810 | 0.810296 | 1.237042e-50 | -8.615850e-47 |
Msa0678930 | Msa1287810 | 0.876169 | 1.728955e-68 | -8.615850e-47 |
Msa0689390 | Msa1287810 | 0.805848 | 1.094774e-49 | -8.615850e-47 |
Msa0694370 | Msa1287810 | 0.850068 | 2.155677e-60 | -8.615850e-47 |
Msa0718780 | Msa1287810 | 0.814838 | 1.256233e-51 | -8.615850e-47 |
Msa0725850 | Msa1287810 | 0.843785 | 1.131563e-58 | -8.615850e-47 |
Msa0726140 | Msa1287810 | 0.919744 | 3.068007e-87 | -8.615850e-47 |
Msa0729800 | Msa1287810 | 0.907312 | 5.803071e-81 | -8.615850e-47 |
Msa0731560 | Msa1287810 | 0.819368 | 1.204913e-52 | -8.615850e-47 |
Msa0732310 | Msa1287810 | 0.841796 | 3.822460e-58 | -8.615850e-47 |
Msa0732710 | Msa1287810 | 0.834162 | 3.515134e-56 | -8.615850e-47 |
Msa0733290 | Msa1287810 | 0.892236 | 1.911814e-74 | -8.615850e-47 |
Msa0735080 | Msa1287810 | 0.838656 | 2.525652e-57 | -8.615850e-47 |
Msa0738490 | Msa1287810 | 0.810183 | 1.308074e-50 | -8.615850e-47 |
Msa0741990 | Msa1287810 | 0.847616 | 1.032941e-59 | -8.615850e-47 |
Msa0743810 | Msa1287810 | 0.956838 | 1.143301e-114 | -8.615850e-47 |
Msa0745060 | Msa1287810 | 0.939957 | 5.294281e-100 | -8.615850e-47 |
Msa0764960 | Msa1287810 | 0.813543 | 2.426860e-51 | -8.615850e-47 |
Msa0766630 | Msa1287810 | 0.801314 | 9.544502e-49 | -8.615850e-47 |
Msa0767720 | Msa1287810 | 0.881128 | 3.104645e-70 | -8.615850e-47 |
Msa0768370 | Msa1287810 | 0.817347 | 3.457493e-52 | -8.615850e-47 |
Msa0775300 | Msa1287810 | 0.825386 | 4.822420e-54 | -8.615850e-47 |
Msa0777870 | Msa1287810 | 0.866926 | 1.994653e-65 | -8.615850e-47 |
Msa0783160 | Msa1287810 | 0.926969 | 2.254424e-91 | -8.615850e-47 |
Msa0784290 | Msa1287810 | 0.834742 | 2.513621e-56 | -8.615850e-47 |
Msa0784300 | Msa1287810 | 0.826439 | 2.710659e-54 | -8.615850e-47 |
Msa0787600 | Msa1287810 | 0.922654 | 7.422492e-89 | -8.615850e-47 |
Msa0789250 | Msa1287810 | 0.823510 | 1.332089e-53 | -8.615850e-47 |
Msa0808010 | Msa1287810 | 0.916646 | 1.386975e-85 | -8.615850e-47 |
Msa0808020 | Msa1287810 | 0.913337 | 6.915488e-84 | -8.615850e-47 |
Msa0811080 | Msa1287810 | 0.845400 | 4.158335e-59 | -8.615850e-47 |
Msa0811270 | Msa1287810 | 0.842158 | 3.067064e-58 | -8.615850e-47 |
Msa0824600 | Msa1287810 | 0.830742 | 2.474951e-55 | -8.615850e-47 |
Msa0825860 | Msa1287810 | 0.949091 | 2.561069e-107 | -8.615850e-47 |
Msa0826750 | Msa1287810 | 0.807042 | 6.131852e-50 | -8.615850e-47 |
Msa0833290 | Msa1287810 | 0.870930 | 1.005754e-66 | -8.615850e-47 |
Msa0833300 | Msa1287810 | 0.843414 | 1.422287e-58 | -8.615850e-47 |
Msa0123810 | Msa1287810 | 0.848035 | 7.922271e-60 | -8.615850e-47 |
Msa0124100 | Msa1287810 | 0.856243 | 3.670307e-62 | -8.615850e-47 |
Msa0124150 | Msa1287810 | 0.853164 | 2.863307e-61 | -8.615850e-47 |
Msa0142220 | Msa1287810 | 0.860352 | 2.193216e-63 | -8.615850e-47 |
Msa0145750 | Msa1287810 | 0.895149 | 1.260842e-75 | -8.615850e-47 |
Msa0153910 | Msa1287810 | 0.866174 | 3.456288e-65 | -8.615850e-47 |
Msa0188460 | Msa1287810 | 0.807203 | 5.669268e-50 | -8.615850e-47 |
Msa0192970 | Msa1287810 | 0.821398 | 4.123497e-53 | -8.615850e-47 |
Msa0197010 | Msa1287810 | 0.823631 | 1.248493e-53 | -8.615850e-47 |
Msa0200000 | Msa1287810 | 0.889646 | 2.009406e-73 | -8.615850e-47 |
Msa0200940 | Msa1287810 | 0.819683 | 1.021207e-52 | -8.615850e-47 |
Msa0214890 | Msa1287810 | 0.819906 | 9.079566e-53 | -8.615850e-47 |
Msa0227480 | Msa1287810 | 0.912620 | 1.580451e-83 | -8.615850e-47 |
Msa0231000 | Msa1287810 | 0.836622 | 8.402933e-57 | -8.615850e-47 |
Msa0232850 | Msa1287810 | 0.893631 | 5.249647e-75 | -8.615850e-47 |
Msa0235140 | Msa1287810 | 0.849638 | 2.843368e-60 | -8.615850e-47 |
Msa1230430 | Msa1287810 | 0.838044 | 3.631983e-57 | -8.615850e-47 |
Msa1246880 | Msa1287810 | 0.882383 | 1.090819e-70 | -8.615850e-47 |
Msa1248300 | Msa1287810 | 0.836600 | 8.509423e-57 | -8.615850e-47 |
Msa1248310 | Msa1287810 | 0.843559 | 1.300651e-58 | -8.615850e-47 |
Msa1248370 | Msa1287810 | 0.812122 | 4.970474e-51 | -8.615850e-47 |
Msa1251910 | Msa1287810 | 0.814582 | 1.431784e-51 | -8.615850e-47 |
Msa1260100 | Msa1287810 | 0.843680 | 1.207078e-58 | -8.615850e-47 |
Msa1269670 | Msa1287810 | 0.937970 | 1.453469e-98 | -8.615850e-47 |
Msa1270230 | Msa1287810 | 0.943537 | 1.005938e-102 | -8.615850e-47 |
Msa1270240 | Msa1287810 | 0.915309 | 6.858912e-85 | -8.615850e-47 |
Msa1270270 | Msa1287810 | 0.921066 | 5.758549e-88 | -8.615850e-47 |
Msa1273230 | Msa1287810 | 0.851567 | 8.162045e-61 | -8.615850e-47 |
Msa1283330 | Msa1287810 | 0.939344 | 1.488028e-99 | -8.615850e-47 |
Msa1285540 | Msa1287810 | 0.809221 | 2.106661e-50 | -8.615850e-47 |
Msa1285930 | Msa1287810 | 0.961211 | 1.937483e-119 | -8.615850e-47 |
Msa1286000 | Msa1287810 | 0.800412 | 1.459031e-48 | -8.615850e-47 |
Msa1287800 | Msa1287810 | 0.972434 | 9.266276e-135 | -8.615850e-47 |
Msa1287810 | Msa1287820 | 0.889844 | 1.683229e-73 | -8.615850e-47 |
Msa1287810 | Msa1287830 | 0.903589 | 2.968220e-79 | -8.615850e-47 |
Msa1287810 | Msa1288560 | 0.818690 | 1.718788e-52 | -8.615850e-47 |
Msa1287810 | Msa1289420 | 0.865266 | 6.689162e-65 | -8.615850e-47 |
Msa1287810 | Msa1289430 | 0.894944 | 1.530954e-75 | -8.615850e-47 |
Msa1287810 | Msa1297210 | 0.849652 | 2.818230e-60 | -8.615850e-47 |
Msa1287810 | Msa1305480 | 0.887922 | 9.318246e-73 | -8.615850e-47 |
Msa1287810 | Msa1307890 | 0.889242 | 2.885890e-73 | -8.615850e-47 |
Msa1287810 | Msa1310120 | 0.868278 | 7.352599e-66 | -8.615850e-47 |
Msa1287810 | Msa1313980 | 0.801445 | 8.974766e-49 | -8.615850e-47 |
