Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244380 | XP_003594970.1 | 98.750 | 320 | 2 | 1 | 1 | 320 | 1 | 318 | 0.0 | 653 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244380 | sp|Q40784|AAPC_CENCI | 78.618 | 304 | 65 | 0 | 16 | 319 | 26 | 329 | 0.0 | 516 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244380 | G7IN18 | 98.750 | 320 | 2 | 1 | 1 | 320 | 1 | 318 | 0.0 | 653 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002680 | Msa0244380 | 0.818843 | 1.585934e-52 | -8.615850e-47 |
Msa0003220 | Msa0244380 | 0.833978 | 3.907916e-56 | -8.615850e-47 |
Msa0004540 | Msa0244380 | 0.809424 | 1.905605e-50 | -8.615850e-47 |
Msa0005000 | Msa0244380 | -0.823359 | 1.445532e-53 | -8.615850e-47 |
Msa0012220 | Msa0244380 | 0.800787 | 1.223429e-48 | -8.615850e-47 |
Msa0027390 | Msa0244380 | 0.830312 | 3.152356e-55 | -8.615850e-47 |
Msa0033880 | Msa0244380 | 0.821915 | 3.131551e-53 | -8.615850e-47 |
Msa0039250 | Msa0244380 | 0.803759 | 2.990471e-49 | -8.615850e-47 |
Msa0041690 | Msa0244380 | 0.826449 | 2.695928e-54 | -8.615850e-47 |
Msa0047250 | Msa0244380 | 0.814993 | 1.160603e-51 | -8.615850e-47 |
Msa0047640 | Msa0244380 | 0.806419 | 8.302274e-50 | -8.615850e-47 |
Msa0052870 | Msa0244380 | 0.804533 | 2.063692e-49 | -8.615850e-47 |
Msa0053050 | Msa0244380 | -0.818129 | 2.302265e-52 | -8.615850e-47 |
Msa0069600 | Msa0244380 | 0.806945 | 6.427212e-50 | -8.615850e-47 |
Msa0070430 | Msa0244380 | 0.802654 | 5.063773e-49 | -8.615850e-47 |
Msa0074750 | Msa0244380 | 0.820405 | 6.978838e-53 | -8.615850e-47 |
Msa0077540 | Msa0244380 | 0.820309 | 7.340620e-53 | -8.615850e-47 |
Msa0081650 | Msa0244380 | 0.805667 | 1.195058e-49 | -8.615850e-47 |
Msa0085370 | Msa0244380 | 0.804740 | 1.868372e-49 | -8.615850e-47 |
Msa0090660 | Msa0244380 | 0.808946 | 2.411588e-50 | -8.615850e-47 |
Msa0096580 | Msa0244380 | 0.821621 | 3.663860e-53 | -8.615850e-47 |
Msa0098390 | Msa0244380 | -0.822352 | 2.479841e-53 | -8.615850e-47 |
Msa0115090 | Msa0244380 | 0.803252 | 3.808577e-49 | -8.615850e-47 |
Msa0116790 | Msa0244380 | 0.846379 | 2.253942e-59 | -8.615850e-47 |
Msa0119320 | Msa0244380 | 0.819641 | 1.044066e-52 | -8.615850e-47 |
Msa0126230 | Msa0244380 | 0.804662 | 1.940063e-49 | -8.615850e-47 |
Msa0127040 | Msa0244380 | 0.807157 | 5.797538e-50 | -8.615850e-47 |
Msa0127850 | Msa0244380 | 0.826973 | 2.021355e-54 | -8.615850e-47 |
Msa0130240 | Msa0244380 | 0.803760 | 2.988442e-49 | -8.615850e-47 |
Msa0133720 | Msa0244380 | 0.804602 | 1.996979e-49 | -8.615850e-47 |
Msa0133820 | Msa0244380 | 0.817741 | 2.817635e-52 | -8.615850e-47 |
Msa0138360 | Msa0244380 | 0.825595 | 4.301740e-54 | -8.615850e-47 |
Msa0141400 | Msa0244380 | 0.803604 | 3.220281e-49 | -8.615850e-47 |
Msa0144360 | Msa0244380 | 0.812201 | 4.775694e-51 | -8.615850e-47 |
Msa0144780 | Msa0244380 | 0.808369 | 3.204483e-50 | -8.615850e-47 |
Msa0147980 | Msa0244380 | 0.836905 | 7.112850e-57 | -8.615850e-47 |
Msa0165300 | Msa0244380 | 0.832991 | 6.891329e-56 | -8.615850e-47 |
Msa0174000 | Msa0244380 | 0.835127 | 2.010569e-56 | -8.615850e-47 |
Msa0181230 | Msa0244380 | 0.808002 | 3.836054e-50 | -8.615850e-47 |
Msa0208000 | Msa0244380 | 0.807268 | 5.491708e-50 | -8.615850e-47 |
Msa0225670 | Msa0244380 | 0.812434 | 4.247807e-51 | -8.615850e-47 |
Msa0236770 | Msa0244380 | 0.837913 | 3.925969e-57 | -8.615850e-47 |
Msa0244380 | Msa0282890 | 0.922545 | 8.558331e-89 | -8.615850e-47 |
Msa0244380 | Msa0304840 | 0.810730 | 9.967488e-51 | -8.615850e-47 |
Msa0244380 | Msa0307570 | 0.806381 | 8.455961e-50 | -8.615850e-47 |
Msa0244380 | Msa0321170 | 0.891054 | 5.635542e-74 | -8.615850e-47 |
Msa0244380 | Msa0321190 | 0.914689 | 1.427061e-84 | -8.615850e-47 |
Msa0244380 | Msa0322590 | 0.804726 | 1.880858e-49 | -8.615850e-47 |
Msa0244380 | Msa0333160 | 0.807062 | 6.072530e-50 | -8.615850e-47 |
Msa0244380 | Msa0341230 | 0.803185 | 3.933582e-49 | -8.615850e-47 |
Msa0244380 | Msa0343190 | 0.821753 | 3.414767e-53 | -8.615850e-47 |
Msa0244380 | Msa0346990 | 0.857908 | 1.184113e-62 | -8.615850e-47 |
Msa0244380 | Msa0363810 | 0.815847 | 7.494154e-52 | -8.615850e-47 |
Msa0244380 | Msa0384670 | 0.820657 | 6.108835e-53 | -8.615850e-47 |
Msa0244380 | Msa0392200 | 0.853021 | 3.145750e-61 | -8.615850e-47 |
Msa0244380 | Msa0394690 | 0.810585 | 1.071265e-50 | -8.615850e-47 |
Msa0244380 | Msa0411410 | 0.801688 | 7.999993e-49 | -8.615850e-47 |
Msa0244380 | Msa0434570 | 0.836339 | 9.918618e-57 | -8.615850e-47 |
Msa0244380 | Msa0434770 | 0.830769 | 2.436475e-55 | -8.615850e-47 |
Msa0244380 | Msa0461590 | 0.800976 | 1.119132e-48 | -8.615850e-47 |
Msa0244380 | Msa0473980 | 0.818679 | 1.728809e-52 | -8.615850e-47 |
Msa0244380 | Msa0474700 | 0.812176 | 4.836508e-51 | -8.615850e-47 |
Msa0244380 | Msa0478580 | 0.836383 | 9.664342e-57 | -8.615850e-47 |
Msa0244380 | Msa0483740 | 0.813898 | 2.026784e-51 | -8.615850e-47 |
Msa0244380 | Msa0510290 | 0.815599 | 8.511761e-52 | -8.615850e-47 |
Msa0244380 | Msa0516120 | 0.810801 | 9.622181e-51 | -8.615850e-47 |
Msa0244380 | Msa0527190 | 0.820691 | 5.999915e-53 | -8.615850e-47 |
Msa0244380 | Msa0576680 | 0.810088 | 1.371638e-50 | -8.615850e-47 |
Msa0244380 | Msa0578090 | 0.806085 | 9.762535e-50 | -8.615850e-47 |
Msa0244380 | Msa0583500 | 0.802183 | 6.329852e-49 | -8.615850e-47 |
Msa0244380 | Msa0584550 | 0.807902 | 4.029062e-50 | -8.615850e-47 |
Msa0244380 | Msa0588120 | 0.809102 | 2.234029e-50 | -8.615850e-47 |
Msa0244380 | Msa0628500 | 0.807843 | 4.145679e-50 | -8.615850e-47 |
Msa0244380 | Msa0642720 | 0.800070 | 1.712710e-48 | -8.615850e-47 |
Msa0244380 | Msa0646400 | 0.802221 | 6.217541e-49 | -8.615850e-47 |
Msa0244380 | Msa0652760 | 0.800743 | 1.249037e-48 | -8.615850e-47 |
Msa0244380 | Msa0679100 | 0.826841 | 2.174540e-54 | -8.615850e-47 |
Msa0244380 | Msa0687450 | 0.806622 | 7.523445e-50 | -8.615850e-47 |
Msa0244380 | Msa0689420 | 0.801210 | 1.002493e-48 | -8.615850e-47 |
Msa0244380 | Msa0689760 | 0.846827 | 1.700200e-59 | -8.615850e-47 |
Msa0244380 | Msa0698100 | 0.801556 | 8.515528e-49 | -8.615850e-47 |
Msa0244380 | Msa0716410 | 0.829022 | 6.492767e-55 | -8.615850e-47 |
Msa0244380 | Msa0716860 | 0.857205 | 1.912298e-62 | -8.615850e-47 |
Msa0244380 | Msa0742510 | 0.811045 | 8.519676e-51 | -8.615850e-47 |
Msa0244380 | Msa0743530 | 0.806961 | 6.380078e-50 | -8.615850e-47 |
Msa0244380 | Msa0744090 | 0.801288 | 9.664237e-49 | -8.615850e-47 |
Msa0244380 | Msa0744100 | 0.809751 | 1.620385e-50 | -8.615850e-47 |
Msa0244380 | Msa0747720 | -0.821808 | 3.315432e-53 | -8.615850e-47 |
Msa0244380 | Msa0749400 | 0.806197 | 9.247701e-50 | -8.615850e-47 |
Msa0244380 | Msa0756930 | 0.808288 | 3.333842e-50 | -8.615850e-47 |
Msa0244380 | Msa0757800 | 0.838433 | 2.884105e-57 | -8.615850e-47 |
Msa0244380 | Msa0760770 | 0.811720 | 6.078549e-51 | -8.615850e-47 |
Msa0244380 | Msa0761890 | 0.807063 | 6.069941e-50 | -8.615850e-47 |
Msa0244380 | Msa0779550 | 0.811581 | 6.518735e-51 | -8.615850e-47 |
Msa0244380 | Msa0788120 | 0.815307 | 9.886296e-52 | -8.615850e-47 |
Msa0244380 | Msa0799000 | 0.821229 | 4.511894e-53 | -8.615850e-47 |
Msa0244380 | Msa0825270 | 0.810792 | 9.665765e-51 | -8.615850e-47 |
Msa0244380 | Msa0825280 | 0.800526 | 1.382947e-48 | -8.615850e-47 |
Msa0244380 | Msa0836500 | 0.810166 | 1.319507e-50 | -8.615850e-47 |
Msa0244380 | Msa0837410 | 0.825776 | 3.898829e-54 | -8.615850e-47 |
Msa0244380 | Msa0851470 | 0.806123 | 9.584062e-50 | -8.615850e-47 |
Msa0244380 | Msa0869010 | 0.821505 | 3.897117e-53 | -8.615850e-47 |
Msa0244380 | Msa0888940 | 0.804531 | 2.065816e-49 | -8.615850e-47 |
Msa0244380 | Msa0898660 | 0.805486 | 1.304495e-49 | -8.615850e-47 |
Msa0244380 | Msa0905590 | 0.804711 | 1.894573e-49 | -8.615850e-47 |
Msa0244380 | Msa0937430 | 0.804843 | 1.777840e-49 | -8.615850e-47 |
