Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300450 | sp|Q9SQI3|FATB_GOSHI | 74.279 | 416 | 96 | 6 | 1 | 411 | 1 | 410 | 0.0 | 620 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300450 | G7JU47 | 98.792 | 414 | 5 | 0 | 1 | 414 | 1 | 414 | 0.0 | 849 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa1300450 | 0.809207 | 2.120415e-50 | -8.615850e-47 |
| Msa0041690 | Msa1300450 | 0.800593 | 1.340288e-48 | -8.615850e-47 |
| Msa0116790 | Msa1300450 | 0.830446 | 2.924163e-55 | -8.615850e-47 |
| Msa0119320 | Msa1300450 | 0.810166 | 1.319507e-50 | -8.615850e-47 |
| Msa0669180 | Msa1300450 | 0.805342 | 1.398104e-49 | -8.615850e-47 |
| Msa0689760 | Msa1300450 | 0.810405 | 1.171640e-50 | -8.615850e-47 |
| Msa0716860 | Msa1300450 | 0.814307 | 1.646907e-51 | -8.615850e-47 |
| Msa0837410 | Msa1300450 | 0.829365 | 5.362100e-55 | -8.615850e-47 |
| Msa0141400 | Msa1300450 | 0.801355 | 9.364853e-49 | -8.615850e-47 |
| Msa0174260 | Msa1300450 | 0.809452 | 1.879483e-50 | -8.615850e-47 |
| Msa1261070 | Msa1300450 | 0.847468 | 1.134359e-59 | -8.615850e-47 |
| Msa1300450 | Msa1416260 | 0.808438 | 3.097287e-50 | -8.615850e-47 |
| Msa1300450 | Msa1420250 | 0.807953 | 3.929082e-50 | -8.615850e-47 |
| Msa0434570 | Msa1300450 | 0.825102 | 5.629528e-54 | -8.615850e-47 |
| Msa0434770 | Msa1300450 | 0.818992 | 1.467264e-52 | -8.615850e-47 |
| Msa0478580 | Msa1300450 | 0.811043 | 8.529334e-51 | -8.615850e-47 |
| Msa1010460 | Msa1300450 | 0.806850 | 6.733822e-50 | -8.615850e-47 |
| Msa0244380 | Msa1300450 | 0.809651 | 1.703243e-50 | -8.615850e-47 |
| Msa0322900 | Msa1300450 | 0.808461 | 3.062980e-50 | -8.615850e-47 |
| Msa1213810 | Msa1300450 | 0.807563 | 4.756220e-50 | -8.615850e-47 |
| Msa1214320 | Msa1300450 | 0.860946 | 1.448687e-63 | -8.615850e-47 |
| Msa0597770 | Msa1300450 | 0.821651 | 3.605425e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300450 | MtrunA17_Chr4g0062811 | 98.792 | 414 | 5 | 0 | 1 | 414 | 1 | 414 | 0.0 | 849 |
| Msa1300450 | MtrunA17_Chr2g0306391 | 78.520 | 419 | 81 | 5 | 1 | 414 | 1 | 415 | 0.0 | 660 |
| Msa1300450 | MtrunA17_Chr3g0132041 | 53.025 | 281 | 124 | 4 | 126 | 398 | 103 | 383 | 2.23e-103 | 311 |
| Msa1300450 | MtrunA17_Chr7g0235761 | 46.179 | 301 | 140 | 6 | 119 | 398 | 67 | 366 | 4.01e-84 | 261 |
| Msa1300450 | MtrunA17_Chr1g0208941 | 43.631 | 314 | 118 | 4 | 119 | 398 | 75 | 363 | 3.46e-81 | 254 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300450 | AT1G08510.1 | 74.010 | 404 | 97 | 3 | 1 | 398 | 1 | 402 | 0.0 | 609 |
| Msa1300450 | AT3G25110.1 | 48.814 | 295 | 135 | 7 | 119 | 399 | 68 | 360 | 3.93e-90 | 277 |
| Msa1300450 | AT4G13050.1 | 46.667 | 300 | 134 | 7 | 121 | 398 | 69 | 364 | 1.90e-87 | 270 |
Find 173 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGACTTCTTCCGGAATTT+TGG | 0.170299 | 8_3:+61996571 | None:intergenic |
| ATTTAATTGTTTGATTAAAA+TGG | 0.175992 | 8_3:-61994826 | Msa1300450:three_prime_UTR |
| CCCTGTTACTTCATCCTTGC+CGG | 0.219883 | 8_3:-61998130 | Msa1300450:CDS |
| TCTATCAGATCGTATGAAAT+TGG | 0.224730 | 8_3:-61997739 | Msa1300450:CDS |
| CTGTCATCTTCTTCCAGAAT+TGG | 0.234599 | 8_3:+61996515 | None:intergenic |
| ACGTCCCACATGGGAATTAT+TGG | 0.238051 | 8_3:-61994649 | Msa1300450:three_prime_UTR |
| ACCAGAAAATAAATGAAATT+TGG | 0.239522 | 8_3:+61994879 | None:intergenic |
| TGTGGAATCTGCACCAATTC+TGG | 0.245449 | 8_3:-61996528 | Msa1300450:CDS |
| ATGATTCATTATTGTATCTA+TGG | 0.249215 | 8_3:+61997699 | None:intergenic |
| TATTATTATAACATGCTTAA+AGG | 0.258827 | 8_3:+61994608 | None:intergenic |
| CCACTTTGATATTGTGAATC+AGG | 0.261585 | 8_3:-61995131 | Msa1300450:CDS |
| AAGAAAATTGCATCTTTAGA+AGG | 0.262385 | 8_3:+61994767 | None:intergenic |
| CATGCCCCTCCCAAGATTAA+TGG | 0.282466 | 8_3:-61998012 | Msa1300450:CDS |
| ATCAAAGTGGTTCACAGGTT+TGG | 0.283485 | 8_3:+61995144 | None:intergenic |
| GTTAAAACTGCGGGGCTTCT+TGG | 0.293306 | 8_3:-61997514 | Msa1300450:CDS |
| GTGTTGCTTTGGTGCGTAAA+AGG | 0.296067 | 8_3:-61994963 | Msa1300450:three_prime_UTR |
| GACTCTGGTGGCAACAAAAT+TGG | 0.296666 | 8_3:-61998108 | Msa1300450:CDS |
| TCAAAGTGGTTCACAGGTTT+GGG | 0.298152 | 8_3:+61995145 | None:intergenic |
| AGGGAGTAGTGATTGATTAT+AGG | 0.298515 | 8_3:+61999533 | None:intergenic |
| GGAAATGAGATTATTTAAAC+AGG | 0.315443 | 8_3:+61999513 | None:intergenic |
| AACTTTGGTTCCATTAATCT+TGG | 0.321274 | 8_3:+61998002 | None:intergenic |
| CCTTCTAATTTGTGTTGCTT+TGG | 0.321827 | 8_3:-61994974 | Msa1300450:three_prime_UTR |
| TGGTATAGGCAAAATTGTTC+AGG | 0.344538 | 8_3:-61997788 | Msa1300450:CDS |
| ATCTCTCCTCTGACTTCTTC+CGG | 0.345295 | 8_3:+61996563 | None:intergenic |
| GAAGTACATTGGCTGGATTC+TGG | 0.345569 | 8_3:-61996291 | Msa1300450:CDS |
| GTCTGTGCTTTCAGCCTAGA+TGG | 0.356485 | 8_3:-61996349 | Msa1300450:intron |
| GGGCTTCTTGGTGATGGCTT+TGG | 0.357333 | 8_3:-61997502 | Msa1300450:CDS |
| GCTAATTACAATGAGATATA+TGG | 0.358437 | 8_3:+61994930 | None:intergenic |
| TACAATAATGAATCATTTGC+AGG | 0.359879 | 8_3:-61997692 | Msa1300450:intron |
| TCTCTTCCCTAAGGTTAAAC+TGG | 0.360517 | 8_3:-61995054 | Msa1300450:three_prime_UTR |
| GGGAGTAGTGATTGATTATA+GGG | 0.363420 | 8_3:+61999534 | None:intergenic |
| CAGAAAGCTGTCCAAAATTC+CGG | 0.364635 | 8_3:-61996582 | Msa1300450:CDS |
| CAGCATCAGATACAGAAGTT+AGG | 0.369505 | 8_3:+61995266 | None:intergenic |
| GAAACTTGGGTTTCTGCATC+AGG | 0.376424 | 8_3:-61997098 | Msa1300450:CDS |
| GTGCTATGACTTTGGAGTAT+AGG | 0.377990 | 8_3:-61995321 | Msa1300450:CDS |
| CATTTGCTTCGACTTGAAGA+TGG | 0.382701 | 8_3:-61995202 | Msa1300450:CDS |
| TGTTGCTTTGGTGCGTAAAA+GGG | 0.382744 | 8_3:-61994962 | Msa1300450:three_prime_UTR |
| GTTAGAACCAGTTTAACCTT+AGG | 0.383922 | 8_3:+61995047 | None:intergenic |
| TGAGCTTTGTGCTATGACTT+TGG | 0.385914 | 8_3:-61995329 | Msa1300450:CDS |
| TTTCGTGATCGACAGTGTTT+GGG | 0.391693 | 8_3:-61996624 | Msa1300450:intron |
| TCCGGCAAGGATGAAGTAAC+AGG | 0.392133 | 8_3:+61998129 | None:intergenic |
| GAAGAAGTCAGAGGAGAGAT+AGG | 0.399585 | 8_3:-61996560 | Msa1300450:CDS |
| CCAAAGCAACACAAATTAGA+AGG | 0.409398 | 8_3:+61994974 | None:intergenic |
| AAACCTTAGGTGCTTCCTGC+TGG | 0.412033 | 8_3:+61995106 | None:intergenic |
| GGTGGGAATGCGAACCTTGG+AGG | 0.413247 | 8_3:-61998084 | Msa1300450:CDS |