Msa1287810 | Msa1314280 | 0.832753 | 7.897474e-56 | -8.615850e-47 |
Msa1287810 | Msa1320300 | 0.891562 | 3.548119e-74 | -8.615850e-47 |
Msa1287810 | Msa1321560 | 0.832663 | 8.315665e-56 | -8.615850e-47 |
Msa1287810 | Msa1340590 | 0.901595 | 2.286330e-78 | -8.615850e-47 |
Msa1287810 | Msa1342200 | 0.852590 | 4.177809e-61 | -8.615850e-47 |
Msa1287810 | Msa1344520 | 0.854587 | 1.114699e-61 | -8.615850e-47 |
Msa1287810 | Msa1369430 | 0.861581 | 9.280517e-64 | -8.615850e-47 |
Msa1287810 | Msa1370210 | 0.815869 | 7.410962e-52 | -8.615850e-47 |
Msa1287810 | Msa1382690 | 0.839588 | 1.448338e-57 | -8.615850e-47 |
Msa1287810 | Msa1382700 | 0.851412 | 9.028624e-61 | -8.615850e-47 |
Msa1287810 | Msa1386330 | 0.837293 | 5.662907e-57 | -8.615850e-47 |
Msa1287810 | Msa1397150 | 0.853443 | 2.382232e-61 | -8.615850e-47 |
Msa1287810 | Msa1397580 | 0.898468 | 5.154378e-77 | -8.615850e-47 |
Msa1287810 | Msa1402790 | 0.852218 | 5.331104e-61 | -8.615850e-47 |
Msa1287810 | Msa1404000 | 0.919992 | 2.248016e-87 | -8.615850e-47 |
Msa1287810 | Msa1408780 | 0.886869 | 2.349722e-72 | -8.615850e-47 |
Msa1287810 | Msa1410330 | 0.821824 | 3.288518e-53 | -8.615850e-47 |
Msa1287810 | Msa1415310 | 0.924869 | 3.954103e-90 | -8.615850e-47 |
Msa1287810 | Msa1422180 | 0.902810 | 6.624195e-79 | -8.615850e-47 |
Msa1287810 | Msa1433120 | 0.921366 | 3.924306e-88 | -8.615850e-47 |
Msa1287810 | Msa1451190 | 0.832158 | 1.108738e-55 | -8.615850e-47 |
Msa1287810 | Msa1451570 | 0.830903 | 2.259605e-55 | -8.615850e-47 |
Msa0365500 | Msa1287810 | 0.894331 | 2.725842e-75 | -8.615850e-47 |
Msa0366420 | Msa1287810 | 0.837985 | 3.762913e-57 | -8.615850e-47 |
Msa0366430 | Msa1287810 | 0.835744 | 1.403695e-56 | -8.615850e-47 |
Msa0366580 | Msa1287810 | 0.823407 | 1.408454e-53 | -8.615850e-47 |
Msa0369730 | Msa1287810 | 0.815667 | 8.220332e-52 | -8.615850e-47 |
Msa0378360 | Msa1287810 | 0.800310 | 1.530562e-48 | -8.615850e-47 |
Msa0384800 | Msa1287810 | 0.891730 | 3.040972e-74 | -8.615850e-47 |
Msa0384890 | Msa1287810 | 0.829358 | 5.383813e-55 | -8.615850e-47 |
Msa0394970 | Msa1287810 | 0.835487 | 1.630735e-56 | -8.615850e-47 |
Msa0396600 | Msa1287810 | 0.816111 | 6.545496e-52 | -8.615850e-47 |
Msa0406120 | Msa1287810 | 0.877180 | 7.727907e-69 | -8.615850e-47 |
Msa0406280 | Msa1287810 | 0.840242 | 9.783012e-58 | -8.615850e-47 |
Msa0407750 | Msa1287810 | 0.837437 | 5.199999e-57 | -8.615850e-47 |
Msa0414410 | Msa1287810 | 0.926315 | 5.548842e-91 | -8.615850e-47 |
Msa0414420 | Msa1287810 | 0.965530 | 1.005498e-124 | -8.615850e-47 |
Msa0423020 | Msa1287810 | 0.815653 | 8.280259e-52 | -8.615850e-47 |
Msa0429880 | Msa1287810 | 0.808528 | 2.963400e-50 | -8.615850e-47 |
Msa0435230 | Msa1287810 | 0.818587 | 1.813310e-52 | -8.615850e-47 |
Msa0436780 | Msa1287810 | 0.875000 | 4.347830e-68 | -8.615850e-47 |
Msa0436800 | Msa1287810 | 0.839728 | 1.332157e-57 | -8.615850e-47 |
Msa0438620 | Msa1287810 | 0.902242 | 1.183619e-78 | -8.615850e-47 |
Msa0444130 | Msa1287810 | 0.827784 | 1.292385e-54 | -8.615850e-47 |
Msa0445780 | Msa1287810 | 0.805366 | 1.382157e-49 | -8.615850e-47 |
Msa0450000 | Msa1287810 | 0.907772 | 3.530471e-81 | -8.615850e-47 |
Msa0450570 | Msa1287810 | 0.883149 | 5.730292e-71 | -8.615850e-47 |
Msa0451730 | Msa1287810 | 0.874697 | 5.515050e-68 | -8.615850e-47 |
Msa0452900 | Msa1287810 | 0.965607 | 7.986240e-125 | -8.615850e-47 |
Msa0452910 | Msa1287810 | 0.844554 | 7.037181e-59 | -8.615850e-47 |
Msa0453120 | Msa1287810 | 0.892443 | 1.579633e-74 | -8.615850e-47 |
Msa0454370 | Msa1287810 | 0.874438 | 6.755229e-68 | -8.615850e-47 |
Msa0454910 | Msa1287810 | 0.882907 | 7.025212e-71 | -8.615850e-47 |
Msa0459160 | Msa1287810 | 0.891951 | 2.483710e-74 | -8.615850e-47 |
Msa0459170 | Msa1287810 | 0.869755 | 2.440562e-66 | -8.615850e-47 |
Msa0479340 | Msa1287810 | 0.807392 | 5.168248e-50 | -8.615850e-47 |
Msa0482620 | Msa1287810 | 0.816540 | 5.245652e-52 | -8.615850e-47 |
Msa0979850 | Msa1287810 | 0.869323 | 3.373518e-66 | -8.615850e-47 |
Msa0981270 | Msa1287810 | 0.855893 | 4.645825e-62 | -8.615850e-47 |
Msa0981370 | Msa1287810 | 0.898972 | 3.140047e-77 | -8.615850e-47 |
Msa0986360 | Msa1287810 | 0.813793 | 2.138131e-51 | -8.615850e-47 |
Msa0986400 | Msa1287810 | 0.837929 | 3.887975e-57 | -8.615850e-47 |
Msa0989060 | Msa1287810 | 0.912358 | 2.134750e-83 | -8.615850e-47 |
Msa0989890 | Msa1287810 | 0.808411 | 3.137954e-50 | -8.615850e-47 |
Msa1016280 | Msa1287810 | 0.939284 | 1.645543e-99 | -8.615850e-47 |
Msa1023010 | Msa1287810 | 0.820061 | 8.367091e-53 | -8.615850e-47 |
Msa1023050 | Msa1287810 | 0.841472 | 4.654581e-58 | -8.615850e-47 |
Msa1024240 | Msa1287810 | 0.862133 | 6.287150e-64 | -8.615850e-47 |
Msa1024370 | Msa1287810 | 0.803848 | 2.865979e-49 | -8.615850e-47 |
Msa1025360 | Msa1287810 | 0.958746 | 1.095810e-116 | -8.615850e-47 |
Msa1025370 | Msa1287810 | 0.950353 | 1.961173e-108 | -8.615850e-47 |
Msa1028230 | Msa1287810 | 0.808497 | 3.007904e-50 | -8.615850e-47 |
Msa1030060 | Msa1287810 | 0.837242 | 5.834482e-57 | -8.615850e-47 |
Msa1037200 | Msa1287810 | 0.834521 | 2.856103e-56 | -8.615850e-47 |
Msa1042430 | Msa1287810 | 0.810602 | 1.062541e-50 | -8.615850e-47 |
Msa1044830 | Msa1287810 | 0.953980 | 8.255037e-112 | -8.615850e-47 |
Msa1044840 | Msa1287810 | 0.958692 | 1.256042e-116 | -8.615850e-47 |
Msa1047800 | Msa1287810 | 0.810265 | 1.256123e-50 | -8.615850e-47 |
Msa1060840 | Msa1287810 | 0.886883 | 2.319867e-72 | -8.615850e-47 |