Msa0244380 | Msa0969330 | 0.803856 | 2.854986e-49 | -8.615850e-47 |
Msa0244380 | Msa0980940 | 0.809932 | 1.482079e-50 | -8.615850e-47 |
Msa0244380 | Msa0981430 | 0.809409 | 1.919572e-50 | -8.615850e-47 |
Msa0244380 | Msa0986920 | 0.811726 | 6.059956e-51 | -8.615850e-47 |
Msa0244380 | Msa0993530 | 0.802102 | 6.580114e-49 | -8.615850e-47 |
Msa0244380 | Msa0996020 | 0.836729 | 7.889141e-57 | -8.615850e-47 |
Msa0244380 | Msa0998590 | 0.800403 | 1.465388e-48 | -8.615850e-47 |
Msa0244380 | Msa1004420 | 0.810084 | 1.373926e-50 | -8.615850e-47 |
Msa0244380 | Msa1010070 | 0.818926 | 1.518772e-52 | -8.615850e-47 |
Msa0244380 | Msa1010460 | 0.828400 | 9.180648e-55 | -8.615850e-47 |
Msa0244380 | Msa1028350 | 0.802763 | 4.808318e-49 | -8.615850e-47 |
Msa0244380 | Msa1072600 | 0.807552 | 4.779699e-50 | -8.615850e-47 |
Msa0244380 | Msa1083880 | 0.807897 | 4.039178e-50 | -8.615850e-47 |
Msa0244380 | Msa1088410 | 0.806310 | 8.751997e-50 | -8.615850e-47 |
Msa0244380 | Msa1113590 | 0.821979 | 3.027203e-53 | -8.615850e-47 |
Msa0244380 | Msa1145740 | 0.802910 | 4.482915e-49 | -8.615850e-47 |
Msa0244380 | Msa1169720 | 0.814108 | 1.822271e-51 | -8.615850e-47 |
Msa0244380 | Msa1181170 | -0.840715 | 7.357181e-58 | -8.615850e-47 |
Msa0244380 | Msa1198880 | 0.815510 | 8.909865e-52 | -8.615850e-47 |
Msa0244380 | Msa1201640 | 0.811566 | 6.565508e-51 | -8.615850e-47 |
Msa0244380 | Msa1211340 | 0.822900 | 1.849250e-53 | -8.615850e-47 |
Msa0244380 | Msa1214320 | 0.837041 | 6.566039e-57 | -8.615850e-47 |
Msa0244380 | Msa1227320 | 0.805272 | 1.445872e-49 | -8.615850e-47 |
Msa0244380 | Msa1235250 | 0.805003 | 1.646109e-49 | -8.615850e-47 |
Msa0244380 | Msa1259640 | 0.827136 | 1.848310e-54 | -8.615850e-47 |
Msa0244380 | Msa1261070 | 0.830936 | 2.218184e-55 | -8.615850e-47 |
Msa0244380 | Msa1282500 | 0.814042 | 1.883927e-51 | -8.615850e-47 |
Msa0244380 | Msa1286550 | 0.801081 | 1.065182e-48 | -8.615850e-47 |
Msa0244380 | Msa1296300 | 0.822146 | 2.768979e-53 | -8.615850e-47 |
Msa0244380 | Msa1300450 | 0.809651 | 1.703243e-50 | -8.615850e-47 |
Msa0244380 | Msa1302060 | 0.830580 | 2.710239e-55 | -8.615850e-47 |
Msa0244380 | Msa1304860 | 0.803226 | 3.856438e-49 | -8.615850e-47 |
Msa0244380 | Msa1320820 | 0.851676 | 7.598254e-61 | -8.615850e-47 |
Msa0244380 | Msa1329450 | 0.811414 | 7.085790e-51 | -8.615850e-47 |
Msa0244380 | Msa1329790 | 0.827333 | 1.657355e-54 | -8.615850e-47 |
Msa0244380 | Msa1338250 | 0.824519 | 7.725484e-54 | -8.615850e-47 |
Msa0244380 | Msa1338830 | 0.820019 | 8.557915e-53 | -8.615850e-47 |
Msa0244380 | Msa1344310 | 0.819457 | 1.149961e-52 | -8.615850e-47 |
Msa0244380 | Msa1354200 | 0.808661 | 2.775791e-50 | -8.615850e-47 |
Msa0244380 | Msa1356610 | 0.822579 | 2.196586e-53 | -8.615850e-47 |
Msa0244380 | Msa1366300 | 0.809962 | 1.460039e-50 | -8.615850e-47 |
Msa0244380 | Msa1371520 | 0.823763 | 1.162624e-53 | -8.615850e-47 |
Msa0244380 | Msa1373820 | 0.807846 | 4.140570e-50 | -8.615850e-47 |
Msa0244380 | Msa1393800 | 0.802113 | 6.544888e-49 | -8.615850e-47 |
Msa0244380 | Msa1393820 | 0.802265 | 6.088998e-49 | -8.615850e-47 |
Msa0244380 | Msa1398860 | 0.839455 | 1.568973e-57 | -8.615850e-47 |
Msa0244380 | Msa1411950 | 0.807695 | 4.458412e-50 | -8.615850e-47 |
Msa0244380 | Msa1416260 | 0.811285 | 7.555503e-51 | -8.615850e-47 |
Msa0244380 | Msa1420250 | 0.847115 | 1.418650e-59 | -8.615850e-47 |
Msa0244380 | Msa1422840 | 0.803555 | 3.297105e-49 | -8.615850e-47 |
Msa0244380 | Msa1422910 | 0.807750 | 4.339165e-50 | -8.615850e-47 |
Msa0244380 | Msa1433220 | 0.814026 | 1.899660e-51 | -8.615850e-47 |
Msa0244380 | Msa1443930 | 0.807481 | 4.950339e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244380 | MtrunA17_Chr2g0298101 | 98.750 | 320 | 2 | 1 | 1 | 320 | 1 | 318 | 0.0 | 653 |
Msa0244380 | MtrunA17_Chr5g0396951 | 67.347 | 294 | 94 | 1 | 12 | 305 | 13 | 304 | 9.99e-156 | 437 |
Msa0244380 | MtrunA17_Chr4g0049381 | 65.781 | 301 | 100 | 2 | 16 | 315 | 16 | 314 | 2.91e-151 | 427 |
Msa0244380 | MtrunA17_Chr7g0275331 | 65.116 | 301 | 102 | 2 | 16 | 315 | 16 | 314 | 3.14e-151 | 427 |
Msa0244380 | MtrunA17_Chr6g0449291 | 60.535 | 299 | 113 | 4 | 21 | 319 | 10 | 303 | 3.60e-129 | 370 |
Msa0244380 | MtrunA17_Chr4g0000451 | 81.868 | 182 | 33 | 0 | 136 | 317 | 6 | 187 | 7.13e-114 | 327 |
Msa0244380 | MtrunA17_Chr4g0000441 | 68.103 | 116 | 37 | 0 | 19 | 134 | 31 | 146 | 5.30e-57 | 181 |
Msa0244380 | MtrunA17_Chr5g0404381 | 34.146 | 287 | 168 | 7 | 16 | 300 | 43 | 310 | 7.67e-42 | 147 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0244380 | AT5G57330.1 | 80.000 | 305 | 61 | 0 | 14 | 318 | 8 | 312 | 0.0 | 528 |
Msa0244380 | AT3G61610.1 | 65.667 | 300 | 100 | 2 | 16 | 314 | 16 | 313 | 4.10e-151 | 427 |
Msa0244380 | AT3G61610.2 | 65.667 | 300 | 100 | 2 | 16 | 314 | 10 | 307 | 4.41e-151 | 426 |
Msa0244380 | AT3G01590.1 | 63.880 | 299 | 104 | 3 | 21 | 319 | 10 | 304 | 3.51e-143 | 406 |
Msa0244380 | AT3G01590.2 | 63.880 | 299 | 104 | 3 | 21 | 319 | 10 | 304 | 3.51e-143 | 406 |
Msa0244380 | AT5G14500.1 | 63.211 | 299 | 106 | 3 | 21 | 319 | 10 | 304 | 5.78e-142 | 403 |
Msa0244380 | AT4G23730.1 | 63.356 | 292 | 103 | 3 | 16 | 305 | 17 | 306 | 2.46e-140 | 399 |
Msa0244380 | AT4G23730.3 | 62.416 | 298 | 102 | 4 | 16 | 305 | 17 | 312 | 3.10e-138 | 394 |
Msa0244380 | AT5G14500.2 | 58.333 | 324 | 106 | 4 | 21 | 319 | 10 | 329 | 7.78e-136 | 389 |
Msa0244380 | AT4G23730.2 | 64.207 | 271 | 93 | 3 | 37 | 305 | 3 | 271 | 8.94e-133 | 379 |
Msa0244380 | AT4G25900.1 | 59.170 | 289 | 111 | 3 | 17 | 305 | 34 | 315 | 8.23e-128 | 368 |
Msa0244380 | AT5G66530.4 | 34.237 | 295 | 173 | 8 | 8 | 300 | 2 | 277 | 2.99e-46 | 158 |
Msa0244380 | AT5G66530.1 | 34.237 | 295 | 173 | 8 | 8 | 300 | 30 | 305 | 5.56e-46 | 158 |
Msa0244380 | AT5G66530.2 | 34.237 | 295 | 173 | 8 | 8 | 300 | 30 | 305 | 5.56e-46 | 158 |
Msa0244380 | AT5G66530.3 | 34.237 | 295 | 173 | 8 | 8 | 300 | 30 | 305 | 5.56e-46 | 158 |
Find 132 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAATCATTCACTTAGTATTT+TGG | 0.138940 | 2_2:-22641383 | Msa0244380:three_prime_UTR |
ACTTTATGATTATAATTTAA+AGG | 0.190641 | 2_2:-22641293 | Msa0244380:three_prime_UTR |
TTTAATAATAAACAAATTAT+AGG | 0.212964 | 2_2:+22641349 | None:intergenic |
TGTTTATTATTAAATGCTAT+TGG | 0.238326 | 2_2:-22641340 | Msa0244380:three_prime_UTR |
TTGAAAATCTGTTGAATTGT+AGG | 0.238694 | 2_2:+22641444 | None:intergenic |
TATGAATTTCTCGGGTTCTT+TGG | 0.244157 | 2_2:+22647748 | None:intergenic |
CAAAGTCTATGGCTGATTTC+GGG | 0.245986 | 2_2:-22642349 | Msa0244380:CDS |
GTAGCTTGTTGCAAAGTTAA+TGG | 0.276283 | 2_2:-22641679 | Msa0244380:three_prime_UTR |
TAAGCAAATGTGAACGAAAA+TGG | 0.285438 | 2_2:+22644769 | None:intergenic |
AGCATATATTTAAAATAAAA+AGG | 0.287974 | 2_2:+22641186 | None:intergenic |
CAGGTTGTGTCAAATATTTA+TGG | 0.297497 | 2_2:-22641249 | Msa0244380:three_prime_UTR |
GCAAAGTCTATGGCTGATTT+CGG | 0.300409 | 2_2:-22642350 | Msa0244380:CDS |
CCACATTAGTCATCCATTAT+AGG | 0.307361 | 2_2:+22641540 | None:intergenic |
TTAATAATAAACAAATTATA+GGG | 0.310118 | 2_2:+22641350 | None:intergenic |
TGATCCCCAGAGAGTTCTTC+AGG | 0.316466 | 2_2:-22642192 | Msa0244380:CDS |
CTTTATGATTATAATTTAAA+GGG | 0.321424 | 2_2:-22641292 | Msa0244380:three_prime_UTR |
CACATGGATTTGCTAGAAAT+CGG | 0.325106 | 2_2:-22645137 | Msa0244380:CDS |
TTCAGTGAAGTTCGGGTAGA+AGG | 0.327252 | 2_2:-22643792 | Msa0244380:intron |
TACTAGTGGTGTGGAATCCT+TGG | 0.327612 | 2_2:-22642382 | Msa0244380:intron |
AAAAGGAATCCCTCTGGGTC+TGG | 0.331384 | 2_2:+22641406 | None:intergenic |
ACATGCAGGGGCAAAATTAC+AGG | 0.335699 | 2_2:+22641640 | None:intergenic |
GGTAAAGAAGTGGGGAAAAC+AGG | 0.340045 | 2_2:+22641207 | None:intergenic |
GTTTATTATTAAATGCTATT+GGG | 0.347612 | 2_2:-22641339 | Msa0244380:three_prime_UTR |
TCAATGATTGCAATCTTTGT+AGG | 0.348711 | 2_2:+22642958 | None:intergenic |