| GGAAGAAGATGACAGAAAAC+TGG | 0.423587 | 8_3:-61996507 | Msa1300450:CDS |
| TTCTACAGATGTAGAAACTT+TGG | 0.428061 | 8_3:+61997987 | None:intergenic |
| ATAATAACGTGTTCAGTTCA+AGG | 0.429745 | 8_3:-61994414 | Msa1300450:three_prime_UTR |
| ATTAATCTTGGGAGGGGCAT+GGG | 0.432092 | 8_3:+61998014 | None:intergenic |
| GACATGCTGATTGACCCTTT+TGG | 0.434816 | 8_3:-61997808 | Msa1300450:CDS |
| CGTCCCACATGGGAATTATT+GGG | 0.436232 | 8_3:-61994648 | Msa1300450:three_prime_UTR |
| TTTCTGGTTGCTATAGTGCT+AGG | 0.437871 | 8_3:-61994864 | Msa1300450:three_prime_UTR |
| GCATGCTCCAGTCAGGTAAC+TGG | 0.441878 | 8_3:+61997908 | None:intergenic |
| GGTTCCATTAATCTTGGGAG+GGG | 0.445528 | 8_3:+61998008 | None:intergenic |
| CATTAATCTTGGGAGGGGCA+TGG | 0.448502 | 8_3:+61998013 | None:intergenic |
| GCAAATGCTGGCACTCAATC+CGG | 0.451066 | 8_3:+61995218 | None:intergenic |
| ACTTCATCCTTGCCGGACTC+TGG | 0.452399 | 8_3:-61998123 | Msa1300450:CDS |
| CTTAATCATGTTAAAACTGC+GGG | 0.456249 | 8_3:-61997523 | Msa1300450:CDS |
| ACTTTGGTTCCATTAATCTT+GGG | 0.456944 | 8_3:+61998003 | None:intergenic |
| TGCCGTCGTCGCAATCCTCT+AGG | 0.464686 | 8_3:-61997942 | Msa1300450:CDS |
| CTAACTTCTGTATCTGATGC+TGG | 0.466418 | 8_3:-61995265 | Msa1300450:CDS |
| ATCGAGAATGAGAAGAAGGA+AGG | 0.473005 | 8_3:+61999408 | None:intergenic |
| ATTTGCTTCGACTTGAAGAT+GGG | 0.475110 | 8_3:-61995201 | Msa1300450:CDS |
| TATAACATGCTTAAAGGAGA+AGG | 0.476987 | 8_3:+61994614 | None:intergenic |
| ATATTATAAGACATGTAGAT+TGG | 0.477574 | 8_3:+61994998 | None:intergenic |
| GCAAGAAGCATGCTCCAGTC+AGG | 0.478605 | 8_3:+61997901 | None:intergenic |
| ACAATGTGAAGTACATTGGC+TGG | 0.478806 | 8_3:-61996298 | Msa1300450:CDS |
| GTTTCTGCATCAGGCAAGAA+TGG | 0.481956 | 8_3:-61997089 | Msa1300450:CDS |
| ATGTTGTTCATGTAGAAACT+TGG | 0.487017 | 8_3:-61997112 | Msa1300450:CDS |
| TGGTTGCTATAGTGCTAGGC+TGG | 0.490240 | 8_3:-61994860 | Msa1300450:three_prime_UTR |
| AGCATCAGATACAGAAGTTA+GGG | 0.491194 | 8_3:+61995267 | None:intergenic |
| GGTTGATGTTCTTTGCCGCT+TGG | 0.491363 | 8_3:-61994444 | Msa1300450:three_prime_UTR |
| GTATACAATCACAGTTGTAT+TGG | 0.492198 | 8_3:+61994692 | None:intergenic |
| ACAATATCAAAGTGGTTCAC+AGG | 0.493409 | 8_3:+61995139 | None:intergenic |
| TTAGAACCAGTTTAACCTTA+GGG | 0.493580 | 8_3:+61995048 | None:intergenic |
| AACAGTGGATGATGCTCGAT+TGG | 0.493658 | 8_3:-61997846 | Msa1300450:CDS |
| GCAGAGAGATAGAGTAGAGC+AGG | 0.497228 | 8_3:+61994906 | None:intergenic |
| ACTGCGGGGCTTCTTGGTGA+TGG | 0.497472 | 8_3:-61997508 | Msa1300450:CDS |
| AGAAAATTGCATCTTTAGAA+GGG | 0.502651 | 8_3:+61994768 | None:intergenic |
| AGAATGGTATGCGTCGTGAT+TGG | 0.502971 | 8_3:-61997073 | Msa1300450:CDS |
| ACATCTAGATCACTCCATCT+AGG | 0.503730 | 8_3:+61996335 | None:intergenic |
| GTTCCAGCAGGAAGCACCTA+AGG | 0.506583 | 8_3:-61995109 | Msa1300450:exon |
| TCGAGAATGAGAAGAAGGAA+GGG | 0.507050 | 8_3:+61999409 | None:intergenic |
| GTGGGAATGCGAACCTTGGA+GGG | 0.511900 | 8_3:-61998083 | Msa1300450:CDS |
| TGCCATGTCTAGGATATATG+TGG | 0.513209 | 8_3:-61994569 | Msa1300450:three_prime_UTR |
| GTCCTAGAGGATTGCGACGA+CGG | 0.514658 | 8_3:+61997940 | None:intergenic |
| AGAAATCGAGAATGAGAAGA+AGG | 0.515121 | 8_3:+61999404 | None:intergenic |
| GTGAAATCAGAGGAAGAAGA+AGG | 0.517956 | 8_3:+61999435 | None:intergenic |
| ATCAGAGGAAGAAGAAGGAA+AGG | 0.518581 | 8_3:+61999440 | None:intergenic |
| GTAATCTAGCTCAAAGCGGC+CGG | 0.520723 | 8_3:-61995237 | Msa1300450:CDS |
| CTTTCTTCTCTTCTTCACTC+TGG | 0.520960 | 8_3:-61999367 | Msa1300450:intron |
| TTATCAACCAGTTACCTGAC+TGG | 0.521390 | 8_3:-61997915 | Msa1300450:CDS |
| AAATCTAAACATGCGTCTGC+GGG | 0.521491 | 8_3:-61998057 | Msa1300450:CDS |
| CTATGACTTTGGAGTATAGG+AGG | 0.523086 | 8_3:-61995318 | Msa1300450:CDS |
| CATGAACCATTCAAAACCTT+AGG | 0.524151 | 8_3:+61995093 | None:intergenic |
| TTTGTCTCATCTAAAGTGAA+GGG | 0.529235 | 8_3:-61994381 | Msa1300450:three_prime_UTR |
| ATTGTTTGATTAAAATGGCT+AGG | 0.529717 | 8_3:-61994821 | Msa1300450:three_prime_UTR |
| CTTCAAGTCGAAGCAAATGC+TGG | 0.533924 | 8_3:+61995206 | None:intergenic |
| TGGTTCCATTAATCTTGGGA+GGG | 0.538281 | 8_3:+61998007 | None:intergenic |
| ATTTGTCTCATCTAAAGTGA+AGG | 0.539866 | 8_3:-61994382 | Msa1300450:three_prime_UTR |
| TGTTGTTCATGTAGAAACTT+GGG | 0.541342 | 8_3:-61997111 | Msa1300450:CDS |
| ACAGCGGATTATATCCGCTC+GGG | 0.549430 | 8_3:-61996467 | Msa1300450:CDS |
| TTGGTTCCATTAATCTTGGG+AGG | 0.550365 | 8_3:+61998006 | None:intergenic |
| GTCTGCGGGCTTGCAAGTAA+AGG | 0.550821 | 8_3:-61998043 | Msa1300450:CDS |
| GGAAGGGAAGGTGAAATCAG+AGG | 0.552484 | 8_3:+61999425 | None:intergenic |
| CAGATACAGAAGTTAGGGAC+TGG | 0.555844 | 8_3:+61995272 | None:intergenic |
| TAAATCTAAACATGCGTCTG+CGG | 0.556057 | 8_3:-61998058 | Msa1300450:CDS |
| GCCATGTCTAGGATATATGT+GGG | 0.557762 | 8_3:-61994568 | Msa1300450:three_prime_UTR |
| ATAACATGCTTAAAGGAGAA+GGG | 0.557867 | 8_3:+61994615 | None:intergenic |
| GGTGGCAACAAAATTGGTGG+TGG | 0.558849 | 8_3:-61998102 | Msa1300450:CDS |
| TTGTGAGGGGTAGAACTAAG+TGG | 0.561099 | 8_3:-61995171 | Msa1300450:CDS |
| TCATATCAGTCTCTTCCCTA+AGG | 0.564216 | 8_3:-61995063 | Msa1300450:three_prime_UTR |
| AAATCTTGACGAGAGCCTCC+AGG | 0.565088 | 8_3:-61997025 | Msa1300450:intron |
| GAATGAGAAGAAGGAAGGGA+AGG | 0.566032 | 8_3:+61999413 | None:intergenic |
| TGCTCGATTGGAAGCCAAGA+CGG | 0.569855 | 8_3:-61997834 | Msa1300450:CDS |
| TCTGTATCTGATGCTGGTGT+TGG | 0.570023 | 8_3:-61995259 | Msa1300450:CDS |
| GTTGCTTTGGTGCGTAAAAG+GGG | 0.571711 | 8_3:-61994961 | Msa1300450:three_prime_UTR |
| TGAAATTGGTGCGGATCGAA+CGG | 0.573921 | 8_3:-61997725 | Msa1300450:CDS |
| GGTGGTGGGAATGCGAACCT+TGG | 0.574054 | 8_3:-61998087 | Msa1300450:CDS |
| ATCAGCATGTCAGACCGTCT+TGG | 0.574490 | 8_3:+61997820 | None:intergenic |
| ATGTATACAAACGTCCCACA+TGG | 0.576326 | 8_3:-61994659 | Msa1300450:three_prime_UTR |
| AGACACGATAGCACATGTAA+AGG | 0.578428 | 8_3:+61994543 | None:intergenic |
| CACAGCGGATTATATCCGCT+CGG | 0.579496 | 8_3:-61996468 | Msa1300450:CDS |
| CATAGGTACCAAGCAAAATG+TGG | 0.584997 | 8_3:+61994517 | None:intergenic |
| GTTTAGATTTAAGCCCTCCA+AGG | 0.590994 | 8_3:+61998070 | None:intergenic |
| TCATCCTTGCCGGACTCTGG+TGG | 0.592944 | 8_3:-61998120 | Msa1300450:CDS |
| ATTGTGAATCAGGTTCCAGC+AGG | 0.595303 | 8_3:-61995121 | Msa1300450:CDS |