Msa1062810 | Msa1287810 | 0.806241 | 9.052722e-50 | -8.615850e-47 |
Msa1063640 | Msa1287810 | 0.813236 | 2.835419e-51 | -8.615850e-47 |
Msa1065570 | Msa1287810 | 0.800244 | 1.578462e-48 | -8.615850e-47 |
Msa1068420 | Msa1287810 | 0.811729 | 6.053347e-51 | -8.615850e-47 |
Msa1077460 | Msa1287810 | 0.848666 | 5.301077e-60 | -8.615850e-47 |
Msa1087490 | Msa1287810 | 0.817915 | 2.573755e-52 | -8.615850e-47 |
Msa1088790 | Msa1287810 | 0.805591 | 1.239786e-49 | -8.615850e-47 |
Msa1091900 | Msa1287810 | 0.806254 | 8.995892e-50 | -8.615850e-47 |
Msa1092990 | Msa1287810 | 0.922568 | 8.297371e-89 | -8.615850e-47 |
Msa1096580 | Msa1287810 | 0.848486 | 5.944461e-60 | -8.615850e-47 |
Msa1099970 | Msa1287810 | 0.822459 | 2.342539e-53 | -8.615850e-47 |
Msa1100980 | Msa1287810 | 0.942990 | 2.690931e-102 | -8.615850e-47 |
Msa0247260 | Msa1287810 | 0.835400 | 1.715025e-56 | -8.615850e-47 |
Msa0251320 | Msa1287810 | 0.805947 | 1.043572e-49 | -8.615850e-47 |
Msa0256440 | Msa1287810 | 0.815508 | 8.916785e-52 | -8.615850e-47 |
Msa0264450 | Msa1287810 | 0.801594 | 8.366361e-49 | -8.615850e-47 |
Msa0267000 | Msa1287810 | 0.948285 | 1.278751e-106 | -8.615850e-47 |
Msa0267010 | Msa1287810 | 0.953193 | 4.698637e-111 | -8.615850e-47 |
Msa0270520 | Msa1287810 | 0.859971 | 2.858251e-63 | -8.615850e-47 |
Msa0282310 | Msa1287810 | 0.847027 | 1.498874e-59 | -8.615850e-47 |
Msa0285810 | Msa1287810 | 0.853107 | 2.973094e-61 | -8.615850e-47 |
Msa0290870 | Msa1287810 | 0.804135 | 2.497792e-49 | -8.615850e-47 |
Msa0304170 | Msa1287810 | 0.880236 | 6.479579e-70 | -8.615850e-47 |
Msa0306460 | Msa1287810 | 0.870585 | 1.305286e-66 | -8.615850e-47 |
Msa0309020 | Msa1287810 | 0.816487 | 5.393256e-52 | -8.615850e-47 |
Msa0313760 | Msa1287810 | 0.854584 | 1.116417e-61 | -8.615850e-47 |
Msa0337900 | Msa1287810 | 0.801360 | 9.340103e-49 | -8.615850e-47 |
Msa0342240 | Msa1287810 | 0.943627 | 8.548523e-103 | -8.615850e-47 |
Msa0359370 | Msa1287810 | 0.807779 | 4.279305e-50 | -8.615850e-47 |
Msa0360510 | Msa1287810 | 0.921623 | 2.822503e-88 | -8.615850e-47 |
Msa0362420 | Msa1287810 | 0.842636 | 2.291127e-58 | -8.615850e-47 |
Msa0363300 | Msa1287810 | 0.859460 | 4.074019e-63 | -8.615850e-47 |
Msa0363750 | Msa1287810 | 0.802071 | 6.675955e-49 | -8.615850e-47 |
Msa1109440 | Msa1287810 | 0.928053 | 4.969598e-92 | -8.615850e-47 |
Msa1111150 | Msa1287810 | 0.802872 | 4.565516e-49 | -8.615850e-47 |
Msa1112300 | Msa1287810 | 0.829264 | 5.672709e-55 | -8.615850e-47 |
Msa1117150 | Msa1287810 | 0.808048 | 3.750172e-50 | -8.615850e-47 |
Msa1121200 | Msa1287810 | 0.915460 | 5.731969e-85 | -8.615850e-47 |
Msa1121480 | Msa1287810 | 0.812092 | 5.044745e-51 | -8.615850e-47 |
Msa1123420 | Msa1287810 | 0.808021 | 3.799899e-50 | -8.615850e-47 |
Msa1135220 | Msa1287810 | 0.819261 | 1.274262e-52 | -8.615850e-47 |
Msa1135740 | Msa1287810 | 0.923625 | 2.075635e-89 | -8.615850e-47 |
Msa1136090 | Msa1287810 | 0.852818 | 3.596738e-61 | -8.615850e-47 |
Msa1146100 | Msa1287810 | 0.817698 | 2.880758e-52 | -8.615850e-47 |
Msa1146110 | Msa1287810 | 0.933104 | 3.117022e-95 | -8.615850e-47 |
Msa1149360 | Msa1287810 | 0.874049 | 9.150540e-68 | -8.615850e-47 |
Msa1150370 | Msa1287810 | 0.901148 | 3.590162e-78 | -8.615850e-47 |
Msa1150640 | Msa1287810 | 0.818708 | 1.702175e-52 | -8.615850e-47 |
Msa1160670 | Msa1287810 | 0.816545 | 5.232701e-52 | -8.615850e-47 |
Msa1164120 | Msa1287810 | 0.846326 | 2.329740e-59 | -8.615850e-47 |
Msa1173920 | Msa1287810 | 0.882559 | 9.411164e-71 | -8.615850e-47 |
Msa1178340 | Msa1287810 | 0.836505 | 8.995182e-57 | -8.615850e-47 |
Msa1182090 | Msa1287810 | 0.827990 | 1.152565e-54 | -8.615850e-47 |
Msa1184420 | Msa1287810 | 0.824253 | 8.924144e-54 | -8.615850e-47 |
Msa1187940 | Msa1287810 | 0.916427 | 1.804730e-85 | -8.615850e-47 |
Msa1187950 | Msa1287810 | 0.897696 | 1.094425e-76 | -8.615850e-47 |
Msa1192640 | Msa1287810 | 0.954187 | 5.201141e-112 | -8.615850e-47 |
Msa1193730 | Msa1287810 | 0.860711 | 1.707152e-63 | -8.615850e-47 |
Msa0485030 | Msa1287810 | 0.867685 | 1.140910e-65 | -8.615850e-47 |
Msa0485370 | Msa1287810 | 0.803023 | 4.248220e-49 | -8.615850e-47 |
Msa0491590 | Msa1287810 | 0.907696 | 3.833182e-81 | -8.615850e-47 |
Msa0500170 | Msa1287810 | 0.811274 | 7.598373e-51 | -8.615850e-47 |
Msa0502760 | Msa1287810 | 0.865097 | 7.557872e-65 | -8.615850e-47 |
Msa0505080 | Msa1287810 | 0.814796 | 1.283758e-51 | -8.615850e-47 |
Msa0506190 | Msa1287810 | 0.841021 | 6.117360e-58 | -8.615850e-47 |
Msa0506270 | Msa1287810 | 0.874072 | 8.986780e-68 | -8.615850e-47 |
Msa0518540 | Msa1287810 | 0.805329 | 1.407037e-49 | -8.615850e-47 |
Msa0534540 | Msa1287810 | 0.862778 | 3.981200e-64 | -8.615850e-47 |
Msa0548060 | Msa1287810 | 0.813028 | 3.149227e-51 | -8.615850e-47 |
Msa0564890 | Msa1287810 | 0.934820 | 2.232172e-96 | -8.615850e-47 |
Msa0589780 | Msa1287810 | 0.807987 | 3.864938e-50 | -8.615850e-47 |
Msa0590780 | Msa1287810 | 0.820269 | 7.499472e-53 | -8.615850e-47 |
Msa0596150 | Msa1287810 | 0.880166 | 6.863459e-70 | -8.615850e-47 |
Msa0598780 | Msa1287810 | 0.814703 | 1.345871e-51 | -8.615850e-47 |
Msa0600700 | Msa1287810 | 0.802507 | 5.430041e-49 | -8.615850e-47 |
Msa0845930 | Msa1287810 | 0.832567 | 8.782541e-56 | -8.615850e-47 |
Msa0846210 | Msa1287810 | 0.865337 | 6.353083e-65 | -8.615850e-47 |
Msa0846330 | Msa1287810 | 0.900482 | 7.007375e-78 | -8.615850e-47 |
Msa0846350 | Msa1287810 | 0.900346 | 8.035056e-78 | -8.615850e-47 |
Msa0848960 | Msa1287810 | 0.872972 | 2.108393e-67 | -8.615850e-47 |