CATACTTGTGGAAAGCATAT+TGG | 0.354504 | 2_2:+22646189 | None:intergenic |
CCTAACAGTTGAAGCTCTAT+AGG | 0.364297 | 2_2:+22647613 | None:intergenic |
CTCAAATTATTTGTTGGAAA+AGG | 0.368191 | 2_2:+22645087 | None:intergenic |
CTTCCTTTCCATTCTTCTCC+AGG | 0.370137 | 2_2:+22642260 | None:intergenic |
CACATTAGTCATCCATTATA+GGG | 0.370282 | 2_2:+22641541 | None:intergenic |
TGATGTTGACATCTCGAATT+CGG | 0.375753 | 2_2:-22644813 | Msa0244380:CDS |
ATCGAGACCATTGATACCTT+TGG | 0.378504 | 2_2:+22647512 | None:intergenic |
CAAGGAGCGCTTTACTGAAC+AGG | 0.381888 | 2_2:-22643733 | Msa0244380:CDS |
GATTTGCTAGAAATCGGGTT+TGG | 0.388396 | 2_2:-22645131 | Msa0244380:CDS |
GCATGTGTTCAGTGAAGTTC+GGG | 0.389823 | 2_2:-22643799 | Msa0244380:intron |
TGCATGTGTTCAGTGAAGTT+CGG | 0.389851 | 2_2:-22643800 | Msa0244380:intron |
CGCCGTGTGTATGAATTTCT+CGG | 0.391393 | 2_2:+22647739 | None:intergenic |
AGGTTGTGTCAAATATTTAT+GGG | 0.393955 | 2_2:-22641248 | Msa0244380:three_prime_UTR |
CCTATAGAGCTTCAACTGTT+AGG | 0.395768 | 2_2:-22647613 | Msa0244380:five_prime_UTR |
AAGATGAATTCATGTTGGTT+AGG | 0.399082 | 2_2:-22641602 | Msa0244380:three_prime_UTR |
ATTTGCTAGAAATCGGGTTT+GGG | 0.400244 | 2_2:-22645130 | Msa0244380:CDS |
GTACCGTCTGAGGGTAGCTT+TGG | 0.409016 | 2_2:-22644851 | Msa0244380:CDS |
CTGAAGAAGACATGAAGATC+TGG | 0.413789 | 2_2:-22645032 | Msa0244380:CDS |
AGCTGCCCTGAAGAACTCTC+TGG | 0.420120 | 2_2:+22642186 | None:intergenic |
GTTTGCAAACCATGGAAACT+TGG | 0.421066 | 2_2:-22645163 | Msa0244380:CDS |
AAAGTGTTTAGTGTCGTTGT+TGG | 0.426061 | 2_2:+22647705 | None:intergenic |
GGATAAGAAAGCAAAGTCTA+TGG | 0.429417 | 2_2:-22642360 | Msa0244380:CDS |
GCTTTGCTCAAATTATTTGT+TGG | 0.430674 | 2_2:+22645081 | None:intergenic |
CTGTGTTCTGTGTCCTGTAC+AGG | 0.434353 | 2_2:-22642151 | Msa0244380:intron |
ACTAGTGGTGTGGAATCCTT+GGG | 0.437044 | 2_2:-22642381 | Msa0244380:intron |
ATCTTCATGTCTTCTTCAGA+GGG | 0.440145 | 2_2:+22645036 | None:intergenic |
TACCGTCTGAGGGTAGCTTT+GGG | 0.445671 | 2_2:-22644850 | Msa0244380:CDS |
TTGGGTAATTACTACATCCT+TGG | 0.451032 | 2_2:-22641321 | Msa0244380:three_prime_UTR |
GATCTTCATGTCTTCTTCAG+AGG | 0.451439 | 2_2:+22645035 | None:intergenic |
CATGTGATTCCAAGTTTCCA+TGG | 0.458751 | 2_2:+22645154 | None:intergenic |
ACATGGATTTGCTAGAAATC+GGG | 0.458820 | 2_2:-22645136 | Msa0244380:CDS |
AGATAGTACTGACCAGCATC+AGG | 0.460058 | 2_2:+22642892 | None:intergenic |
AAAGGAATCCCTCTGGGTCT+GGG | 0.469403 | 2_2:+22641407 | None:intergenic |
TTTGCAGTATTTACCTGTAC+AGG | 0.472229 | 2_2:+22642138 | None:intergenic |
CTGAGGGTAGCTTTGGGACC+CGG | 0.476818 | 2_2:-22644844 | Msa0244380:CDS |
CTTTGAAACCTGGAGAAGAA+TGG | 0.477692 | 2_2:-22642268 | Msa0244380:CDS |
GACTTTGCTTTCTTATCCCA+AGG | 0.482545 | 2_2:+22642365 | None:intergenic |
GATACCTTTGGTTAACGTAA+AGG | 0.483563 | 2_2:+22647524 | None:intergenic |
TATATTTATACTCGTTGTTG+TGG | 0.486476 | 2_2:+22647636 | None:intergenic |
TGTCAACATCAAATCTCCTC+CGG | 0.489606 | 2_2:+22644825 | None:intergenic |
ACGTTAACCAAAGGTATCAA+TGG | 0.500062 | 2_2:-22647519 | Msa0244380:CDS |
GCCGTGTGTATGAATTTCTC+GGG | 0.505192 | 2_2:+22647740 | None:intergenic |
TTATTTGTTGGAAAAGGAGG+AGG | 0.506185 | 2_2:+22645093 | None:intergenic |
CAGACTTACTTCTGATTCAA+AGG | 0.510507 | 2_2:+22643698 | None:intergenic |
TGCCCACTACAGTAACTAGA+TGG | 0.512664 | 2_2:+22642218 | None:intergenic |
AGAGGCTGCTAATATTGAAA+AGG | 0.515286 | 2_2:-22642297 | Msa0244380:CDS |
AAAGATGGCCTTCCTGATGC+TGG | 0.515378 | 2_2:-22642904 | Msa0244380:intron |
TTGCAAAGTTAATGGATGAA+AGG | 0.516792 | 2_2:-22641671 | Msa0244380:three_prime_UTR |
AGAGTCCACATTTCTTGCCA+TGG | 0.516946 | 2_2:-22641483 | Msa0244380:three_prime_UTR |
TTCCATCTAGTTACTGTAGT+GGG | 0.517507 | 2_2:-22642220 | Msa0244380:CDS |
AGGTATCAATGGTCTCGATA+AGG | 0.518328 | 2_2:-22647508 | Msa0244380:CDS |
TGATTCAAAAGGAATCCCTC+TGG | 0.522994 | 2_2:+22641400 | None:intergenic |
AGGAGGAGGGTCATCTTCAA+TGG | 0.524499 | 2_2:+22645107 | None:intergenic |
GGTAGAAGGATTAGAGACCT+TGG | 0.525941 | 2_2:-22643778 | Msa0244380:CDS |
TACTAAGTGAATGATTCAAA+AGG | 0.527311 | 2_2:+22641389 | None:intergenic |
AAATTATTTGTTGGAAAAGG+AGG | 0.527511 | 2_2:+22645090 | None:intergenic |
GCTGCCCTGAAGAACTCTCT+GGG | 0.528642 | 2_2:+22642187 | None:intergenic |
GGCTATCTTTAAGCCTCCTA+AGG | 0.532351 | 2_2:-22646229 | Msa0244380:CDS |
ATCCCTCCACGAATAGCCTT+AGG | 0.532408 | 2_2:+22646213 | None:intergenic |
ACATGAAGATCTGGAATCAC+AGG | 0.534377 | 2_2:-22645023 | Msa0244380:intron |
CATGGAAACTTGGAATCACA+TGG | 0.537927 | 2_2:-22645153 | Msa0244380:CDS |
CCTGCATGTTCCATCTGTGT+TGG | 0.550080 | 2_2:-22641626 | Msa0244380:three_prime_UTR |
AAGCCTCCTAAGGCTATTCG+TGG | 0.556125 | 2_2:-22646219 | Msa0244380:CDS |
TATTTGCAGTTTGCAAACCA+TGG | 0.562559 | 2_2:-22645171 | Msa0244380:intron |
CCAACACAGATGGAACATGC+AGG | 0.562888 | 2_2:+22641626 | None:intergenic |
TAAGCATATGCTTTGTGTAG+AGG | 0.564500 | 2_2:-22642315 | Msa0244380:CDS |
GATTCAAAAGGAATCCCTCT+GGG | 0.564747 | 2_2:+22641401 | None:intergenic |
ATTCATCTTTCCAACACAGA+TGG | 0.565820 | 2_2:+22641616 | None:intergenic |
TTCGGAACACAAACAGTGAT+GGG | 0.567587 | 2_2:-22644795 | Msa0244380:CDS |
GATCCCCAGAGAGTTCTTCA+GGG | 0.569162 | 2_2:-22642191 | Msa0244380:CDS |
ATTCGGAACACAAACAGTGA+TGG | 0.572579 | 2_2:-22644796 | Msa0244380:CDS |
AAGGCTATCACTTTGAAACC+TGG | 0.573783 | 2_2:-22642278 | Msa0244380:CDS |
TTGGAAAGATGAATTCATGT+TGG | 0.574760 | 2_2:-22641607 | Msa0244380:three_prime_UTR |
ACGGTGGACATGTGACTTCG+TGG | 0.575222 | 2_2:-22647139 | Msa0244380:CDS |
CTCCTAAGGCTATTCGTGGA+GGG | 0.577936 | 2_2:-22646215 | Msa0244380:CDS |
TATTTGTTGGAAAAGGAGGA+GGG | 0.579815 | 2_2:+22645094 | None:intergenic |
TCTTGACAACTTGCAGAACA+AGG | 0.580190 | 2_2:-22643751 | Msa0244380:CDS |
TGCATGACAGAATCGTCGAC+AGG | 0.580658 | 2_2:-22641268 | Msa0244380:three_prime_UTR |
GTCAACATCAAATCTCCTCC+GGG | 0.583810 | 2_2:+22644826 | None:intergenic |
CAAGTTGTCAAGATAATCCA+AGG | 0.585326 | 2_2:+22643761 | None:intergenic |
TCTTCCTTTACGTTAACCAA+AGG | 0.595171 | 2_2:-22647528 | Msa0244380:CDS |
CATGCAGGGGCAAAATTACA+GGG | 0.598780 | 2_2:+22641641 | None:intergenic |
TTTAAGAATCAAATCAACAA+AGG | 0.599913 | 2_2:+22645059 | None:intergenic |
CCTCCACGAATAGCCTTAGG+AGG | 0.604158 | 2_2:+22646216 | None:intergenic |
ATCTCGTGGCGCTTCCGCTG+AGG | 0.604527 | 2_2:-22647472 | Msa0244380:intron |
GTTCTTCTTCGTGAATCTCG+TGG | 0.608797 | 2_2:-22647486 | Msa0244380:CDS |
CCTATAATGGATGACTAATG+TGG | 0.609923 | 2_2:-22641540 | Msa0244380:three_prime_UTR |
CAACACAGATGGAACATGCA+GGG | 0.612106 | 2_2:+22641627 | None:intergenic |
AAACCTGGAGAAGAATGGAA+AGG | 0.623143 | 2_2:-22642263 | Msa0244380:CDS |
TTGTAGATTTATCTGTACGG+TGG | 0.625261 | 2_2:-22647155 | Msa0244380:intron |
AAAGTCTATGGCTGATTTCG+GGG | 0.626184 | 2_2:-22642348 | Msa0244380:CDS |
GATTTGTAGATTTATCTGTA+CGG | 0.629615 | 2_2:-22647158 | Msa0244380:intron |
GTCCCAAAGCTACCCTCAGA+CGG | 0.631656 | 2_2:+22644848 | None:intergenic |
AACACAGATGGAACATGCAG+GGG | 0.635228 | 2_2:+22641628 | None:intergenic |
TAATCATAAAGTATTCTCCA+AGG | 0.638797 | 2_2:+22641304 | None:intergenic |
CCTCCTAAGGCTATTCGTGG+AGG | 0.641484 | 2_2:-22646216 | Msa0244380:CDS |
AGTACTGACCAGCATCAGGA+AGG | 0.642555 | 2_2:+22642896 | None:intergenic |
GTTCCATCTAGTTACTGTAG+TGG | 0.643465 | 2_2:-22642221 | Msa0244380:CDS |
TTGAATGGCCCAGACCCAGA+GGG | 0.654178 | 2_2:-22641415 | Msa0244380:three_prime_UTR |
ACCCGAGAAATTCATACACA+CGG | 0.664013 | 2_2:-22647741 | Msa0244380:five_prime_UTR |
AAGGAGCGCTTTACTGAACA+GGG | 0.674715 | 2_2:-22643732 | Msa0244380:CDS |
CTGCCCTGAAGAACTCTCTG+GGG | 0.675919 | 2_2:+22642188 | None:intergenic |
ATTAGTCATCCATTATAGGG+AGG | 0.677435 | 2_2:+22641544 | None:intergenic |
GTGGAAGAATGATCATGCTG+AGG | 0.679697 | 2_2:-22647120 | Msa0244380:CDS |