| TCAGAGGAAGAAGAAGGAAA+GGG | 0.596772 | 8_3:+61999441 | None:intergenic |
| AAAATAGAATCTCATTATGG+TGG | 0.602507 | 8_3:-61998172 | Msa1300450:exon |
| ACGTTTGTATACATACAAGC+TGG | 0.609142 | 8_3:+61994668 | None:intergenic |
| GAAATGAGATTATTTAAACA+GGG | 0.614388 | 8_3:+61999514 | None:intergenic |
| TCTGGTGGCAACAAAATTGG+TGG | 0.617307 | 8_3:-61998105 | Msa1300450:CDS |
| TGCTTTGGTGCGTAAAAGGG+GGG | 0.617854 | 8_3:-61994959 | Msa1300450:three_prime_UTR |
| GTTAACAATGTGAAGTACAT+TGG | 0.619008 | 8_3:-61996302 | Msa1300450:CDS |
| CCCCACATATATCCTAGACA+TGG | 0.620563 | 8_3:+61994567 | None:intergenic |
| AGATGGGGCTGAAATTGTGA+GGG | 0.620618 | 8_3:-61995185 | Msa1300450:CDS |
| TTGTCTCATCTAAAGTGAAG+GGG | 0.621484 | 8_3:-61994380 | Msa1300450:three_prime_UTR |
| GTATAGGAGGGAGTGTGGCA+AGG | 0.625777 | 8_3:-61995305 | Msa1300450:CDS |
| CTGGTTGATAAAAGTCCTAG+AGG | 0.628361 | 8_3:+61997927 | None:intergenic |
| TTTGCTTCGACTTGAAGATG+GGG | 0.629398 | 8_3:-61995200 | Msa1300450:CDS |
| TTGGAGTATAGGAGGGAGTG+TGG | 0.631407 | 8_3:-61995310 | Msa1300450:CDS |
| CCTGATTCACAATATCAAAG+TGG | 0.634270 | 8_3:+61995131 | None:intergenic |
| CACAAAGCTCATGACTCTCG+AGG | 0.634653 | 8_3:+61995341 | None:intergenic |
| TGTAGAAAACTATAAGCATG+AGG | 0.636729 | 8_3:-61997971 | Msa1300450:CDS |
| TTTACGTGATTATAATACTG+GGG | 0.636769 | 8_3:-61997048 | Msa1300450:CDS |
| AAGATGGGGCTGAAATTGTG+AGG | 0.638157 | 8_3:-61995186 | Msa1300450:CDS |
| GTTGCCACCAGAGTCCGGCA+AGG | 0.642093 | 8_3:+61998116 | None:intergenic |
| TGCACCCAATAATTCCCATG+TGG | 0.645028 | 8_3:+61994644 | None:intergenic |
| GTGGCAACAAAATTGGTGGT+GGG | 0.645115 | 8_3:-61998101 | Msa1300450:CDS |
| ACACAAGCAAAACTCTTCAG+AGG | 0.647990 | 8_3:+61995025 | None:intergenic |
| ATAGGCAAAATTGTTCAGGA+TGG | 0.648420 | 8_3:-61997784 | Msa1300450:CDS |
| TTGCTTTGGTGCGTAAAAGG+GGG | 0.650036 | 8_3:-61994960 | Msa1300450:three_prime_UTR |
| TTGTTGATCGTTATCCTACG+TGG | 0.650683 | 8_3:-61997420 | Msa1300450:intron |
| GCACCCAATAATTCCCATGT+GGG | 0.652186 | 8_3:+61994645 | None:intergenic |
| CCATGTCTAGGATATATGTG+GGG | 0.652456 | 8_3:-61994567 | Msa1300450:three_prime_UTR |
| TGTATACAAACGTCCCACAT+GGG | 0.658845 | 8_3:-61994658 | Msa1300450:three_prime_UTR |
| ACTTAATATGGGTAGTTGCG+CGG | 0.660135 | 8_3:-61997453 | Msa1300450:CDS |
| CATGTCTAGGATATATGTGG+GGG | 0.663903 | 8_3:-61994566 | Msa1300450:three_prime_UTR |
| GTACATTGGCTGGATTCTGG+AGG | 0.665676 | 8_3:-61996288 | Msa1300450:intron |
| GTTATTATGCATGTACCAAG+CGG | 0.668404 | 8_3:+61994429 | None:intergenic |
| TATGACTTTGGAGTATAGGA+GGG | 0.670410 | 8_3:-61995317 | Msa1300450:CDS |
| ACTTAATCATGTTAAAACTG+CGG | 0.670918 | 8_3:-61997524 | Msa1300450:CDS |
| CCGGCAAGGATGAAGTAACA+GGG | 0.676128 | 8_3:+61998130 | None:intergenic |
| AAAATTCCGGAAGAAGTCAG+AGG | 0.678251 | 8_3:-61996569 | Msa1300450:CDS |
| TTAATCATGTTAAAACTGCG+GGG | 0.691366 | 8_3:-61997522 | Msa1300450:CDS |
| GATGGGGCTGAAATTGTGAG+GGG | 0.696909 | 8_3:-61995184 | Msa1300450:CDS |
| TGACTCTCGAGGATTGACTG+TGG | 0.701079 | 8_3:+61995352 | None:intergenic |
| TGAGGGGTAGAACTAAGTGG+AGG | 0.718786 | 8_3:-61995168 | Msa1300450:CDS |
| CAGATCGTATGAAATTGGTG+CGG | 0.718974 | 8_3:-61997734 | Msa1300450:CDS |
| GACATACACTTAAACCCGAG+CGG | 0.720447 | 8_3:+61996453 | None:intergenic |
| GTTGGTAATCTAGCTCAAAG+CGG | 0.743042 | 8_3:-61995241 | Msa1300450:CDS |
| GTATGGATGACTTACCACGT+AGG | 0.760670 | 8_3:+61997406 | None:intergenic |
| TAAACTTGATGACAGCACAG+CGG | 0.795237 | 8_3:-61996483 | Msa1300450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAATGAATCTTTATTTA+TGG | - | chr8_3:61996287-61996306 | Msa1300450:intron | 10.0% |
| !! | ATTTAATTGTTTGATTAAAA+TGG | - | chr8_3:61999128-61999147 | Msa1300450:intron | 10.0% |
| !! | AAATTCTAGATAATCTAAAA+TGG | + | chr8_3:61995067-61995086 | None:intergenic | 15.0% |
| !!! | TTTTTATTAGTATTGGAATT+AGG | - | chr8_3:61995298-61995317 | Msa1300450:CDS | 15.0% |
| !! | TAAAAAATAGAATCTCATTA+TGG | - | chr8_3:61995779-61995798 | Msa1300450:intron | 15.0% |
| !!! | TTATTCTACAGATTTTAATA+TGG | + | chr8_3:61997203-61997222 | None:intergenic | 15.0% |
| !! | AAATTAAATAAAATTCTCGA+TGG | - | chr8_3:61997777-61997796 | Msa1300450:CDS | 15.0% |
| !! | TACTAACATTATATTGTTTA+GGG | - | chr8_3:61998015-61998034 | Msa1300450:CDS | 15.0% |
| !! | AATATGTGACTAATTAATTA+GGG | + | chr8_3:61998474-61998493 | None:intergenic | 15.0% |
| !!! | ATATTATTATTCTTTTCTCT+TGG | - | chr8_3:61999163-61999182 | Msa1300450:intron | 15.0% |
| !! | TATTATTATAACATGCTTAA+AGG | + | chr8_3:61999349-61999368 | None:intergenic | 15.0% |
| !! | GAAATGAGATTATTTAAACA+GGG | + | chr8_3:61994443-61994462 | None:intergenic | 20.0% |
| !!! | TCTCTTCTTTTTTTAATTTG+TGG | + | chr8_3:61994465-61994484 | None:intergenic | 20.0% |
| !!! | ATTGTGTAATTTTAGATCAT+AGG | + | chr8_3:61994491-61994510 | None:intergenic | 20.0% |
| !!! | TTAATTTTGAAATTATCGAG+AGG | - | chr8_3:61994777-61994796 | Msa1300450:three_prime_UTR | 20.0% |
| !!! | TTTTTACTTTTCTTGTTTTG+CGG | - | chr8_3:61994910-61994929 | Msa1300450:three_prime_UTR | 20.0% |
| !!! | AGTTGTTATTTGTTTACTTT+TGG | - | chr8_3:61994963-61994982 | Msa1300450:three_prime_UTR | 20.0% |
| !! | ATGATTCATTATTGTATCTA+TGG | + | chr8_3:61996258-61996277 | None:intergenic | 20.0% |
| !!! | ACAATTATTTGTTTGATAAC+AGG | - | chr8_3:61996400-61996419 | Msa1300450:intron | 20.0% |
| !!! | TAGTTGTTTTGATCTTTATA+AGG | - | chr8_3:61996631-61996650 | Msa1300450:intron | 20.0% |
| !!! | TCAAGTATCTATATTTTTTC+AGG | - | chr8_3:61996815-61996834 | Msa1300450:intron | 20.0% |
| !!! | CAAGTATCTATATTTTTTCA+GGG | - | chr8_3:61996816-61996835 | Msa1300450:intron | 20.0% |
| !!! | AAGTATCTATATTTTTTCAG+GGG | - | chr8_3:61996817-61996836 | Msa1300450:intron | 20.0% |
| !!! | TTTTACGTGATTATAATACT+GGG | - | chr8_3:61996905-61996924 | Msa1300450:intron | 20.0% |
| !! | AGAGAAAAGACAAAAATAAT+TGG | + | chr8_3:61997723-61997742 | None:intergenic | 20.0% |
| !! | GTACTAACATTATATTGTTT+AGG | - | chr8_3:61998014-61998033 | Msa1300450:CDS | 20.0% |
| !! | AAATGAAACATGATATAACT+TGG | - | chr8_3:61998344-61998363 | Msa1300450:intron | 20.0% |
| !! | ATATGTGACTAATTAATTAG+GGG | + | chr8_3:61998473-61998492 | None:intergenic | 20.0% |