Msa0851390 | Msa1287810 | 0.801464 | 8.896090e-49 | -8.615850e-47 |
Msa0854980 | Msa1287810 | 0.852419 | 4.674806e-61 | -8.615850e-47 |
Msa0858980 | Msa1287810 | 0.883689 | 3.628827e-71 | -8.615850e-47 |
Msa0858990 | Msa1287810 | 0.807974 | 3.887987e-50 | -8.615850e-47 |
Msa0865320 | Msa1287810 | 0.934371 | 4.476473e-96 | -8.615850e-47 |
Msa0866810 | Msa1287810 | 0.824913 | 6.237037e-54 | -8.615850e-47 |
Msa0872230 | Msa1287810 | 0.877533 | 5.824467e-69 | -8.615850e-47 |
Msa0873460 | Msa1287810 | 0.844511 | 7.225827e-59 | -8.615850e-47 |
Msa0884150 | Msa1287810 | 0.811248 | 7.697154e-51 | -8.615850e-47 |
Msa0885280 | Msa1287810 | 0.819547 | 1.096803e-52 | -8.615850e-47 |
Msa0885290 | Msa1287810 | 0.875817 | 2.284412e-68 | -8.615850e-47 |
Msa0887920 | Msa1287810 | 0.846891 | 1.633657e-59 | -8.615850e-47 |
Msa0888370 | Msa1287810 | 0.904922 | 7.392359e-80 | -8.615850e-47 |
Msa0888420 | Msa1287810 | 0.872757 | 2.487845e-67 | -8.615850e-47 |
Msa0889850 | Msa1287810 | 0.819233 | 1.293089e-52 | -8.615850e-47 |
Msa0895270 | Msa1287810 | 0.835361 | 1.754634e-56 | -8.615850e-47 |
Msa0896080 | Msa1287810 | 0.874734 | 5.356789e-68 | -8.615850e-47 |
Msa0898080 | Msa1287810 | 0.812683 | 3.748163e-51 | -8.615850e-47 |
Msa0899250 | Msa1287810 | 0.819914 | 9.041162e-53 | -8.615850e-47 |
Msa0899430 | Msa1287810 | 0.824385 | 8.307670e-54 | -8.615850e-47 |
Msa0899450 | Msa1287810 | 0.808972 | 2.381951e-50 | -8.615850e-47 |
Msa0907260 | Msa1287810 | 0.843902 | 1.052933e-58 | -8.615850e-47 |
Msa0914760 | Msa1287810 | 0.852665 | 3.977714e-61 | -8.615850e-47 |
Msa0922150 | Msa1287810 | 0.807658 | 4.539591e-50 | -8.615850e-47 |
Msa0952190 | Msa1287810 | 0.828084 | 1.094145e-54 | -8.615850e-47 |
Msa0952350 | Msa1287810 | 0.837178 | 6.060193e-57 | -8.615850e-47 |
Msa0952720 | Msa1287810 | 0.860791 | 1.614368e-63 | -8.615850e-47 |
Msa0954020 | Msa1287810 | 0.803970 | 2.702821e-49 | -8.615850e-47 |
Msa0954910 | Msa1287810 | 0.822855 | 1.895003e-53 | -8.615850e-47 |
Msa0956270 | Msa1287810 | 0.847782 | 9.301593e-60 | -8.615850e-47 |
Msa0956940 | Msa1287810 | 0.815076 | 1.112853e-51 | -8.615850e-47 |
Msa0957680 | Msa1287810 | 0.846386 | 2.243645e-59 | -8.615850e-47 |
Msa0957860 | Msa1287810 | 0.834635 | 2.674513e-56 | -8.615850e-47 |
Msa0957960 | Msa1287810 | 0.834381 | 3.096924e-56 | -8.615850e-47 |
Msa0958550 | Msa1287810 | 0.817708 | 2.865882e-52 | -8.615850e-47 |
Msa0966760 | Msa1287810 | 0.806169 | 9.371598e-50 | -8.615850e-47 |
Msa0969260 | Msa1287810 | 0.800188 | 1.620717e-48 | -8.615850e-47 |
Msa0974870 | Msa1287810 | 0.834391 | 3.079082e-56 | -8.615850e-47 |
Msa0979410 | Msa1287810 | 0.808252 | 3.393681e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1287810 | MtrunA17_Chr2g0289121 | 65.769 | 260 | 26 | 3 | 1 | 203 | 357 | 610 | 1.79e-104 | 318 |
Msa1287810 | MtrunA17_Chr8g0361381 | 61.905 | 210 | 21 | 3 | 49 | 201 | 1 | 208 | 1.97e-80 | 239 |
Msa1287810 | MtrunA17_Chr2g0289031 | 80.800 | 125 | 17 | 1 | 86 | 203 | 70 | 194 | 2.82e-69 | 216 |
Msa1287810 | MtrunA17_Chr2g0289091 | 86.792 | 106 | 14 | 0 | 98 | 203 | 28 | 133 | 6.93e-62 | 198 |
Msa1287810 | MtrunA17_Chr4g0075261 | 64.234 | 137 | 42 | 1 | 74 | 203 | 484 | 620 | 1.53e-56 | 191 |
Msa1287810 | MtrunA17_Chr1g0211711 | 60.000 | 125 | 43 | 1 | 86 | 203 | 706 | 830 | 1.20e-43 | 155 |
Msa1287810 | MtrunA17_Chr1g0147021 | 59.542 | 131 | 45 | 2 | 80 | 203 | 1203 | 1332 | 1.49e-43 | 155 |
Msa1287810 | MtrunA17_Chr1g0183311 | 59.200 | 125 | 44 | 1 | 86 | 203 | 511 | 635 | 1.47e-42 | 152 |
Msa1287810 | MtrunA17_Chr1g0211691 | 58.400 | 125 | 45 | 1 | 86 | 203 | 711 | 835 | 6.44e-42 | 150 |
Msa1287810 | MtrunA17_Chr7g0275771 | 53.435 | 131 | 54 | 1 | 80 | 203 | 508 | 638 | 5.31e-41 | 147 |
Msa1287810 | MtrunA17_Chr5g0426961 | 56.800 | 125 | 47 | 1 | 86 | 203 | 507 | 631 | 3.29e-40 | 145 |
Msa1287810 | MtrunA17_Chr1g0211661 | 55.200 | 125 | 49 | 1 | 86 | 203 | 591 | 715 | 2.14e-39 | 143 |
Msa1287810 | MtrunA17_Chr5g0420361 | 55.072 | 138 | 47 | 5 | 77 | 203 | 429 | 562 | 1.03e-36 | 135 |
Msa1287810 | MtrunA17_Chr5g0448301 | 49.600 | 125 | 53 | 2 | 88 | 203 | 388 | 511 | 5.31e-34 | 127 |
Msa1287810 | MtrunA17_Chr7g0231061 | 52.830 | 106 | 50 | 0 | 98 | 203 | 30 | 135 | 2.58e-33 | 118 |
Msa1287810 | MtrunA17_Chr6g0472441 | 50.000 | 124 | 58 | 2 | 77 | 200 | 376 | 495 | 1.95e-31 | 120 |
Msa1287810 | MtrunA17_Chr2g0289101 | 81.538 | 65 | 12 | 0 | 1 | 65 | 81 | 145 | 3.96e-31 | 111 |
Msa1287810 | MtrunA17_Chr1g0192011 | 48.092 | 131 | 61 | 1 | 80 | 203 | 588 | 718 | 7.79e-30 | 115 |
Msa1287810 | MtrunA17_Chr8g0340381 | 59.770 | 87 | 31 | 2 | 114 | 200 | 36 | 118 | 3.98e-28 | 104 |
Msa1287810 | MtrunA17_Chr4g0048531 | 42.056 | 107 | 60 | 1 | 97 | 203 | 888 | 992 | 1.30e-17 | 80.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1287810 | AT1G11950.2 | 69.118 | 136 | 35 | 1 | 75 | 203 | 532 | 667 | 2.21e-59 | 199 |
Msa1287810 | AT1G11950.1 | 69.118 | 136 | 35 | 1 | 75 | 203 | 532 | 667 | 2.78e-59 | 199 |
Msa1287810 | AT1G11950.3 | 69.118 | 136 | 35 | 1 | 75 | 203 | 532 | 667 | 2.78e-59 | 199 |
Msa1287810 | AT1G62310.1 | 66.667 | 141 | 37 | 2 | 70 | 203 | 548 | 685 | 1.71e-57 | 194 |
Msa1287810 | AT4G00990.1 | 55.634 | 142 | 56 | 1 | 69 | 203 | 414 | 555 | 5.67e-45 | 159 |
Msa1287810 | AT4G00990.2 | 55.634 | 142 | 56 | 1 | 69 | 203 | 414 | 555 | 6.73e-45 | 159 |
Msa1287810 | AT4G00990.3 | 55.634 | 142 | 56 | 1 | 69 | 203 | 414 | 555 | 6.75e-45 | 159 |