AGGGTAGCTTTGGGACCCGG+AGG | 0.683403 | 2_2:-22644841 | Msa0244380:CDS |
GTTGAATGGCCCAGACCCAG+AGG | 0.688567 | 2_2:-22641416 | Msa0244380:three_prime_UTR |
CGGTTACGATTATACCTCAG+CGG | 0.755309 | 2_2:+22647458 | None:intergenic |
CGAGAAATTCATACACACGG+CGG | 0.820577 | 2_2:-22647738 | Msa0244380:five_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTGTCAAAAAAAAATAAAA+AGG | + | chr2_2:22642833-22642852 | None:intergenic | 10.0% |
!! | TTAATTATATCAATTTCTAT+TGG | + | chr2_2:22643678-22643697 | None:intergenic | 10.0% |
!! | CAAATTAATATACTATTAAT+TGG | - | chr2_2:22644430-22644449 | Msa0244380:intron | 10.0% |
!!! | ATAACTTTTTTTTGAAAAAA+AGG | - | chr2_2:22645411-22645430 | Msa0244380:intron | 10.0% |
!!! | TTATTATTTTTTTTTACTAG+TGG | - | chr2_2:22646588-22646607 | Msa0244380:intron | 10.0% |
!!! | ATTTAACTTTTTTAATCTTT+TGG | + | chr2_2:22647058-22647077 | None:intergenic | 10.0% |
!! | ACTTTATGATTATAATTTAA+AGG | - | chr2_2:22647691-22647710 | Msa0244380:five_prime_UTR | 10.0% |
!! | CTTTATGATTATAATTTAAA+GGG | - | chr2_2:22647692-22647711 | Msa0244380:five_prime_UTR | 10.0% |
!!! | AGCATATATTTAAAATAAAA+AGG | + | chr2_2:22647801-22647820 | None:intergenic | 10.0% |
!! | TATATCATAATACTAAATTG+CGG | + | chr2_2:22642221-22642240 | None:intergenic | 15.0% |
!! | AAATCATTACAATTTCTAAA+TGG | - | chr2_2:22643723-22643742 | Msa0244380:CDS | 15.0% |
!!! | TTACAATTTTTTTTAATACC+TGG | - | chr2_2:22644011-22644030 | Msa0244380:intron | 15.0% |
!! | TAAAATTAATGAAATGTTGT+TGG | + | chr2_2:22644405-22644424 | None:intergenic | 15.0% |
!! | AAAAAAGTTATTCAAATGAA+AGG | + | chr2_2:22645402-22645421 | None:intergenic | 15.0% |
!! | TAAATATAAAAGAACAGATA+AGG | - | chr2_2:22646156-22646175 | Msa0244380:intron | 15.0% |
!!! | ATAAACCTTTTATTACAATT+AGG | - | chr2_2:22646517-22646536 | Msa0244380:intron | 15.0% |
!!! | TTTTTTGTATCAAAAACTAA+AGG | + | chr2_2:22646952-22646971 | None:intergenic | 15.0% |
!! | TGTTTATTATTAAATGCTAT+TGG | - | chr2_2:22647644-22647663 | Msa0244380:five_prime_UTR | 15.0% |
!! | GTTTATTATTAAATGCTATT+GGG | - | chr2_2:22647645-22647664 | Msa0244380:five_prime_UTR | 15.0% |
!!! | GAATCTAGAATAATTGAAAT+CGG | + | chr2_2:22641613-22641632 | None:intergenic | 20.0% |
!! | CATTAATCGTTGTTAATTAA+CGG | - | chr2_2:22641684-22641703 | Msa0244380:intron | 20.0% |
!! | AAAAGGAAAATGAAAAATAG+AGG | - | chr2_2:22642058-22642077 | Msa0244380:intron | 20.0% |
!! | ATTACAACAACAACAAAAAA+AGG | + | chr2_2:22642162-22642181 | None:intergenic | 20.0% |
!! | TTGAAGCAAATATTAATATC+AGG | + | chr2_2:22642555-22642574 | None:intergenic | 20.0% |
!! | GATATTAATATTTGCTTCAA+TGG | - | chr2_2:22642555-22642574 | Msa0244380:intron | 20.0% |
!! | TTGATTAGATGATTGATATA+TGG | - | chr2_2:22642695-22642714 | Msa0244380:intron | 20.0% |
!! | TTAACAACAATGTTAATTGA+GGG | - | chr2_2:22643204-22643223 | Msa0244380:intron | 20.0% |
!!! | AAAGAAAGTTTTCATTATCT+TGG | + | chr2_2:22643570-22643589 | None:intergenic | 20.0% |
!! | TTTAAGAATCAAATCAACAA+AGG | + | chr2_2:22643928-22643947 | None:intergenic | 20.0% |
!!! | TGCTTATCATACTTATTTTT+CGG | - | chr2_2:22644232-22644251 | Msa0244380:intron | 20.0% |
!! | AAAAGAACAAGAAATATATG+TGG | + | chr2_2:22645095-22645114 | None:intergenic | 20.0% |
!!! | TAGCTTTACTTTCTAAAAAT+TGG | - | chr2_2:22645115-22645134 | Msa0244380:CDS | 20.0% |
!! | ATTCATTTGACTGAAATAAA+TGG | - | chr2_2:22645369-22645388 | Msa0244380:intron | 20.0% |
!! | AGAATAAGTATAGAATAAAG+GGG | + | chr2_2:22645689-22645708 | None:intergenic | 20.0% |
!! | CAGAATAAGTATAGAATAAA+GGG | + | chr2_2:22645690-22645709 | None:intergenic | 20.0% |
!! | ACAGAATAAGTATAGAATAA+AGG | + | chr2_2:22645691-22645710 | None:intergenic | 20.0% |
!! | TTCTATACTTATTCTGTAAT+AGG | - | chr2_2:22645694-22645713 | Msa0244380:intron | 20.0% |
!! | TCTATACTTATTCTGTAATA+GGG | - | chr2_2:22645695-22645714 | Msa0244380:intron | 20.0% |
!! | ATTAGAGTTTAGAAAAATAC+AGG | + | chr2_2:22645864-22645883 | None:intergenic | 20.0% |
!! | TACAACCTAATTGTAATAAA+AGG | + | chr2_2:22646525-22646544 | None:intergenic | 20.0% |
!! | ATATATAGACTTAAAAACTG+TGG | + | chr2_2:22646992-22647011 | None:intergenic | 20.0% |
!! | AGATATTTAAATGGATATGA+AGG | + | chr2_2:22647256-22647275 | None:intergenic | 20.0% |
!! | TTCATATCCATTTAAATATC+TGG | - | chr2_2:22647255-22647274 | Msa0244380:intron | 20.0% |
!! | AAATAAAAAGGTAAAGAAGT+GGG | + | chr2_2:22647789-22647808 | None:intergenic | 20.0% |
!! | AAAATAAAAAGGTAAAGAAG+TGG | + | chr2_2:22647790-22647809 | None:intergenic | 20.0% |
! | TATATTTATACTCGTTGTTG+TGG | + | chr2_2:22641351-22641370 | None:intergenic | 25.0% |
! | ATAGATCAAGAACAGAAAAA+CGG | + | chr2_2:22641549-22641568 | None:intergenic | 25.0% |
! | ATTTGACTGTGAAATTTAGA+AGG | - | chr2_2:22641741-22641760 | Msa0244380:intron | 25.0% |
! | GATTTGTAGATTTATCTGTA+CGG | - | chr2_2:22641826-22641845 | Msa0244380:intron | 25.0% |
!! | TCGATAATTTTCTATCGAAA+AGG | - | chr2_2:22642041-22642060 | Msa0244380:intron | 25.0% |
!!! | CTGTATTCTTTTTTAGATCA+CGG | - | chr2_2:22642084-22642103 | Msa0244380:intron | 25.0% |
!! | CGATTAATTAGAGTATCTTT+AGG | - | chr2_2:22642323-22642342 | Msa0244380:CDS | 25.0% |
! | CAGAGCTAACTAATTAAAAT+TGG | - | chr2_2:22642473-22642492 | Msa0244380:intron | 25.0% |
!! | AAAATTGGCTTCAAAATGAA+CGG | - | chr2_2:22642488-22642507 | Msa0244380:intron | 25.0% |
! | AAATAGTAAGTACATACTTG+TGG | + | chr2_2:22642810-22642829 | None:intergenic | 25.0% |
!!! | AAAGTCAGAGTTTAAGTTTT+AGG | + | chr2_2:22642900-22642919 | None:intergenic | 25.0% |
! | TAAGCTAGGATTTATATTTG+TGG | + | chr2_2:22642935-22642954 | None:intergenic | 25.0% |
!!! | ATCGAATTTAATTTTCTCAC+AGG | + | chr2_2:22642965-22642984 | None:intergenic | 25.0% |
!! | TATCTAATATGTTGACTACT+TGG | + | chr2_2:22643163-22643182 | None:intergenic | 25.0% |
! | GTTAACAACAATGTTAATTG+AGG | - | chr2_2:22643203-22643222 | Msa0244380:intron | 25.0% |
! | TATGTGCATACAAGTTATTA+TGG | - | chr2_2:22643341-22643360 | Msa0244380:intron | 25.0% |
! | AGTTTAATGTTGTGATTTAG+AGG | + | chr2_2:22643380-22643399 | None:intergenic | 25.0% |
!! | AAATTATTTGTTGGAAAAGG+AGG | + | chr2_2:22643897-22643916 | None:intergenic | 25.0% |
!! | CTCAAATTATTTGTTGGAAA+AGG | + | chr2_2:22643900-22643919 | None:intergenic | 25.0% |
! | GAAGATATTAAAGTTAAACC+AGG | + | chr2_2:22644032-22644051 | None:intergenic | 25.0% |
! | CAGCTGAATTTATAATAGAA+AGG | - | chr2_2:22644476-22644495 | Msa0244380:intron | 25.0% |
!!! | TTTGTTTTTTGTATAGCTCA+AGG | - | chr2_2:22644590-22644609 | Msa0244380:intron | 25.0% |
!!! | TTGTTTTTTGTATAGCTCAA+GGG | - | chr2_2:22644591-22644610 | Msa0244380:intron | 25.0% |
!! | AAATTTGTAGCTTGCAAATT+CGG | - | chr2_2:22644946-22644965 | Msa0244380:intron | 25.0% |
! | TAAAAGCAAGAAACATATGT+AGG | + | chr2_2:22645067-22645086 | None:intergenic | 25.0% |
!! | TACTTTCTAAAAATTGGTTG+TGG | - | chr2_2:22645121-22645140 | Msa0244380:CDS | 25.0% |
! | TAACCTGAAACTAAATAGAA+GGG | + | chr2_2:22645318-22645337 | None:intergenic | 25.0% |
! | TTAACCTGAAACTAAATAGA+AGG | + | chr2_2:22645319-22645338 | None:intergenic | 25.0% |
! | TCAATATTTCACATAACAAG+CGG | + | chr2_2:22645445-22645464 | None:intergenic | 25.0% |
! | ACAATATATAGTTCCTGAAA+AGG | - | chr2_2:22645466-22645485 | Msa0244380:intron | 25.0% |
!! | AAAAAATGAAAAGCCTTTTC+AGG | + | chr2_2:22645482-22645501 | None:intergenic | 25.0% |
! | TTTGGTATGAATTCATCAAT+AGG | + | chr2_2:22645528-22645547 | None:intergenic | 25.0% |
! | CTATACTTATTCTGTAATAG+GGG | - | chr2_2:22645696-22645715 | Msa0244380:intron | 25.0% |
!!! | TTCACAGGTTTTTTTTTTTG+AGG | - | chr2_2:22645917-22645936 | Msa0244380:intron | 25.0% |
! | ATCATTTCAAGAAAAAGAGA+AGG | + | chr2_2:22645980-22645999 | None:intergenic | 25.0% |
!! | TCTCTTTTTCTTGAAATGAT+AGG | - | chr2_2:22645980-22645999 | Msa0244380:intron | 25.0% |
! | TCATTGATCATGAAAAAAAG+AGG | - | chr2_2:22646042-22646061 | Msa0244380:intron | 25.0% |