| !! | CAATATGTGACTAATTAATT+AGG | + | chr8_3:61998475-61998494 | None:intergenic | 20.0% |
| !! | ATATTATAAGACATGTAGAT+TGG | + | chr8_3:61998959-61998978 | None:intergenic | 20.0% |
| !!! | TCCAAATTTCATTTATTTTC+TGG | - | chr8_3:61999074-61999093 | Msa1300450:intron | 20.0% |
| !! | ACCAGAAAATAAATGAAATT+TGG | + | chr8_3:61999078-61999097 | None:intergenic | 20.0% |
| !! | TTTGTTGGACTTAAAAAAAA+AGG | - | chr8_3:61999482-61999501 | Msa1300450:five_prime_UTR | 20.0% |
| !! | GACTTAAAAAAAAAGGTTTA+AGG | - | chr8_3:61999489-61999508 | Msa1300450:five_prime_UTR | 20.0% |
| ! | GGAAATGAGATTATTTAAAC+AGG | + | chr8_3:61994444-61994463 | None:intergenic | 25.0% |
| !! | TAAATTTGAAAAGCACGTTA+AGG | + | chr8_3:61994650-61994669 | None:intergenic | 25.0% |
| ! | GATGAAAAATGCAGAAAAAA+CGG | + | chr8_3:61994720-61994739 | None:intergenic | 25.0% |
| ! | GCAAAACAAGAAAAGTAAAA+AGG | + | chr8_3:61994911-61994930 | None:intergenic | 25.0% |
| !! | AGTGATAGTGAAAAAAACAA+AGG | + | chr8_3:61995102-61995121 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTTTCACTATCAC+TGG | - | chr8_3:61995101-61995120 | Msa1300450:exon | 25.0% |
| !!! | TTGTTTTTTTCACTATCACT+GGG | - | chr8_3:61995102-61995121 | Msa1300450:exon | 25.0% |
| ! | CAGAAGTTGCAAATATTATA+TGG | - | chr8_3:61995248-61995267 | Msa1300450:CDS | 25.0% |
| !! | TGAGAGAAAAGGTATAATAA+AGG | + | chr8_3:61995328-61995347 | None:intergenic | 25.0% |
| !! | TTATACCTTTTCTCTCATTT+AGG | - | chr8_3:61995331-61995350 | Msa1300450:CDS | 25.0% |
| ! | TACAAAGAGAAACATAAGTT+TGG | + | chr8_3:61995628-61995647 | None:intergenic | 25.0% |
| !!! | ATGTTGCTATTGTTTGTTAT+TGG | - | chr8_3:61995671-61995690 | Msa1300450:intron | 25.0% |
| !!! | TGTTGCTATTGTTTGTTATT+GGG | - | chr8_3:61995672-61995691 | Msa1300450:intron | 25.0% |
| ! | AAAATAGAATCTCATTATGG+TGG | - | chr8_3:61995782-61995801 | Msa1300450:intron | 25.0% |
| ! | TACAATAATGAATCATTTGC+AGG | - | chr8_3:61996262-61996281 | Msa1300450:intron | 25.0% |
| !! | GAATCTTTATTTATGGTCTT+AGG | - | chr8_3:61996294-61996313 | Msa1300450:CDS | 25.0% |
| ! | TATACATATAAGCTTGTATG+AGG | + | chr8_3:61996378-61996397 | None:intergenic | 25.0% |
| ! | ACTTAATCATGTTAAAACTG+CGG | - | chr8_3:61996430-61996449 | Msa1300450:intron | 25.0% |
| ! | TGTGCAAAAAGAACTTAATA+TGG | - | chr8_3:61996489-61996508 | Msa1300450:CDS | 25.0% |
| ! | GTGCAAAAAGAACTTAATAT+GGG | - | chr8_3:61996490-61996509 | Msa1300450:CDS | 25.0% |
| !!! | GTTTTGATCTTTATAAGGAA+TGG | - | chr8_3:61996636-61996655 | Msa1300450:intron | 25.0% |
| ! | AAGTTAGATAATCTGTTATG+TGG | - | chr8_3:61996755-61996774 | Msa1300450:intron | 25.0% |
| !! | CTTTTACGTGATTATAATAC+TGG | - | chr8_3:61996904-61996923 | Msa1300450:intron | 25.0% |
| ! | TTTACGTGATTATAATACTG+GGG | - | chr8_3:61996906-61996925 | Msa1300450:intron | 25.0% |
| ! | TTTCAAAACAAGTTTATTGC+TGG | + | chr8_3:61996998-61997017 | None:intergenic | 25.0% |
| !!! | AGCAATAAACTTGTTTTGAA+AGG | - | chr8_3:61996997-61997016 | Msa1300450:intron | 25.0% |
| !!! | CATCTATCATTTTTTGATCT+TGG | - | chr8_3:61997300-61997319 | Msa1300450:intron | 25.0% |
| ! | ATACCAATAACAACAAAGAA+TGG | + | chr8_3:61997526-61997545 | None:intergenic | 25.0% |
| ! | ACACAGTATGTAATCTAATT+AGG | + | chr8_3:61997587-61997606 | None:intergenic | 25.0% |
| !!! | ATCATAATTTGACTAGCTTA+AGG | - | chr8_3:61997814-61997833 | Msa1300450:CDS | 25.0% |
| ! | TAACATTATATTGTTTAGGG+TGG | - | chr8_3:61998018-61998037 | Msa1300450:CDS | 25.0% |
| !! | AACATTATATTGTTTAGGGT+GGG | - | chr8_3:61998019-61998038 | Msa1300450:CDS | 25.0% |
| ! | GCTGATGAAAATTATTGATA+TGG | - | chr8_3:61997943-61997962 | Msa1300450:CDS | 25.0% |
| ! | TTAGAAAAGAACTTTATCGT+AGG | + | chr8_3:61998108-61998127 | None:intergenic | 25.0% |
| !!! | ATCTTAGACTTTGAGATATA+AGG | + | chr8_3:61998234-61998253 | None:intergenic | 25.0% |
| !!! | AAGTATTTTATTTGCCATAG+TGG | - | chr8_3:61998255-61998274 | Msa1300450:intron | 25.0% |
| ! | TTACAGAAAGTTAAACAACA+CGG | - | chr8_3:61998411-61998430 | Msa1300450:intron | 25.0% |
| ! | TATGTGACTAATTAATTAGG+GGG | + | chr8_3:61998472-61998491 | None:intergenic | 25.0% |
| !!! | TTAGTCACATATTGATTTCT+TGG | - | chr8_3:61998481-61998500 | Msa1300450:intron | 25.0% |
| !!! | TTGTTTAGTTTGTTATGTGA+TGG | - | chr8_3:61998521-61998540 | Msa1300450:intron | 25.0% |
| !!! | TGTTTAGTTTGTTATGTGAT+GGG | - | chr8_3:61998522-61998541 | Msa1300450:intron | 25.0% |
| ! | GCTAATTACAATGAGATATA+TGG | + | chr8_3:61999027-61999046 | None:intergenic | 25.0% |
| ! | ATTGTTTGATTAAAATGGCT+AGG | - | chr8_3:61999133-61999152 | Msa1300450:intron | 25.0% |
| !! | AGAAAATTGCATCTTTAGAA+GGG | + | chr8_3:61999189-61999208 | None:intergenic | 25.0% |
| ! | AAGAAAATTGCATCTTTAGA+AGG | + | chr8_3:61999190-61999209 | None:intergenic | 25.0% |
| !!! | ATTTTGAAATTATCGAGAGG+TGG | - | chr8_3:61994780-61994799 | Msa1300450:three_prime_UTR | 30.0% |
| TCCAAAGGAAAATTGTAGAA+CGG | + | chr8_3:61995024-61995043 | None:intergenic | 30.0% | |
| ! | GATACGTTTTTACTCAAAGT+GGG | + | chr8_3:61995134-61995153 | None:intergenic | 30.0% |
| ! | TGATACGTTTTTACTCAAAG+TGG | + | chr8_3:61995135-61995154 | None:intergenic | 30.0% |
| !! | TTTGTTCTCCTTTGAAATTG+AGG | - | chr8_3:61995203-61995222 | Msa1300450:CDS | 30.0% |
| TTAAGCTACTTATCCAAACA+AGG | + | chr8_3:61995357-61995376 | None:intergenic | 30.0% | |
| !!! | CTGTTTTTATGAGCTAATCT+TGG | - | chr8_3:61995487-61995506 | Msa1300450:intron | 30.0% |
| GGGTGAAATATGATTATGTA+TGG | - | chr8_3:61995692-61995711 | Msa1300450:intron | 30.0% | |
| !!! | GGCGTTGATACATTTTTTTT+AGG | - | chr8_3:61995713-61995732 | Msa1300450:intron | 30.0% |
| ! | ACTTTGGTTCCATTAATCTT+GGG | + | chr8_3:61995954-61995973 | None:intergenic | 30.0% |
| ! | AACTTTGGTTCCATTAATCT+TGG | + | chr8_3:61995955-61995974 | None:intergenic | 30.0% |
| TTCTACAGATGTAGAAACTT+TGG | + | chr8_3:61995970-61995989 | None:intergenic | 30.0% | |
| TGTAGAAAACTATAAGCATG+AGG | - | chr8_3:61995983-61996002 | Msa1300450:intron | 30.0% | |
| ! | TGCTATAACAACGATTTTCT+TGG | - | chr8_3:61996076-61996095 | Msa1300450:intron | 30.0% |
| ! | CAATTTTGCCTATACCAAAA+GGG | + | chr8_3:61996163-61996182 | None:intergenic | 30.0% |
| ! | ACAATTTTGCCTATACCAAA+AGG | + | chr8_3:61996164-61996183 | None:intergenic | 30.0% |