Msa1287810 | AT3G07610.1 | 49.296 | 142 | 62 | 2 | 69 | 203 | 550 | 688 | 3.12e-36 | 134 |
Msa1287810 | AT3G07610.2 | 50.000 | 140 | 60 | 2 | 69 | 201 | 550 | 686 | 1.03e-35 | 133 |
Msa1287810 | AT3G07610.3 | 49.640 | 139 | 60 | 2 | 69 | 200 | 550 | 685 | 2.13e-35 | 132 |
Msa1287810 | AT1G09060.2 | 42.742 | 124 | 64 | 1 | 87 | 203 | 537 | 660 | 6.37e-22 | 93.6 |
Msa1287810 | AT1G09060.1 | 42.742 | 124 | 64 | 1 | 87 | 203 | 537 | 660 | 6.37e-22 | 93.6 |
Msa1287810 | AT1G09060.4 | 42.742 | 124 | 64 | 1 | 87 | 203 | 551 | 674 | 6.63e-22 | 93.6 |
Msa1287810 | AT1G09060.3 | 42.742 | 124 | 64 | 1 | 87 | 203 | 551 | 674 | 6.63e-22 | 93.6 |
Msa1287810 | AT4G21430.1 | 32.593 | 135 | 81 | 2 | 77 | 201 | 540 | 674 | 3.03e-14 | 71.2 |
Find 43 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTGGGAGGATATCTAAAT+TGG | 0.230202 | 8_3:-39415885 | Msa1287810:CDS |
CCACAACCACCTAGTTCTTT+TGG | 0.232816 | 8_3:+39415941 | None:intergenic |
GAAGAAGATATATAAATTTC+TGG | 0.245625 | 8_3:-39414913 | Msa1287810:CDS |
TGTAAAGGCTATTGATTGTT+TGG | 0.292387 | 8_3:-39415593 | Msa1287810:CDS |
TCCTCCGCCAAGCTCTTCTT+TGG | 0.300657 | 8_3:+39414688 | None:intergenic |
GAGCTTGGCGGAGGAGATTC+TGG | 0.313047 | 8_3:-39414680 | Msa1287810:CDS |
ATCACTATTCACATTCCATT+TGG | 0.366620 | 8_3:+39415982 | None:intergenic |
TACAAAACTCCATTGTGATA+TGG | 0.386545 | 8_3:-39414657 | Msa1287810:CDS |
GACACTCGCCAGTTCTTTGA+AGG | 0.395120 | 8_3:-39414947 | Msa1287810:intron |
CTGAAACGCATCCTTCCAAT+TGG | 0.403918 | 8_3:-39415902 | Msa1287810:CDS |
AATTTAGATATCCTCCCAAT+TGG | 0.438740 | 8_3:+39415887 | None:intergenic |
GGATCACTATACTCTTGAAA+TGG | 0.474382 | 8_3:+39414800 | None:intergenic |
GAGTATAGTGATCCTCGATC+TGG | 0.478549 | 8_3:-39414791 | Msa1287810:CDS |
AGAGGGTCATGTTGACCAAA+TGG | 0.479022 | 8_3:-39415997 | None:intergenic |
GTTCTTTGAAGGTTATAAAG+AGG | 0.497551 | 8_3:-39414936 | Msa1287810:CDS |
TGGTTGTGGTGGCTGTGTGA+TGG | 0.522574 | 8_3:-39415927 | Msa1287810:CDS |
TGAGGTCACTTGACATTGGA+TGG | 0.536039 | 8_3:+39415759 | None:intergenic |
AGATGATAACTCAAATGTAA+AGG | 0.540070 | 8_3:-39415608 | Msa1287810:CDS |
ACCAAAGAAGAGCTTGGCGG+AGG | 0.542386 | 8_3:-39414689 | Msa1287810:CDS |
CATGTCATAAAGCCTGACTT+AGG | 0.552096 | 8_3:-39414737 | Msa1287810:CDS |
TTCTTTGAAGGTTATAAAGA+GGG | 0.554859 | 8_3:-39414935 | Msa1287810:CDS |
CCAAAAGAACTAGGTGGTTG+TGG | 0.561255 | 8_3:-39415941 | Msa1287810:CDS |
TGAAACGCATCCTTCCAATT+GGG | 0.562137 | 8_3:-39415901 | Msa1287810:CDS |
AAGATATATAAATTTCTGGC+CGG | 0.566135 | 8_3:-39414909 | Msa1287810:CDS |
TCTATGAGGTCACTTGACAT+TGG | 0.566511 | 8_3:+39415755 | None:intergenic |
TAGATATCCTCCCAATTGGA+AGG | 0.569060 | 8_3:+39415891 | None:intergenic |
AGATGCTCAAGCTAAAAGAC+TGG | 0.578780 | 8_3:-39414886 | Msa1287810:CDS |
TATGGAACCAAAGAAGAGCT+TGG | 0.585851 | 8_3:-39414695 | Msa1287810:CDS |
GTGGTGGCAACTTTGCAGCA+AGG | 0.598809 | 8_3:+39414759 | None:intergenic |
AACGGATAAACTCGTCACAA+AGG | 0.603909 | 8_3:+39414828 | None:intergenic |
TGATTGTTTGGCTAGTTGTG+AGG | 0.604417 | 8_3:-39415581 | Msa1287810:intron |
GGAACCAAAGAAGAGCTTGG+CGG | 0.614905 | 8_3:-39414692 | Msa1287810:CDS |
TCAGGCTTTATGACATGTGG+TGG | 0.618540 | 8_3:+39414743 | None:intergenic |
GAATGTGCTCCAAAAGAACT+AGG | 0.632610 | 8_3:-39415950 | Msa1287810:CDS |
AGGTTTAGAATTCCAGATCG+AGG | 0.639738 | 8_3:+39414779 | None:intergenic |
AAGTCAGGCTTTATGACATG+TGG | 0.640339 | 8_3:+39414740 | None:intergenic |
ACTCTTGAAATGGCAAACAA+CGG | 0.651117 | 8_3:+39414810 | None:intergenic |
AACGCATCCTTCCAATTGGG+AGG | 0.652477 | 8_3:-39415898 | Msa1287810:CDS |
CCATTGTGATATGGCAGACG+CGG | 0.656520 | 8_3:-39414648 | Msa1287810:intron |
CCGCGTCTGCCATATCACAA+TGG | 0.685598 | 8_3:+39414648 | None:intergenic |
AAAGAACTAGGTGGTTGTGG+TGG | 0.707130 | 8_3:-39415938 | Msa1287810:CDS |
ATAAACTCGTCACAAAGGCG+CGG | 0.715118 | 8_3:+39414833 | None:intergenic |
TGTGCTCCAAAAGAACTAGG+TGG | 0.792037 | 8_3:-39415947 | Msa1287810:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTTAAATTCCAAAAATAC+TGG | - | chr8_3:39414780-39414799 | Msa1287810:CDS | 15.0% |
!! | TGATCAAATAATCTAATAAT+AGG | - | chr8_3:39415050-39415069 | Msa1287810:intron | 15.0% |
!! | CTAAAATATTAATAATGAGT+TGG | + | chr8_3:39415446-39415465 | None:intergenic | 15.0% |
!!! | TAAGTTTAATTTATTGTTCA+AGG | - | chr8_3:39415942-39415961 | Msa1287810:CDS | 15.0% |
!! | TATTTAAATTCCAAAAATAC+TGG | - | chr8_3:39414780-39414799 | Msa1287810:CDS | 15.0% |
!! | TGATCAAATAATCTAATAAT+AGG | - | chr8_3:39415050-39415069 | Msa1287810:intron | 15.0% |
!! | CTAAAATATTAATAATGAGT+TGG | + | chr8_3:39415446-39415465 | None:intergenic | 15.0% |
!!! | TAAGTTTAATTTATTGTTCA+AGG | - | chr8_3:39415942-39415961 | Msa1287810:CDS | 15.0% |
!!! | AAATAGCTTTTTTTTCTATG+AGG | + | chr8_3:39414765-39414784 | None:intergenic | 20.0% |
!! | TCAAATAATCTAATAATAGG+AGG | - | chr8_3:39415053-39415072 | Msa1287810:intron | 20.0% |
!! | ATATAAAAATCGCAAAAGAT+TGG | - | chr8_3:39415298-39415317 | Msa1287810:intron | 20.0% |
!! | GAAGAAGATATATAAATTTC+TGG | - | chr8_3:39415590-39415609 | Msa1287810:CDS | 20.0% |
!!! | AAATAGCTTTTTTTTCTATG+AGG | + | chr8_3:39414765-39414784 | None:intergenic | 20.0% |
!! | TCAAATAATCTAATAATAGG+AGG | - | chr8_3:39415053-39415072 | Msa1287810:intron | 20.0% |
!! | ATATAAAAATCGCAAAAGAT+TGG | - | chr8_3:39415298-39415317 | Msa1287810:intron | 20.0% |
!! | GAAGAAGATATATAAATTTC+TGG | - | chr8_3:39415590-39415609 | Msa1287810:CDS | 20.0% |
! | TGCAAAAATGTTTCTTCAAA+TGG | + | chr8_3:39414657-39414676 | None:intergenic | 25.0% |