! | ACAACTTTACAGGAAAATAT+TGG | + | chr2_2:22646254-22646273 | None:intergenic | 25.0% |
! | AGTATATCTTACAACTTTAC+AGG | + | chr2_2:22646264-22646283 | None:intergenic | 25.0% |
!!! | TTGTAATACAGTAGTCTTAT+GGG | - | chr2_2:22646412-22646431 | Msa0244380:intron | 25.0% |
! | TTAATTTCATACTTGAGTGT+AGG | + | chr2_2:22646483-22646502 | None:intergenic | 25.0% |
! | TCTAAGTTATCAAATTTGAG+TGG | - | chr2_2:22646548-22646567 | Msa0244380:intron | 25.0% |
!!! | ATTTTTTTTTACTAGTGGTG+TGG | - | chr2_2:22646593-22646612 | Msa0244380:intron | 25.0% |
! | TTGTATCAAAAACTAAAGGT+AGG | + | chr2_2:22646948-22646967 | None:intergenic | 25.0% |
!! | TTTAAAAGCACATAATTGTC+TGG | + | chr2_2:22647134-22647153 | None:intergenic | 25.0% |
!! | TCATTAGAGTATCAAGATAT+GGG | + | chr2_2:22647165-22647184 | None:intergenic | 25.0% |
!! | ATCATTAGAGTATCAAGATA+TGG | + | chr2_2:22647166-22647185 | None:intergenic | 25.0% |
! | AAGACCAGAAAAAAAAAAAG+AGG | + | chr2_2:22647214-22647233 | None:intergenic | 25.0% |
!! | AGATTAGCCAGATATTTAAA+TGG | + | chr2_2:22647265-22647284 | None:intergenic | 25.0% |
! | TTGAAAATCTGTTGAATTGT+AGG | + | chr2_2:22647543-22647562 | None:intergenic | 25.0% |
! | TACTAAGTGAATGATTCAAA+AGG | + | chr2_2:22647598-22647617 | None:intergenic | 25.0% |
!! | GAATCATTCACTTAGTATTT+TGG | - | chr2_2:22647601-22647620 | Msa0244380:five_prime_UTR | 25.0% |
!! | TAATCATAAAGTATTCTCCA+AGG | + | chr2_2:22647683-22647702 | None:intergenic | 25.0% |
! | AGGTTGTGTCAAATATTTAT+GGG | - | chr2_2:22647736-22647755 | Msa0244380:five_prime_UTR | 25.0% |
! | AATAAAAAGGTAAAGAAGTG+GGG | + | chr2_2:22647788-22647807 | None:intergenic | 25.0% |
AATTATTCTAGATTCCGATC+TGG | - | chr2_2:22641618-22641637 | Msa0244380:three_prime_UTR | 30.0% | |
!!! | ATTGCTTTTTCTCAGTAGTA+AGG | - | chr2_2:22641888-22641907 | Msa0244380:intron | 30.0% |
! | TTACGAAACTGTGTTTGTTT+TGG | - | chr2_2:22641926-22641945 | Msa0244380:intron | 30.0% |
!!! | GTTTTGGTTGATTTTAGTGT+TGG | - | chr2_2:22641942-22641961 | Msa0244380:intron | 30.0% |
CGAAAAATCTTCTATCGAAA+AGG | - | chr2_2:22641999-22642018 | Msa0244380:intron | 30.0% | |
TACATACAATGCTTCATTGT+CGG | + | chr2_2:22642406-22642425 | None:intergenic | 30.0% | |
!! | CAATGAAGCATTGTATGTAT+CGG | - | chr2_2:22642407-22642426 | Msa0244380:intron | 30.0% |
! | AAATTGGCTTCAAAATGAAC+GGG | - | chr2_2:22642489-22642508 | Msa0244380:intron | 30.0% |
CAAAACATTTACCCTTAATC+CGG | + | chr2_2:22642589-22642608 | None:intergenic | 30.0% | |
GATGCAACAAAATCAAATCA+AGG | + | chr2_2:22643052-22643071 | None:intergenic | 30.0% | |
TTGTTAACTACTCTAAGTAG+AGG | + | chr2_2:22643191-22643210 | None:intergenic | 30.0% | |
! | TAGAATTGTTGCTTCTAGAT+TGG | + | chr2_2:22643443-22643462 | None:intergenic | 30.0% |
AGCAACAATTCTAGATATCT+AGG | - | chr2_2:22643450-22643469 | Msa0244380:intron | 30.0% | |
GATGAAATTACTGAAAACAG+AGG | - | chr2_2:22643520-22643539 | Msa0244380:intron | 30.0% | |
!! | TATTGGTTTCGTTGTTTCTT+GGG | + | chr2_2:22643661-22643680 | None:intergenic | 30.0% |
ATAACAACAAACACAAGTTC+TGG | + | chr2_2:22643753-22643772 | None:intergenic | 30.0% | |
GCTTTGCTCAAATTATTTGT+TGG | + | chr2_2:22643906-22643925 | None:intergenic | 30.0% | |
TAAGCAAATGTGAACGAAAA+TGG | + | chr2_2:22644218-22644237 | None:intergenic | 30.0% | |
!! | ATTTTTCGGTATCAGACATA+AGG | - | chr2_2:22644246-22644265 | Msa0244380:intron | 30.0% |
! | TTTTGTCTGTTTTGTAACCA+TGG | - | chr2_2:22644365-22644384 | Msa0244380:intron | 30.0% |
! | GGTTTAGTTGTTGTATCTTT+TGG | - | chr2_2:22644658-22644677 | Msa0244380:intron | 30.0% |
TGAACTTACAAAAACAAGTG+TGG | - | chr2_2:22644833-22644852 | Msa0244380:CDS | 30.0% | |
TTTGAATCAGAAGTAAGTCT+GGG | - | chr2_2:22645288-22645307 | Msa0244380:intron | 30.0% | |
! | TTTCCCTTCTATTTAGTTTC+AGG | - | chr2_2:22645312-22645331 | Msa0244380:intron | 30.0% |
!!! | TTAAGAGATGCTGGTTTTAT+AGG | - | chr2_2:22645335-22645354 | Msa0244380:intron | 30.0% |
GTTTCATTCAGATATAGGTT+GGG | + | chr2_2:22645788-22645807 | None:intergenic | 30.0% | |
TGTTTCATTCAGATATAGGT+TGG | + | chr2_2:22645789-22645808 | None:intergenic | 30.0% | |
GACATGTTTCATTCAGATAT+AGG | + | chr2_2:22645793-22645812 | None:intergenic | 30.0% | |
!! | TTTTTGAGGAAATGTTTCAC+AGG | - | chr2_2:22645931-22645950 | Msa0244380:intron | 30.0% |
!!! | ATGTTTCACAGGTTTTTTGT+TGG | - | chr2_2:22645942-22645961 | Msa0244380:intron | 30.0% |
TCAATGATTGCAATCTTTGT+AGG | + | chr2_2:22646029-22646048 | None:intergenic | 30.0% | |
!!! | ACATTTGTTTTGCGTAAAGA+TGG | - | chr2_2:22646065-22646084 | Msa0244380:intron | 30.0% |
TTACAGGAAAATATTGGACA+TGG | + | chr2_2:22646248-22646267 | None:intergenic | 30.0% | |
TACTACCAAGTAACAATACA+AGG | - | chr2_2:22646280-22646299 | Msa0244380:intron | 30.0% | |
ACTTTCCTTGTATTGTTACT+TGG | + | chr2_2:22646288-22646307 | None:intergenic | 30.0% | |
! | GTTGTAATACAGTAGTCTTA+TGG | - | chr2_2:22646411-22646430 | Msa0244380:intron | 30.0% |
AGGTAGGATAATGTAAGTAA+AGG | + | chr2_2:22646932-22646951 | None:intergenic | 30.0% | |
!! | TATTTTAAGCATAACAGAGC+AGG | - | chr2_2:22647009-22647028 | Msa0244380:intron | 30.0% |
TGATACTCTAATGATCTGAT+TGG | - | chr2_2:22647171-22647190 | Msa0244380:intron | 30.0% | |
!!! | GGAACCTCTTTTTTTTTTTC+TGG | - | chr2_2:22647207-22647226 | Msa0244380:intron | 30.0% |
! | CTTTTGAATGATTTATCTGC+AGG | - | chr2_2:22647283-22647302 | Msa0244380:intron | 30.0% |
! | TTGCAAAGTTAATGGATGAA+AGG | - | chr2_2:22647313-22647332 | Msa0244380:intron | 30.0% |
TTGGAAAGATGAATTCATGT+TGG | - | chr2_2:22647377-22647396 | Msa0244380:intron | 30.0% | |
! | AAGATGAATTCATGTTGGTT+AGG | - | chr2_2:22647382-22647401 | Msa0244380:intron | 30.0% |
!!! | TTTTTTCTTCCTCCCTATAA+TGG | - | chr2_2:22647431-22647450 | Msa0244380:intron | 30.0% |
CACATTAGTCATCCATTATA+GGG | + | chr2_2:22647446-22647465 | None:intergenic | 30.0% | |
!!! | GCAGTAATTTTGTTTTTCCA+TGG | + | chr2_2:22647521-22647540 | None:intergenic | 30.0% |
!!! | GATTTTCAAGTTGAGTTGAA+TGG | - | chr2_2:22647554-22647573 | Msa0244380:CDS | 30.0% |
CAGGTTGTGTCAAATATTTA+TGG | - | chr2_2:22647735-22647754 | Msa0244380:five_prime_UTR | 30.0% | |
TATGAATTTCTCGGGTTCTT+TGG | + | chr2_2:22641239-22641258 | None:intergenic | 35.0% | |
! | AAAGTGTTTAGTGTCGTTGT+TGG | + | chr2_2:22641282-22641301 | None:intergenic | 35.0% |
TCTTCCTTTACGTTAACCAA+AGG | - | chr2_2:22641456-22641475 | Msa0244380:three_prime_UTR | 35.0% | |
GATACCTTTGGTTAACGTAA+AGG | + | chr2_2:22641463-22641482 | None:intergenic | 35.0% | |
!! | ACGTTAACCAAAGGTATCAA+TGG | - | chr2_2:22641465-22641484 | Msa0244380:three_prime_UTR | 35.0% |
CGAAATATACCTAACCAGAT+CGG | + | chr2_2:22641635-22641654 | None:intergenic | 35.0% | |
TGACTGTGAAATTTAGAAGG+AGG | - | chr2_2:22641744-22641763 | Msa0244380:intron | 35.0% | |
TAGAAGGAGGAAGAAGAAAA+AGG | - | chr2_2:22641757-22641776 | Msa0244380:intron | 35.0% | |
TTGTAGATTTATCTGTACGG+TGG | - | chr2_2:22641829-22641848 | Msa0244380:intron | 35.0% | |
! | AGATTTTTCGCCAACAAACT+CGG | + | chr2_2:22641989-22642008 | None:intergenic | 35.0% |
!! | TAGATCACGGTTCTAAATTG+TGG | - | chr2_2:22642097-22642116 | Msa0244380:intron | 35.0% |
ACCCATGATATCAAAGTTCA+CGG | + | chr2_2:22642123-22642142 | None:intergenic | 35.0% | |
GGTCTACAACTACAACATAA+AGG | + | chr2_2:22642200-22642219 | None:intergenic | 35.0% | |
! | ACACATTCCATTAGAAGTGT+CGG | - | chr2_2:22642445-22642464 | Msa0244380:intron | 35.0% |
CATCTAATCAACATGAAAGC+TGG | + | chr2_2:22642686-22642705 | None:intergenic | 35.0% | |
TATTATCTTGTTCCTTGTGC+AGG | - | chr2_2:22642734-22642753 | Msa0244380:intron | 35.0% | |
! | CATACTTGTGGAAAGCATAT+TGG | + | chr2_2:22642798-22642817 | None:intergenic | 35.0% |
TCACAGGAATGTAATAAGCT+AGG | + | chr2_2:22642949-22642968 | None:intergenic | 35.0% | |
AGCATAAGTCGTATTGAAGA+AGG | - | chr2_2:22642985-22643004 | Msa0244380:CDS | 35.0% | |