| TCTATCAGATCGTATGAAAT+TGG | - | chr8_3:61996215-61996234 | Msa1300450:intron | 30.0% | |
| ! | TAGGAGATAAAAAGTTGGTT+AGG | - | chr8_3:61996313-61996332 | Msa1300450:CDS | 30.0% |
| CTTAATCATGTTAAAACTGC+GGG | - | chr8_3:61996431-61996450 | Msa1300450:intron | 30.0% | |
| TTAATCATGTTAAAACTGCG+GGG | - | chr8_3:61996432-61996451 | Msa1300450:intron | 30.0% | |
| ! | AAGTTCTTTTTGCACATTTC+AGG | + | chr8_3:61996485-61996504 | None:intergenic | 30.0% |
| AACTGCTAAATAAATGCAGA+AGG | + | chr8_3:61996693-61996712 | None:intergenic | 30.0% | |
| ATGTTGTTCATGTAGAAACT+TGG | - | chr8_3:61996842-61996861 | Msa1300450:intron | 30.0% | |
| TGTTGTTCATGTAGAAACTT+GGG | - | chr8_3:61996843-61996862 | Msa1300450:intron | 30.0% | |
| TTCATTACTAAGTATAAGCC+CGG | - | chr8_3:61997238-61997257 | Msa1300450:intron | 30.0% | |
| !!! | CTATCATTTTTTGATCTTGG+TGG | - | chr8_3:61997303-61997322 | Msa1300450:intron | 30.0% |
| !!! | AGAGATAGGTTCTTATTTTG+TGG | - | chr8_3:61997408-61997427 | Msa1300450:intron | 30.0% |
| !! | TGTCCATTCTTTGTTGTTAT+TGG | - | chr8_3:61997520-61997539 | Msa1300450:CDS | 30.0% |
| TAATTAGGAAACAGCATCTA+GGG | + | chr8_3:61997572-61997591 | None:intergenic | 30.0% | |
| GTTAACAATGTGAAGTACAT+TGG | - | chr8_3:61997652-61997671 | Msa1300450:intron | 30.0% | |
| !!! | GACTAAAGACTAGGTTTTTT+TGG | + | chr8_3:61997880-61997899 | None:intergenic | 30.0% |
| ! | ATCAATAATTTTCATCAGCC+TGG | + | chr8_3:61997942-61997961 | None:intergenic | 30.0% |
| AGTTTCATTAGTGTTGTGTT+CGG | - | chr8_3:61998140-61998159 | Msa1300450:CDS | 30.0% | |
| !! | TAGACTTTGAGATATAAGGT+GGG | + | chr8_3:61998230-61998249 | None:intergenic | 30.0% |
| !! | TTAGACTTTGAGATATAAGG+TGG | + | chr8_3:61998231-61998250 | None:intergenic | 30.0% |
| TGAAACATGATATAACTTGG+TGG | - | chr8_3:61998347-61998366 | Msa1300450:intron | 30.0% | |
| TTAGAACCAGTTTAACCTTA+GGG | + | chr8_3:61998909-61998928 | None:intergenic | 30.0% | |
| GTATACAATCACAGTTGTAT+TGG | + | chr8_3:61999265-61999284 | None:intergenic | 30.0% | |
| ATAACATGCTTAAAGGAGAA+GGG | + | chr8_3:61999342-61999361 | None:intergenic | 30.0% | |
| TATAACATGCTTAAAGGAGA+AGG | + | chr8_3:61999343-61999362 | None:intergenic | 30.0% | |
| ! | TATCTTTTAATGCCATGTCT+AGG | - | chr8_3:61999375-61999394 | Msa1300450:five_prime_UTR | 30.0% |
| ATAATAACGTGTTCAGTTCA+AGG | - | chr8_3:61999540-61999559 | Msa1300450:five_prime_UTR | 30.0% | |
| ! | ATTTGTCTCATCTAAAGTGA+AGG | - | chr8_3:61999572-61999591 | Msa1300450:five_prime_UTR | 30.0% |
| ! | TTTGTCTCATCTAAAGTGAA+GGG | - | chr8_3:61999573-61999592 | Msa1300450:five_prime_UTR | 30.0% |
| GGGAGTAGTGATTGATTATA+GGG | + | chr8_3:61994423-61994442 | None:intergenic | 35.0% | |
| AGGGAGTAGTGATTGATTAT+AGG | + | chr8_3:61994424-61994443 | None:intergenic | 35.0% | |
| AGAAATCGAGAATGAGAAGA+AGG | + | chr8_3:61994553-61994572 | None:intergenic | 35.0% | |
| ! | TTTGCGGTGTTTTCTAGATT+CGG | - | chr8_3:61994926-61994945 | Msa1300450:three_prime_UTR | 35.0% |
| ! | TCCGTTCTACAATTTTCCTT+TGG | - | chr8_3:61995020-61995039 | Msa1300450:three_prime_UTR | 35.0% |
| ! | TCATTTTCTCACGTTTCCAA+AGG | + | chr8_3:61995039-61995058 | None:intergenic | 35.0% |
| CTAGTGAACCTCAATTTCAA+AGG | + | chr8_3:61995214-61995233 | None:intergenic | 35.0% | |
| !! | GTAGCTTAATTTGCAGCTTA+TGG | - | chr8_3:61995368-61995387 | Msa1300450:intron | 35.0% |
| !!! | TATTTTTTACAGCAGCTGCA+TGG | + | chr8_3:61995768-61995787 | None:intergenic | 35.0% |
| TAAATCTAAACATGCGTCTG+CGG | - | chr8_3:61995896-61995915 | Msa1300450:intron | 35.0% | |
| TGGTATAGGCAAAATTGTTC+AGG | - | chr8_3:61996166-61996185 | Msa1300450:intron | 35.0% | |
| ATAGGCAAAATTGTTCAGGA+TGG | - | chr8_3:61996170-61996189 | Msa1300450:intron | 35.0% | |
| GGTCTTAGGAGATAAAAAGT+TGG | - | chr8_3:61996308-61996327 | Msa1300450:CDS | 35.0% | |
| CATACAACAAGTGATGAGTA+TGG | + | chr8_3:61996568-61996587 | None:intergenic | 35.0% | |
| CAAAACAACTAGCAGAGAAA+TGG | + | chr8_3:61996622-61996641 | None:intergenic | 35.0% | |
| ! | TGTACCTTGTTTATCAGAGT+TGG | - | chr8_3:61996715-61996734 | Msa1300450:intron | 35.0% |
| ! | ACGACTTCATAAAAGTGTGT+AGG | + | chr8_3:61997064-61997083 | None:intergenic | 35.0% |
| AACGTGTGATTTATATGCAC+CGG | + | chr8_3:61997260-61997279 | None:intergenic | 35.0% | |
| !!! | TCATTTTTTGATCTTGGTGG+TGG | - | chr8_3:61997306-61997325 | Msa1300450:intron | 35.0% |
| CTAATTAGGAAACAGCATCT+AGG | + | chr8_3:61997573-61997592 | None:intergenic | 35.0% | |
| TCAAGATATTTGTCCGTGAA+AGG | + | chr8_3:61997748-61997767 | None:intergenic | 35.0% | |
| !!! | AAGACTAGGTTTTTTTGGTG+AGG | + | chr8_3:61997875-61997894 | None:intergenic | 35.0% |
| ! | AAACCTAGTCTTTAGTCTGT+TGG | - | chr8_3:61997883-61997902 | Msa1300450:CDS | 35.0% |
| ! | AACCTAGTCTTTAGTCTGTT+GGG | - | chr8_3:61997884-61997903 | Msa1300450:CDS | 35.0% |
| GTCTTTAGTCTGCAAAGTAA+GGG | - | chr8_3:61997906-61997925 | Msa1300450:CDS | 35.0% | |
| ! | TGGTAATGATACTAGAGAGA+GGG | + | chr8_3:61998052-61998071 | None:intergenic | 35.0% |
| TCAAATGTCAATGACCACTA+TGG | + | chr8_3:61998272-61998291 | None:intergenic | 35.0% | |
| ! | ATCTGGGATTCTTAACCAAA+GGG | - | chr8_3:61998553-61998572 | Msa1300450:intron | 35.0% |
| AAAATCAAAACACAGCCCTT+TGG | + | chr8_3:61998571-61998590 | None:intergenic | 35.0% | |
| !! | TATGACTTTGGAGTATAGGA+GGG | - | chr8_3:61998637-61998656 | Msa1300450:intron | 35.0% |
| AGCATCAGATACAGAAGTTA+GGG | + | chr8_3:61998690-61998709 | None:intergenic | 35.0% | |
| ! | ATTTGCTTCGACTTGAAGAT+GGG | - | chr8_3:61998753-61998772 | Msa1300450:intron | 35.0% |
| ACAATATCAAAGTGGTTCAC+AGG | + | chr8_3:61998818-61998837 | None:intergenic | 35.0% | |
| CCTGATTCACAATATCAAAG+TGG | + | chr8_3:61998826-61998845 | None:intergenic | 35.0% | |
| CCACTTTGATATTGTGAATC+AGG | - | chr8_3:61998823-61998842 | Msa1300450:intron | 35.0% | |
| CATGAACCATTCAAAACCTT+AGG | + | chr8_3:61998864-61998883 | None:intergenic | 35.0% | |
| !!! | CTAAGGTTTTGAATGGTTCA+TGG | - | chr8_3:61998862-61998881 | Msa1300450:intron | 35.0% |
| GTTAGAACCAGTTTAACCTT+AGG | + | chr8_3:61998910-61998929 | None:intergenic | 35.0% | |
| CCAAAGCAACACAAATTAGA+AGG | + | chr8_3:61998983-61999002 | None:intergenic | 35.0% | |
| !! | CCTTCTAATTTGTGTTGCTT+TGG | - | chr8_3:61998980-61998999 | Msa1300450:intron | 35.0% |