! | AGATGATAACTCAAATGTAA+AGG | - | chr8_3:39414895-39414914 | Msa1287810:CDS | 25.0% |
! | TAGTTGAATTTGAATTGTCT+AGG | - | chr8_3:39415009-39415028 | Msa1287810:intron | 25.0% |
! | TTCCAACTACATATTTGTTT+AGG | + | chr8_3:39415079-39415098 | None:intergenic | 25.0% |
! | TAAACAAATATGTAGTTGGA+AGG | - | chr8_3:39415078-39415097 | Msa1287810:intron | 25.0% |
!! | AAAAAACATCAATTTTGTGC+TGG | + | chr8_3:39415162-39415181 | None:intergenic | 25.0% |
! | TCCCTTAAAGAAAATATGTT+CGG | - | chr8_3:39415231-39415250 | Msa1287810:intron | 25.0% |
!! | TCCGAACATATTTTCTTTAA+GGG | + | chr8_3:39415235-39415254 | None:intergenic | 25.0% |
!! | ATCCGAACATATTTTCTTTA+AGG | + | chr8_3:39415236-39415255 | None:intergenic | 25.0% |
! | TTTCATAGTTACATTTCCTT+TGG | - | chr8_3:39415376-39415395 | Msa1287810:intron | 25.0% |
!! | TTACACTTTAGAAAAACATG+TGG | - | chr8_3:39415411-39415430 | Msa1287810:intron | 25.0% |
! | TTACATAGGGAGATAAATAT+TGG | + | chr8_3:39415517-39415536 | None:intergenic | 25.0% |
!! | TTCTTTGAAGGTTATAAAGA+GGG | - | chr8_3:39415568-39415587 | Msa1287810:intron | 25.0% |
!!! | AAGATATATAAATTTCTGGC+CGG | - | chr8_3:39415594-39415613 | Msa1287810:CDS | 25.0% |
!! | ACATTTTCAAACTCATCATA+AGG | + | chr8_3:39415646-39415665 | None:intergenic | 25.0% |
!!! | TATTTTGACTCATATAACTC+AGG | - | chr8_3:39415969-39415988 | Msa1287810:CDS | 25.0% |
! | TGCAAAAATGTTTCTTCAAA+TGG | + | chr8_3:39414657-39414676 | None:intergenic | 25.0% |
! | AGATGATAACTCAAATGTAA+AGG | - | chr8_3:39414895-39414914 | Msa1287810:CDS | 25.0% |
! | TAGTTGAATTTGAATTGTCT+AGG | - | chr8_3:39415009-39415028 | Msa1287810:intron | 25.0% |
! | TTCCAACTACATATTTGTTT+AGG | + | chr8_3:39415079-39415098 | None:intergenic | 25.0% |
! | TAAACAAATATGTAGTTGGA+AGG | - | chr8_3:39415078-39415097 | Msa1287810:intron | 25.0% |
!! | AAAAAACATCAATTTTGTGC+TGG | + | chr8_3:39415162-39415181 | None:intergenic | 25.0% |
! | TCCCTTAAAGAAAATATGTT+CGG | - | chr8_3:39415231-39415250 | Msa1287810:intron | 25.0% |
!! | TCCGAACATATTTTCTTTAA+GGG | + | chr8_3:39415235-39415254 | None:intergenic | 25.0% |
!! | ATCCGAACATATTTTCTTTA+AGG | + | chr8_3:39415236-39415255 | None:intergenic | 25.0% |
! | TTTCATAGTTACATTTCCTT+TGG | - | chr8_3:39415376-39415395 | Msa1287810:intron | 25.0% |
!! | TTACACTTTAGAAAAACATG+TGG | - | chr8_3:39415411-39415430 | Msa1287810:intron | 25.0% |
! | TTACATAGGGAGATAAATAT+TGG | + | chr8_3:39415517-39415536 | None:intergenic | 25.0% |
!! | TTCTTTGAAGGTTATAAAGA+GGG | - | chr8_3:39415568-39415587 | Msa1287810:intron | 25.0% |
!!! | AAGATATATAAATTTCTGGC+CGG | - | chr8_3:39415594-39415613 | Msa1287810:CDS | 25.0% |
!! | ACATTTTCAAACTCATCATA+AGG | + | chr8_3:39415646-39415665 | None:intergenic | 25.0% |
!!! | TATTTTGACTCATATAACTC+AGG | - | chr8_3:39415969-39415988 | Msa1287810:CDS | 25.0% |
ATCACTATTCACATTCCATT+TGG | + | chr8_3:39414524-39414543 | None:intergenic | 30.0% | |
AATTTAGATATCCTCCCAAT+TGG | + | chr8_3:39414619-39414638 | None:intergenic | 30.0% | |
AATTGGGAGGATATCTAAAT+TGG | - | chr8_3:39414618-39414637 | Msa1287810:intron | 30.0% | |
TTCCAAAAATACTGGAGAAA+CGG | - | chr8_3:39414788-39414807 | Msa1287810:CDS | 30.0% | |
AGAACGTAAGATATTAGAAC+GGG | + | chr8_3:39414818-39414837 | None:intergenic | 30.0% | |
GAGAACGTAAGATATTAGAA+CGG | + | chr8_3:39414819-39414838 | None:intergenic | 30.0% | |
ATATCTTACGTTCTCAAACA+AGG | - | chr8_3:39414824-39414843 | Msa1287810:CDS | 30.0% | |
TATCTTACGTTCTCAAACAA+GGG | - | chr8_3:39414825-39414844 | Msa1287810:CDS | 30.0% | |
! | TGTAAAGGCTATTGATTGTT+TGG | - | chr8_3:39414910-39414929 | Msa1287810:CDS | 30.0% |
!!! | TGTGTGATTTTTTAGAAACG+CGG | + | chr8_3:39415117-39415136 | None:intergenic | 30.0% |
TACTTGCAAAGGTTTACATA+GGG | + | chr8_3:39415530-39415549 | None:intergenic | 30.0% | |
TTACTTGCAAAGGTTTACAT+AGG | + | chr8_3:39415531-39415550 | None:intergenic | 30.0% | |
CTTTATAACCTTCAAAGAAC+TGG | + | chr8_3:39415567-39415586 | None:intergenic | 30.0% | |
! | GTTCTTTGAAGGTTATAAAG+AGG | - | chr8_3:39415567-39415586 | Msa1287810:intron | 30.0% |
! | TTTTCAAACTCATCATAAGG+TGG | + | chr8_3:39415643-39415662 | None:intergenic | 30.0% |
TACAAAACTCCATTGTGATA+TGG | - | chr8_3:39415846-39415865 | Msa1287810:CDS | 30.0% | |
ATGTACTTTCAACGCTATAT+TGG | - | chr8_3:39415897-39415916 | Msa1287810:CDS | 30.0% | |
ATCACTATTCACATTCCATT+TGG | + | chr8_3:39414524-39414543 | None:intergenic | 30.0% | |
AATTTAGATATCCTCCCAAT+TGG | + | chr8_3:39414619-39414638 | None:intergenic | 30.0% | |
AATTGGGAGGATATCTAAAT+TGG | - | chr8_3:39414618-39414637 | Msa1287810:intron | 30.0% | |
TTCCAAAAATACTGGAGAAA+CGG | - | chr8_3:39414788-39414807 | Msa1287810:CDS | 30.0% | |
AGAACGTAAGATATTAGAAC+GGG | + | chr8_3:39414818-39414837 | None:intergenic | 30.0% | |
GAGAACGTAAGATATTAGAA+CGG | + | chr8_3:39414819-39414838 | None:intergenic | 30.0% | |
ATATCTTACGTTCTCAAACA+AGG | - | chr8_3:39414824-39414843 | Msa1287810:CDS | 30.0% | |
TATCTTACGTTCTCAAACAA+GGG | - | chr8_3:39414825-39414844 | Msa1287810:CDS | 30.0% | |
! | TGTAAAGGCTATTGATTGTT+TGG | - | chr8_3:39414910-39414929 | Msa1287810:CDS | 30.0% |
!!! | TGTGTGATTTTTTAGAAACG+CGG | + | chr8_3:39415117-39415136 | None:intergenic | 30.0% |
TACTTGCAAAGGTTTACATA+GGG | + | chr8_3:39415530-39415549 | None:intergenic | 30.0% | |
TTACTTGCAAAGGTTTACAT+AGG | + | chr8_3:39415531-39415550 | None:intergenic | 30.0% | |
CTTTATAACCTTCAAAGAAC+TGG | + | chr8_3:39415567-39415586 | None:intergenic | 30.0% | |
! | GTTCTTTGAAGGTTATAAAG+AGG | - | chr8_3:39415567-39415586 | Msa1287810:intron | 30.0% |