GCATAAGTCGTATTGAAGAA+GGG | - | chr2_2:22642986-22643005 | Msa0244380:intron | 35.0% | |
CATAAGTCGTATTGAAGAAG+GGG | - | chr2_2:22642987-22643006 | Msa0244380:intron | 35.0% | |
AATATGCCCAGTTCTCAAAA+CGG | + | chr2_2:22643105-22643124 | None:intergenic | 35.0% | |
ATTGAGGGTCTATGTAAGAT+TGG | - | chr2_2:22643219-22643238 | Msa0244380:intron | 35.0% | |
TTGAGGGTCTATGTAAGATT+GGG | - | chr2_2:22643220-22643239 | Msa0244380:intron | 35.0% | |
!! | CTATTGGTTTCGTTGTTTCT+TGG | + | chr2_2:22643662-22643681 | None:intergenic | 35.0% |
TATTTGCAGTTTGCAAACCA+TGG | - | chr2_2:22643813-22643832 | Msa0244380:intron | 35.0% | |
!! | CACATGGATTTGCTAGAAAT+CGG | - | chr2_2:22643847-22643866 | Msa0244380:intron | 35.0% |
!! | ACATGGATTTGCTAGAAATC+GGG | - | chr2_2:22643848-22643867 | Msa0244380:intron | 35.0% |
! | ATTTGCTAGAAATCGGGTTT+GGG | - | chr2_2:22643854-22643873 | Msa0244380:intron | 35.0% |
! | TATTTGTTGGAAAAGGAGGA+GGG | + | chr2_2:22643893-22643912 | None:intergenic | 35.0% |
! | TTATTTGTTGGAAAAGGAGG+AGG | + | chr2_2:22643894-22643913 | None:intergenic | 35.0% |
ATCTTCATGTCTTCTTCAGA+GGG | + | chr2_2:22643951-22643970 | None:intergenic | 35.0% | |
TGATGTTGACATCTCGAATT+CGG | - | chr2_2:22644171-22644190 | Msa0244380:intron | 35.0% | |
!!! | CATCGCTGTTTAGTTTTAAC+TGG | - | chr2_2:22644302-22644321 | Msa0244380:intron | 35.0% |
! | TCTGTTTTGTAACCATGGTT+AGG | - | chr2_2:22644370-22644389 | Msa0244380:intron | 35.0% |
AAGTGAGGTTTGACCAAATA+AGG | + | chr2_2:22644628-22644647 | None:intergenic | 35.0% | |
AAACCTCACTTAGTCTGATA+AGG | - | chr2_2:22644637-22644656 | Msa0244380:intron | 35.0% | |
AAACCTTATCAGACTAAGTG+AGG | + | chr2_2:22644643-22644662 | None:intergenic | 35.0% | |
! | TGGTTGAAATCTAGTTCAAG+AGG | - | chr2_2:22644678-22644697 | Msa0244380:intron | 35.0% |
GTACTGAACTATGCTATGAT+TGG | - | chr2_2:22644704-22644723 | Msa0244380:intron | 35.0% | |
CTATGCTATGATTGGCAATT+TGG | - | chr2_2:22644712-22644731 | Msa0244380:intron | 35.0% | |
!! | TCATTTACTTTTCCCTCATG+TGG | - | chr2_2:22644764-22644783 | Msa0244380:CDS | 35.0% |
!! | CATTTACTTTTCCCTCATGT+GGG | - | chr2_2:22644765-22644784 | Msa0244380:CDS | 35.0% |
GTTGTGTCAAATCTGAAAGT+TGG | - | chr2_2:22644807-22644826 | Msa0244380:CDS | 35.0% | |
! | GTGTGGATTTTTGTACATGA+TGG | - | chr2_2:22644850-22644869 | Msa0244380:CDS | 35.0% |
TTATTTCCCAACTCAGTTAG+TGG | - | chr2_2:22645020-22645039 | Msa0244380:intron | 35.0% | |
TTAACTCCACTAACTGAGTT+GGG | + | chr2_2:22645029-22645048 | None:intergenic | 35.0% | |
TTTAACTCCACTAACTGAGT+TGG | + | chr2_2:22645030-22645049 | None:intergenic | 35.0% | |
CAAGTTGTCAAGATAATCCA+AGG | + | chr2_2:22645226-22645245 | None:intergenic | 35.0% | |
CAGACTTACTTCTGATTCAA+AGG | + | chr2_2:22645289-22645308 | None:intergenic | 35.0% | |
CTTTGAATCAGAAGTAAGTC+TGG | - | chr2_2:22645287-22645306 | Msa0244380:intron | 35.0% | |
ATATAAGCAAGAAAACGCAG+AGG | + | chr2_2:22645643-22645662 | None:intergenic | 35.0% | |
ACTTATTCTGTAATAGGGGT+AGG | - | chr2_2:22645700-22645719 | Msa0244380:intron | 35.0% | |
CTAAAAACAGAGTTTCTGCA+AGG | + | chr2_2:22646317-22646336 | None:intergenic | 35.0% | |
!! | AAAGGTATTCAAGTGAGACT+TGG | + | chr2_2:22646356-22646375 | None:intergenic | 35.0% |
ATACCTTTGAATGCCTTGAT+TGG | - | chr2_2:22646368-22646387 | Msa0244380:intron | 35.0% | |
TACCTTTGAATGCCTTGATT+GGG | - | chr2_2:22646369-22646388 | Msa0244380:intron | 35.0% | |
TATCAAATTTGAGTGGCTGT+TGG | - | chr2_2:22646555-22646574 | Msa0244380:intron | 35.0% | |
GGATAAGAAAGCAAAGTCTA+TGG | - | chr2_2:22646624-22646643 | Msa0244380:intron | 35.0% | |
TAAGCATATGCTTTGTGTAG+AGG | - | chr2_2:22646669-22646688 | Msa0244380:intron | 35.0% | |
AGAGGCTGCTAATATTGAAA+AGG | - | chr2_2:22646687-22646706 | Msa0244380:intron | 35.0% | |
TTCCATCTAGTTACTGTAGT+GGG | - | chr2_2:22646764-22646783 | Msa0244380:intron | 35.0% | |
TTTGCAGTATTTACCTGTAC+AGG | + | chr2_2:22646849-22646868 | None:intergenic | 35.0% | |
!! | GTAGCTTGTTGCAAAGTTAA+TGG | - | chr2_2:22647305-22647324 | Msa0244380:intron | 35.0% |
ATTCATCTTTCCAACACAGA+TGG | + | chr2_2:22647371-22647390 | None:intergenic | 35.0% | |
ATTAGTCATCCATTATAGGG+AGG | + | chr2_2:22647443-22647462 | None:intergenic | 35.0% | |
CCACATTAGTCATCCATTAT+AGG | + | chr2_2:22647447-22647466 | None:intergenic | 35.0% | |
!! | CCTATAATGGATGACTAATG+TGG | - | chr2_2:22647444-22647463 | Msa0244380:intron | 35.0% |
! | TTTTTCCATGGCAAGAAATG+TGG | + | chr2_2:22647509-22647528 | None:intergenic | 35.0% |
TTGGGTAATTACTACATCCT+TGG | - | chr2_2:22647663-22647682 | Msa0244380:five_prime_UTR | 35.0% | |
ACCCGAGAAATTCATACACA+CGG | - | chr2_2:22641243-22641262 | Msa0244380:three_prime_UTR | 40.0% | |
CCTAACAGTTGAAGCTCTAT+AGG | + | chr2_2:22641374-22641393 | None:intergenic | 40.0% | |
CCTATAGAGCTTCAACTGTT+AGG | - | chr2_2:22641371-22641390 | Msa0244380:three_prime_UTR | 40.0% | |
ATCGAGACCATTGATACCTT+TGG | + | chr2_2:22641475-22641494 | None:intergenic | 40.0% | |
AGGTATCAATGGTCTCGATA+AGG | - | chr2_2:22641476-22641495 | Msa0244380:three_prime_UTR | 40.0% | |
TTCTAGATTCCGATCTGGTT+AGG | - | chr2_2:22641623-22641642 | Msa0244380:three_prime_UTR | 40.0% | |
AGTTTAGTTGCCGAGTTTGT+TGG | - | chr2_2:22641976-22641995 | Msa0244380:intron | 40.0% | |
GCCGTGAACTTTGATATCAT+GGG | - | chr2_2:22642119-22642138 | Msa0244380:intron | 40.0% | |
TACAATGCTTCATTGTCGGT+TGG | + | chr2_2:22642402-22642421 | None:intergenic | 40.0% | |
CTTCTAATGGAATGTGTGTC+CGG | + | chr2_2:22642442-22642461 | None:intergenic | 40.0% | |
TGTAGAACCGACACTTCTAA+TGG | + | chr2_2:22642455-22642474 | None:intergenic | 40.0% | |
TGCTTCAATGGCAGTTAATC+CGG | - | chr2_2:22642567-22642586 | Msa0244380:intron | 40.0% | |
ATGGCAGTTAATCCGGATTA+AGG | - | chr2_2:22642574-22642593 | Msa0244380:intron | 40.0% | |
TGGCAGTTAATCCGGATTAA+GGG | - | chr2_2:22642575-22642594 | Msa0244380:intron | 40.0% | |
CTAATCAACATGAAAGCTGG+AGG | + | chr2_2:22642683-22642702 | None:intergenic | 40.0% | |
! | CTGTTTTCCTTAGAGATGAG+AGG | - | chr2_2:22642865-22642884 | Msa0244380:intron | 40.0% |
GGTTGAAAGATTGAAACTCG+AGG | - | chr2_2:22643247-22643266 | Msa0244380:intron | 40.0% | |
ATCGTAAGATCCTACCAACA+GGG | - | chr2_2:22643282-22643301 | Msa0244380:intron | 40.0% | |
!!! | TACACTTTTTCCCTGTTGGT+AGG | + | chr2_2:22643295-22643314 | None:intergenic | 40.0% |
!!! | CACATACACTTTTTCCCTGT+TGG | + | chr2_2:22643299-22643318 | None:intergenic | 40.0% |
GAGGATGAAGACGACTATAT+TGG | + | chr2_2:22643483-22643502 | None:intergenic | 40.0% | |
TATAGTCGTCTTCATCCTCA+TGG | - | chr2_2:22643484-22643503 | Msa0244380:intron | 40.0% | |
TTATCTTGGTTTCCTCTGTG+CGG | + | chr2_2:22643556-22643575 | None:intergenic | 40.0% | |
AGACAGCAGTGAAATCTAGA+AGG | + | chr2_2:22643604-22643623 | None:intergenic | 40.0% | |
ATTTCCATCACCATGTCATC+TGG | + | chr2_2:22643785-22643804 | None:intergenic | 40.0% | |
GTTTGCAAACCATGGAAACT+TGG | - | chr2_2:22643821-22643840 | Msa0244380:intron | 40.0% | |
CATGTGATTCCAAGTTTCCA+TGG | + | chr2_2:22643833-22643852 | None:intergenic | 40.0% | |
CATGGAAACTTGGAATCACA+TGG | - | chr2_2:22643831-22643850 | Msa0244380:intron | 40.0% | |
!! | GATTTGCTAGAAATCGGGTT+TGG | - | chr2_2:22643853-22643872 | Msa0244380:intron | 40.0% |
GATCTTCATGTCTTCTTCAG+AGG | + | chr2_2:22643952-22643971 | None:intergenic | 40.0% | |
CTGAAGAAGACATGAAGATC+TGG | - | chr2_2:22643952-22643971 | Msa0244380:intron | 40.0% | |
! | ACATGAAGATCTGGAATCAC+AGG | - | chr2_2:22643961-22643980 | Msa0244380:intron | 40.0% |
!!! | TAGTTTTGAGTACCGTCTGA+GGG | - | chr2_2:22644124-22644143 | Msa0244380:intron | 40.0% |
TGTCAACATCAAATCTCCTC+CGG | + | chr2_2:22644162-22644181 | None:intergenic | 40.0% | |
ATTCGGAACACAAACAGTGA+TGG | - | chr2_2:22644188-22644207 | Msa0244380:intron | 40.0% | |
TTCGGAACACAAACAGTGAT+GGG | - | chr2_2:22644189-22644208 | Msa0244380:intron | 40.0% | |