| ACGTTTGTATACATACAAGC+TGG | + | chr8_3:61999289-61999308 | None:intergenic | 35.0% | |
| GTTATTATGCATGTACCAAG+CGG | + | chr8_3:61999528-61999547 | None:intergenic | 35.0% | |
| ! | TTGTCTCATCTAAAGTGAAG+GGG | - | chr8_3:61999574-61999593 | Msa1300450:five_prime_UTR | 35.0% |
| TCAGAGGAAGAAGAAGGAAA+GGG | + | chr8_3:61994516-61994535 | None:intergenic | 40.0% | |
| ATCAGAGGAAGAAGAAGGAA+AGG | + | chr8_3:61994517-61994536 | None:intergenic | 40.0% | |
| GTGAAATCAGAGGAAGAAGA+AGG | + | chr8_3:61994522-61994541 | None:intergenic | 40.0% | |
| TCGAGAATGAGAAGAAGGAA+GGG | + | chr8_3:61994548-61994567 | None:intergenic | 40.0% | |
| ATCGAGAATGAGAAGAAGGA+AGG | + | chr8_3:61994549-61994568 | None:intergenic | 40.0% | |
| CTTTCTTCTCTTCTTCACTC+TGG | - | chr8_3:61994587-61994606 | Msa1300450:three_prime_UTR | 40.0% | |
| TAAGGTGAAGTGTAGATCAG+AGG | + | chr8_3:61994632-61994651 | None:intergenic | 40.0% | |
| CAAGGCCTAAATGAGAGAAA+AGG | + | chr8_3:61995339-61995358 | None:intergenic | 40.0% | |
| !! | TCTCTCATTTAGGCCTTGTT+TGG | - | chr8_3:61995341-61995360 | Msa1300450:CDS | 40.0% |
| GAGCGCTAACAATACTGTTT+AGG | + | chr8_3:61995575-61995594 | None:intergenic | 40.0% | |
| AGTAACAGGGAAAAAAGCAG+CGG | + | chr8_3:61995814-61995833 | None:intergenic | 40.0% | |
| GTTTAGATTTAAGCCCTCCA+AGG | + | chr8_3:61995887-61995906 | None:intergenic | 40.0% | |
| AAATCTAAACATGCGTCTGC+GGG | - | chr8_3:61995897-61995916 | Msa1300450:intron | 40.0% | |
| TGGTTCCATTAATCTTGGGA+GGG | + | chr8_3:61995950-61995969 | None:intergenic | 40.0% | |
| TTGGTTCCATTAATCTTGGG+AGG | + | chr8_3:61995951-61995970 | None:intergenic | 40.0% | |
| !! | CTGGTTGATAAAAGTCCTAG+AGG | + | chr8_3:61996030-61996049 | None:intergenic | 40.0% |
| TTATCAACCAGTTACCTGAC+TGG | - | chr8_3:61996039-61996058 | Msa1300450:intron | 40.0% | |
| ! | CTGATTGACCCTTTTGGTAT+AGG | - | chr8_3:61996152-61996171 | Msa1300450:intron | 40.0% |
| CAGATCGTATGAAATTGGTG+CGG | - | chr8_3:61996220-61996239 | Msa1300450:intron | 40.0% | |
| TCGTTGTGCAGAATAGATAG+TGG | - | chr8_3:61996349-61996368 | Msa1300450:intron | 40.0% | |
| ACTTAATATGGGTAGTTGCG+CGG | - | chr8_3:61996501-61996520 | Msa1300450:CDS | 40.0% | |
| TTGTTGATCGTTATCCTACG+TGG | - | chr8_3:61996534-61996553 | Msa1300450:CDS | 40.0% | |
| GAAGCCAACTCTGATAAACA+AGG | + | chr8_3:61996722-61996741 | None:intergenic | 40.0% | |
| ! | GTTTATCAGAGTTGGCTTCT+TGG | - | chr8_3:61996723-61996742 | Msa1300450:intron | 40.0% |
| AGAGAATGATTTCTACCTGG+AGG | + | chr8_3:61996947-61996966 | None:intergenic | 40.0% | |
| TCCAGGTAGAAATCATTCTC+TGG | - | chr8_3:61996946-61996965 | Msa1300450:intron | 40.0% | |
| TCCAGAGAATGATTTCTACC+TGG | + | chr8_3:61996950-61996969 | None:intergenic | 40.0% | |
| ! | AGTTTATTGCTGGCTGCAAA+AGG | + | chr8_3:61996988-61997007 | None:intergenic | 40.0% |
| ACGTGTGATTTATATGCACC+GGG | + | chr8_3:61997259-61997278 | None:intergenic | 40.0% | |
| ! | TTTTCGTGATCGACAGTGTT+TGG | - | chr8_3:61997329-61997348 | Msa1300450:intron | 40.0% |
| TTTCGTGATCGACAGTGTTT+GGG | - | chr8_3:61997330-61997349 | Msa1300450:intron | 40.0% | |
| CAGAAAGCTGTCCAAAATTC+CGG | - | chr8_3:61997372-61997391 | Msa1300450:intron | 40.0% | |
| ! | TCTGACTTCTTCCGGAATTT+TGG | + | chr8_3:61997386-61997405 | None:intergenic | 40.0% |
| AAAATTCCGGAAGAAGTCAG+AGG | - | chr8_3:61997385-61997404 | Msa1300450:intron | 40.0% | |
| CTGTCATCTTCTTCCAGAAT+TGG | + | chr8_3:61997442-61997461 | None:intergenic | 40.0% | |
| GGAAGAAGATGACAGAAAAC+TGG | - | chr8_3:61997447-61997466 | Msa1300450:CDS | 40.0% | |
| ! | TAAACTTGATGACAGCACAG+CGG | - | chr8_3:61997471-61997490 | Msa1300450:CDS | 40.0% |
| ACATCTAGATCACTCCATCT+AGG | + | chr8_3:61997622-61997641 | None:intergenic | 40.0% | |
| ACAATGTGAAGTACATTGGC+TGG | - | chr8_3:61997656-61997675 | Msa1300450:intron | 40.0% | |
| ! | GTCTTTTCTCTCTCCTTTCA+CGG | - | chr8_3:61997732-61997751 | Msa1300450:CDS | 40.0% |
| !!! | GACTAGCTTAAGGTCTTTTG+CGG | - | chr8_3:61997824-61997843 | Msa1300450:CDS | 40.0% |
| !! | ACTAGCTTAAGGTCTTTTGC+GGG | - | chr8_3:61997825-61997844 | Msa1300450:CDS | 40.0% |
| GGTCTTTAGTCTGCAAAGTA+AGG | - | chr8_3:61997905-61997924 | Msa1300450:CDS | 40.0% | |
| ! | CTGGTAATGATACTAGAGAG+AGG | + | chr8_3:61998053-61998072 | None:intergenic | 40.0% |
| CTCTCTCTAGTATCATTACC+AGG | - | chr8_3:61998051-61998070 | Msa1300450:CDS | 40.0% | |
| ATTGACATTTGATGCCTCAC+AGG | - | chr8_3:61998280-61998299 | Msa1300450:intron | 40.0% | |
| ! | CATCTGGGATTCTTAACCAA+AGG | - | chr8_3:61998552-61998571 | Msa1300450:intron | 40.0% |
| ! | TGAGCTTTGTGCTATGACTT+TGG | - | chr8_3:61998625-61998644 | Msa1300450:intron | 40.0% |
| !! | GTGCTATGACTTTGGAGTAT+AGG | - | chr8_3:61998633-61998652 | Msa1300450:intron | 40.0% |
| !! | CTATGACTTTGGAGTATAGG+AGG | - | chr8_3:61998636-61998655 | Msa1300450:intron | 40.0% |
| CAGCATCAGATACAGAAGTT+AGG | + | chr8_3:61998691-61998710 | None:intergenic | 40.0% | |
| CTAACTTCTGTATCTGATGC+TGG | - | chr8_3:61998689-61998708 | Msa1300450:intron | 40.0% | |
| !! | GTTGGTAATCTAGCTCAAAG+CGG | - | chr8_3:61998713-61998732 | Msa1300450:intron | 40.0% |
| ! | CATTTGCTTCGACTTGAAGA+TGG | - | chr8_3:61998752-61998771 | Msa1300450:intron | 40.0% |
| ! | TTTGCTTCGACTTGAAGATG+GGG | - | chr8_3:61998754-61998773 | Msa1300450:intron | 40.0% |
| TCAAAGTGGTTCACAGGTTT+GGG | + | chr8_3:61998812-61998831 | None:intergenic | 40.0% | |
| ATCAAAGTGGTTCACAGGTT+TGG | + | chr8_3:61998813-61998832 | None:intergenic | 40.0% | |
| !!! | GAAGCACCTAAGGTTTTGAA+TGG | - | chr8_3:61998855-61998874 | Msa1300450:intron | 40.0% |
| !!! | GGTTTTGAATGGTTCATGGT+TGG | - | chr8_3:61998866-61998885 | Msa1300450:intron | 40.0% |
| TCATATCAGTCTCTTCCCTA+AGG | - | chr8_3:61998891-61998910 | Msa1300450:intron | 40.0% | |
| TCTCTTCCCTAAGGTTAAAC+TGG | - | chr8_3:61998900-61998919 | Msa1300450:intron | 40.0% | |
| ACACAAGCAAAACTCTTCAG+AGG | + | chr8_3:61998932-61998951 | None:intergenic | 40.0% | |
| !! | TGTTGCTTTGGTGCGTAAAA+GGG | - | chr8_3:61998992-61999011 | Msa1300450:intron | 40.0% |
| !! | TTTCTGGTTGCTATAGTGCT+AGG | - | chr8_3:61999090-61999109 | Msa1300450:intron | 40.0% |
| ATGTATACAAACGTCCCACA+TGG | - | chr8_3:61999295-61999314 | Msa1300450:intron | 40.0% | |