! | TTTTCAAACTCATCATAAGG+TGG | + | chr8_3:39415643-39415662 | None:intergenic | 30.0% |
TACAAAACTCCATTGTGATA+TGG | - | chr8_3:39415846-39415865 | Msa1287810:CDS | 30.0% | |
ATGTACTTTCAACGCTATAT+TGG | - | chr8_3:39415897-39415916 | Msa1287810:CDS | 30.0% | |
! | TCTAGGTCTAAAGCGTATAA+AGG | - | chr8_3:39415026-39415045 | Msa1287810:intron | 35.0% |
GGCCTAAACAAATATGTAGT+TGG | - | chr8_3:39415074-39415093 | Msa1287810:intron | 35.0% | |
ATTACACCTCACCAAAGATA+CGG | + | chr8_3:39415210-39415229 | None:intergenic | 35.0% | |
!! | CTTTCAACATTGGTGCTTTT+AGG | - | chr8_3:39415275-39415294 | Msa1287810:intron | 35.0% |
TGACAGCATATGTCACATTT+GGG | + | chr8_3:39415327-39415346 | None:intergenic | 35.0% | |
TTGACAGCATATGTCACATT+TGG | + | chr8_3:39415328-39415347 | None:intergenic | 35.0% | |
! | GTGTCAATTGTTACTTGCAA+AGG | + | chr8_3:39415541-39415560 | None:intergenic | 35.0% |
ACTCTTGAAATGGCAAACAA+CGG | + | chr8_3:39415696-39415715 | None:intergenic | 35.0% | |
GGATCACTATACTCTTGAAA+TGG | + | chr8_3:39415706-39415725 | None:intergenic | 35.0% | |
! | TAAGTTTTTGCACCTAAGTC+AGG | + | chr8_3:39415781-39415800 | None:intergenic | 35.0% |
GCAAAAACTTACGTTGCTTA+TGG | - | chr8_3:39415790-39415809 | Msa1287810:CDS | 35.0% | |
! | TCTAGGTCTAAAGCGTATAA+AGG | - | chr8_3:39415026-39415045 | Msa1287810:intron | 35.0% |
GGCCTAAACAAATATGTAGT+TGG | - | chr8_3:39415074-39415093 | Msa1287810:intron | 35.0% | |
ATTACACCTCACCAAAGATA+CGG | + | chr8_3:39415210-39415229 | None:intergenic | 35.0% | |
!! | CTTTCAACATTGGTGCTTTT+AGG | - | chr8_3:39415275-39415294 | Msa1287810:intron | 35.0% |
TGACAGCATATGTCACATTT+GGG | + | chr8_3:39415327-39415346 | None:intergenic | 35.0% | |
TTGACAGCATATGTCACATT+TGG | + | chr8_3:39415328-39415347 | None:intergenic | 35.0% | |
! | GTGTCAATTGTTACTTGCAA+AGG | + | chr8_3:39415541-39415560 | None:intergenic | 35.0% |
ACTCTTGAAATGGCAAACAA+CGG | + | chr8_3:39415696-39415715 | None:intergenic | 35.0% | |
GGATCACTATACTCTTGAAA+TGG | + | chr8_3:39415706-39415725 | None:intergenic | 35.0% | |
! | TAAGTTTTTGCACCTAAGTC+AGG | + | chr8_3:39415781-39415800 | None:intergenic | 35.0% |
GCAAAAACTTACGTTGCTTA+TGG | - | chr8_3:39415790-39415809 | Msa1287810:CDS | 35.0% | |
GAATGTGCTCCAAAAGAACT+AGG | - | chr8_3:39414553-39414572 | Msa1287810:intron | 40.0% | |
TGAAACGCATCCTTCCAATT+GGG | - | chr8_3:39414602-39414621 | Msa1287810:intron | 40.0% | |
TAGATATCCTCCCAATTGGA+AGG | + | chr8_3:39414615-39414634 | None:intergenic | 40.0% | |
TCTATGAGGTCACTTGACAT+TGG | + | chr8_3:39414751-39414770 | None:intergenic | 40.0% | |
ATCTGAACAGACACTTGAAG+AGG | + | chr8_3:39414879-39414898 | None:intergenic | 40.0% | |
! | TGATTGTTTGGCTAGTTGTG+AGG | - | chr8_3:39414922-39414941 | Msa1287810:CDS | 40.0% |
GTTGTGAGGTATGCTTTCTT+TGG | - | chr8_3:39414936-39414955 | Msa1287810:CDS | 40.0% | |
AAATTTCCTCCCCGTATCTT+TGG | - | chr8_3:39415196-39415215 | Msa1287810:intron | 40.0% | |
TTACACCTCACCAAAGATAC+GGG | + | chr8_3:39415209-39415228 | None:intergenic | 40.0% | |
AAGAGCGAGTCTTTCAACAT+TGG | - | chr8_3:39415265-39415284 | Msa1287810:intron | 40.0% | |
GTAAGAACGAACATCACCAA+AGG | + | chr8_3:39415395-39415414 | None:intergenic | 40.0% | |
!!! | TCTTTTAGCTTGAGCATCTC+CGG | + | chr8_3:39415616-39415635 | None:intergenic | 40.0% |
AGATGCTCAAGCTAAAAGAC+TGG | - | chr8_3:39415617-39415636 | Msa1287810:intron | 40.0% | |
AACGGATAAACTCGTCACAA+AGG | + | chr8_3:39415678-39415697 | None:intergenic | 40.0% | |
! | AGGTTTAGAATTCCAGATCG+AGG | + | chr8_3:39415727-39415746 | None:intergenic | 40.0% |
! | AAGTCAGGCTTTATGACATG+TGG | + | chr8_3:39415766-39415785 | None:intergenic | 40.0% |
CATGTCATAAAGCCTGACTT+AGG | - | chr8_3:39415766-39415785 | Msa1287810:intron | 40.0% | |
TATGGAACCAAAGAAGAGCT+TGG | - | chr8_3:39415808-39415827 | Msa1287810:CDS | 40.0% | |
TTGGTGCGACAAGTATATGA+TGG | - | chr8_3:39415916-39415935 | Msa1287810:CDS | 40.0% | |
GAATGTGCTCCAAAAGAACT+AGG | - | chr8_3:39414553-39414572 | Msa1287810:intron | 40.0% | |
TGAAACGCATCCTTCCAATT+GGG | - | chr8_3:39414602-39414621 | Msa1287810:intron | 40.0% | |
TAGATATCCTCCCAATTGGA+AGG | + | chr8_3:39414615-39414634 | None:intergenic | 40.0% | |
TCTATGAGGTCACTTGACAT+TGG | + | chr8_3:39414751-39414770 | None:intergenic | 40.0% | |
ATCTGAACAGACACTTGAAG+AGG | + | chr8_3:39414879-39414898 | None:intergenic | 40.0% | |
! | TGATTGTTTGGCTAGTTGTG+AGG | - | chr8_3:39414922-39414941 | Msa1287810:CDS | 40.0% |
GTTGTGAGGTATGCTTTCTT+TGG | - | chr8_3:39414936-39414955 | Msa1287810:CDS | 40.0% | |
AAATTTCCTCCCCGTATCTT+TGG | - | chr8_3:39415196-39415215 | Msa1287810:intron | 40.0% | |
TTACACCTCACCAAAGATAC+GGG | + | chr8_3:39415209-39415228 | None:intergenic | 40.0% | |
AAGAGCGAGTCTTTCAACAT+TGG | - | chr8_3:39415265-39415284 | Msa1287810:intron | 40.0% | |
GTAAGAACGAACATCACCAA+AGG | + | chr8_3:39415395-39415414 | None:intergenic | 40.0% | |
!!! | TCTTTTAGCTTGAGCATCTC+CGG | + | chr8_3:39415616-39415635 | None:intergenic | 40.0% |
AGATGCTCAAGCTAAAAGAC+TGG | - | chr8_3:39415617-39415636 | Msa1287810:intron | 40.0% | |
AACGGATAAACTCGTCACAA+AGG | + | chr8_3:39415678-39415697 | None:intergenic | 40.0% | |
! | AGGTTTAGAATTCCAGATCG+AGG | + | chr8_3:39415727-39415746 | None:intergenic | 40.0% |
! | AAGTCAGGCTTTATGACATG+TGG | + | chr8_3:39415766-39415785 | None:intergenic | 40.0% |
CATGTCATAAAGCCTGACTT+AGG | - | chr8_3:39415766-39415785 | Msa1287810:intron | 40.0% | |
TATGGAACCAAAGAAGAGCT+TGG | - | chr8_3:39415808-39415827 | Msa1287810:CDS | 40.0% | |