!! | TATTGCCGGGGCTTTTAATT+TGG | - | chr2_2:22644511-22644530 | Msa0244380:intron | 40.0% |
!! | TATAGCTCAAGGGCTTTAAG+TGG | - | chr2_2:22644601-22644620 | Msa0244380:intron | 40.0% |
!! | GGCTTTAAGTGGTCCTTATT+TGG | - | chr2_2:22644612-22644631 | Msa0244380:intron | 40.0% |
GTTAGTGGAGTTAAAGACTG+TGG | - | chr2_2:22645035-22645054 | Msa0244380:CDS | 40.0% | |
TGCATGTGTTCAGTGAAGTT+CGG | - | chr2_2:22645184-22645203 | Msa0244380:intron | 40.0% | |
TCTTGACAACTTGCAGAACA+AGG | - | chr2_2:22645233-22645252 | Msa0244380:intron | 40.0% | |
!! | AGTTTCAGGTTAAGAGATGC+TGG | - | chr2_2:22645326-22645345 | Msa0244380:intron | 40.0% |
! | TTCATACCAAAAGTGTGCAC+TGG | - | chr2_2:22645537-22645556 | Msa0244380:intron | 40.0% |
GTGTGTAGCTAATGTTTCAC+AGG | - | chr2_2:22645902-22645921 | Msa0244380:intron | 40.0% | |
ACCTTTGAATGCCTTGATTG+GGG | - | chr2_2:22646370-22646389 | Msa0244380:intron | 40.0% | |
GACTTTGCTTTCTTATCCCA+AGG | + | chr2_2:22646622-22646641 | None:intergenic | 40.0% | |
! | GCAAAGTCTATGGCTGATTT+CGG | - | chr2_2:22646634-22646653 | Msa0244380:intron | 40.0% |
! | CAAAGTCTATGGCTGATTTC+GGG | - | chr2_2:22646635-22646654 | Msa0244380:intron | 40.0% |
! | AAAGTCTATGGCTGATTTCG+GGG | - | chr2_2:22646636-22646655 | Msa0244380:intron | 40.0% |
!! | AAGGCTATCACTTTGAAACC+TGG | - | chr2_2:22646706-22646725 | Msa0244380:intron | 40.0% |
!! | CTTTGAAACCTGGAGAAGAA+TGG | - | chr2_2:22646716-22646735 | Msa0244380:intron | 40.0% |
AAACCTGGAGAAGAATGGAA+AGG | - | chr2_2:22646721-22646740 | Msa0244380:intron | 40.0% | |
GTTCCATCTAGTTACTGTAG+TGG | - | chr2_2:22646763-22646782 | Msa0244380:intron | 40.0% | |
GATTCAAAAGGAATCCCTCT+GGG | + | chr2_2:22647586-22647605 | None:intergenic | 40.0% | |
TGATTCAAAAGGAATCCCTC+TGG | + | chr2_2:22647587-22647606 | None:intergenic | 40.0% | |
CTCTGTGTGTGTGTGAAATG+GGG | + | chr2_2:22641213-22641232 | None:intergenic | 45.0% | |
CCTCTGTGTGTGTGTGAAAT+GGG | + | chr2_2:22641214-22641233 | None:intergenic | 45.0% | |
TCCTCTGTGTGTGTGTGAAA+TGG | + | chr2_2:22641215-22641234 | None:intergenic | 45.0% | |
GCCGTGTGTATGAATTTCTC+GGG | + | chr2_2:22641247-22641266 | None:intergenic | 45.0% | |
CGCCGTGTGTATGAATTTCT+CGG | + | chr2_2:22641248-22641267 | None:intergenic | 45.0% | |
CGAGAAATTCATACACACGG+CGG | - | chr2_2:22641246-22641265 | Msa0244380:three_prime_UTR | 45.0% | |
GTTCTTCTTCGTGAATCTCG+TGG | - | chr2_2:22641498-22641517 | Msa0244380:three_prime_UTR | 45.0% | |
CGGTTACGATTATACCTCAG+CGG | + | chr2_2:22641529-22641548 | None:intergenic | 45.0% | |
GTGGAAGAATGATCATGCTG+AGG | - | chr2_2:22641864-22641883 | Msa0244380:intron | 45.0% | |
GGCCGTGAACTTTGATATCA+TGG | - | chr2_2:22642118-22642137 | Msa0244380:intron | 45.0% | |
!! | TATGTATCGGTGTCAAACGC+CGG | - | chr2_2:22642420-22642439 | Msa0244380:intron | 45.0% |
GCTTAAAGATAGCCTGCACA+AGG | + | chr2_2:22642749-22642768 | None:intergenic | 45.0% | |
GGCTATCTTTAAGCCTCCTA+AGG | - | chr2_2:22642755-22642774 | Msa0244380:intron | 45.0% | |
CCTTTCACCTCTCATCTCTA+AGG | + | chr2_2:22642875-22642894 | None:intergenic | 45.0% | |
CCTTAGAGATGAGAGGTGAA+AGG | - | chr2_2:22642872-22642891 | Msa0244380:intron | 45.0% | |
AAGTCGTATTGAAGAAGGGG+TGG | - | chr2_2:22642990-22643009 | Msa0244380:intron | 45.0% | |
AGTCGTATTGAAGAAGGGGT+GGG | - | chr2_2:22642991-22643010 | Msa0244380:intron | 45.0% | |
AGTGAGCTGCTCTCTTTGTA+GGG | + | chr2_2:22643081-22643100 | None:intergenic | 45.0% | |
!!! | TCACTGCCGTTTTGAGAACT+GGG | - | chr2_2:22643096-22643115 | Msa0244380:intron | 45.0% |
AGGGTCTATGTAAGATTGGG+AGG | - | chr2_2:22643223-22643242 | Msa0244380:intron | 45.0% | |
GGGTCTATGTAAGATTGGGA+GGG | - | chr2_2:22643224-22643243 | Msa0244380:intron | 45.0% | |
GGTCTATGTAAGATTGGGAG+GGG | - | chr2_2:22643225-22643244 | Msa0244380:intron | 45.0% | |
GTCTATGTAAGATTGGGAGG+GGG | - | chr2_2:22643226-22643245 | Msa0244380:intron | 45.0% | |
GAAACTCGAGGATTGTAGCA+CGG | - | chr2_2:22643259-22643278 | Msa0244380:intron | 45.0% | |
GATCGTAAGATCCTACCAAC+AGG | - | chr2_2:22643281-22643300 | Msa0244380:intron | 45.0% | |
TCCTCATGGAAGTGAAACAG+AGG | - | chr2_2:22643498-22643517 | Msa0244380:intron | 45.0% | |
TCCTCTGTTTCACTTCCATG+AGG | + | chr2_2:22643502-22643521 | None:intergenic | 45.0% | |
TCATCACACTCCAGATGACA+TGG | - | chr2_2:22643772-22643791 | Msa0244380:CDS | 45.0% | |
!!! | GTAGTTTTGAGTACCGTCTG+AGG | - | chr2_2:22644123-22644142 | Msa0244380:intron | 45.0% |
GTCAACATCAAATCTCCTCC+GGG | + | chr2_2:22644161-22644180 | None:intergenic | 45.0% | |
TGGTGAAAGTAGCCTAACCA+TGG | + | chr2_2:22644385-22644404 | None:intergenic | 45.0% | |
! | GGACCTCAAAGCATTATTGC+CGG | - | chr2_2:22644497-22644516 | Msa0244380:intron | 45.0% |
! | GACCTCAAAGCATTATTGCC+GGG | - | chr2_2:22644498-22644517 | Msa0244380:intron | 45.0% |
! | ACCTCAAAGCATTATTGCCG+GGG | - | chr2_2:22644499-22644518 | Msa0244380:intron | 45.0% |
TGCCACCAAATTAAAAGCCC+CGG | + | chr2_2:22644519-22644538 | None:intergenic | 45.0% | |
!!! | GGGCTTTTAATTTGGTGGCA+CGG | - | chr2_2:22644519-22644538 | Msa0244380:intron | 45.0% |
!!! | GGCTTTTAATTTGGTGGCAC+GGG | - | chr2_2:22644520-22644539 | Msa0244380:intron | 45.0% |
AAGTACAACTGCCCACATGA+GGG | + | chr2_2:22644779-22644798 | None:intergenic | 45.0% | |
GCATGTGTTCAGTGAAGTTC+GGG | - | chr2_2:22645185-22645204 | Msa0244380:intron | 45.0% | |
TTCAGTGAAGTTCGGGTAGA+AGG | - | chr2_2:22645192-22645211 | Msa0244380:intron | 45.0% | |
GGTAGAAGGATTAGAGACCT+TGG | - | chr2_2:22645206-22645225 | Msa0244380:intron | 45.0% | |
!! | AAGGAGCGCTTTACTGAACA+GGG | - | chr2_2:22645252-22645271 | Msa0244380:intron | 45.0% |
! | TAGCAACCAGTGCACACTTT+TGG | + | chr2_2:22645546-22645565 | None:intergenic | 45.0% |
AAAGATAAAGCCGACAGTGG+GGG | + | chr2_2:22645620-22645639 | None:intergenic | 45.0% | |
GAAAGATAAAGCCGACAGTG+GGG | + | chr2_2:22645621-22645640 | None:intergenic | 45.0% | |
GGAAAGATAAAGCCGACAGT+GGG | + | chr2_2:22645622-22645641 | None:intergenic | 45.0% | |
AGGAAAGATAAAGCCGACAG+TGG | + | chr2_2:22645623-22645642 | None:intergenic | 45.0% | |
GGTATCAACCAGCGCATATT+GGG | + | chr2_2:22645731-22645750 | None:intergenic | 45.0% | |
TGGTATCAACCAGCGCATAT+TGG | + | chr2_2:22645732-22645751 | None:intergenic | 45.0% | |
ATGCCACCCACTTCATATCT+GGG | - | chr2_2:22645751-22645770 | Msa0244380:intron | 45.0% | |
CCAATGCCCAGATATGAAGT+GGG | + | chr2_2:22645760-22645779 | None:intergenic | 45.0% | |
ACCAATGCCCAGATATGAAG+TGG | + | chr2_2:22645761-22645780 | None:intergenic | 45.0% | |
!! | AGATAGTACTGACCAGCATC+AGG | + | chr2_2:22646095-22646114 | None:intergenic | 45.0% |
! | TCCCCAATCAAGGCATTCAA+AGG | + | chr2_2:22646374-22646393 | None:intergenic | 45.0% |
TACTAGTGGTGTGGAATCCT+TGG | - | chr2_2:22646602-22646621 | Msa0244380:intron | 45.0% | |
ACTAGTGGTGTGGAATCCTT+GGG | - | chr2_2:22646603-22646622 | Msa0244380:intron | 45.0% | |
CTTCCTTTCCATTCTTCTCC+AGG | + | chr2_2:22646727-22646746 | None:intergenic | 45.0% | |
TGCCCACTACAGTAACTAGA+TGG | + | chr2_2:22646769-22646788 | None:intergenic | 45.0% | |
CATGCAGGGGCAAAATTACA+GGG | + | chr2_2:22647346-22647365 | None:intergenic | 45.0% | |
ACATGCAGGGGCAAAATTAC+AGG | + | chr2_2:22647347-22647366 | None:intergenic | 45.0% | |
AACACAGATGGAACATGCAG+GGG | + | chr2_2:22647359-22647378 | None:intergenic | 45.0% | |
CAACACAGATGGAACATGCA+GGG | + | chr2_2:22647360-22647379 | None:intergenic | 45.0% | |
AGAGTCCACATTTCTTGCCA+TGG | - | chr2_2:22647501-22647520 | Msa0244380:CDS | 45.0% | |
GGTAAAGAAGTGGGGAAAAC+AGG | + | chr2_2:22647780-22647799 | None:intergenic | 45.0% | |
!! | AGTAAAAAAAAATAATAAAA+AGG | + | chr2_2:22646586-22646605 | None:intergenic | 5.0% |
!! | TTAATAATAAACAAATTATA+GGG | + | chr2_2:22647637-22647656 | None:intergenic | 5.0% |
!! | TTTAATAATAAACAAATTAT+AGG | + | chr2_2:22647638-22647657 | None:intergenic | 5.0% |