| TGTATACAAACGTCCCACAT+GGG | - | chr8_3:61999296-61999315 | Msa1300450:intron | 40.0% | |
| ! | TGCCATGTCTAGGATATATG+TGG | - | chr8_3:61999385-61999404 | Msa1300450:five_prime_UTR | 40.0% |
| ! | GCCATGTCTAGGATATATGT+GGG | - | chr8_3:61999386-61999405 | Msa1300450:five_prime_UTR | 40.0% |
| ! | CCATGTCTAGGATATATGTG+GGG | - | chr8_3:61999387-61999406 | Msa1300450:five_prime_UTR | 40.0% |
| ! | CATGTCTAGGATATATGTGG+GGG | - | chr8_3:61999388-61999407 | Msa1300450:five_prime_UTR | 40.0% |
| AGACACGATAGCACATGTAA+AGG | + | chr8_3:61999414-61999433 | None:intergenic | 40.0% | |
| ! | TGTCTAGTCCACATTTTGCT+TGG | - | chr8_3:61999429-61999448 | Msa1300450:five_prime_UTR | 40.0% |
| CATAGGTACCAAGCAAAATG+TGG | + | chr8_3:61999440-61999459 | None:intergenic | 40.0% | |
| ! | TCGTCATTCGTGTCTTTTGT+TGG | - | chr8_3:61999467-61999486 | Msa1300450:five_prime_UTR | 40.0% |
| GAATGAGAAGAAGGAAGGGA+AGG | + | chr8_3:61994544-61994563 | None:intergenic | 45.0% | |
| CAACGAACACGATGCATCAT+TGG | + | chr8_3:61994817-61994836 | None:intergenic | 45.0% | |
| GCTGCATGGTAAATTGAAGC+AGG | + | chr8_3:61995754-61995773 | None:intergenic | 45.0% | |
| ! | ATTTTGTTGCCACCAGAGTC+CGG | + | chr8_3:61995846-61995865 | None:intergenic | 45.0% |
| GACTCTGGTGGCAACAAAAT+TGG | - | chr8_3:61995846-61995865 | Msa1300450:intron | 45.0% | |
| TCTGGTGGCAACAAAATTGG+TGG | - | chr8_3:61995849-61995868 | Msa1300450:intron | 45.0% | |
| ! | GTGGCAACAAAATTGGTGGT+GGG | - | chr8_3:61995853-61995872 | Msa1300450:intron | 45.0% |
| ! | ATTAATCTTGGGAGGGGCAT+GGG | + | chr8_3:61995943-61995962 | None:intergenic | 45.0% |
| GGTTCCATTAATCTTGGGAG+GGG | + | chr8_3:61995949-61995968 | None:intergenic | 45.0% | |
| TCTTGGCAGCTGAAAAACAG+TGG | - | chr8_3:61996093-61996112 | Msa1300450:intron | 45.0% | |
| AACAGTGGATGATGCTCGAT+TGG | - | chr8_3:61996108-61996127 | Msa1300450:intron | 45.0% | |
| !! | GACATGCTGATTGACCCTTT+TGG | - | chr8_3:61996146-61996165 | Msa1300450:intron | 45.0% |
| TGAAATTGGTGCGGATCGAA+CGG | - | chr8_3:61996229-61996248 | Msa1300450:intron | 45.0% | |
| GTATGGATGACTTACCACGT+AGG | + | chr8_3:61996551-61996570 | None:intergenic | 45.0% | |
| GAAACTTGGGTTTCTGCATC+AGG | - | chr8_3:61996856-61996875 | Msa1300450:intron | 45.0% | |
| GTTTCTGCATCAGGCAAGAA+TGG | - | chr8_3:61996865-61996884 | Msa1300450:intron | 45.0% | |
| AGAATGGTATGCGTCGTGAT+TGG | - | chr8_3:61996881-61996900 | Msa1300450:intron | 45.0% | |
| ! | CGGAATTTTGGACAGCTTTC+TGG | + | chr8_3:61997374-61997393 | None:intergenic | 45.0% |
| ATCTCTCCTCTGACTTCTTC+CGG | + | chr8_3:61997394-61997413 | None:intergenic | 45.0% | |
| GAAGAAGTCAGAGGAGAGAT+AGG | - | chr8_3:61997394-61997413 | Msa1300450:intron | 45.0% | |
| TGTGGAATCTGCACCAATTC+TGG | - | chr8_3:61997426-61997445 | Msa1300450:CDS | 45.0% | |
| GACATACACTTAAACCCGAG+CGG | + | chr8_3:61997504-61997523 | None:intergenic | 45.0% | |
| ! | GAAGTACATTGGCTGGATTC+TGG | - | chr8_3:61997663-61997682 | Msa1300450:intron | 45.0% |
| GACCCAACAGACTAAAGACT+AGG | + | chr8_3:61997889-61997908 | None:intergenic | 45.0% | |
| ! | AGTAAGGGTGTGCTCTTATG+AGG | - | chr8_3:61997921-61997940 | Msa1300450:CDS | 45.0% |
| CATTAGTGTTGTGTTCGGAG+TGG | - | chr8_3:61998145-61998164 | Msa1300450:CDS | 45.0% | |
| AGTGAAGGAGCGAAATGACA+AGG | + | chr8_3:61998187-61998206 | None:intergenic | 45.0% | |
| CTCACAAGTCAATACCTGTG+AGG | + | chr8_3:61998297-61998316 | None:intergenic | 45.0% | |
| !! | TATTGACTTGTGAGCAAGCG+AGG | - | chr8_3:61998303-61998322 | Msa1300450:intron | 45.0% |
| !! | ATTGACTTGTGAGCAAGCGA+GGG | - | chr8_3:61998304-61998323 | Msa1300450:intron | 45.0% |
| !! | TGTGATGGGTTGATCACATC+TGG | - | chr8_3:61998536-61998555 | Msa1300450:intron | 45.0% |
| !! | GTGATGGGTTGATCACATCT+GGG | - | chr8_3:61998537-61998556 | Msa1300450:intron | 45.0% |
| CAGATACAGAAGTTAGGGAC+TGG | + | chr8_3:61998685-61998704 | None:intergenic | 45.0% | |
| TCTGTATCTGATGCTGGTGT+TGG | - | chr8_3:61998695-61998714 | Msa1300450:intron | 45.0% | |
| CTTCAAGTCGAAGCAAATGC+TGG | + | chr8_3:61998751-61998770 | None:intergenic | 45.0% | |
| AAGATGGGGCTGAAATTGTG+AGG | - | chr8_3:61998768-61998787 | Msa1300450:intron | 45.0% | |
| AGATGGGGCTGAAATTGTGA+GGG | - | chr8_3:61998769-61998788 | Msa1300450:intron | 45.0% | |
| TTGTGAGGGGTAGAACTAAG+TGG | - | chr8_3:61998783-61998802 | Msa1300450:intron | 45.0% | |
| ATTGTGAATCAGGTTCCAGC+AGG | - | chr8_3:61998833-61998852 | Msa1300450:intron | 45.0% | |
| !! | GTGTTGCTTTGGTGCGTAAA+AGG | - | chr8_3:61998991-61999010 | Msa1300450:intron | 45.0% |
| ! | GTTGCTTTGGTGCGTAAAAG+GGG | - | chr8_3:61998993-61999012 | Msa1300450:intron | 45.0% |
| ! | TTGCTTTGGTGCGTAAAAGG+GGG | - | chr8_3:61998994-61999013 | Msa1300450:intron | 45.0% |
| ACGTCCCACATGGGAATTAT+TGG | - | chr8_3:61999305-61999324 | Msa1300450:intron | 45.0% | |
| CGTCCCACATGGGAATTATT+GGG | - | chr8_3:61999306-61999325 | Msa1300450:intron | 45.0% | |
| GCACCCAATAATTCCCATGT+GGG | + | chr8_3:61999312-61999331 | None:intergenic | 45.0% | |
| TGCACCCAATAATTCCCATG+TGG | + | chr8_3:61999313-61999332 | None:intergenic | 45.0% | |
| CCCCACATATATCCTAGACA+TGG | + | chr8_3:61999390-61999409 | None:intergenic | 45.0% | |
| CGAATGACGAGCACAATCAT+AGG | + | chr8_3:61999457-61999476 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTATTAGTAT+TGG | - | chr8_3:61995291-61995310 | Msa1300450:CDS | 5.0% |
| GGAAGGGAAGGTGAAATCAG+AGG | + | chr8_3:61994532-61994551 | None:intergenic | 50.0% | |
| TTGCGAGCTTCGATCTCTGA+AGG | + | chr8_3:61994677-61994696 | None:intergenic | 50.0% | |
| CCGGCAAGGATGAAGTAACA+GGG | + | chr8_3:61995827-61995846 | None:intergenic | 50.0% | |
| ! | CCCTGTTACTTCATCCTTGC+CGG | - | chr8_3:61995824-61995843 | Msa1300450:intron | 50.0% |
| TCCGGCAAGGATGAAGTAAC+AGG | + | chr8_3:61995828-61995847 | None:intergenic | 50.0% | |
| GGTGGCAACAAAATTGGTGG+TGG | - | chr8_3:61995852-61995871 | Msa1300450:intron | 50.0% | |
| CATTAATCTTGGGAGGGGCA+TGG | + | chr8_3:61995944-61995963 | None:intergenic | 50.0% | |
| CATGCCCCTCCCAAGATTAA+TGG | - | chr8_3:61995942-61995961 | Msa1300450:intron | 50.0% | |
| TGCTCGATTGGAAGCCAAGA+CGG | - | chr8_3:61996120-61996139 | Msa1300450:intron | 50.0% | |
| ATCAGCATGTCAGACCGTCT+TGG | + | chr8_3:61996137-61996156 | None:intergenic | 50.0% | |