TTGGTGCGACAAGTATATGA+TGG | - | chr8_3:39415916-39415935 | Msa1287810:CDS | 40.0% | |
TGTGCTCCAAAAGAACTAGG+TGG | - | chr8_3:39414556-39414575 | Msa1287810:intron | 45.0% | |
!! | CCACAACCACCTAGTTCTTT+TGG | + | chr8_3:39414565-39414584 | None:intergenic | 45.0% |
CCAAAAGAACTAGGTGGTTG+TGG | - | chr8_3:39414562-39414581 | Msa1287810:intron | 45.0% | |
AAAGAACTAGGTGGTTGTGG+TGG | - | chr8_3:39414565-39414584 | Msa1287810:intron | 45.0% | |
CTGAAACGCATCCTTCCAAT+TGG | - | chr8_3:39414601-39414620 | Msa1287810:intron | 45.0% | |
TGAGGTCACTTGACATTGGA+TGG | + | chr8_3:39414747-39414766 | None:intergenic | 45.0% | |
! | CGCCGTTTCTCCAGTATTTT+TGG | + | chr8_3:39414793-39414812 | None:intergenic | 45.0% |
TACGTTCTCAAACAAGGGAC+AGG | - | chr8_3:39414830-39414849 | Msa1287810:CDS | 45.0% | |
TACACCTCACCAAAGATACG+GGG | + | chr8_3:39415208-39415227 | None:intergenic | 45.0% | |
ATAAACTCGTCACAAAGGCG+CGG | + | chr8_3:39415673-39415692 | None:intergenic | 45.0% | |
GAGTATAGTGATCCTCGATC+TGG | - | chr8_3:39415712-39415731 | Msa1287810:intron | 45.0% | |
! | TCAGGCTTTATGACATGTGG+TGG | + | chr8_3:39415763-39415782 | None:intergenic | 45.0% |
TGTGCTCCAAAAGAACTAGG+TGG | - | chr8_3:39414556-39414575 | Msa1287810:intron | 45.0% | |
!! | CCACAACCACCTAGTTCTTT+TGG | + | chr8_3:39414565-39414584 | None:intergenic | 45.0% |
CCAAAAGAACTAGGTGGTTG+TGG | - | chr8_3:39414562-39414581 | Msa1287810:intron | 45.0% | |
AAAGAACTAGGTGGTTGTGG+TGG | - | chr8_3:39414565-39414584 | Msa1287810:intron | 45.0% | |
CTGAAACGCATCCTTCCAAT+TGG | - | chr8_3:39414601-39414620 | Msa1287810:intron | 45.0% | |
TGAGGTCACTTGACATTGGA+TGG | + | chr8_3:39414747-39414766 | None:intergenic | 45.0% | |
! | CGCCGTTTCTCCAGTATTTT+TGG | + | chr8_3:39414793-39414812 | None:intergenic | 45.0% |
TACGTTCTCAAACAAGGGAC+AGG | - | chr8_3:39414830-39414849 | Msa1287810:CDS | 45.0% | |
TACACCTCACCAAAGATACG+GGG | + | chr8_3:39415208-39415227 | None:intergenic | 45.0% | |
ATAAACTCGTCACAAAGGCG+CGG | + | chr8_3:39415673-39415692 | None:intergenic | 45.0% | |
GAGTATAGTGATCCTCGATC+TGG | - | chr8_3:39415712-39415731 | Msa1287810:intron | 45.0% | |
! | TCAGGCTTTATGACATGTGG+TGG | + | chr8_3:39415763-39415782 | None:intergenic | 45.0% |
AACGCATCCTTCCAATTGGG+AGG | - | chr8_3:39414605-39414624 | Msa1287810:intron | 50.0% | |
GACACTCGCCAGTTCTTTGA+AGG | - | chr8_3:39415556-39415575 | Msa1287810:intron | 50.0% | |
GGAACCAAAGAAGAGCTTGG+CGG | - | chr8_3:39415811-39415830 | Msa1287810:CDS | 50.0% | |
CCATTGTGATATGGCAGACG+CGG | - | chr8_3:39415855-39415874 | Msa1287810:CDS | 50.0% | |
AACGCATCCTTCCAATTGGG+AGG | - | chr8_3:39414605-39414624 | Msa1287810:intron | 50.0% | |
GACACTCGCCAGTTCTTTGA+AGG | - | chr8_3:39415556-39415575 | Msa1287810:intron | 50.0% | |
GGAACCAAAGAAGAGCTTGG+CGG | - | chr8_3:39415811-39415830 | Msa1287810:CDS | 50.0% | |
CCATTGTGATATGGCAGACG+CGG | - | chr8_3:39415855-39415874 | Msa1287810:CDS | 50.0% | |
TGGTTGTGGTGGCTGTGTGA+TGG | - | chr8_3:39414576-39414595 | Msa1287810:intron | 55.0% | |
TCCTCCCCGTATCTTTGGTG+AGG | - | chr8_3:39415201-39415220 | Msa1287810:intron | 55.0% | |
ACCTCACCAAAGATACGGGG+AGG | + | chr8_3:39415205-39415224 | None:intergenic | 55.0% | |
GTGGTGGCAACTTTGCAGCA+AGG | + | chr8_3:39415747-39415766 | None:intergenic | 55.0% | |
ACCAAAGAAGAGCTTGGCGG+AGG | - | chr8_3:39415814-39415833 | Msa1287810:CDS | 55.0% | |
TCCTCCGCCAAGCTCTTCTT+TGG | + | chr8_3:39415818-39415837 | None:intergenic | 55.0% | |
CCGCGTCTGCCATATCACAA+TGG | + | chr8_3:39415858-39415877 | None:intergenic | 55.0% | |
TGGTTGTGGTGGCTGTGTGA+TGG | - | chr8_3:39414576-39414595 | Msa1287810:intron | 55.0% | |
TCCTCCCCGTATCTTTGGTG+AGG | - | chr8_3:39415201-39415220 | Msa1287810:intron | 55.0% | |
ACCTCACCAAAGATACGGGG+AGG | + | chr8_3:39415205-39415224 | None:intergenic | 55.0% | |
GTGGTGGCAACTTTGCAGCA+AGG | + | chr8_3:39415747-39415766 | None:intergenic | 55.0% | |
ACCAAAGAAGAGCTTGGCGG+AGG | - | chr8_3:39415814-39415833 | Msa1287810:CDS | 55.0% | |
TCCTCCGCCAAGCTCTTCTT+TGG | + | chr8_3:39415818-39415837 | None:intergenic | 55.0% | |
CCGCGTCTGCCATATCACAA+TGG | + | chr8_3:39415858-39415877 | None:intergenic | 55.0% | |
GAGCTTGGCGGAGGAGATTC+TGG | - | chr8_3:39415823-39415842 | Msa1287810:CDS | 60.0% | |
GAGCTTGGCGGAGGAGATTC+TGG | - | chr8_3:39415823-39415842 | Msa1287810:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 39414514 | 39416011 | 39414514 | ID=Msa1287810;Name=Msa1287810 |
chr8_3 | mRNA | 39414514 | 39416011 | 39414514 | ID=Msa1287810-mRNA-1;Parent=Msa1287810;Name=Msa1287810-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|1|1|4|0|206 |
chr8_3 | exon | 39415768 | 39416011 | 39415768 | ID=Msa1287810-mRNA-1:exon:11019;Parent=Msa1287810-mRNA-1 |
chr8_3 | exon | 39415582 | 39415628 | 39415582 | ID=Msa1287810-mRNA-1:exon:11018;Parent=Msa1287810-mRNA-1 |
chr8_3 | exon | 39414649 | 39414957 | 39414649 | ID=Msa1287810-mRNA-1:exon:11017;Parent=Msa1287810-mRNA-1 |
chr8_3 | exon | 39414514 | 39414534 | 39414514 | ID=Msa1287810-mRNA-1:exon:11016;Parent=Msa1287810-mRNA-1 |
chr8_3 | CDS | 39415768 | 39416011 | 39415768 | ID=Msa1287810-mRNA-1:cds;Parent=Msa1287810-mRNA-1 |
chr8_3 | CDS | 39415582 | 39415628 | 39415582 | ID=Msa1287810-mRNA-1:cds;Parent=Msa1287810-mRNA-1 |
chr8_3 | CDS | 39414649 | 39414957 | 39414649 | ID=Msa1287810-mRNA-1:cds;Parent=Msa1287810-mRNA-1 |
chr8_3 | CDS | 39414514 | 39414534 | 39414514 | ID=Msa1287810-mRNA-1:cds;Parent=Msa1287810-mRNA-1 |
Gene Sequence |
Protein sequence |