CCCATTTCACACACACACAG+AGG | - | chr2_2:22641211-22641230 | Msa0244380:three_prime_UTR | 50.0% | |
AAGCCTCCTAAGGCTATTCG+TGG | - | chr2_2:22642765-22642784 | Msa0244380:intron | 50.0% | |
CTCCTAAGGCTATTCGTGGA+GGG | - | chr2_2:22642769-22642788 | Msa0244380:intron | 50.0% | |
ATCCCTCCACGAATAGCCTT+AGG | + | chr2_2:22642774-22642793 | None:intergenic | 50.0% | |
GTCGTATTGAAGAAGGGGTG+GGG | - | chr2_2:22642992-22643011 | Msa0244380:intron | 50.0% | |
TCGTATTGAAGAAGGGGTGG+GGG | - | chr2_2:22642993-22643012 | Msa0244380:intron | 50.0% | |
CAGTGAGCTGCTCTCTTTGT+AGG | + | chr2_2:22643082-22643101 | None:intergenic | 50.0% | |
!!! | CTCACTGCCGTTTTGAGAAC+TGG | - | chr2_2:22643095-22643114 | Msa0244380:intron | 50.0% |
CACTCCAGATGACATGGTGA+TGG | - | chr2_2:22643778-22643797 | Msa0244380:CDS | 50.0% | |
AGGAGGAGGGTCATCTTCAA+TGG | + | chr2_2:22643880-22643899 | None:intergenic | 50.0% | |
TACCGTCTGAGGGTAGCTTT+GGG | - | chr2_2:22644134-22644153 | Msa0244380:intron | 50.0% | |
!!! | TGCCGGGGCTTTTAATTTGG+TGG | - | chr2_2:22644514-22644533 | Msa0244380:intron | 50.0% |
CAAGTACAACTGCCCACATG+AGG | + | chr2_2:22644780-22644799 | None:intergenic | 50.0% | |
! | GTACATGATGGTGCAGAGTG+TGG | - | chr2_2:22644862-22644881 | Msa0244380:intron | 50.0% |
!! | CAAGGAGCGCTTTACTGAAC+AGG | - | chr2_2:22645251-22645270 | Msa0244380:intron | 50.0% |
ATCCTATACTCCCCCACTGT+CGG | - | chr2_2:22645607-22645626 | Msa0244380:intron | 50.0% | |
CAGATATGAAGTGGGTGGCA+TGG | + | chr2_2:22645752-22645771 | None:intergenic | 50.0% | |
CATGCCACCCACTTCATATC+TGG | - | chr2_2:22645750-22645769 | Msa0244380:intron | 50.0% | |
ATGCCCAGATATGAAGTGGG+TGG | + | chr2_2:22645757-22645776 | None:intergenic | 50.0% | |
CCCACTTCATATCTGGGCAT+TGG | - | chr2_2:22645757-22645776 | Msa0244380:intron | 50.0% | |
AAAGATGGCCTTCCTGATGC+TGG | - | chr2_2:22646080-22646099 | Msa0244380:intron | 50.0% | |
!! | AGTACTGACCAGCATCAGGA+AGG | + | chr2_2:22646091-22646110 | None:intergenic | 50.0% |
CACTCGAACATCCCCAATCA+AGG | + | chr2_2:22646384-22646403 | None:intergenic | 50.0% | |
TGATCCCCAGAGAGTTCTTC+AGG | - | chr2_2:22646792-22646811 | Msa0244380:intron | 50.0% | |
GATCCCCAGAGAGTTCTTCA+GGG | - | chr2_2:22646793-22646812 | Msa0244380:intron | 50.0% | |
CTGTGTTCTGTGTCCTGTAC+AGG | - | chr2_2:22646833-22646852 | Msa0244380:intron | 50.0% | |
! | CTGATTGGTCAGCGTGATCA+AGG | - | chr2_2:22647186-22647205 | Msa0244380:intron | 50.0% |
CCAACACAGATGGAACATGC+AGG | + | chr2_2:22647361-22647380 | None:intergenic | 50.0% | |
CCTGCATGTTCCATCTGTGT+TGG | - | chr2_2:22647358-22647377 | Msa0244380:intron | 50.0% | |
AAAGGAATCCCTCTGGGTCT+GGG | + | chr2_2:22647580-22647599 | None:intergenic | 50.0% | |
AAAAGGAATCCCTCTGGGTC+TGG | + | chr2_2:22647581-22647600 | None:intergenic | 50.0% | |
TGCATGACAGAATCGTCGAC+AGG | - | chr2_2:22647716-22647735 | Msa0244380:five_prime_UTR | 50.0% | |
ACGGTGGACATGTGACTTCG+TGG | - | chr2_2:22641845-22641864 | Msa0244380:intron | 55.0% | |
! | CCTCCACGAATAGCCTTAGG+AGG | + | chr2_2:22642771-22642790 | None:intergenic | 55.0% |
CCTCCTAAGGCTATTCGTGG+AGG | - | chr2_2:22642768-22642787 | Msa0244380:intron | 55.0% | |
TATTGAAGAAGGGGTGGGGG+TGG | - | chr2_2:22642996-22643015 | Msa0244380:intron | 55.0% | |
ATTGAAGAAGGGGTGGGGGT+GGG | - | chr2_2:22642997-22643016 | Msa0244380:intron | 55.0% | |
GTACCGTCTGAGGGTAGCTT+TGG | - | chr2_2:22644133-22644152 | Msa0244380:intron | 55.0% | |
GTCCCAAAGCTACCCTCAGA+CGG | + | chr2_2:22644139-22644158 | None:intergenic | 55.0% | |
GCCCCGGCAATAATGCTTTG+AGG | + | chr2_2:22644503-22644522 | None:intergenic | 55.0% | |
! | GACAGTGGGGGAGTATAGGA+TGG | + | chr2_2:22645608-22645627 | None:intergenic | 55.0% |
CAACCAGCGCATATTGGGCA+AGG | + | chr2_2:22645726-22645745 | None:intergenic | 55.0% | |
TGGGGATGTTCGAGTGAGCT+TGG | - | chr2_2:22646388-22646407 | Msa0244380:intron | 55.0% | |
GGGGATGTTCGAGTGAGCTT+GGG | - | chr2_2:22646389-22646408 | Msa0244380:intron | 55.0% | |
CTGCCCTGAAGAACTCTCTG+GGG | + | chr2_2:22646799-22646818 | None:intergenic | 55.0% | |
GCTGCCCTGAAGAACTCTCT+GGG | + | chr2_2:22646800-22646819 | None:intergenic | 55.0% | |
AGCTGCCCTGAAGAACTCTC+TGG | + | chr2_2:22646801-22646820 | None:intergenic | 55.0% | |
TTGAATGGCCCAGACCCAGA+GGG | - | chr2_2:22647569-22647588 | Msa0244380:exon | 55.0% | |
TTGGTTTCCTCTGTGCGGCG+CGG | + | chr2_2:22643551-22643570 | None:intergenic | 60.0% | |
!! | CTGAGGGTAGCTTTGGGACC+CGG | - | chr2_2:22644140-22644159 | Msa0244380:intron | 60.0% |
! | AGCCGACAGTGGGGGAGTAT+AGG | + | chr2_2:22645612-22645631 | None:intergenic | 60.0% |
AGGCCTTGCCCAATATGCGC+TGG | - | chr2_2:22645720-22645739 | Msa0244380:intron | 60.0% | |
GTTGAATGGCCCAGACCCAG+AGG | - | chr2_2:22647568-22647587 | Msa0244380:exon | 60.0% | |
ATCTCGTGGCGCTTCCGCTG+AGG | - | chr2_2:22641512-22641531 | Msa0244380:three_prime_UTR | 65.0% | |
! | AAGGGGTGGGGGTGGGTTCA+GGG | - | chr2_2:22643004-22643023 | Msa0244380:intron | 65.0% |
!! | AGGGTAGCTTTGGGACCCGG+AGG | - | chr2_2:22644143-22644162 | Msa0244380:intron | 65.0% |
! | GAAGGGGTGGGGGTGGGTTC+AGG | - | chr2_2:22643003-22643022 | Msa0244380:intron | 70.0% |
GTTTCCTCTGTGCGGCGCGG+TGG | + | chr2_2:22643548-22643567 | None:intergenic | 70.0% | |
GGAACCACCGCGCCGCACAG+AGG | - | chr2_2:22643541-22643560 | Msa0244380:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 22641184 | 22647822 | 22641184 | ID=Msa0244380;Name=Msa0244380 |
chr2_2 | mRNA | 22641184 | 22647822 | 22641184 | ID=Msa0244380-mRNA-1;Parent=Msa0244380;Name=Msa0244380-mRNA-1;_AED=0.14;_eAED=0.14;_QI=239|1|1|1|0.87|0.77|9|550|320 |
chr2_2 | exon | 22641184 | 22641701 | 22641184 | ID=Msa0244380-mRNA-1:exon:8716;Parent=Msa0244380-mRNA-1 |
chr2_2 | exon | 22642152 | 22642398 | 22642152 | ID=Msa0244380-mRNA-1:exon:8715;Parent=Msa0244380-mRNA-1 |
chr2_2 | exon | 22642905 | 22643004 | 22642905 | ID=Msa0244380-mRNA-1:exon:8714;Parent=Msa0244380-mRNA-1 |
chr2_2 | exon | 22643707 | 22643809 | 22643707 | ID=Msa0244380-mRNA-1:exon:8713;Parent=Msa0244380-mRNA-1 |
chr2_2 | exon | 22644739 | 22644879 | 22644739 | ID=Msa0244380-mRNA-1:exon:8712;Parent=Msa0244380-mRNA-1 |
chr2_2 | exon | 22645024 | 22645184 | 22645024 | ID=Msa0244380-mRNA-1:exon:8711;Parent=Msa0244380-mRNA-1 |
chr2_2 | exon | 22646194 | 22646250 | 22646194 | ID=Msa0244380-mRNA-1:exon:8710;Parent=Msa0244380-mRNA-1 |
chr2_2 | exon | 22647097 | 22647171 | 22647097 | ID=Msa0244380-mRNA-1:exon:8709;Parent=Msa0244380-mRNA-1 |
chr2_2 | exon | 22647473 | 22647822 | 22647473 | ID=Msa0244380-mRNA-1:exon:8708;Parent=Msa0244380-mRNA-1 |
chr2_2 | five_prime_UTR | 22647584 | 22647822 | 22647584 | ID=Msa0244380-mRNA-1:five_prime_utr;Parent=Msa0244380-mRNA-1 |
chr2_2 | CDS | 22647473 | 22647583 | 22647473 | ID=Msa0244380-mRNA-1:cds;Parent=Msa0244380-mRNA-1 |
chr2_2 | CDS | 22647097 | 22647171 | 22647097 | ID=Msa0244380-mRNA-1:cds;Parent=Msa0244380-mRNA-1 |
chr2_2 | CDS | 22646194 | 22646250 | 22646194 | ID=Msa0244380-mRNA-1:cds;Parent=Msa0244380-mRNA-1 |
chr2_2 | CDS | 22645024 | 22645184 | 22645024 | ID=Msa0244380-mRNA-1:cds;Parent=Msa0244380-mRNA-1 |
chr2_2 | CDS | 22644739 | 22644879 | 22644739 | ID=Msa0244380-mRNA-1:cds;Parent=Msa0244380-mRNA-1 |
chr2_2 | CDS | 22643707 | 22643809 | 22643707 | ID=Msa0244380-mRNA-1:cds;Parent=Msa0244380-mRNA-1 |
chr2_2 | CDS | 22642905 | 22643004 | 22642905 | ID=Msa0244380-mRNA-1:cds;Parent=Msa0244380-mRNA-1 |
chr2_2 | CDS | 22642184 | 22642398 | 22642184 | ID=Msa0244380-mRNA-1:cds;Parent=Msa0244380-mRNA-1 |
chr2_2 | three_prime_UTR | 22642152 | 22642183 | 22642152 | ID=Msa0244380-mRNA-1:three_prime_utr;Parent=Msa0244380-mRNA-1 |
chr2_2 | three_prime_UTR | 22641184 | 22641701 | 22641184 | ID=Msa0244380-mRNA-1:three_prime_utr;Parent=Msa0244380-mRNA-1 |
Gene Sequence |
Protein sequence |