| GTTAAAACTGCGGGGCTTCT+TGG | - | chr8_3:61996440-61996459 | Msa1300450:intron | 50.0% | |
| AAATCTTGACGAGAGCCTCC+AGG | - | chr8_3:61996929-61996948 | Msa1300450:intron | 50.0% | |
| ! | TTGCTGGCTGCAAAAGGAAG+AGG | + | chr8_3:61996982-61997001 | None:intergenic | 50.0% |
| !! | CACAGCGGATTATATCCGCT+CGG | - | chr8_3:61997486-61997505 | Msa1300450:CDS | 50.0% |
| !! | ACAGCGGATTATATCCGCTC+GGG | - | chr8_3:61997487-61997506 | Msa1300450:CDS | 50.0% |
| GTCTGTGCTTTCAGCCTAGA+TGG | - | chr8_3:61997605-61997624 | Msa1300450:intron | 50.0% | |
| ! | GTACATTGGCTGGATTCTGG+AGG | - | chr8_3:61997666-61997685 | Msa1300450:intron | 50.0% |
| GAGCGAAATGACAAGGAGAG+AGG | + | chr8_3:61998180-61998199 | None:intergenic | 50.0% | |
| TAAGGTGGGCCTCATTGTTG+AGG | + | chr8_3:61998216-61998235 | None:intergenic | 50.0% | |
| TGACTCTCGAGGATTGACTG+TGG | + | chr8_3:61998605-61998624 | None:intergenic | 50.0% | |
| CACAAAGCTCATGACTCTCG+AGG | + | chr8_3:61998616-61998635 | None:intergenic | 50.0% | |
| TTGGAGTATAGGAGGGAGTG+TGG | - | chr8_3:61998644-61998663 | Msa1300450:intron | 50.0% | |
| ! | GTAATCTAGCTCAAAGCGGC+CGG | - | chr8_3:61998717-61998736 | Msa1300450:intron | 50.0% |
| GCAAATGCTGGCACTCAATC+CGG | + | chr8_3:61998739-61998758 | None:intergenic | 50.0% | |
| GATGGGGCTGAAATTGTGAG+GGG | - | chr8_3:61998770-61998789 | Msa1300450:intron | 50.0% | |
| TGAGGGGTAGAACTAAGTGG+AGG | - | chr8_3:61998786-61998805 | Msa1300450:intron | 50.0% | |
| AAACCTTAGGTGCTTCCTGC+TGG | + | chr8_3:61998851-61998870 | None:intergenic | 50.0% | |
| ! | TGCTTTGGTGCGTAAAAGGG+GGG | - | chr8_3:61998995-61999014 | Msa1300450:intron | 50.0% |
| GCAGAGAGATAGAGTAGAGC+AGG | + | chr8_3:61999051-61999070 | None:intergenic | 50.0% | |
| TGGTTGCTATAGTGCTAGGC+TGG | - | chr8_3:61999094-61999113 | Msa1300450:intron | 50.0% | |
| ! | GGTTGATGTTCTTTGCCGCT+TGG | - | chr8_3:61999510-61999529 | Msa1300450:five_prime_UTR | 50.0% |
| AGGGAAAAAAGCAGCGGCAG+TGG | + | chr8_3:61995808-61995827 | None:intergenic | 55.0% | |
| ACTTCATCCTTGCCGGACTC+TGG | - | chr8_3:61995831-61995850 | Msa1300450:intron | 55.0% | |
| GTGGGAATGCGAACCTTGGA+GGG | - | chr8_3:61995871-61995890 | Msa1300450:intron | 55.0% | |
| GTCTGCGGGCTTGCAAGTAA+AGG | - | chr8_3:61995911-61995930 | Msa1300450:intron | 55.0% | |
| GTCCTAGAGGATTGCGACGA+CGG | + | chr8_3:61996017-61996036 | None:intergenic | 55.0% | |
| GCATGCTCCAGTCAGGTAAC+TGG | + | chr8_3:61996049-61996068 | None:intergenic | 55.0% | |
| ! | GCAAGAAGCATGCTCCAGTC+AGG | + | chr8_3:61996056-61996075 | None:intergenic | 55.0% |
| !! | GGGCTTCTTGGTGATGGCTT+TGG | - | chr8_3:61996452-61996471 | Msa1300450:intron | 55.0% |
| TTGTTGAGGTGGGGGAGTGA+AGG | + | chr8_3:61998202-61998221 | None:intergenic | 55.0% | |
| ACTCCCCCACCTCAACAATG+AGG | - | chr8_3:61998204-61998223 | Msa1300450:intron | 55.0% | |
| TGGGCCTCATTGTTGAGGTG+GGG | + | chr8_3:61998211-61998230 | None:intergenic | 55.0% | |
| GTGGGCCTCATTGTTGAGGT+GGG | + | chr8_3:61998212-61998231 | None:intergenic | 55.0% | |
| ! | GTATAGGAGGGAGTGTGGCA+AGG | - | chr8_3:61998649-61998668 | Msa1300450:intron | 55.0% |
| !! | GTTCCAGCAGGAAGCACCTA+AGG | - | chr8_3:61998845-61998864 | Msa1300450:intron | 55.0% |
| TCATCCTTGCCGGACTCTGG+TGG | - | chr8_3:61995834-61995853 | Msa1300450:intron | 60.0% | |
| !! | GGTGGTGGGAATGCGAACCT+TGG | - | chr8_3:61995867-61995886 | Msa1300450:intron | 60.0% |
| GGTGGGAATGCGAACCTTGG+AGG | - | chr8_3:61995870-61995889 | Msa1300450:intron | 60.0% | |
| TGCCGTCGTCGCAATCCTCT+AGG | - | chr8_3:61996012-61996031 | Msa1300450:intron | 60.0% | |
| ACTGCGGGGCTTCTTGGTGA+TGG | - | chr8_3:61996446-61996465 | Msa1300450:intron | 60.0% | |
| GGGCCTCATTGTTGAGGTGG+GGG | + | chr8_3:61998210-61998229 | None:intergenic | 60.0% | |
| GGTGGGCCTCATTGTTGAGG+TGG | + | chr8_3:61998213-61998232 | None:intergenic | 60.0% | |
| GTTGCCACCAGAGTCCGGCA+AGG | + | chr8_3:61995841-61995860 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 61994378 | 61999598 | 61994378 | ID=Msa1300450;Name=Msa1300450 |
| chr8_3 | mRNA | 61994378 | 61999598 | 61994378 | ID=Msa1300450-mRNA-1;Parent=Msa1300450;Name=Msa1300450-mRNA-1;_AED=0.09;_eAED=0.09;_QI=256|1|1|1|0.71|0.5|8|706|414 |
| chr8_3 | exon | 61994378 | 61994492 | 61994378 | ID=Msa1300450-mRNA-1:exon:18434;Parent=Msa1300450-mRNA-1 |
| chr8_3 | exon | 61994520 | 61995380 | 61994520 | ID=Msa1300450-mRNA-1:exon:18433;Parent=Msa1300450-mRNA-1 |
| chr8_3 | exon | 61996289 | 61996357 | 61996289 | ID=Msa1300450-mRNA-1:exon:18432;Parent=Msa1300450-mRNA-1 |
| chr8_3 | exon | 61996460 | 61996631 | 61996460 | ID=Msa1300450-mRNA-1:exon:18431;Parent=Msa1300450-mRNA-1 |
| chr8_3 | exon | 61997026 | 61997139 | 61997026 | ID=Msa1300450-mRNA-1:exon:18430;Parent=Msa1300450-mRNA-1 |
| chr8_3 | exon | 61997421 | 61997554 | 61997421 | ID=Msa1300450-mRNA-1:exon:18429;Parent=Msa1300450-mRNA-1 |
| chr8_3 | exon | 61997693 | 61998203 | 61997693 | ID=Msa1300450-mRNA-1:exon:18428;Parent=Msa1300450-mRNA-1 |
| chr8_3 | exon | 61999368 | 61999598 | 61999368 | ID=Msa1300450-mRNA-1:exon:18427;Parent=Msa1300450-mRNA-1 |
| chr8_3 | five_prime_UTR | 61999368 | 61999598 | 61999368 | ID=Msa1300450-mRNA-1:five_prime_utr;Parent=Msa1300450-mRNA-1 |
| chr8_3 | five_prime_UTR | 61998179 | 61998203 | 61998179 | ID=Msa1300450-mRNA-1:five_prime_utr;Parent=Msa1300450-mRNA-1 |
| chr8_3 | CDS | 61997693 | 61998178 | 61997693 | ID=Msa1300450-mRNA-1:cds;Parent=Msa1300450-mRNA-1 |
| chr8_3 | CDS | 61997421 | 61997554 | 61997421 | ID=Msa1300450-mRNA-1:cds;Parent=Msa1300450-mRNA-1 |
| chr8_3 | CDS | 61997026 | 61997139 | 61997026 | ID=Msa1300450-mRNA-1:cds;Parent=Msa1300450-mRNA-1 |
| chr8_3 | CDS | 61996460 | 61996631 | 61996460 | ID=Msa1300450-mRNA-1:cds;Parent=Msa1300450-mRNA-1 |
| chr8_3 | CDS | 61996289 | 61996357 | 61996289 | ID=Msa1300450-mRNA-1:cds;Parent=Msa1300450-mRNA-1 |
| chr8_3 | CDS | 61995111 | 61995380 | 61995111 | ID=Msa1300450-mRNA-1:cds;Parent=Msa1300450-mRNA-1 |
| chr8_3 | three_prime_UTR | 61994520 | 61995110 | 61994520 | ID=Msa1300450-mRNA-1:three_prime_utr;Parent=Msa1300450-mRNA-1 |
| chr8_3 | three_prime_UTR | 61994378 | 61994492 | 61994378 | ID=Msa1300450-mRNA-1:three_prime_utr;Parent=Msa1300450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
